0.009258
0.005345
0.000000
0.000000
0.010691
0.000000
0.000000
0.000000
0.004445
0.000000
0.000000
0.000000
Arold, S.T.
Hoh, F.
Dumas, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.000
90.000
120.000
108.010
108.010
224.961
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
N
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
sing
Y
339
N
doub
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
UK
Biochem.J.
BIJOAK
0043
1470-8728
478
1525
1545
10.1042/BCJ20201002
33787846
Synergy and allostery in ligand binding by HIV-1 Nef.
2021
UK
Structure
STRUE6
2005
0969-2126
5
1361
1372
9351809
The crystal structure of HIV-1 Nef protein bound to the Fyn kinase SH3 domain suggests a role for this complex in altered T cell receptor signaling.
1997
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
85
931
942
8681387
Crystal structure of the conserved core of HIV-1 Nef complexed with a Src family SH3 domain.
1996
10.2210/pdb4d8d/pdb
pdb_00004d8d
100.0
1
AREA DETECTOR
2000-04-27
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.98064
1.0
BM30A
ESRF
0.98064
SYNCHROTRON
ESRF BEAMLINE BM30A
6652.212
Tyrosine-protein kinase Fyn
2.7.10.2
SRC-HOMOLOGY 3 DOMAIN (UNP Residues 84-141)
R96W
2
man
polymer
17568.723
Protein Nef
CONSERVED CORE DOMAIN (UNP Residues 58-204)
2
man
polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
44
nat
water
Proto-oncogene Syn, Proto-oncogene c-Fyn, Src-like kinase, SLK, p59-Fyn
3'ORF, Negative factor, F-protein, C-terminal core protein
no
no
VTLFVALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV
VTLFVALYDYEAWTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV
A,C
polypeptide(L)
no
no
GSLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGVRY
PLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC
GSLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGVRY
PLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFKNC
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
FYN, FYN TYROSINE KINASE
9606
Homo sapiens
562
Escherichia coli
BL21 (DE3)
pGEX-2T
HIV-1
LAI-BRU ISOLATE
sample
nef
11686
Human immunodeficiency virus type 1
562
Escherichia coli
BL21 (DE3)
PGEX-2T
1
3.95
68.82
VAPOR DIFFUSION, HANGING DROP
8.4
0.3 M sodium potassium tartrate, 0.5 M bicine buffer , 1cmc D-octylglucopyranoside, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
citation_author
citation
citation_author
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Database references
Database references
Derived calculations
Data collection
Refinement description
1
0
2013-01-16
1
1
2018-01-24
1
2
2021-10-20
1
3
2023-09-13
_citation_author.name
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-01-10
REL
REL
GOL
GLYCEROL
HOH
water
1AVZ
PDB ENTRY 1AVZ
PDB
experimental model
GOL
3
3
GOL
GOL
201
C
HOH
43
4
HOH
HOH
201
A
HOH
4
4
HOH
HOH
301
B
HOH
5
4
HOH
HOH
302
B
HOH
7
4
HOH
HOH
303
B
HOH
11
4
HOH
HOH
304
B
HOH
14
4
HOH
HOH
305
B
HOH
15
4
HOH
HOH
306
B
HOH
16
4
HOH
HOH
307
B
HOH
17
4
HOH
HOH
308
B
HOH
18
4
HOH
HOH
309
B
HOH
19
4
HOH
HOH
310
B
HOH
21
4
HOH
HOH
311
B
HOH
22
4
HOH
HOH
312
B
HOH
27
4
HOH
HOH
313
B
HOH
32
4
HOH
HOH
314
B
HOH
34
4
HOH
HOH
315
B
HOH
36
4
HOH
HOH
316
B
HOH
37
4
HOH
HOH
317
B
HOH
40
4
HOH
HOH
318
B
HOH
41
4
HOH
HOH
319
B
HOH
8
4
HOH
HOH
301
C
HOH
12
4
HOH
HOH
302
C
HOH
29
4
HOH
HOH
303
C
HOH
42
4
HOH
HOH
304
C
HOH
1
4
HOH
HOH
301
D
HOH
2
4
HOH
HOH
302
D
HOH
3
4
HOH
HOH
303
D
HOH
6
4
HOH
HOH
304
D
HOH
9
4
HOH
HOH
305
D
HOH
10
4
HOH
HOH
306
D
HOH
13
4
HOH
HOH
307
D
HOH
20
4
HOH
HOH
308
D
HOH
23
4
HOH
HOH
309
D
HOH
24
4
HOH
HOH
310
D
HOH
25
4
HOH
HOH
311
D
HOH
26
4
HOH
HOH
312
D
HOH
28
4
HOH
HOH
313
D
HOH
30
4
HOH
HOH
314
D
HOH
31
4
HOH
HOH
315
D
HOH
33
4
HOH
HOH
316
D
HOH
35
4
HOH
HOH
317
D
HOH
38
4
HOH
HOH
318
D
HOH
39
4
HOH
HOH
319
D
HOH
44
4
HOH
HOH
320
D
n
1
84
A
THR
85
n
2
THR
85
A
LEU
86
n
3
LEU
86
A
PHE
87
n
4
PHE
87
A
VAL
88
n
5
VAL
88
A
ALA
89
n
6
ALA
89
A
LEU
90
n
7
LEU
90
A
TYR
91
n
8
TYR
91
A
ASP
92
n
9
ASP
92
A
TYR
93
n
10
TYR
93
A
GLU
94
n
11
GLU
94
A
ALA
95
n
12
ALA
95
A
TRP
96
n
13
TRP
96
A
THR
97
n
14
THR
97
A
GLU
98
n
15
GLU
98
A
ASP
99
n
16
ASP
99
A
ASP
100
n
17
ASP
100
A
LEU
101
n
18
LEU
101
A
SER
102
n
19
SER
102
A
PHE
103
n
20
PHE
103
A
HIS
104
n
21
HIS
104
A
LYS
105
n
22
LYS
105
A
GLY
106
n
23
GLY
106
A
GLU
107
n
24
GLU
107
A
LYS
108
n
25
LYS
108
A
PHE
109
n
26
PHE
109
A
GLN
110
n
27
GLN
110
A
ILE
111
n
28
ILE
111
A
LEU
112
n
29
LEU
112
A
ASN
113
n
30
ASN
113
A
SER
114
n
31
SER
114
A
SER
115
n
32
SER
115
A
GLU
116
n
33
GLU
116
A
GLY
117
n
34
GLY
117
A
ASP
118
n
35
ASP
118
A
TRP
119
n
36
TRP
119
A
TRP
120
n
37
TRP
120
A
GLU
121
n
38
GLU
121
A
ALA
122
n
39
ALA
122
A
ARG
123
n
40
ARG
123
A
SER
124
n
41
SER
124
A
LEU
125
n
42
LEU
125
A
THR
126
n
43
THR
126
A
THR
127
n
44
THR
127
A
GLY
128
n
45
GLY
128
A
GLU
129
n
46
GLU
129
A
THR
130
n
47
THR
130
A
GLY
131
n
48
GLY
131
A
TYR
132
n
49
TYR
132
A
ILE
133
n
50
ILE
133
A
PRO
134
n
51
PRO
134
A
SER
135
n
52
SER
135
A
ASN
136
n
53
ASN
136
A
TYR
137
n
54
TYR
137
A
VAL
138
n
55
VAL
138
A
ALA
139
n
56
ALA
139
A
PRO
140
n
57
PRO
140
A
VAL
141
n
58
VAL
141
A
n
1
56
B
n
2
57
B
n
3
58
B
n
4
59
B
n
5
60
B
n
6
61
B
n
7
62
B
n
8
63
B
n
9
64
B
n
10
65
B
n
11
66
B
n
12
67
B
n
13
68
B
PRO
69
n
14
PRO
69
B
VAL
70
n
15
VAL
70
B
THR
71
n
16
THR
71
B
PRO
72
n
17
PRO
72
B
GLN
73
n
18
GLN
73
B
VAL
74
n
19
VAL
74
B
PRO
75
n
20
PRO
75
B
LEU
76
n
21
LEU
76
B
ARG
77
n
22
ARG
77
B
PRO
78
n
23
PRO
78
B
MET
79
n
24
MET
79
B
THR
80
n
25
THR
80
B
TYR
81
n
26
TYR
81
B
LYS
82
n
27
LYS
82
B
ALA
83
n
28
ALA
83
B
ALA
84
n
29
ALA
84
B
VAL
85
n
30
VAL
85
B
ASP
86
n
31
ASP
86
B
LEU
87
n
32
LEU
87
B
SER
88
n
33
SER
88
B
HIS
89
n
34
HIS
89
B
PHE
90
n
35
PHE
90
B
LEU
91
n
36
LEU
91
B
LYS
92
n
37
LYS
92
B
GLU
93
n
38
GLU
93
B
LYS
94
n
39
LYS
94
B
GLY
95
n
40
GLY
95
B
GLY
96
n
41
GLY
96
B
LEU
97
n
42
LEU
97
B
GLU
98
n
43
GLU
98
B
GLY
99
n
44
GLY
99
B
LEU
100
n
45
LEU
100
B
ILE
101
n
46
ILE
101
B
HIS
102
n
47
HIS
102
B
SER
103
n
48
SER
103
B
GLN
104
n
49
GLN
104
B
ARG
105
n
50
ARG
105
B
ARG
106
n
51
ARG
106
B
GLN
107
n
52
GLN
107
B
ASP
108
n
53
ASP
108
B
ILE
109
n
54
ILE
109
B
LEU
110
n
55
LEU
110
B
ASP
111
n
56
ASP
111
B
LEU
112
n
57
LEU
112
B
TRP
113
n
58
TRP
113
B
ILE
114
n
59
ILE
114
B
TYR
115
n
60
TYR
115
B
HIS
116
n
61
HIS
116
B
THR
117
n
62
THR
117
B
GLN
118
n
63
GLN
118
B
GLY
119
n
64
GLY
119
B
TYR
120
n
65
TYR
120
B
PHE
121
n
66
PHE
121
B
PRO
122
n
67
PRO
122
B
ASP
123
n
68
ASP
123
B
TRP
124
n
69
TRP
124
B
GLN
125
n
70
GLN
125
B
ASN
126
n
71
ASN
126
B
TYR
127
n
72
TYR
127
B
THR
128
n
73
THR
128
B
PRO
129
n
74
PRO
129
B
GLY
130
n
75
GLY
130
B
PRO
131
n
76
PRO
131
B
GLY
132
n
77
GLY
132
B
VAL
133
n
78
VAL
133
B
ARG
134
n
79
ARG
134
B
TYR
135
n
80
TYR
135
B
PRO
136
n
81
PRO
136
B
LEU
137
n
82
LEU
137
B
THR
138
n
83
THR
138
B
PHE
139
n
84
PHE
139
B
GLY
140
n
85
GLY
140
B
TRP
141
n
86
TRP
141
B
CYS
142
n
87
CYS
142
B
TYR
143
n
88
TYR
143
B
LYS
144
n
89
LYS
144
B
LEU
145
n
90
LEU
145
B
VAL
146
n
91
VAL
146
B
PRO
147
n
92
PRO
147
B
VAL
148
n
93
VAL
148
B
n
94
149
B
n
95
150
B
n
96
151
B
n
97
152
B
n
98
153
B
n
99
154
B
n
100
155
B
n
101
156
B
n
102
157
B
n
103
158
B
n
104
159
B
n
105
160
B
n
106
161
B
n
107
162
B
n
108
163
B
n
109
164
B
n
110
165
B
n
111
166
B
n
112
167
B
n
113
168
B
n
114
169
B
n
115
170
B
n
116
171
B
n
117
172
B
n
118
173
B
n
119
174
B
n
120
175
B
n
121
176
B
n
122
177
B
n
123
178
B
GLU
179
n
124
GLU
179
B
VAL
180
n
125
VAL
180
B
LEU
181
n
126
LEU
181
B
GLU
182
n
127
GLU
182
B
TRP
183
n
128
TRP
183
B
ARG
184
n
129
ARG
184
B
PHE
185
n
130
PHE
185
B
ASP
186
n
131
ASP
186
B
SER
187
n
132
SER
187
B
ARG
188
n
133
ARG
188
B
LEU
189
n
134
LEU
189
B
ALA
190
n
135
ALA
190
B
PHE
191
n
136
PHE
191
B
HIS
192
n
137
HIS
192
B
HIS
193
n
138
HIS
193
B
VAL
194
n
139
VAL
194
B
ALA
195
n
140
ALA
195
B
ARG
196
n
141
ARG
196
B
GLU
197
n
142
GLU
197
B
LEU
198
n
143
LEU
198
B
HIS
199
n
144
HIS
199
B
PRO
200
n
145
PRO
200
B
GLU
201
n
146
GLU
201
B
TYR
202
n
147
TYR
202
B
PHE
203
n
148
PHE
203
B
LYS
204
n
149
LYS
204
B
n
150
205
B
n
151
206
B
VAL
84
n
1
VAL
84
C
THR
85
n
2
THR
85
C
LEU
86
n
3
LEU
86
C
PHE
87
n
4
PHE
87
C
VAL
88
n
5
VAL
88
C
ALA
89
n
6
ALA
89
C
LEU
90
n
7
LEU
90
C
TYR
91
n
8
TYR
91
C
ASP
92
n
9
ASP
92
C
TYR
93
n
10
TYR
93
C
GLU
94
n
11
GLU
94
C
ALA
95
n
12
ALA
95
C
TRP
96
n
13
TRP
96
C
THR
97
n
14
THR
97
C
GLU
98
n
15
GLU
98
C
ASP
99
n
16
ASP
99
C
ASP
100
n
17
ASP
100
C
LEU
101
n
18
LEU
101
C
SER
102
n
19
SER
102
C
PHE
103
n
20
PHE
103
C
HIS
104
n
21
HIS
104
C
LYS
105
n
22
LYS
105
C
GLY
106
n
23
GLY
106
C
GLU
107
n
24
GLU
107
C
LYS
108
n
25
LYS
108
C
PHE
109
n
26
PHE
109
C
GLN
110
n
27
GLN
110
C
ILE
111
n
28
ILE
111
C
LEU
112
n
29
LEU
112
C
ASN
113
n
30
ASN
113
C
SER
114
n
31
SER
114
C
SER
115
n
32
SER
115
C
GLU
116
n
33
GLU
116
C
GLY
117
n
34
GLY
117
C
ASP
118
n
35
ASP
118
C
TRP
119
n
36
TRP
119
C
TRP
120
n
37
TRP
120
C
GLU
121
n
38
GLU
121
C
ALA
122
n
39
ALA
122
C
ARG
123
n
40
ARG
123
C
SER
124
n
41
SER
124
C
LEU
125
n
42
LEU
125
C
THR
126
n
43
THR
126
C
THR
127
n
44
THR
127
C
GLY
128
n
45
GLY
128
C
GLU
129
n
46
GLU
129
C
THR
130
n
47
THR
130
C
GLY
131
n
48
GLY
131
C
TYR
132
n
49
TYR
132
C
ILE
133
n
50
ILE
133
C
PRO
134
n
51
PRO
134
C
SER
135
n
52
SER
135
C
ASN
136
n
53
ASN
136
C
TYR
137
n
54
TYR
137
C
VAL
138
n
55
VAL
138
C
ALA
139
n
56
ALA
139
C
PRO
140
n
57
PRO
140
C
VAL
141
n
58
VAL
141
C
n
1
56
D
n
2
57
D
n
3
58
D
n
4
59
D
n
5
60
D
n
6
61
D
n
7
62
D
n
8
63
D
n
9
64
D
n
10
65
D
n
11
66
D
n
12
67
D
n
13
68
D
n
14
69
D
VAL
70
n
15
VAL
70
D
THR
71
n
16
THR
71
D
PRO
72
n
17
PRO
72
D
GLN
73
n
18
GLN
73
D
VAL
74
n
19
VAL
74
D
PRO
75
n
20
PRO
75
D
LEU
76
n
21
LEU
76
D
ARG
77
n
22
ARG
77
D
PRO
78
n
23
PRO
78
D
MET
79
n
24
MET
79
D
THR
80
n
25
THR
80
D
TYR
81
n
26
TYR
81
D
LYS
82
n
27
LYS
82
D
ALA
83
n
28
ALA
83
D
ALA
84
n
29
ALA
84
D
VAL
85
n
30
VAL
85
D
ASP
86
n
31
ASP
86
D
LEU
87
n
32
LEU
87
D
SER
88
n
33
SER
88
D
HIS
89
n
34
HIS
89
D
PHE
90
n
35
PHE
90
D
LEU
91
n
36
LEU
91
D
LYS
92
n
37
LYS
92
D
GLU
93
n
38
GLU
93
D
LYS
94
n
39
LYS
94
D
GLY
95
n
40
GLY
95
D
GLY
96
n
41
GLY
96
D
LEU
97
n
42
LEU
97
D
GLU
98
n
43
GLU
98
D
GLY
99
n
44
GLY
99
D
LEU
100
n
45
LEU
100
D
ILE
101
n
46
ILE
101
D
HIS
102
n
47
HIS
102
D
SER
103
n
48
SER
103
D
GLN
104
n
49
GLN
104
D
ARG
105
n
50
ARG
105
D
ARG
106
n
51
ARG
106
D
GLN
107
n
52
GLN
107
D
ASP
108
n
53
ASP
108
D
ILE
109
n
54
ILE
109
D
LEU
110
n
55
LEU
110
D
ASP
111
n
56
ASP
111
D
LEU
112
n
57
LEU
112
D
TRP
113
n
58
TRP
113
D
ILE
114
n
59
ILE
114
D
TYR
115
n
60
TYR
115
D
HIS
116
n
61
HIS
116
D
THR
117
n
62
THR
117
D
GLN
118
n
63
GLN
118
D
GLY
119
n
64
GLY
119
D
TYR
120
n
65
TYR
120
D
PHE
121
n
66
PHE
121
D
PRO
122
n
67
PRO
122
D
ASP
123
n
68
ASP
123
D
TRP
124
n
69
TRP
124
D
GLN
125
n
70
GLN
125
D
ASN
126
n
71
ASN
126
D
TYR
127
n
72
TYR
127
D
THR
128
n
73
THR
128
D
PRO
129
n
74
PRO
129
D
GLY
130
n
75
GLY
130
D
PRO
131
n
76
PRO
131
D
GLY
132
n
77
GLY
132
D
VAL
133
n
78
VAL
133
D
ARG
134
n
79
ARG
134
D
TYR
135
n
80
TYR
135
D
PRO
136
n
81
PRO
136
D
LEU
137
n
82
LEU
137
D
THR
138
n
83
THR
138
D
PHE
139
n
84
PHE
139
D
GLY
140
n
85
GLY
140
D
TRP
141
n
86
TRP
141
D
CYS
142
n
87
CYS
142
D
TYR
143
n
88
TYR
143
D
LYS
144
n
89
LYS
144
D
LEU
145
n
90
LEU
145
D
VAL
146
n
91
VAL
146
D
PRO
147
n
92
PRO
147
D
VAL
148
n
93
VAL
148
D
n
94
149
D
n
95
150
D
n
96
151
D
n
97
152
D
n
98
153
D
n
99
154
D
n
100
155
D
n
101
156
D
n
102
157
D
n
103
158
D
n
104
159
D
n
105
160
D
n
106
161
D
n
107
162
D
n
108
163
D
n
109
164
D
n
110
165
D
n
111
166
D
n
112
167
D
n
113
168
D
n
114
169
D
n
115
170
D
n
116
171
D
n
117
172
D
n
118
173
D
n
119
174
D
n
120
175
D
n
121
176
D
n
122
177
D
n
123
178
D
GLU
179
n
124
GLU
179
D
VAL
180
n
125
VAL
180
D
LEU
181
n
126
LEU
181
D
GLU
182
n
127
GLU
182
D
TRP
183
n
128
TRP
183
D
ARG
184
n
129
ARG
184
D
PHE
185
n
130
PHE
185
D
ASP
186
n
131
ASP
186
D
SER
187
n
132
SER
187
D
ARG
188
n
133
ARG
188
D
LEU
189
n
134
LEU
189
D
ALA
190
n
135
ALA
190
D
PHE
191
n
136
PHE
191
D
HIS
192
n
137
HIS
192
D
HIS
193
n
138
HIS
193
D
VAL
194
n
139
VAL
194
D
ALA
195
n
140
ALA
195
D
ARG
196
n
141
ARG
196
D
GLU
197
n
142
GLU
197
D
LEU
198
n
143
LEU
198
D
HIS
199
n
144
HIS
199
D
PRO
200
n
145
PRO
200
D
GLU
201
n
146
GLU
201
D
TYR
202
n
147
TYR
202
D
PHE
203
n
148
PHE
203
D
LYS
204
n
149
LYS
204
D
n
150
205
D
n
151
206
D
3.7194
-0.5358
2.8642
1.3958
-0.1362
2.5747
-0.4312
-1.9038
-0.7757
0.8378
0.2993
0.2364
-0.1309
-0.5111
0.1392
0.8715
0.3791
0.2920
0.9618
0.3670
0.8262
refined
13.6345
28.6008
57.3543
X-RAY DIFFRACTION
2.6123
3.2491
1.0476
7.4266
1.2014
7.1606
-0.9136
-1.1768
0.9126
0.6865
0.3909
1.1122
-0.5725
-1.2815
0.4792
0.6714
0.2489
0.2251
0.9895
0.2353
0.8820
refined
12.6009
34.4546
53.2890
X-RAY DIFFRACTION
5.3597
-4.4464
-1.6284
4.3862
3.8996
9.8077
0.4124
0.5338
-0.0826
-0.4127
-1.0175
0.6959
-0.7889
-1.1086
0.4488
0.7280
0.1299
0.2843
1.0134
0.2236
1.0696
refined
8.9702
31.6789
49.3837
X-RAY DIFFRACTION
5.0665
-1.1682
-0.6255
2.6896
2.4391
2.2525
-0.0819
-0.9063
-0.1468
-0.0302
-0.6561
0.5831
0.7859
0.4047
0.6681
0.6907
0.1720
0.2175
0.9635
0.3083
0.7510
refined
12.7163
27.7121
52.6363
X-RAY DIFFRACTION
6.2853
-1.0737
0.9514
2.4220
-1.2196
5.1575
-0.4995
-0.8915
0.0938
0.8032
0.1491
-1.1150
-0.3855
-0.5405
0.2266
0.5920
0.1575
-0.1001
0.4369
0.1463
0.5671
refined
27.9377
39.2824
44.9893
X-RAY DIFFRACTION
2.0411
2.6774
-1.1161
6.0546
-0.2235
3.2334
-0.5584
-0.6232
0.5621
0.5164
0.2399
-0.7852
-0.3594
0.2122
0.5152
0.5742
0.1311
-0.0666
0.4783
0.0720
0.6648
refined
34.4250
33.2029
46.1702
X-RAY DIFFRACTION
0.7360
-0.8962
0.1412
3.8811
-0.9473
1.6701
-0.0746
0.2869
0.3517
-0.3084
-0.5541
-1.6464
0.0291
0.6817
0.3736
0.5414
0.2107
0.2520
0.4561
0.5794
1.0659
refined
34.3620
40.0440
35.0611
X-RAY DIFFRACTION
7.6260
-1.4916
2.0927
0.3251
-0.1408
2.6699
-0.3337
0.5353
1.3711
0.1527
-0.5953
-1.7021
-0.5959
1.0161
0.8612
0.5710
-0.0497
-0.0892
0.6068
0.3408
1.4331
refined
37.5404
48.2146
37.4739
X-RAY DIFFRACTION
1.7548
0.2308
0.5952
4.5284
-1.8751
2.3551
-0.1728
0.1124
-0.4653
-0.3694
-0.0913
0.0101
1.2337
0.8449
0.3254
0.8788
0.5730
0.3235
0.5343
0.4385
0.7084
refined
31.8731
41.0553
24.2150
X-RAY DIFFRACTION
8.6185
-4.7084
-4.8863
7.8245
0.4393
3.7189
-0.1803
-0.3699
0.3702
0.1864
0.1601
0.1884
-0.4126
-1.6028
0.1170
0.5751
0.2744
0.2835
0.6441
0.1199
0.4017
refined
36.7217
14.3331
66.1844
X-RAY DIFFRACTION
8.2803
0.6992
3.9702
4.8654
0.0162
7.5096
0.1352
0.4128
0.0735
-0.7279
-0.2245
0.2035
0.8034
-0.1414
0.0507
0.7584
0.0535
0.1947
0.3510
0.0482
0.4351
refined
41.1851
10.9553
61.8764
X-RAY DIFFRACTION
4.6161
-2.6289
2.8967
3.6066
-4.8254
6.7851
0.1852
0.3445
0.5894
-0.6303
-0.7699
-1.2348
-0.2187
-0.3593
0.5088
0.7766
0.0349
0.2180
0.5028
0.0289
0.4736
refined
45.7479
14.2755
64.4086
X-RAY DIFFRACTION
5.9285
-4.1012
3.9567
7.1295
-0.7332
4.3855
0.7877
0.4502
0.1769
-0.1763
-0.5766
-0.5644
-0.7442
-1.0370
-0.2306
0.6703
0.0620
0.2199
0.4248
0.0376
0.5161
refined
40.0297
16.9332
64.3806
X-RAY DIFFRACTION
8.7390
-2.4551
-1.6399
6.4829
4.4156
6.7005
-0.1614
-0.5810
-1.0836
0.1831
0.3809
0.9740
-0.2845
-0.5521
-0.0595
0.6859
0.2337
0.2245
0.4145
0.2239
0.5689
refined
41.8388
13.7961
47.7000
X-RAY DIFFRACTION
6.2433
-1.2832
2.6378
4.1664
-0.8156
1.8091
0.4169
0.5158
-1.0901
0.1294
0.0832
0.8943
0.2852
-0.2608
-0.4189
0.5702
0.1594
0.0159
0.3485
0.0262
0.7256
refined
34.6073
17.4516
38.6828
X-RAY DIFFRACTION
4.4078
-0.5615
0.2691
1.1877
-0.2251
0.0456
0.3374
1.1148
0.2063
-0.7647
-0.4364
0.3172
-0.6993
0.0439
-0.0280
0.9792
0.3054
0.1011
0.4793
0.1191
0.3495
refined
45.1973
18.5839
34.5336
X-RAY DIFFRACTION
7.7657
-2.6211
0.9283
6.3992
-2.1313
2.1277
0.9645
1.7477
-0.3420
-0.8706
-0.7544
0.9550
0.0459
-0.5542
-0.1166
0.7151
0.3832
0.0063
0.7049
-0.2367
0.4585
refined
43.4143
11.3606
29.1744
X-RAY DIFFRACTION
8.4226
0.4279
1.7140
6.2249
-5.5921
5.5498
0.3760
1.7154
1.6301
-1.2478
-0.4840
-0.9344
-0.7623
0.5270
0.1482
0.8938
0.2143
0.2284
0.7648
0.3204
0.7651
refined
56.1251
21.4596
32.8642
X-RAY DIFFRACTION
A
85
A
94
X-RAY DIFFRACTION
1
chain 'A' and (resseq 85:94)
A
95
A
113
X-RAY DIFFRACTION
2
chain 'A' and (resseq 95:113)
A
114
A
129
X-RAY DIFFRACTION
3
chain 'A' and (resseq 114:129)
A
130
A
141
X-RAY DIFFRACTION
4
chain 'A' and (resseq 130:141)
B
69
B
103
X-RAY DIFFRACTION
5
chain 'B' and (resseq 69:103)
B
104
B
118
X-RAY DIFFRACTION
6
chain 'B' and (resseq 104:118)
B
119
B
147
X-RAY DIFFRACTION
7
chain 'B' and (resseq 119:147)
B
148
B
190
X-RAY DIFFRACTION
8
chain 'B' and (resseq 148:190)
B
191
B
204
X-RAY DIFFRACTION
9
chain 'B' and (resseq 191:204)
C
84
C
94
X-RAY DIFFRACTION
10
chain 'C' and (resseq 84:94)
C
95
C
113
X-RAY DIFFRACTION
11
chain 'C' and (resseq 95:113)
C
114
C
129
X-RAY DIFFRACTION
12
chain 'C' and (resseq 114:129)
C
130
C
141
X-RAY DIFFRACTION
13
chain 'C' and (resseq 130:141)
D
70
D
94
X-RAY DIFFRACTION
14
chain 'D' and (resseq 70:94)
D
95
D
118
X-RAY DIFFRACTION
15
chain 'D' and (resseq 95:118)
D
119
D
147
X-RAY DIFFRACTION
16
chain 'D' and (resseq 119:147)
D
148
D
190
X-RAY DIFFRACTION
17
chain 'D' and (resseq 148:190)
D
191
D
204
X-RAY DIFFRACTION
18
chain 'D' and (resseq 191:204)
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
2
dimeric
1250
-8
9320
1600
-8
9210
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
131
A
O
GLY
48
A
N
ALA
122
A
N
ALA
39
A
O
GLU
121
A
O
GLU
38
A
N
LEU
112
A
N
LEU
29
A
O
PHE
109
A
O
PHE
26
A
N
PHE
87
A
N
PHE
4
A
N
VAL
88
A
N
VAL
5
A
O
ALA
139
A
O
ALA
56
B
N
VAL
146
B
N
VAL
91
B
O
GLU
182
B
O
GLU
127
C
O
GLY
131
C
O
GLY
48
C
N
ALA
122
C
N
ALA
39
C
O
GLU
121
C
O
GLU
38
C
N
LEU
112
C
N
LEU
29
C
O
PHE
109
C
O
PHE
26
C
N
PHE
87
C
N
PHE
4
C
N
VAL
88
C
N
VAL
5
C
O
ALA
139
C
O
ALA
56
D
N
VAL
146
D
N
VAL
91
D
O
GLU
182
D
O
GLU
127
1
B
HOH
306
G
HOH
1
A
VAL
84
A
VAL
1
1
Y
1
B
GLY
56
B
GLY
1
1
Y
1
B
SER
57
B
SER
2
1
Y
1
B
LEU
58
B
LEU
3
1
Y
1
B
GLU
59
B
GLU
4
1
Y
1
B
ALA
60
B
ALA
5
1
Y
1
B
GLN
61
B
GLN
6
1
Y
1
B
GLU
62
B
GLU
7
1
Y
1
B
GLU
63
B
GLU
8
1
Y
1
B
GLU
64
B
GLU
9
1
Y
1
B
GLU
65
B
GLU
10
1
Y
1
B
VAL
66
B
VAL
11
1
Y
1
B
GLY
67
B
GLY
12
1
Y
1
B
PHE
68
B
PHE
13
1
Y
1
B
GLU
149
B
GLU
94
1
Y
1
B
PRO
150
B
PRO
95
1
Y
1
B
ASP
151
B
ASP
96
1
Y
1
B
LYS
152
B
LYS
97
1
Y
1
B
VAL
153
B
VAL
98
1
Y
1
B
GLU
154
B
GLU
99
1
Y
1
B
GLU
155
B
GLU
100
1
Y
1
B
ALA
156
B
ALA
101
1
Y
1
B
ASN
157
B
ASN
102
1
Y
1
B
LYS
158
B
LYS
103
1
Y
1
B
GLY
159
B
GLY
104
1
Y
1
B
GLU
160
B
GLU
105
1
Y
1
B
ASN
161
B
ASN
106
1
Y
1
B
THR
162
B
THR
107
1
Y
1
B
SER
163
B
SER
108
1
Y
1
B
LEU
164
B
LEU
109
1
Y
1
B
LEU
165
B
LEU
110
1
Y
1
B
HIS
166
B
HIS
111
1
Y
1
B
PRO
167
B
PRO
112
1
Y
1
B
VAL
168
B
VAL
113
1
Y
1
B
SER
169
B
SER
114
1
Y
1
B
LEU
170
B
LEU
115
1
Y
1
B
HIS
171
B
HIS
116
1
Y
1
B
GLY
172
B
GLY
117
1
Y
1
B
MET
173
B
MET
118
1
Y
1
B
ASP
174
B
ASP
119
1
Y
1
B
ASP
175
B
ASP
120
1
Y
1
B
PRO
176
B
PRO
121
1
Y
1
B
GLU
177
B
GLU
122
1
Y
1
B
ARG
178
B
ARG
123
1
Y
1
B
ASN
205
B
ASN
150
1
Y
1
B
CYS
206
B
CYS
151
1
Y
1
D
GLY
56
D
GLY
1
1
Y
1
D
SER
57
D
SER
2
1
Y
1
D
LEU
58
D
LEU
3
1
Y
1
D
GLU
59
D
GLU
4
1
Y
1
D
ALA
60
D
ALA
5
1
Y
1
D
GLN
61
D
GLN
6
1
Y
1
D
GLU
62
D
GLU
7
1
Y
1
D
GLU
63
D
GLU
8
1
Y
1
D
GLU
64
D
GLU
9
1
Y
1
D
GLU
65
D
GLU
10
1
Y
1
D
VAL
66
D
VAL
11
1
Y
1
D
GLY
67
D
GLY
12
1
Y
1
D
PHE
68
D
PHE
13
1
Y
1
D
PRO
69
D
PRO
14
1
Y
1
D
GLU
149
D
GLU
94
1
Y
1
D
PRO
150
D
PRO
95
1
Y
1
D
ASP
151
D
ASP
96
1
Y
1
D
LYS
152
D
LYS
97
1
Y
1
D
VAL
153
D
VAL
98
1
Y
1
D
GLU
154
D
GLU
99
1
Y
1
D
GLU
155
D
GLU
100
1
Y
1
D
ALA
156
D
ALA
101
1
Y
1
D
ASN
157
D
ASN
102
1
Y
1
D
LYS
158
D
LYS
103
1
Y
1
D
GLY
159
D
GLY
104
1
Y
1
D
GLU
160
D
GLU
105
1
Y
1
D
ASN
161
D
ASN
106
1
Y
1
D
THR
162
D
THR
107
1
Y
1
D
SER
163
D
SER
108
1
Y
1
D
LEU
164
D
LEU
109
1
Y
1
D
LEU
165
D
LEU
110
1
Y
1
D
HIS
166
D
HIS
111
1
Y
1
D
PRO
167
D
PRO
112
1
Y
1
D
VAL
168
D
VAL
113
1
Y
1
D
SER
169
D
SER
114
1
Y
1
D
LEU
170
D
LEU
115
1
Y
1
D
HIS
171
D
HIS
116
1
Y
1
D
GLY
172
D
GLY
117
1
Y
1
D
MET
173
D
MET
118
1
Y
1
D
ASP
174
D
ASP
119
1
Y
1
D
ASP
175
D
ASP
120
1
Y
1
D
PRO
176
D
PRO
121
1
Y
1
D
GLU
177
D
GLU
122
1
Y
1
D
ARG
178
D
ARG
123
1
Y
1
D
ASN
205
D
ASN
150
1
Y
1
D
CYS
206
D
CYS
151
1
Y
1
B
GLN
125
-100.21
56.12
1
B
GLU
201
-67.25
6.13
176.650
83.2870
34.240
-6.1391
-0.0000
-0.0000
-6.1391
0.0000
12.2782
0.2376
0.2121
0.2135
2.5201
52.5130
1350
27024
26778
5.0400
99.1
1.000
1.000
0.8259
0.3700
RANDOM
1
THROUGHOUT
1.400
0.0
MOLECULAR REPLACEMENT
23.5000
0.7300
1.0000
PDB ENTRY 1AVZ
ML
FLAT BULK SOLVENT MODEL
68.4210
0.3460
2.5201
52.5130
44
2774
6
0
2724
0.007
2830
0.977
3860
0.070
391
0.005
490
13.947
1000
0.3414
0.3377
2.6102
110
2407
2517
10
96.0000
0.3421
0.2825
2.7147
132
2510
2642
10
99.0000
0.2893
0.2593
2.8382
133
2483
2616
10
99.0000
0.2872
0.2242
2.9878
157
2449
2606
10
99.0000
0.2658
0.2177
3.1750
125
2505
2630
10
99.0000
0.2636
0.2154
3.4201
125
2536
2661
10
100.0000
0.2434
0.1992
3.7642
120
2577
2697
10
100.0000
0.2265
0.1859
4.3087
156
2558
2714
10
100.0000
0.1923
0.1753
5.4276
141
2630
2771
10
100.0000
0.2268
0.2315
52.5244
151
2773
2924
10
99.0000
73.990
2.52
58.51
4D8D
27024
26791
0.0
0.0
0.067
1
7.4
99.14
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.3_928
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data reduction
MOSFLM
data scaling
SCALA
phasing
MOLREP
Crystal structure of HIV-1 NEF Fyn-SH3 R96W variant
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
B
THR
80
B
THR
25
HELX_P
B
GLY
95
B
GLY
40
1
1
16
B
SER
103
B
SER
48
HELX_P
B
GLY
119
B
GLY
64
1
2
17
B
SER
187
B
SER
132
HELX_P
B
PHE
191
B
PHE
136
5
3
5
B
HIS
193
B
HIS
138
HELX_P
B
HIS
199
B
HIS
144
1
4
7
B
PRO
200
B
PRO
145
HELX_P
B
PHE
203
B
PHE
148
5
5
4
D
THR
80
D
THR
25
HELX_P
D
GLY
95
D
GLY
40
1
6
16
D
SER
103
D
SER
48
HELX_P
D
GLY
119
D
GLY
64
1
7
17
D
SER
187
D
SER
132
HELX_P
D
PHE
191
D
PHE
136
5
8
5
D
HIS
193
D
HIS
138
HELX_P
D
HIS
199
D
HIS
144
1
9
7
D
PRO
200
D
PRO
145
HELX_P
D
PHE
203
D
PHE
148
5
10
4
TRANSFERASE/PROTEIN BINDING
signaling molecules, TRANSFERASE-PROTEIN BINDING complex
B
GLY
130
B
GLY
75
1
B
PRO
131
B
PRO
76
0.65
D
GLY
130
D
GLY
75
1
D
PRO
131
D
PRO
76
-0.90
FYN_HUMAN
UNP
1
84
P06241
VTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV
NEF_HV1BR
UNP
2
58
P03406
LEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPGVRYPL
TFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEYFK
84
141
4D8D
84
141
P06241
A
1
1
58
58
204
4D8D
58
204
P03406
B
2
3
149
84
141
4D8D
84
141
P06241
C
1
1
58
58
204
4D8D
58
204
P03406
D
2
3
149
1
ARG
engineered mutation
TRP
96
4D8D
A
P06241
UNP
96
13
2
expression tag
GLY
56
4D8D
B
P03406
UNP
1
2
expression tag
SER
57
4D8D
B
P03406
UNP
2
3
ARG
engineered mutation
TRP
96
4D8D
C
P06241
UNP
96
13
4
expression tag
GLY
56
4D8D
D
P03406
UNP
1
4
expression tag
SER
57
4D8D
D
P03406
UNP
2
5
2
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
130
A
THR
47
A
PRO
134
A
PRO
51
A
TRP
119
A
TRP
36
A
SER
124
A
SER
41
A
LYS
108
A
LYS
25
A
ASN
113
A
ASN
30
A
LEU
86
A
LEU
3
A
ALA
89
A
ALA
6
A
VAL
138
A
VAL
55
A
PRO
140
A
PRO
57
B
TYR
143
B
TYR
88
B
PRO
147
B
PRO
92
B
LEU
181
B
LEU
126
B
PHE
185
B
PHE
130
C
THR
130
C
THR
47
C
PRO
134
C
PRO
51
C
TRP
119
C
TRP
36
C
SER
124
C
SER
41
C
LYS
108
C
LYS
25
C
ASN
113
C
ASN
30
C
LEU
86
C
LEU
3
C
ALA
89
C
ALA
6
C
VAL
138
C
VAL
55
C
PRO
140
C
PRO
57
D
TYR
143
D
TYR
88
D
PRO
147
D
PRO
92
D
LEU
181
D
LEU
126
D
PHE
185
D
PHE
130
BINDING SITE FOR RESIDUE GOL C 201
C
GOL
201
Software
6
B
PHE
191
B
PHE
136
6
5_555
C
GLU
121
C
GLU
38
6
1_555
C
HOH
303
H
HOH
6
1_555
D
TYR
81
D
TYR
26
6
11_655
D
LYS
82
D
LYS
27
6
11_655
D
ASP
86
D
ASP
31
6
11_655
179
P 65 2 2