data_4D9X # _entry.id 4D9X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4D9X pdb_00004d9x 10.2210/pdb4d9x/pdb NDB NA1540 ? ? RCSB RCSB070066 ? ? WWPDB D_1000070066 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3NP6 'The same sequence complexed with Berberine' unspecified PDB 3NX5 'The same sequence complexed with Sanguinarine' unspecified PDB 4D9Y 'The same sequence complexed with Chelerythrine' unspecified # _pdbx_database_status.entry_id 4D9X _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-01-12 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ferraroni, M.' 1 'Bazzicalupi, C.' 2 'Gratteri, P.' 3 'Bilia, A.R.' 4 # _citation.id primary _citation.title 'The crystal structure of Coptisine bound to DNA d(CGTACG)' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ferraroni, M.' 1 ? primary 'Bazzicalupi, C.' 2 ? primary 'Gratteri, P.' 3 ? primary 'Bilia, A.R.' 4 ? # _cell.length_a 30.282 _cell.length_b 30.282 _cell.length_c 118.330 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4D9X _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 4D9X _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*TP*AP*CP*G)-3') ; 1809.217 4 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn '6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium' 320.319 1 ? ? ? ? 4 water nat water 18.015 15 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTACG _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DC n 1 6 DG n # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4D9X _struct_ref.pdbx_db_accession 4D9X _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code CGTACG _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4D9X A 1 ? 6 ? 4D9X 1 ? 6 ? 1 6 2 1 4D9X B 1 ? 6 ? 4D9X 7 ? 12 ? 7 12 3 1 4D9X C 1 ? 6 ? 4D9X 1 ? 6 ? 1 6 4 1 4D9X D 1 ? 6 ? 4D9X 7 ? 12 ? 7 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 KPT non-polymer . '6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium' Coptisine 'C19 H14 N O4 1' 320.319 # _exptl.crystals_number 1 _exptl.entry_id 4D9X _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 296 _exptl_crystal_grow.pdbx_details 'MPD, MgCl2, KCl, spermine, pH 6.0, VAPOR DIFFUSION, temperature 296K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type OXFORD _diffrn_detector.pdbx_collection_date 2010-08-09 _diffrn_detector.details 'OXFORD ONYX CCD' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.542 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type 'OXFORD DIFFRACTION ENHANCE ULTRA' _diffrn_source.pdbx_wavelength_list 1.542 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4D9X _reflns.d_resolution_high 2.440 _reflns.number_obs 2642 _reflns.pdbx_Rmerge_I_obs 0.108 _reflns.pdbx_netI_over_sigmaI 17.480 _reflns.percent_possible_obs 99.500 _reflns.B_iso_Wilson_estimate 43.967 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.number_all ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_Rsym_value ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.440 2.590 5437 ? 404 0.611 4.010 ? ? ? ? ? 97.300 1 1 2.590 2.770 5829 ? 398 0.352 7.200 ? ? ? ? ? 100.000 2 1 2.770 2.990 5067 ? 351 0.256 9.780 ? ? ? ? ? 100.000 3 1 2.990 3.270 4732 ? 328 0.123 18.290 ? ? ? ? ? 100.000 4 1 3.270 3.640 4258 ? 306 0.092 25.430 ? ? ? ? ? 100.000 5 1 3.640 4.190 3748 ? 281 0.085 28.210 ? ? ? ? ? 100.000 6 1 4.190 5.110 3277 ? 245 0.077 28.350 ? ? ? ? ? 100.000 7 1 5.110 7.090 2459 ? 193 0.072 29.500 ? ? ? ? ? 100.000 8 1 7.090 30.0 1462 ? 136 0.067 28.820 ? ? ? ? ? 99.300 9 1 # _refine.entry_id 4D9X _refine.ls_d_res_high 2.4400 _refine.ls_d_res_low 30.0 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5100 _refine.ls_number_reflns_obs 2641 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'Used twin refinement twin fraction 0.204' _refine.ls_R_factor_obs 0.2659 _refine.ls_R_factor_R_work 0.2614 _refine.ls_wR_factor_R_work 0.2595 _refine.ls_R_factor_R_free 0.3074 _refine.ls_wR_factor_R_free 0.3123 _refine.ls_percent_reflns_R_free 9.6000 _refine.ls_number_reflns_R_free 254 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.6741 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc 0.8990 _refine.correlation_coeff_Fo_to_Fc_free 0.8820 _refine.overall_SU_R_Cruickshank_DPI 0.1476 _refine.overall_SU_R_free 0.0734 _refine.pdbx_overall_ESU_R 0.1480 _refine.pdbx_overall_ESU_R_Free 0.0730 _refine.overall_SU_ML 0.1190 _refine.overall_SU_B ? _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3NP6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7534 _refine.B_iso_max 45.380 _refine.B_iso_min 2.000 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_R_factor_all ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 450 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 490 _refine_hist.d_res_high 2.4400 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 531 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 814 1.955 3.000 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 258 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? # _refine_ls_shell.d_res_high 2.440 _refine_ls_shell.d_res_low 2.5060 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.0600 _refine_ls_shell.number_reflns_R_work 175 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.4880 _refine_ls_shell.R_factor_R_free 0.7340 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 190 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4D9X _struct.title 'The crystal structure of Coptisine bound to DNA d(CGTACG)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4D9X _struct_keywords.text 'DRUG-DNA COMPLEX, DOUBLE HELIX, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B DG 6 OP1 ? ? ? 1_555 E CA . CA ? ? B DG 12 B CA 101 1_555 ? ? ? ? ? ? ? 2.198 ? ? metalc2 metalc ? ? E CA . CA ? ? ? 1_555 D DG 6 OP1 ? ? B CA 101 D DG 12 1_555 ? ? ? ? ? ? ? 3.059 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DG 2 N3 ? ? B DG 12 C DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog12 hydrog ? ? B DG 6 N3 ? ? ? 1_555 C DG 2 N2 ? ? B DG 12 C DG 2 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog13 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CA 101 ? 3 'BINDING SITE FOR RESIDUE CA B 101' AC2 Software C KPT 101 ? 9 'BINDING SITE FOR RESIDUE KPT C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DG B 6 ? DG B 12 . ? 1_555 ? 2 AC1 3 DG D 6 ? DG D 12 . ? 5_555 ? 3 AC1 3 DG D 6 ? DG D 12 . ? 1_555 ? 4 AC2 9 DC A 5 ? DC A 5 . ? 1_455 ? 5 AC2 9 DG A 6 ? DG A 6 . ? 1_455 ? 6 AC2 9 DC B 1 ? DC B 7 . ? 4_545 ? 7 AC2 9 DG B 2 ? DG B 8 . ? 1_455 ? 8 AC2 9 DC C 5 ? DC C 5 . ? 1_555 ? 9 AC2 9 DG C 6 ? DG C 6 . ? 1_555 ? 10 AC2 9 DC D 1 ? DC D 7 . ? 4_555 ? 11 AC2 9 DG D 2 ? DG D 8 . ? 4_555 ? 12 AC2 9 DG D 2 ? DG D 8 . ? 1_555 ? # _atom_sites.entry_id 4D9X _atom_sites.fract_transf_matrix[1][1] 0.033023 _atom_sites.fract_transf_matrix[1][2] 0.019066 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.038132 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008451 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O3'" . DC A 1 1 ? 12.277 1.754 2.542 1.00 32.44 ? 1 DC A "O3'" 1 ATOM 2 P P . DG A 1 2 ? 10.787 2.317 2.735 1.00 32.83 ? 2 DG A P 1 ATOM 3 O OP1 . DG A 1 2 ? 9.815 1.275 2.302 1.00 32.46 ? 2 DG A OP1 1 ATOM 4 O OP2 . DG A 1 2 ? 10.752 3.673 2.137 1.00 32.44 ? 2 DG A OP2 1 ATOM 5 O "O5'" . DG A 1 2 ? 10.682 2.431 4.326 1.00 31.13 ? 2 DG A "O5'" 1 ATOM 6 C "C5'" . DG A 1 2 ? 10.338 3.645 4.978 1.00 28.38 ? 2 DG A "C5'" 1 ATOM 7 C "C4'" . DG A 1 2 ? 10.832 3.565 6.408 1.00 25.12 ? 2 DG A "C4'" 1 ATOM 8 O "O4'" . DG A 1 2 ? 10.887 2.181 6.830 1.00 22.36 ? 2 DG A "O4'" 1 ATOM 9 C "C3'" . DG A 1 2 ? 12.226 4.127 6.600 1.00 24.64 ? 2 DG A "C3'" 1 ATOM 10 O "O3'" . DG A 1 2 ? 12.192 4.969 7.738 1.00 26.45 ? 2 DG A "O3'" 1 ATOM 11 C "C2'" . DG A 1 2 ? 13.110 2.892 6.786 1.00 23.30 ? 2 DG A "C2'" 1 ATOM 12 C "C1'" . DG A 1 2 ? 12.138 1.907 7.423 1.00 21.30 ? 2 DG A "C1'" 1 ATOM 13 N N9 . DG A 1 2 ? 12.443 0.495 7.206 1.00 16.88 ? 2 DG A N9 1 ATOM 14 C C8 . DG A 1 2 ? 12.423 -0.179 6.014 1.00 16.64 ? 2 DG A C8 1 ATOM 15 N N7 . DG A 1 2 ? 12.730 -1.443 6.123 1.00 16.40 ? 2 DG A N7 1 ATOM 16 C C5 . DG A 1 2 ? 12.954 -1.627 7.479 1.00 14.74 ? 2 DG A C5 1 ATOM 17 C C6 . DG A 1 2 ? 13.319 -2.796 8.199 1.00 13.17 ? 2 DG A C6 1 ATOM 18 O O6 . DG A 1 2 ? 13.517 -3.942 7.755 1.00 10.96 ? 2 DG A O6 1 ATOM 19 N N1 . DG A 1 2 ? 13.443 -2.548 9.572 1.00 9.99 ? 2 DG A N1 1 ATOM 20 C C2 . DG A 1 2 ? 13.254 -1.333 10.168 1.00 11.14 ? 2 DG A C2 1 ATOM 21 N N2 . DG A 1 2 ? 13.431 -1.300 11.495 1.00 10.87 ? 2 DG A N2 1 ATOM 22 N N3 . DG A 1 2 ? 12.910 -0.224 9.511 1.00 14.70 ? 2 DG A N3 1 ATOM 23 C C4 . DG A 1 2 ? 12.776 -0.441 8.165 1.00 16.20 ? 2 DG A C4 1 ATOM 24 P P . DT A 1 3 ? 13.108 6.276 7.801 1.00 28.20 ? 3 DT A P 1 ATOM 25 O OP1 . DT A 1 3 ? 12.276 7.421 8.240 1.00 28.56 ? 3 DT A OP1 1 ATOM 26 O OP2 . DT A 1 3 ? 13.830 6.364 6.508 1.00 26.93 ? 3 DT A OP2 1 ATOM 27 O "O5'" . DT A 1 3 ? 14.151 5.923 8.981 1.00 29.31 ? 3 DT A "O5'" 1 ATOM 28 C "C5'" . DT A 1 3 ? 13.767 5.101 10.098 1.00 29.44 ? 3 DT A "C5'" 1 ATOM 29 C "C4'" . DT A 1 3 ? 14.917 4.363 10.796 1.00 29.52 ? 3 DT A "C4'" 1 ATOM 30 O "O4'" . DT A 1 3 ? 14.958 2.965 10.397 1.00 29.33 ? 3 DT A "O4'" 1 ATOM 31 C "C3'" . DT A 1 3 ? 16.349 4.871 10.625 1.00 30.46 ? 3 DT A "C3'" 1 ATOM 32 O "O3'" . DT A 1 3 ? 16.980 4.766 11.892 1.00 31.74 ? 3 DT A "O3'" 1 ATOM 33 C "C2'" . DT A 1 3 ? 16.972 3.861 9.664 1.00 29.52 ? 3 DT A "C2'" 1 ATOM 34 C "C1'" . DT A 1 3 ? 16.299 2.586 10.162 1.00 28.85 ? 3 DT A "C1'" 1 ATOM 35 N N1 . DT A 1 3 ? 16.349 1.395 9.243 1.00 28.40 ? 3 DT A N1 1 ATOM 36 C C2 . DT A 1 3 ? 16.564 0.130 9.776 1.00 29.13 ? 3 DT A C2 1 ATOM 37 O O2 . DT A 1 3 ? 16.722 -0.095 10.964 1.00 28.88 ? 3 DT A O2 1 ATOM 38 N N3 . DT A 1 3 ? 16.591 -0.895 8.858 1.00 28.67 ? 3 DT A N3 1 ATOM 39 C C4 . DT A 1 3 ? 16.436 -0.796 7.483 1.00 28.47 ? 3 DT A C4 1 ATOM 40 O O4 . DT A 1 3 ? 16.481 -1.796 6.760 1.00 28.89 ? 3 DT A O4 1 ATOM 41 C C5 . DT A 1 3 ? 16.214 0.549 6.987 1.00 28.32 ? 3 DT A C5 1 ATOM 42 C C7 . DT A 1 3 ? 16.022 0.812 5.519 1.00 27.88 ? 3 DT A C7 1 ATOM 43 C C6 . DT A 1 3 ? 16.183 1.561 7.876 1.00 28.47 ? 3 DT A C6 1 ATOM 44 P P . DA A 1 4 ? 18.086 5.795 12.416 1.00 31.73 ? 4 DA A P 1 ATOM 45 O OP1 . DA A 1 4 ? 17.375 6.760 13.287 1.00 32.30 ? 4 DA A OP1 1 ATOM 46 O OP2 . DA A 1 4 ? 18.914 6.284 11.291 1.00 30.98 ? 4 DA A OP2 1 ATOM 47 O "O5'" . DA A 1 4 ? 18.990 4.818 13.310 1.00 30.19 ? 4 DA A "O5'" 1 ATOM 48 C "C5'" . DA A 1 4 ? 18.352 3.875 14.193 1.00 28.84 ? 4 DA A "C5'" 1 ATOM 49 C "C4'" . DA A 1 4 ? 19.147 2.589 14.357 1.00 27.29 ? 4 DA A "C4'" 1 ATOM 50 O "O4'" . DA A 1 4 ? 18.936 1.714 13.218 1.00 27.16 ? 4 DA A "O4'" 1 ATOM 51 C "C3'" . DA A 1 4 ? 20.657 2.758 14.472 1.00 27.72 ? 4 DA A "C3'" 1 ATOM 52 O "O3'" . DA A 1 4 ? 21.148 2.136 15.677 1.00 28.76 ? 4 DA A "O3'" 1 ATOM 53 C "C2'" . DA A 1 4 ? 21.224 2.099 13.216 1.00 27.00 ? 4 DA A "C2'" 1 ATOM 54 C "C1'" . DA A 1 4 ? 20.147 1.077 12.884 1.00 25.65 ? 4 DA A "C1'" 1 ATOM 55 N N9 . DA A 1 4 ? 20.068 0.698 11.479 1.00 24.43 ? 4 DA A N9 1 ATOM 56 C C8 . DA A 1 4 ? 19.947 1.535 10.406 1.00 22.87 ? 4 DA A C8 1 ATOM 57 N N7 . DA A 1 4 ? 19.887 0.904 9.258 1.00 22.88 ? 4 DA A N7 1 ATOM 58 C C5 . DA A 1 4 ? 19.964 -0.440 9.595 1.00 22.07 ? 4 DA A C5 1 ATOM 59 C C6 . DA A 1 4 ? 19.953 -1.628 8.836 1.00 21.75 ? 4 DA A C6 1 ATOM 60 N N6 . DA A 1 4 ? 19.850 -1.658 7.515 1.00 22.37 ? 4 DA A N6 1 ATOM 61 N N1 . DA A 1 4 ? 20.056 -2.807 9.483 1.00 23.89 ? 4 DA A N1 1 ATOM 62 C C2 . DA A 1 4 ? 20.158 -2.800 10.819 1.00 23.33 ? 4 DA A C2 1 ATOM 63 N N3 . DA A 1 4 ? 20.169 -1.750 11.639 1.00 22.20 ? 4 DA A N3 1 ATOM 64 C C4 . DA A 1 4 ? 20.074 -0.589 10.963 1.00 23.51 ? 4 DA A C4 1 ATOM 65 P P . DC A 1 5 ? 22.571 2.595 16.259 1.00 29.03 ? 5 DC A P 1 ATOM 66 O OP1 . DC A 1 5 ? 22.488 2.695 17.730 1.00 28.79 ? 5 DC A OP1 1 ATOM 67 O OP2 . DC A 1 5 ? 23.051 3.759 15.470 1.00 28.34 ? 5 DC A OP2 1 ATOM 68 O "O5'" . DC A 1 5 ? 23.499 1.351 15.894 1.00 29.76 ? 5 DC A "O5'" 1 ATOM 69 C "C5'" . DC A 1 5 ? 22.985 0.037 15.745 1.00 30.28 ? 5 DC A "C5'" 1 ATOM 70 C "C4'" . DC A 1 5 ? 23.850 -0.746 14.775 1.00 30.42 ? 5 DC A "C4'" 1 ATOM 71 O "O4'" . DC A 1 5 ? 23.304 -0.661 13.443 1.00 30.02 ? 5 DC A "O4'" 1 ATOM 72 C "C3'" . DC A 1 5 ? 25.287 -0.251 14.629 1.00 31.29 ? 5 DC A "C3'" 1 ATOM 73 O "O3'" . DC A 1 5 ? 26.093 -1.104 15.394 1.00 30.74 ? 5 DC A "O3'" 1 ATOM 74 C "C2'" . DC A 1 5 ? 25.604 -0.362 13.133 1.00 31.67 ? 5 DC A "C2'" 1 ATOM 75 C "C1'" . DC A 1 5 ? 24.343 -1.024 12.571 1.00 30.41 ? 5 DC A "C1'" 1 ATOM 76 N N1 . DC A 1 5 ? 23.954 -0.614 11.191 1.00 30.69 ? 5 DC A N1 1 ATOM 77 C C2 . DC A 1 5 ? 23.802 -1.605 10.209 1.00 30.47 ? 5 DC A C2 1 ATOM 78 O O2 . DC A 1 5 ? 23.993 -2.797 10.502 1.00 30.80 ? 5 DC A O2 1 ATOM 79 N N3 . DC A 1 5 ? 23.446 -1.223 8.953 1.00 30.36 ? 5 DC A N3 1 ATOM 80 C C4 . DC A 1 5 ? 23.243 0.065 8.666 1.00 30.04 ? 5 DC A C4 1 ATOM 81 N N4 . DC A 1 5 ? 22.897 0.370 7.412 1.00 29.36 ? 5 DC A N4 1 ATOM 82 C C5 . DC A 1 5 ? 23.397 1.092 9.649 1.00 29.97 ? 5 DC A C5 1 ATOM 83 C C6 . DC A 1 5 ? 23.749 0.710 10.886 1.00 30.84 ? 5 DC A C6 1 ATOM 84 P P . DG A 1 6 ? 27.423 -0.599 16.099 1.00 32.60 ? 6 DG A P 1 ATOM 85 O OP1 . DG A 1 6 ? 27.489 -1.289 17.412 1.00 32.78 ? 6 DG A OP1 1 ATOM 86 O OP2 . DG A 1 6 ? 27.548 0.888 16.027 1.00 31.77 ? 6 DG A OP2 1 ATOM 87 O "O5'" . DG A 1 6 ? 28.511 -1.258 15.145 1.00 32.06 ? 6 DG A "O5'" 1 ATOM 88 C "C5'" . DG A 1 6 ? 28.772 -2.657 15.258 1.00 32.52 ? 6 DG A "C5'" 1 ATOM 89 C "C4'" . DG A 1 6 ? 29.993 -3.008 14.437 1.00 34.09 ? 6 DG A "C4'" 1 ATOM 90 O "O4'" . DG A 1 6 ? 29.706 -2.717 13.044 1.00 34.39 ? 6 DG A "O4'" 1 ATOM 91 C "C3'" . DG A 1 6 ? 31.243 -2.203 14.789 1.00 33.86 ? 6 DG A "C3'" 1 ATOM 92 O "O3'" . DG A 1 6 ? 31.996 -2.846 15.798 1.00 34.12 ? 6 DG A "O3'" 1 ATOM 93 C "C2'" . DG A 1 6 ? 31.982 -2.163 13.458 1.00 34.83 ? 6 DG A "C2'" 1 ATOM 94 C "C1'" . DG A 1 6 ? 30.813 -2.036 12.482 1.00 35.62 ? 6 DG A "C1'" 1 ATOM 95 N N9 . DG A 1 6 ? 30.410 -0.665 12.172 1.00 36.79 ? 6 DG A N9 1 ATOM 96 C C8 . DG A 1 6 ? 30.338 0.424 13.010 1.00 37.76 ? 6 DG A C8 1 ATOM 97 N N7 . DG A 1 6 ? 29.939 1.518 12.421 1.00 38.08 ? 6 DG A N7 1 ATOM 98 C C5 . DG A 1 6 ? 29.730 1.129 11.104 1.00 37.93 ? 6 DG A C5 1 ATOM 99 C C6 . DG A 1 6 ? 29.292 1.881 9.983 1.00 38.17 ? 6 DG A C6 1 ATOM 100 O O6 . DG A 1 6 ? 28.998 3.087 9.957 1.00 36.69 ? 6 DG A O6 1 ATOM 101 N N1 . DG A 1 6 ? 29.216 1.089 8.820 1.00 37.77 ? 6 DG A N1 1 ATOM 102 C C2 . DG A 1 6 ? 29.524 -0.257 8.770 1.00 37.50 ? 6 DG A C2 1 ATOM 103 N N2 . DG A 1 6 ? 29.407 -0.887 7.595 1.00 37.40 ? 6 DG A N2 1 ATOM 104 N N3 . DG A 1 6 ? 29.935 -0.962 9.815 1.00 38.12 ? 6 DG A N3 1 ATOM 105 C C4 . DG A 1 6 ? 30.014 -0.211 10.941 1.00 37.60 ? 6 DG A C4 1 ATOM 106 O "O5'" . DC B 1 1 ? 19.252 -11.464 -0.891 1.00 31.01 ? 7 DC B "O5'" 1 ATOM 107 C "C5'" . DC B 1 1 ? 19.722 -11.129 -2.190 1.00 32.66 ? 7 DC B "C5'" 1 ATOM 108 C "C4'" . DC B 1 1 ? 21.112 -10.501 -2.146 1.00 31.75 ? 7 DC B "C4'" 1 ATOM 109 O "O4'" . DC B 1 1 ? 21.812 -10.804 -3.382 1.00 31.77 ? 7 DC B "O4'" 1 ATOM 110 C "C3'" . DC B 1 1 ? 21.137 -8.979 -2.035 1.00 30.66 ? 7 DC B "C3'" 1 ATOM 111 O "O3'" . DC B 1 1 ? 22.328 -8.538 -1.351 1.00 30.06 ? 7 DC B "O3'" 1 ATOM 112 C "C2'" . DC B 1 1 ? 21.113 -8.541 -3.499 1.00 30.65 ? 7 DC B "C2'" 1 ATOM 113 C "C1'" . DC B 1 1 ? 21.975 -9.619 -4.164 1.00 31.05 ? 7 DC B "C1'" 1 ATOM 114 N N1 . DC B 1 1 ? 21.660 -9.958 -5.599 1.00 30.60 ? 7 DC B N1 1 ATOM 115 C C2 . DC B 1 1 ? 22.590 -9.717 -6.631 1.00 30.78 ? 7 DC B C2 1 ATOM 116 O O2 . DC B 1 1 ? 23.686 -9.192 -6.384 1.00 29.95 ? 7 DC B O2 1 ATOM 117 N N3 . DC B 1 1 ? 22.255 -10.060 -7.907 1.00 30.49 ? 7 DC B N3 1 ATOM 118 C C4 . DC B 1 1 ? 21.075 -10.634 -8.178 1.00 31.53 ? 7 DC B C4 1 ATOM 119 N N4 . DC B 1 1 ? 20.797 -10.953 -9.450 1.00 31.37 ? 7 DC B N4 1 ATOM 120 C C5 . DC B 1 1 ? 20.119 -10.896 -7.149 1.00 31.32 ? 7 DC B C5 1 ATOM 121 C C6 . DC B 1 1 ? 20.457 -10.548 -5.899 1.00 31.86 ? 7 DC B C6 1 ATOM 122 P P . DG B 1 2 ? 22.252 -7.488 -0.133 1.00 29.44 ? 8 DG B P 1 ATOM 123 O OP1 . DG B 1 2 ? 20.981 -6.729 -0.215 1.00 28.77 ? 8 DG B OP1 1 ATOM 124 O OP2 . DG B 1 2 ? 23.512 -6.720 -0.037 1.00 29.11 ? 8 DG B OP2 1 ATOM 125 O "O5'" . DG B 1 2 ? 22.158 -8.494 1.109 1.00 28.26 ? 8 DG B "O5'" 1 ATOM 126 C "C5'" . DG B 1 2 ? 23.148 -9.474 1.415 1.00 24.73 ? 8 DG B "C5'" 1 ATOM 127 C "C4'" . DG B 1 2 ? 23.509 -9.361 2.885 1.00 24.00 ? 8 DG B "C4'" 1 ATOM 128 O "O4'" . DG B 1 2 ? 24.043 -8.037 3.084 1.00 23.05 ? 8 DG B "O4'" 1 ATOM 129 C "C3'" . DG B 1 2 ? 22.350 -9.409 3.877 1.00 23.71 ? 8 DG B "C3'" 1 ATOM 130 O "O3'" . DG B 1 2 ? 22.024 -10.750 4.214 1.00 23.55 ? 8 DG B "O3'" 1 ATOM 131 C "C2'" . DG B 1 2 ? 22.918 -8.656 5.074 1.00 23.13 ? 8 DG B "C2'" 1 ATOM 132 C "C1'" . DG B 1 2 ? 23.907 -7.678 4.439 1.00 23.16 ? 8 DG B "C1'" 1 ATOM 133 N N9 . DG B 1 2 ? 23.486 -6.276 4.506 1.00 22.24 ? 8 DG B N9 1 ATOM 134 C C8 . DG B 1 2 ? 23.184 -5.437 3.466 1.00 20.78 ? 8 DG B C8 1 ATOM 135 N N7 . DG B 1 2 ? 22.832 -4.240 3.852 1.00 21.67 ? 8 DG B N7 1 ATOM 136 C C5 . DG B 1 2 ? 22.922 -4.281 5.241 1.00 21.48 ? 8 DG B C5 1 ATOM 137 C C6 . DG B 1 2 ? 22.673 -3.289 6.225 1.00 20.37 ? 8 DG B C6 1 ATOM 138 O O6 . DG B 1 2 ? 22.320 -2.116 6.077 1.00 19.94 ? 8 DG B O6 1 ATOM 139 N N1 . DG B 1 2 ? 22.890 -3.763 7.516 1.00 21.15 ? 8 DG B N1 1 ATOM 140 C C2 . DG B 1 2 ? 23.289 -5.041 7.825 1.00 20.52 ? 8 DG B C2 1 ATOM 141 N N2 . DG B 1 2 ? 23.434 -5.332 9.122 1.00 19.05 ? 8 DG B N2 1 ATOM 142 N N3 . DG B 1 2 ? 23.530 -5.972 6.914 1.00 20.94 ? 8 DG B N3 1 ATOM 143 C C4 . DG B 1 2 ? 23.325 -5.531 5.653 1.00 21.13 ? 8 DG B C4 1 ATOM 144 P P . DT B 1 3 ? 20.557 -11.135 4.757 1.00 24.74 ? 9 DT B P 1 ATOM 145 O OP1 . DT B 1 3 ? 20.342 -12.549 4.403 1.00 21.47 ? 9 DT B OP1 1 ATOM 146 O OP2 . DT B 1 3 ? 19.592 -10.094 4.323 1.00 22.25 ? 9 DT B OP2 1 ATOM 147 O "O5'" . DT B 1 3 ? 20.694 -10.981 6.346 1.00 23.09 ? 9 DT B "O5'" 1 ATOM 148 C "C5'" . DT B 1 3 ? 21.721 -11.580 7.087 1.00 23.96 ? 9 DT B "C5'" 1 ATOM 149 C "C4'" . DT B 1 3 ? 21.583 -11.129 8.533 1.00 23.92 ? 9 DT B "C4'" 1 ATOM 150 O "O4'" . DT B 1 3 ? 21.712 -9.686 8.659 1.00 23.62 ? 9 DT B "O4'" 1 ATOM 151 C "C3'" . DT B 1 3 ? 20.255 -11.455 9.196 1.00 23.39 ? 9 DT B "C3'" 1 ATOM 152 O "O3'" . DT B 1 3 ? 20.591 -11.757 10.531 1.00 22.69 ? 9 DT B "O3'" 1 ATOM 153 C "C2'" . DT B 1 3 ? 19.438 -10.168 9.041 1.00 22.95 ? 9 DT B "C2'" 1 ATOM 154 C "C1'" . DT B 1 3 ? 20.532 -9.118 9.195 1.00 23.05 ? 9 DT B "C1'" 1 ATOM 155 N N1 . DT B 1 3 ? 20.320 -7.806 8.487 1.00 22.69 ? 9 DT B N1 1 ATOM 156 C C2 . DT B 1 3 ? 20.376 -6.660 9.253 1.00 21.76 ? 9 DT B C2 1 ATOM 157 O O2 . DT B 1 3 ? 20.560 -6.662 10.452 1.00 20.57 ? 9 DT B O2 1 ATOM 158 N N3 . DT B 1 3 ? 20.205 -5.492 8.556 1.00 21.13 ? 9 DT B N3 1 ATOM 159 C C4 . DT B 1 3 ? 19.978 -5.352 7.207 1.00 20.13 ? 9 DT B C4 1 ATOM 160 O O4 . DT B 1 3 ? 19.831 -4.244 6.705 1.00 20.83 ? 9 DT B O4 1 ATOM 161 C C5 . DT B 1 3 ? 19.932 -6.586 6.449 1.00 21.00 ? 9 DT B C5 1 ATOM 162 C C7 . DT B 1 3 ? 19.692 -6.539 4.964 1.00 18.79 ? 9 DT B C7 1 ATOM 163 C C6 . DT B 1 3 ? 20.104 -7.744 7.114 1.00 20.53 ? 9 DT B C6 1 ATOM 164 P P . DA B 1 4 ? 19.515 -12.084 11.668 1.00 21.67 ? 10 DA B P 1 ATOM 165 O OP1 . DA B 1 4 ? 20.198 -13.060 12.569 1.00 22.61 ? 10 DA B OP1 1 ATOM 166 O OP2 . DA B 1 4 ? 18.195 -12.421 11.086 1.00 19.80 ? 10 DA B OP2 1 ATOM 167 O "O5'" . DA B 1 4 ? 19.398 -10.649 12.342 1.00 20.06 ? 10 DA B "O5'" 1 ATOM 168 C "C5'" . DA B 1 4 ? 20.401 -10.175 13.223 1.00 19.75 ? 10 DA B "C5'" 1 ATOM 169 C "C4'" . DA B 1 4 ? 19.832 -9.132 14.173 1.00 18.83 ? 10 DA B "C4'" 1 ATOM 170 O "O4'" . DA B 1 4 ? 19.557 -7.896 13.467 1.00 18.86 ? 10 DA B "O4'" 1 ATOM 171 C "C3'" . DA B 1 4 ? 18.521 -9.532 14.834 1.00 17.78 ? 10 DA B "C3'" 1 ATOM 172 O "O3'" . DA B 1 4 ? 18.502 -9.066 16.177 1.00 18.43 ? 10 DA B "O3'" 1 ATOM 173 C "C2'" . DA B 1 4 ? 17.452 -8.850 13.984 1.00 16.89 ? 10 DA B "C2'" 1 ATOM 174 C "C1'" . DA B 1 4 ? 18.167 -7.578 13.541 1.00 19.25 ? 10 DA B "C1'" 1 ATOM 175 N N9 . DA B 1 4 ? 17.797 -7.141 12.198 1.00 17.60 ? 10 DA B N9 1 ATOM 176 C C8 . DA B 1 4 ? 17.670 -7.947 11.106 1.00 18.14 ? 10 DA B C8 1 ATOM 177 N N7 . DA B 1 4 ? 17.357 -7.299 10.007 1.00 18.59 ? 10 DA B N7 1 ATOM 178 C C5 . DA B 1 4 ? 17.265 -5.989 10.417 1.00 17.35 ? 10 DA B C5 1 ATOM 179 C C6 . DA B 1 4 ? 16.954 -4.813 9.718 1.00 17.95 ? 10 DA B C6 1 ATOM 180 N N6 . DA B 1 4 ? 16.668 -4.811 8.409 1.00 18.73 ? 10 DA B N6 1 ATOM 181 N N1 . DA B 1 4 ? 16.947 -3.653 10.416 1.00 17.36 ? 10 DA B N1 1 ATOM 182 C C2 . DA B 1 4 ? 17.214 -3.686 11.729 1.00 16.91 ? 10 DA B C2 1 ATOM 183 N N3 . DA B 1 4 ? 17.521 -4.733 12.492 1.00 16.85 ? 10 DA B N3 1 ATOM 184 C C4 . DA B 1 4 ? 17.533 -5.867 11.769 1.00 17.17 ? 10 DA B C4 1 ATOM 185 P P . DC B 1 5 ? 17.191 -9.345 17.054 1.00 16.85 ? 11 DC B P 1 ATOM 186 O OP1 . DC B 1 5 ? 17.617 -9.373 18.470 1.00 18.35 ? 11 DC B OP1 1 ATOM 187 O OP2 . DC B 1 5 ? 16.478 -10.492 16.442 1.00 13.44 ? 11 DC B OP2 1 ATOM 188 O "O5'" . DC B 1 5 ? 16.238 -8.080 16.778 1.00 16.27 ? 11 DC B "O5'" 1 ATOM 189 C "C5'" . DC B 1 5 ? 16.563 -6.759 17.058 1.00 15.05 ? 11 DC B "C5'" 1 ATOM 190 C "C4'" . DC B 1 5 ? 15.411 -5.826 16.686 1.00 16.54 ? 11 DC B "C4'" 1 ATOM 191 O "O4'" . DC B 1 5 ? 15.370 -5.561 15.253 1.00 17.13 ? 11 DC B "O4'" 1 ATOM 192 C "C3'" . DC B 1 5 ? 13.996 -6.272 17.051 1.00 17.26 ? 11 DC B "C3'" 1 ATOM 193 O "O3'" . DC B 1 5 ? 13.308 -5.123 17.569 1.00 18.20 ? 11 DC B "O3'" 1 ATOM 194 C "C2'" . DC B 1 5 ? 13.426 -6.710 15.711 1.00 15.30 ? 11 DC B "C2'" 1 ATOM 195 C "C1'" . DC B 1 5 ? 14.031 -5.632 14.823 1.00 15.12 ? 11 DC B "C1'" 1 ATOM 196 N N1 . DC B 1 5 ? 13.955 -5.885 13.346 1.00 13.08 ? 11 DC B N1 1 ATOM 197 C C2 . DC B 1 5 ? 13.728 -4.837 12.433 1.00 11.79 ? 11 DC B C2 1 ATOM 198 O O2 . DC B 1 5 ? 13.596 -3.668 12.835 1.00 9.60 ? 11 DC B O2 1 ATOM 199 N N3 . DC B 1 5 ? 13.678 -5.140 11.105 1.00 11.77 ? 11 DC B N3 1 ATOM 200 C C4 . DC B 1 5 ? 13.814 -6.411 10.686 1.00 12.63 ? 11 DC B C4 1 ATOM 201 N N4 . DC B 1 5 ? 13.752 -6.686 9.371 1.00 11.93 ? 11 DC B N4 1 ATOM 202 C C5 . DC B 1 5 ? 14.045 -7.480 11.603 1.00 13.39 ? 11 DC B C5 1 ATOM 203 C C6 . DC B 1 5 ? 14.111 -7.172 12.902 1.00 14.36 ? 11 DC B C6 1 ATOM 204 P P . DG B 1 6 ? 11.966 -5.252 18.420 1.00 18.15 ? 12 DG B P 1 ATOM 205 O OP1 . DG B 1 6 ? 11.810 -3.984 19.170 1.00 17.07 ? 12 DG B OP1 1 ATOM 206 O OP2 . DG B 1 6 ? 11.960 -6.548 19.134 1.00 19.02 ? 12 DG B OP2 1 ATOM 207 O "O5'" . DG B 1 6 ? 10.854 -5.328 17.266 1.00 18.80 ? 12 DG B "O5'" 1 ATOM 208 C "C5'" . DG B 1 6 ? 10.127 -4.163 16.893 1.00 19.96 ? 12 DG B "C5'" 1 ATOM 209 C "C4'" . DG B 1 6 ? 8.810 -4.532 16.239 1.00 21.75 ? 12 DG B "C4'" 1 ATOM 210 O "O4'" . DG B 1 6 ? 8.960 -5.754 15.462 1.00 22.89 ? 12 DG B "O4'" 1 ATOM 211 C "C3'" . DG B 1 6 ? 7.691 -4.801 17.240 1.00 23.04 ? 12 DG B "C3'" 1 ATOM 212 O "O3'" . DG B 1 6 ? 6.927 -3.608 17.467 1.00 23.61 ? 12 DG B "O3'" 1 ATOM 213 C "C2'" . DG B 1 6 ? 6.899 -5.927 16.568 1.00 22.14 ? 12 DG B "C2'" 1 ATOM 214 C "C1'" . DG B 1 6 ? 8.011 -6.725 15.886 1.00 23.16 ? 12 DG B "C1'" 1 ATOM 215 N N9 . DG B 1 6 ? 8.761 -7.666 16.718 1.00 24.42 ? 12 DG B N9 1 ATOM 216 C C8 . DG B 1 6 ? 8.614 -7.903 18.068 1.00 24.76 ? 12 DG B C8 1 ATOM 217 N N7 . DG B 1 6 ? 9.450 -8.783 18.537 1.00 25.05 ? 12 DG B N7 1 ATOM 218 C C5 . DG B 1 6 ? 10.205 -9.154 17.437 1.00 25.21 ? 12 DG B C5 1 ATOM 219 C C6 . DG B 1 6 ? 11.271 -10.080 17.343 1.00 25.47 ? 12 DG B C6 1 ATOM 220 O O6 . DG B 1 6 ? 11.754 -10.776 18.250 1.00 24.68 ? 12 DG B O6 1 ATOM 221 N N1 . DG B 1 6 ? 11.776 -10.161 16.044 1.00 25.26 ? 12 DG B N1 1 ATOM 222 C C2 . DG B 1 6 ? 11.302 -9.437 14.968 1.00 25.97 ? 12 DG B C2 1 ATOM 223 N N2 . DG B 1 6 ? 11.905 -9.643 13.782 1.00 25.82 ? 12 DG B N2 1 ATOM 224 N N3 . DG B 1 6 ? 10.302 -8.568 15.052 1.00 25.70 ? 12 DG B N3 1 ATOM 225 C C4 . DG B 1 6 ? 9.802 -8.473 16.310 1.00 24.86 ? 12 DG B C4 1 ATOM 226 O "O3'" . DC C 1 1 ? 11.375 -13.046 5.353 1.00 39.12 ? 1 DC C "O3'" 1 ATOM 227 P P . DG C 1 2 ? 12.912 -12.733 5.676 1.00 40.56 ? 2 DG C P 1 ATOM 228 O OP1 . DG C 1 2 ? 13.344 -11.606 4.813 1.00 40.32 ? 2 DG C OP1 1 ATOM 229 O OP2 . DG C 1 2 ? 13.640 -14.026 5.601 1.00 40.58 ? 2 DG C OP2 1 ATOM 230 O "O5'" . DG C 1 2 ? 12.885 -12.247 7.205 1.00 38.75 ? 2 DG C "O5'" 1 ATOM 231 C "C5'" . DG C 1 2 ? 13.662 -12.922 8.223 1.00 36.13 ? 2 DG C "C5'" 1 ATOM 232 C "C4'" . DG C 1 2 ? 12.998 -12.852 9.593 1.00 33.38 ? 2 DG C "C4'" 1 ATOM 233 O "O4'" . DG C 1 2 ? 12.765 -11.470 9.953 1.00 32.49 ? 2 DG C "O4'" 1 ATOM 234 C "C3'" . DG C 1 2 ? 11.640 -13.530 9.730 1.00 32.75 ? 2 DG C "C3'" 1 ATOM 235 O "O3'" . DG C 1 2 ? 11.505 -14.053 11.047 1.00 32.57 ? 2 DG C "O3'" 1 ATOM 236 C "C2'" . DG C 1 2 ? 10.644 -12.396 9.477 1.00 32.14 ? 2 DG C "C2'" 1 ATOM 237 C "C1'" . DG C 1 2 ? 11.379 -11.186 10.049 1.00 31.32 ? 2 DG C "C1'" 1 ATOM 238 N N9 . DG C 1 2 ? 11.138 -9.931 9.333 1.00 29.27 ? 2 DG C N9 1 ATOM 239 C C8 . DG C 1 2 ? 11.160 -9.743 7.974 1.00 28.21 ? 2 DG C C8 1 ATOM 240 N N7 . DG C 1 2 ? 10.913 -8.518 7.603 1.00 27.49 ? 2 DG C N7 1 ATOM 241 C C5 . DG C 1 2 ? 10.717 -7.840 8.796 1.00 26.58 ? 2 DG C C5 1 ATOM 242 C C6 . DG C 1 2 ? 10.416 -6.478 9.022 1.00 25.60 ? 2 DG C C6 1 ATOM 243 O O6 . DG C 1 2 ? 10.265 -5.576 8.187 1.00 25.73 ? 2 DG C O6 1 ATOM 244 N N1 . DG C 1 2 ? 10.291 -6.186 10.377 1.00 25.43 ? 2 DG C N1 1 ATOM 245 C C2 . DG C 1 2 ? 10.441 -7.093 11.392 1.00 25.52 ? 2 DG C C2 1 ATOM 246 N N2 . DG C 1 2 ? 10.276 -6.603 12.628 1.00 24.18 ? 2 DG C N2 1 ATOM 247 N N3 . DG C 1 2 ? 10.726 -8.383 11.198 1.00 27.09 ? 2 DG C N3 1 ATOM 248 C C4 . DG C 1 2 ? 10.854 -8.690 9.875 1.00 28.10 ? 2 DG C C4 1 ATOM 249 P P . DT C 1 3 ? 10.417 -15.173 11.428 1.00 33.01 ? 3 DT C P 1 ATOM 250 O OP1 . DT C 1 3 ? 11.141 -16.209 12.203 1.00 33.30 ? 3 DT C OP1 1 ATOM 251 O OP2 . DT C 1 3 ? 9.659 -15.574 10.222 1.00 33.11 ? 3 DT C OP2 1 ATOM 252 O "O5'" . DT C 1 3 ? 9.397 -14.405 12.392 1.00 32.53 ? 3 DT C "O5'" 1 ATOM 253 C "C5'" . DT C 1 3 ? 9.915 -13.665 13.499 1.00 32.45 ? 3 DT C "C5'" 1 ATOM 254 C "C4'" . DT C 1 3 ? 9.017 -12.508 13.908 1.00 31.16 ? 3 DT C "C4'" 1 ATOM 255 O "O4'" . DT C 1 3 ? 9.078 -11.430 12.936 1.00 30.81 ? 3 DT C "O4'" 1 ATOM 256 C "C3'" . DT C 1 3 ? 7.534 -12.832 14.089 1.00 30.75 ? 3 DT C "C3'" 1 ATOM 257 O "O3'" . DT C 1 3 ? 7.119 -12.307 15.347 1.00 30.83 ? 3 DT C "O3'" 1 ATOM 258 C "C2'" . DT C 1 3 ? 6.873 -12.075 12.932 1.00 31.18 ? 3 DT C "C2'" 1 ATOM 259 C "C1'" . DT C 1 3 ? 7.785 -10.855 12.899 1.00 30.43 ? 3 DT C "C1'" 1 ATOM 260 N N1 . DT C 1 3 ? 7.620 -9.888 11.756 1.00 29.53 ? 3 DT C N1 1 ATOM 261 C C2 . DT C 1 3 ? 7.405 -8.551 12.043 1.00 30.44 ? 3 DT C C2 1 ATOM 262 O O2 . DT C 1 3 ? 7.330 -8.107 13.176 1.00 31.79 ? 3 DT C O2 1 ATOM 263 N N3 . DT C 1 3 ? 7.271 -7.725 10.950 1.00 30.04 ? 3 DT C N3 1 ATOM 264 C C4 . DT C 1 3 ? 7.332 -8.093 9.615 1.00 29.75 ? 3 DT C C4 1 ATOM 265 O O4 . DT C 1 3 ? 7.193 -7.266 8.719 1.00 27.45 ? 3 DT C O4 1 ATOM 266 C C5 . DT C 1 3 ? 7.564 -9.507 9.375 1.00 29.83 ? 3 DT C C5 1 ATOM 267 C C7 . DT C 1 3 ? 7.649 -10.046 7.977 1.00 30.49 ? 3 DT C C7 1 ATOM 268 C C6 . DT C 1 3 ? 7.698 -10.321 10.441 1.00 30.20 ? 3 DT C C6 1 ATOM 269 P P . DA C 1 4 ? 5.918 -12.919 16.222 1.00 30.72 ? 4 DA C P 1 ATOM 270 O OP1 . DA C 1 4 ? 6.498 -13.411 17.490 1.00 30.99 ? 4 DA C OP1 1 ATOM 271 O OP2 . DA C 1 4 ? 5.104 -13.837 15.394 1.00 30.03 ? 4 DA C OP2 1 ATOM 272 O "O5'" . DA C 1 4 ? 5.066 -11.604 16.532 1.00 29.61 ? 4 DA C "O5'" 1 ATOM 273 C "C5'" . DA C 1 4 ? 5.655 -10.488 17.191 1.00 28.10 ? 4 DA C "C5'" 1 ATOM 274 C "C4'" . DA C 1 4 ? 4.809 -9.250 16.966 1.00 26.38 ? 4 DA C "C4'" 1 ATOM 275 O "O4'" . DA C 1 4 ? 5.035 -8.753 15.625 1.00 26.71 ? 4 DA C "O4'" 1 ATOM 276 C "C3'" . DA C 1 4 ? 3.302 -9.490 17.084 1.00 26.77 ? 4 DA C "C3'" 1 ATOM 277 O "O3'" . DA C 1 4 ? 2.724 -8.579 18.035 1.00 25.78 ? 4 DA C "O3'" 1 ATOM 278 C "C2'" . DA C 1 4 ? 2.773 -9.290 15.658 1.00 25.89 ? 4 DA C "C2'" 1 ATOM 279 C "C1'" . DA C 1 4 ? 3.803 -8.337 15.068 1.00 25.23 ? 4 DA C "C1'" 1 ATOM 280 N N9 . DA C 1 4 ? 3.860 -8.302 13.599 1.00 23.49 ? 4 DA C N9 1 ATOM 281 C C8 . DA C 1 4 ? 4.000 -9.348 12.727 1.00 22.98 ? 4 DA C C8 1 ATOM 282 N N7 . DA C 1 4 ? 3.995 -8.983 11.457 1.00 23.53 ? 4 DA C N7 1 ATOM 283 C C5 . DA C 1 4 ? 3.851 -7.604 11.487 1.00 21.01 ? 4 DA C C5 1 ATOM 284 C C6 . DA C 1 4 ? 3.776 -6.611 10.478 1.00 20.32 ? 4 DA C C6 1 ATOM 285 N N6 . DA C 1 4 ? 3.848 -6.860 9.160 1.00 16.56 ? 4 DA C N6 1 ATOM 286 N N1 . DA C 1 4 ? 3.618 -5.320 10.875 1.00 20.28 ? 4 DA C N1 1 ATOM 287 C C2 . DA C 1 4 ? 3.543 -5.049 12.185 1.00 20.37 ? 4 DA C C2 1 ATOM 288 N N3 . DA C 1 4 ? 3.597 -5.895 13.216 1.00 21.19 ? 4 DA C N3 1 ATOM 289 C C4 . DA C 1 4 ? 3.754 -7.171 12.803 1.00 22.53 ? 4 DA C C4 1 ATOM 290 P P . DC C 1 5 ? 1.325 -8.925 18.727 1.00 26.56 ? 5 DC C P 1 ATOM 291 O OP1 . DC C 1 5 ? 1.502 -8.800 20.195 1.00 26.24 ? 5 DC C OP1 1 ATOM 292 O OP2 . DC C 1 5 ? 0.800 -10.175 18.131 1.00 24.61 ? 5 DC C OP2 1 ATOM 293 O "O5'" . DC C 1 5 ? 0.339 -7.742 18.275 1.00 24.00 ? 5 DC C "O5'" 1 ATOM 294 C "C5'" . DC C 1 5 ? 0.797 -6.572 17.624 1.00 20.97 ? 5 DC C "C5'" 1 ATOM 295 C "C4'" . DC C 1 5 ? 0.015 -6.290 16.351 1.00 18.88 ? 5 DC C "C4'" 1 ATOM 296 O "O4'" . DC C 1 5 ? 0.632 -6.952 15.211 1.00 16.84 ? 5 DC C "O4'" 1 ATOM 297 C "C3'" . DC C 1 5 ? -1.435 -6.765 16.292 1.00 19.16 ? 5 DC C "C3'" 1 ATOM 298 O "O3'" . DC C 1 5 ? -2.265 -5.673 16.629 1.00 21.30 ? 5 DC C "O3'" 1 ATOM 299 C "C2'" . DC C 1 5 ? -1.626 -7.205 14.829 1.00 15.65 ? 5 DC C "C2'" 1 ATOM 300 C "C1'" . DC C 1 5 ? -0.310 -6.769 14.181 1.00 11.49 ? 5 DC C "C1'" 1 ATOM 301 N N1 . DC C 1 5 ? 0.082 -7.519 12.934 1.00 4.55 ? 5 DC C N1 1 ATOM 302 C C2 . DC C 1 5 ? 0.220 -6.838 11.709 1.00 2.00 ? 5 DC C C2 1 ATOM 303 O O2 . DC C 1 5 ? 0.020 -5.580 11.687 1.00 2.00 ? 5 DC C O2 1 ATOM 304 N N3 . DC C 1 5 ? 0.566 -7.574 10.604 1.00 2.00 ? 5 DC C N3 1 ATOM 305 C C4 . DC C 1 5 ? 0.754 -8.890 10.713 1.00 2.00 ? 5 DC C C4 1 ATOM 306 N N4 . DC C 1 5 ? 1.095 -9.554 9.610 1.00 2.00 ? 5 DC C N4 1 ATOM 307 C C5 . DC C 1 5 ? 0.621 -9.583 11.970 1.00 2.00 ? 5 DC C C5 1 ATOM 308 C C6 . DC C 1 5 ? 0.275 -8.860 13.030 1.00 2.00 ? 5 DC C C6 1 ATOM 309 P P . DG C 1 6 ? -3.821 -5.830 17.007 1.00 24.73 ? 6 DG C P 1 ATOM 310 O OP1 . DG C 1 6 ? -4.159 -4.606 17.787 1.00 24.72 ? 6 DG C OP1 1 ATOM 311 O OP2 . DG C 1 6 ? -4.059 -7.156 17.616 1.00 22.70 ? 6 DG C OP2 1 ATOM 312 O "O5'" . DG C 1 6 ? -4.558 -5.780 15.586 1.00 24.58 ? 6 DG C "O5'" 1 ATOM 313 C "C5'" . DG C 1 6 ? -5.011 -4.515 15.069 1.00 25.90 ? 6 DG C "C5'" 1 ATOM 314 C "C4'" . DG C 1 6 ? -6.162 -4.651 14.079 1.00 25.13 ? 6 DG C "C4'" 1 ATOM 315 O "O4'" . DG C 1 6 ? -5.786 -5.560 13.018 1.00 24.34 ? 6 DG C "O4'" 1 ATOM 316 C "C3'" . DG C 1 6 ? -7.458 -5.234 14.634 1.00 25.43 ? 6 DG C "C3'" 1 ATOM 317 O "O3'" . DG C 1 6 ? -8.254 -4.198 15.177 1.00 25.69 ? 6 DG C "O3'" 1 ATOM 318 C "C2'" . DG C 1 6 ? -8.126 -5.846 13.404 1.00 24.62 ? 6 DG C "C2'" 1 ATOM 319 C "C1'" . DG C 1 6 ? -6.950 -6.179 12.485 1.00 24.41 ? 6 DG C "C1'" 1 ATOM 320 N N9 . DG C 1 6 ? -6.700 -7.614 12.369 1.00 23.92 ? 6 DG C N9 1 ATOM 321 C C8 . DG C 1 6 ? -6.748 -8.542 13.386 1.00 24.05 ? 6 DG C C8 1 ATOM 322 N N7 . DG C 1 6 ? -6.491 -9.763 13.004 1.00 23.37 ? 6 DG C N7 1 ATOM 323 C C5 . DG C 1 6 ? -6.252 -9.638 11.640 1.00 23.54 ? 6 DG C C5 1 ATOM 324 C C6 . DG C 1 6 ? -5.899 -10.628 10.684 1.00 22.92 ? 6 DG C C6 1 ATOM 325 O O6 . DG C 1 6 ? -5.744 -11.848 10.849 1.00 22.81 ? 6 DG C O6 1 ATOM 326 N N1 . DG C 1 6 ? -5.744 -10.084 9.418 1.00 22.83 ? 6 DG C N1 1 ATOM 327 C C2 . DG C 1 6 ? -5.896 -8.752 9.107 1.00 23.17 ? 6 DG C C2 1 ATOM 328 N N2 . DG C 1 6 ? -5.706 -8.420 7.826 1.00 22.99 ? 6 DG C N2 1 ATOM 329 N N3 . DG C 1 6 ? -6.216 -7.815 9.994 1.00 23.43 ? 6 DG C N3 1 ATOM 330 C C4 . DG C 1 6 ? -6.374 -8.322 11.238 1.00 22.68 ? 6 DG C C4 1 ATOM 331 O "O5'" . DC D 1 1 ? 4.637 -0.271 -0.531 1.00 32.27 ? 7 DC D "O5'" 1 ATOM 332 C "C5'" . DC D 1 1 ? 4.291 -1.649 -0.523 1.00 33.97 ? 7 DC D "C5'" 1 ATOM 333 C "C4'" . DC D 1 1 ? 3.076 -1.940 -1.391 1.00 33.75 ? 7 DC D "C4'" 1 ATOM 334 O "O4'" . DC D 1 1 ? 3.298 -1.456 -2.746 1.00 35.05 ? 7 DC D "O4'" 1 ATOM 335 C "C3'" . DC D 1 1 ? 2.740 -3.429 -1.498 1.00 33.06 ? 7 DC D "C3'" 1 ATOM 336 O "O3'" . DC D 1 1 ? 1.398 -3.682 -1.051 1.00 29.47 ? 7 DC D "O3'" 1 ATOM 337 C "C2'" . DC D 1 1 ? 2.918 -3.754 -2.989 1.00 35.08 ? 7 DC D "C2'" 1 ATOM 338 C "C1'" . DC D 1 1 ? 2.762 -2.393 -3.667 1.00 35.88 ? 7 DC D "C1'" 1 ATOM 339 N N1 . DC D 1 1 ? 3.425 -2.296 -5.038 1.00 37.49 ? 7 DC D N1 1 ATOM 340 C C2 . DC D 1 1 ? 2.650 -2.391 -6.215 1.00 38.12 ? 7 DC D C2 1 ATOM 341 O O2 . DC D 1 1 ? 1.427 -2.552 -6.144 1.00 37.50 ? 7 DC D O2 1 ATOM 342 N N3 . DC D 1 1 ? 3.268 -2.315 -7.429 1.00 39.05 ? 7 DC D N3 1 ATOM 343 C C4 . DC D 1 1 ? 4.594 -2.145 -7.506 1.00 38.90 ? 7 DC D C4 1 ATOM 344 N N4 . DC D 1 1 ? 5.143 -2.070 -8.722 1.00 38.04 ? 7 DC D N4 1 ATOM 345 C C5 . DC D 1 1 ? 5.404 -2.046 -6.329 1.00 38.89 ? 7 DC D C5 1 ATOM 346 C C6 . DC D 1 1 ? 4.785 -2.128 -5.141 1.00 38.24 ? 7 DC D C6 1 ATOM 347 P P . DG D 1 2 ? 1.042 -4.567 0.248 1.00 27.67 ? 8 DG D P 1 ATOM 348 O OP1 . DG D 1 2 ? 2.154 -5.517 0.548 1.00 25.98 ? 8 DG D OP1 1 ATOM 349 O OP2 . DG D 1 2 ? -0.323 -5.105 0.088 1.00 23.63 ? 8 DG D OP2 1 ATOM 350 O "O5'" . DG D 1 2 ? 0.974 -3.419 1.362 1.00 25.16 ? 8 DG D "O5'" 1 ATOM 351 C "C5'" . DG D 1 2 ? -0.211 -2.615 1.367 1.00 23.84 ? 8 DG D "C5'" 1 ATOM 352 C "C4'" . DG D 1 2 ? -0.369 -1.763 2.602 1.00 21.00 ? 8 DG D "C4'" 1 ATOM 353 O "O4'" . DG D 1 2 ? -1.061 -2.529 3.617 1.00 20.05 ? 8 DG D "O4'" 1 ATOM 354 C "C3'" . DG D 1 2 ? 0.953 -1.309 3.182 1.00 21.67 ? 8 DG D "C3'" 1 ATOM 355 O "O3'" . DG D 1 2 ? 1.064 0.089 2.976 1.00 24.88 ? 8 DG D "O3'" 1 ATOM 356 C "C2'" . DG D 1 2 ? 0.850 -1.635 4.665 1.00 20.50 ? 8 DG D "C2'" 1 ATOM 357 C "C1'" . DG D 1 2 ? -0.316 -2.596 4.803 1.00 16.30 ? 8 DG D "C1'" 1 ATOM 358 N N9 . DG D 1 2 ? 0.043 -3.977 5.111 1.00 12.79 ? 8 DG D N9 1 ATOM 359 C C8 . DG D 1 2 ? 0.305 -5.048 4.271 1.00 13.82 ? 8 DG D C8 1 ATOM 360 N N7 . DG D 1 2 ? 0.572 -6.163 4.922 1.00 11.46 ? 8 DG D N7 1 ATOM 361 C C5 . DG D 1 2 ? 0.478 -5.813 6.260 1.00 8.49 ? 8 DG D C5 1 ATOM 362 C C6 . DG D 1 2 ? 0.660 -6.563 7.456 1.00 7.30 ? 8 DG D C6 1 ATOM 363 O O6 . DG D 1 2 ? 0.941 -7.765 7.551 1.00 4.59 ? 8 DG D O6 1 ATOM 364 N N1 . DG D 1 2 ? 0.466 -5.780 8.615 1.00 3.76 ? 8 DG D N1 1 ATOM 365 C C2 . DG D 1 2 ? 0.135 -4.447 8.616 1.00 4.62 ? 8 DG D C2 1 ATOM 366 N N2 . DG D 1 2 ? -0.038 -3.793 9.781 1.00 5.68 ? 8 DG D N2 1 ATOM 367 N N3 . DG D 1 2 ? -0.034 -3.752 7.509 1.00 8.67 ? 8 DG D N3 1 ATOM 368 C C4 . DG D 1 2 ? 0.145 -4.479 6.379 1.00 10.21 ? 8 DG D C4 1 ATOM 369 P P . DT D 1 3 ? 2.361 0.872 3.473 1.00 27.40 ? 9 DT D P 1 ATOM 370 O OP1 . DT D 1 3 ? 2.206 2.287 3.054 1.00 27.65 ? 9 DT D OP1 1 ATOM 371 O OP2 . DT D 1 3 ? 3.542 0.071 3.036 1.00 26.42 ? 9 DT D OP2 1 ATOM 372 O "O5'" . DT D 1 3 ? 2.240 0.814 5.062 1.00 26.20 ? 9 DT D "O5'" 1 ATOM 373 C "C5'" . DT D 1 3 ? 1.601 1.860 5.794 1.00 24.99 ? 9 DT D "C5'" 1 ATOM 374 C "C4'" . DT D 1 3 ? 1.933 1.722 7.267 1.00 23.03 ? 9 DT D "C4'" 1 ATOM 375 O "O4'" . DT D 1 3 ? 1.927 0.318 7.619 1.00 22.11 ? 9 DT D "O4'" 1 ATOM 376 C "C3'" . DT D 1 3 ? 3.304 2.226 7.704 1.00 22.40 ? 9 DT D "C3'" 1 ATOM 377 O "O3'" . DT D 1 3 ? 3.194 2.694 9.055 1.00 21.67 ? 9 DT D "O3'" 1 ATOM 378 C "C2'" . DT D 1 3 ? 4.146 0.960 7.606 1.00 23.03 ? 9 DT D "C2'" 1 ATOM 379 C "C1'" . DT D 1 3 ? 3.161 -0.054 8.180 1.00 21.88 ? 9 DT D "C1'" 1 ATOM 380 N N1 . DT D 1 3 ? 3.369 -1.504 7.845 1.00 21.90 ? 9 DT D N1 1 ATOM 381 C C2 . DT D 1 3 ? 3.407 -2.437 8.870 1.00 21.07 ? 9 DT D C2 1 ATOM 382 O O2 . DT D 1 3 ? 3.301 -2.149 10.045 1.00 20.57 ? 9 DT D O2 1 ATOM 383 N N3 . DT D 1 3 ? 3.580 -3.734 8.464 1.00 20.42 ? 9 DT D N3 1 ATOM 384 C C4 . DT D 1 3 ? 3.712 -4.183 7.156 1.00 20.44 ? 9 DT D C4 1 ATOM 385 O O4 . DT D 1 3 ? 3.863 -5.370 6.882 1.00 18.50 ? 9 DT D O4 1 ATOM 386 C C5 . DT D 1 3 ? 3.658 -3.157 6.135 1.00 21.06 ? 9 DT D C5 1 ATOM 387 C C7 . DT D 1 3 ? 3.785 -3.513 4.674 1.00 21.27 ? 9 DT D C7 1 ATOM 388 C C6 . DT D 1 3 ? 3.489 -1.891 6.527 1.00 20.53 ? 9 DT D C6 1 ATOM 389 P P . DA D 1 4 ? 4.369 3.502 9.794 1.00 22.89 ? 10 DA D P 1 ATOM 390 O OP1 . DA D 1 4 ? 3.729 4.629 10.508 1.00 20.15 ? 10 DA D OP1 1 ATOM 391 O OP2 . DA D 1 4 ? 5.479 3.734 8.834 1.00 21.98 ? 10 DA D OP2 1 ATOM 392 O "O5'" . DA D 1 4 ? 4.881 2.451 10.881 1.00 20.48 ? 10 DA D "O5'" 1 ATOM 393 C "C5'" . DA D 1 4 ? 3.938 1.890 11.793 1.00 17.83 ? 10 DA D "C5'" 1 ATOM 394 C "C4'" . DA D 1 4 ? 4.665 1.358 13.002 1.00 15.71 ? 10 DA D "C4'" 1 ATOM 395 O "O4'" . DA D 1 4 ? 4.912 -0.048 12.784 1.00 13.87 ? 10 DA D "O4'" 1 ATOM 396 C "C3'" . DA D 1 4 ? 6.020 1.992 13.262 1.00 15.99 ? 10 DA D "C3'" 1 ATOM 397 O "O3'" . DA D 1 4 ? 6.167 2.129 14.676 1.00 18.46 ? 10 DA D "O3'" 1 ATOM 398 C "C2'" . DA D 1 4 ? 7.014 1.041 12.585 1.00 13.36 ? 10 DA D "C2'" 1 ATOM 399 C "C1'" . DA D 1 4 ? 6.274 -0.293 12.528 1.00 9.79 ? 10 DA D "C1'" 1 ATOM 400 N N9 . DA D 1 4 ? 6.384 -1.065 11.280 1.00 5.15 ? 10 DA D N9 1 ATOM 401 C C8 . DA D 1 4 ? 6.376 -0.616 9.982 1.00 2.00 ? 10 DA D C8 1 ATOM 402 N N7 . DA D 1 4 ? 6.470 -1.588 9.098 1.00 2.80 ? 10 DA D N7 1 ATOM 403 C C5 . DA D 1 4 ? 6.594 -2.748 9.870 1.00 2.00 ? 10 DA D C5 1 ATOM 404 C C6 . DA D 1 4 ? 6.719 -4.133 9.582 1.00 2.00 ? 10 DA D C6 1 ATOM 405 N N6 . DA D 1 4 ? 6.800 -4.602 8.325 1.00 2.00 ? 10 DA D N6 1 ATOM 406 N N1 . DA D 1 4 ? 6.805 -5.034 10.620 1.00 2.00 ? 10 DA D N1 1 ATOM 407 C C2 . DA D 1 4 ? 6.702 -4.580 11.881 1.00 2.00 ? 10 DA D C2 1 ATOM 408 N N3 . DA D 1 4 ? 6.559 -3.298 12.249 1.00 2.00 ? 10 DA D N3 1 ATOM 409 C C4 . DA D 1 4 ? 6.515 -2.444 11.206 1.00 2.00 ? 10 DA D C4 1 ATOM 410 P P . DC D 1 5 ? 7.356 2.954 15.363 1.00 19.74 ? 11 DC D P 1 ATOM 411 O OP1 . DC D 1 5 ? 6.882 3.448 16.668 1.00 20.16 ? 11 DC D OP1 1 ATOM 412 O OP2 . DC D 1 5 ? 8.005 3.883 14.404 1.00 21.22 ? 11 DC D OP2 1 ATOM 413 O "O5'" . DC D 1 5 ? 8.375 1.749 15.614 1.00 19.69 ? 11 DC D "O5'" 1 ATOM 414 C "C5'" . DC D 1 5 ? 7.898 0.470 16.010 1.00 17.85 ? 11 DC D "C5'" 1 ATOM 415 C "C4'" . DC D 1 5 ? 9.016 -0.553 15.948 1.00 18.17 ? 11 DC D "C4'" 1 ATOM 416 O "O4'" . DC D 1 5 ? 8.886 -1.307 14.716 1.00 18.55 ? 11 DC D "O4'" 1 ATOM 417 C "C3'" . DC D 1 5 ? 10.452 0.009 15.985 1.00 17.93 ? 11 DC D "C3'" 1 ATOM 418 O "O3'" . DC D 1 5 ? 11.201 -0.695 17.017 1.00 16.87 ? 11 DC D "O3'" 1 ATOM 419 C "C2'" . DC D 1 5 ? 10.930 -0.223 14.545 1.00 17.73 ? 11 DC D "C2'" 1 ATOM 420 C "C1'" . DC D 1 5 ? 10.184 -1.510 14.205 1.00 19.20 ? 11 DC D "C1'" 1 ATOM 421 N N1 . DC D 1 5 ? 10.121 -1.918 12.747 1.00 20.07 ? 11 DC D N1 1 ATOM 422 C C2 . DC D 1 5 ? 10.252 -3.278 12.434 1.00 21.34 ? 11 DC D C2 1 ATOM 423 O O2 . DC D 1 5 ? 10.407 -4.108 13.350 1.00 23.55 ? 11 DC D O2 1 ATOM 424 N N3 . DC D 1 5 ? 10.201 -3.653 11.130 1.00 20.99 ? 11 DC D N3 1 ATOM 425 C C4 . DC D 1 5 ? 10.027 -2.730 10.168 1.00 19.51 ? 11 DC D C4 1 ATOM 426 N N4 . DC D 1 5 ? 9.988 -3.149 8.901 1.00 17.91 ? 11 DC D N4 1 ATOM 427 C C5 . DC D 1 5 ? 9.885 -1.345 10.466 1.00 18.50 ? 11 DC D C5 1 ATOM 428 C C6 . DC D 1 5 ? 9.943 -0.988 11.753 1.00 19.60 ? 11 DC D C6 1 ATOM 429 P P . DG D 1 6 ? 12.715 -0.392 17.497 1.00 17.22 ? 12 DG D P 1 ATOM 430 O OP1 . DG D 1 6 ? 13.157 -1.502 18.372 1.00 14.79 ? 12 DG D OP1 1 ATOM 431 O OP2 . DG D 1 6 ? 12.788 0.990 17.998 1.00 16.44 ? 12 DG D OP2 1 ATOM 432 O "O5'" . DG D 1 6 ? 13.550 -0.511 16.144 1.00 19.92 ? 12 DG D "O5'" 1 ATOM 433 C "C5'" . DG D 1 6 ? 13.815 -1.811 15.607 1.00 22.89 ? 12 DG D "C5'" 1 ATOM 434 C "C4'" . DG D 1 6 ? 15.174 -1.803 14.944 1.00 25.09 ? 12 DG D "C4'" 1 ATOM 435 O "O4'" . DG D 1 6 ? 15.184 -0.742 13.960 1.00 26.87 ? 12 DG D "O4'" 1 ATOM 436 C "C3'" . DG D 1 6 ? 16.324 -1.519 15.895 1.00 24.90 ? 12 DG D "C3'" 1 ATOM 437 O "O3'" . DG D 1 6 ? 16.995 -2.720 16.179 1.00 24.89 ? 12 DG D "O3'" 1 ATOM 438 C "C2'" . DG D 1 6 ? 17.221 -0.582 15.091 1.00 26.89 ? 12 DG D "C2'" 1 ATOM 439 C "C1'" . DG D 1 6 ? 16.220 0.175 14.228 1.00 27.55 ? 12 DG D "C1'" 1 ATOM 440 N N9 . DG D 1 6 ? 15.602 1.343 14.844 1.00 29.93 ? 12 DG D N9 1 ATOM 441 C C8 . DG D 1 6 ? 15.952 1.966 16.020 1.00 30.19 ? 12 DG D C8 1 ATOM 442 N N7 . DG D 1 6 ? 15.198 2.987 16.309 1.00 31.44 ? 12 DG D N7 1 ATOM 443 C C5 . DG D 1 6 ? 14.281 3.047 15.265 1.00 32.27 ? 12 DG D C5 1 ATOM 444 C C6 . DG D 1 6 ? 13.209 3.950 15.034 1.00 33.57 ? 12 DG D C6 1 ATOM 445 O O6 . DG D 1 6 ? 12.856 4.910 15.739 1.00 35.23 ? 12 DG D O6 1 ATOM 446 N N1 . DG D 1 6 ? 12.519 3.660 13.855 1.00 32.96 ? 12 DG D N1 1 ATOM 447 C C2 . DG D 1 6 ? 12.838 2.619 13.004 1.00 32.56 ? 12 DG D C2 1 ATOM 448 N N2 . DG D 1 6 ? 12.083 2.477 11.909 1.00 32.11 ? 12 DG D N2 1 ATOM 449 N N3 . DG D 1 6 ? 13.837 1.771 13.209 1.00 32.01 ? 12 DG D N3 1 ATOM 450 C C4 . DG D 1 6 ? 14.516 2.039 14.354 1.00 31.45 ? 12 DG D C4 1 HETATM 451 CA CA . CA E 2 . ? 12.273 -2.830 20.982 1.00 45.38 ? 101 CA B CA 1 HETATM 452 C C36 . KPT F 3 . ? -2.558 -10.842 12.762 1.00 38.26 ? 101 KPT C C36 1 HETATM 453 O O4 . KPT F 3 . ? -2.078 -11.538 11.593 1.00 37.50 ? 101 KPT C O4 1 HETATM 454 O O3 . KPT F 3 . ? -2.785 -9.499 12.293 1.00 37.94 ? 101 KPT C O3 1 HETATM 455 C C18 . KPT F 3 . ? -2.588 -9.477 10.942 1.00 38.28 ? 101 KPT C C18 1 HETATM 456 C C13 . KPT F 3 . ? -2.758 -8.427 10.054 1.00 38.12 ? 101 KPT C C13 1 HETATM 457 C C14 . KPT F 3 . ? -3.184 -7.173 10.479 1.00 38.45 ? 101 KPT C C14 1 HETATM 458 C C17 . KPT F 3 . ? -2.164 -10.703 10.520 1.00 38.01 ? 101 KPT C C17 1 HETATM 459 C C16 . KPT F 3 . ? -1.880 -10.971 9.184 1.00 38.27 ? 101 KPT C C16 1 HETATM 460 C C15 . KPT F 3 . ? -2.048 -9.924 8.272 1.00 38.72 ? 101 KPT C C15 1 HETATM 461 C C12 . KPT F 3 . ? -2.489 -8.664 8.706 1.00 38.33 ? 101 KPT C C12 1 HETATM 462 C C11 . KPT F 3 . ? -2.652 -7.621 7.801 1.00 38.25 ? 101 KPT C C11 1 HETATM 463 C C10 . KPT F 3 . ? -3.086 -6.374 8.268 1.00 38.81 ? 101 KPT C C10 1 HETATM 464 N N . KPT F 3 . ? -3.350 -6.181 9.587 1.00 38.62 ? 101 KPT C N 1 HETATM 465 C C9 . KPT F 3 . ? -3.806 -4.880 10.102 1.00 38.59 ? 101 KPT C C9 1 HETATM 466 C C8 . KPT F 3 . ? -3.268 -3.707 9.282 1.00 38.73 ? 101 KPT C C8 1 HETATM 467 C C6 . KPT F 3 . ? -3.290 -5.338 7.358 1.00 38.88 ? 101 KPT C C6 1 HETATM 468 C C5 . KPT F 3 . ? -3.414 -4.015 7.807 1.00 38.86 ? 101 KPT C C5 1 HETATM 469 C C4 . KPT F 3 . ? -3.657 -2.975 6.904 1.00 39.25 ? 101 KPT C C4 1 HETATM 470 C C7 . KPT F 3 . ? -3.449 -5.648 5.999 1.00 38.94 ? 101 KPT C C7 1 HETATM 471 C C3 . KPT F 3 . ? -3.684 -4.598 5.121 1.00 39.39 ? 101 KPT C C3 1 HETATM 472 C C2 . KPT F 3 . ? -3.787 -3.313 5.558 1.00 39.37 ? 101 KPT C C2 1 HETATM 473 O O2 . KPT F 3 . ? -4.020 -2.500 4.487 1.00 40.24 ? 101 KPT C O2 1 HETATM 474 O O1 . KPT F 3 . ? -3.859 -4.639 3.766 1.00 40.36 ? 101 KPT C O1 1 HETATM 475 C C1 . KPT F 3 . ? -4.157 -3.310 3.303 1.00 40.40 ? 101 KPT C C1 1 HETATM 476 O O . HOH G 4 . ? 20.061 -2.300 14.628 1.00 16.60 ? 101 HOH A O 1 HETATM 477 O O . HOH G 4 . ? 27.495 -2.617 20.184 1.00 14.51 ? 102 HOH A O 1 HETATM 478 O O . HOH G 4 . ? 29.020 4.365 6.636 1.00 19.94 ? 103 HOH A O 1 HETATM 479 O O . HOH G 4 . ? 24.601 10.419 1.261 1.00 22.68 ? 104 HOH A O 1 HETATM 480 O O . HOH G 4 . ? 11.354 6.343 1.604 1.00 22.61 ? 105 HOH A O 1 HETATM 481 O O . HOH G 4 . ? 21.523 7.037 12.871 1.00 25.99 ? 106 HOH A O 1 HETATM 482 O O . HOH H 4 . ? 8.391 -10.044 20.660 1.00 20.89 ? 201 HOH B O 1 HETATM 483 O O . HOH H 4 . ? 17.952 -3.282 3.156 1.00 30.51 ? 202 HOH B O 1 HETATM 484 O O . HOH I 4 . ? -6.911 -4.741 17.977 1.00 19.00 ? 201 HOH C O 1 HETATM 485 O O . HOH I 4 . ? 0.542 -8.977 23.422 1.00 29.66 ? 202 HOH C O 1 HETATM 486 O O . HOH J 4 . ? 12.359 7.615 15.699 1.00 16.51 ? 101 HOH D O 1 HETATM 487 O O . HOH J 4 . ? 6.092 2.875 1.068 1.00 23.77 ? 102 HOH D O 1 HETATM 488 O O . HOH J 4 . ? 6.215 -2.872 14.867 1.00 11.69 ? 103 HOH D O 1 HETATM 489 O O . HOH J 4 . ? 2.484 -8.094 3.396 1.00 27.93 ? 104 HOH D O 1 HETATM 490 O O . HOH J 4 . ? 3.732 3.080 16.520 1.00 33.59 ? 105 HOH D O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n B 1 1 DC 1 7 7 DC C B . n B 1 2 DG 2 8 8 DG G B . n B 1 3 DT 3 9 9 DT T B . n B 1 4 DA 4 10 10 DA A B . n B 1 5 DC 5 11 11 DC C B . n B 1 6 DG 6 12 12 DG G B . n C 1 1 DC 1 1 1 DC C C . n C 1 2 DG 2 2 2 DG G C . n C 1 3 DT 3 3 3 DT T C . n C 1 4 DA 4 4 4 DA A C . n C 1 5 DC 5 5 5 DC C C . n C 1 6 DG 6 6 6 DG G C . n D 1 1 DC 1 7 7 DC C D . n D 1 2 DG 2 8 8 DG G D . n D 1 3 DT 3 9 9 DT T D . n D 1 4 DA 4 10 10 DA A D . n D 1 5 DC 5 11 11 DC C D . n D 1 6 DG 6 12 12 DG G D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CA 1 101 1 CA CA B . F 3 KPT 1 101 1 KPT KPT C . G 4 HOH 1 101 1 HOH HOH A . G 4 HOH 2 102 6 HOH HOH A . G 4 HOH 3 103 8 HOH HOH A . G 4 HOH 4 104 9 HOH HOH A . G 4 HOH 5 105 11 HOH HOH A . G 4 HOH 6 106 14 HOH HOH A . H 4 HOH 1 201 7 HOH HOH B . H 4 HOH 2 202 10 HOH HOH B . I 4 HOH 1 201 3 HOH HOH C . I 4 HOH 2 202 12 HOH HOH C . J 4 HOH 1 101 2 HOH HOH D . J 4 HOH 2 102 4 HOH HOH D . J 4 HOH 3 103 5 HOH HOH D . J 4 HOH 4 104 13 HOH HOH D . J 4 HOH 5 105 15 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H 2 1 C,D,F,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 350 ? 1 MORE -3 ? 1 'SSA (A^2)' 2700 ? 2 'ABSA (A^2)' 580 ? 2 MORE -8 ? 2 'SSA (A^2)' 2720 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OP1 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id DG _pdbx_struct_conn_angle.ptnr1_label_seq_id 6 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id DG _pdbx_struct_conn_angle.ptnr1_auth_seq_id 12 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id CA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id E _pdbx_struct_conn_angle.ptnr2_label_comp_id CA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id CA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OP1 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id DG _pdbx_struct_conn_angle.ptnr3_label_seq_id 6 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id D _pdbx_struct_conn_angle.ptnr3_auth_comp_id DG _pdbx_struct_conn_angle.ptnr3_auth_seq_id 12 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 65.5 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-23 2 'Structure model' 1 1 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 4 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 11 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 14 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 4D9X _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.500 _pdbx_phasing_MR.d_res_low_rotation 26.230 _pdbx_phasing_MR.d_res_high_translation 3.500 _pdbx_phasing_MR.d_res_low_translation 26.230 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrysalisPro . ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 XDS . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.20 108.30 1.90 0.30 N 2 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 110.93 108.30 2.63 0.30 N 3 1 "O4'" C DT 3 ? ? "C1'" C DT 3 ? ? N1 C DT 3 ? ? 112.38 108.30 4.08 0.30 N 4 1 "O4'" C DA 4 ? ? "C1'" C DA 4 ? ? N9 C DA 4 ? ? 111.50 108.30 3.20 0.30 N 5 1 "C1'" C DC 5 ? ? "O4'" C DC 5 ? ? "C4'" C DC 5 ? ? 103.31 110.10 -6.79 1.00 N 6 1 "O4'" C DC 5 ? ? "C1'" C DC 5 ? ? N1 C DC 5 ? ? 111.51 108.30 3.21 0.30 N 7 1 "O4'" D DC 7 ? ? "C1'" D DC 7 ? ? N1 D DC 7 ? ? 112.15 108.30 3.85 0.30 N 8 1 "O4'" D DG 8 ? ? "C1'" D DG 8 ? ? N9 D DG 8 ? ? 110.75 108.30 2.45 0.30 N 9 1 N1 D DA 10 ? ? C2 D DA 10 ? ? N3 D DA 10 ? ? 126.04 129.30 -3.26 0.50 N 10 1 "O4'" D DC 11 ? ? "C1'" D DC 11 ? ? N1 D DC 11 ? ? 110.44 108.30 2.14 0.30 N 11 1 "C3'" D DC 11 ? ? "O3'" D DC 11 ? ? P D DG 12 ? ? 126.96 119.70 7.26 1.20 Y # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DC 1 ? "O5'" ? A DC 1 "O5'" 2 1 Y 1 A DC 1 ? "C5'" ? A DC 1 "C5'" 3 1 Y 1 A DC 1 ? "C4'" ? A DC 1 "C4'" 4 1 Y 1 A DC 1 ? "O4'" ? A DC 1 "O4'" 5 1 Y 1 A DC 1 ? "C3'" ? A DC 1 "C3'" 6 1 Y 1 A DC 1 ? "C2'" ? A DC 1 "C2'" 7 1 Y 1 A DC 1 ? "C1'" ? A DC 1 "C1'" 8 1 Y 1 A DC 1 ? N1 ? A DC 1 N1 9 1 Y 1 A DC 1 ? C2 ? A DC 1 C2 10 1 Y 1 A DC 1 ? O2 ? A DC 1 O2 11 1 Y 1 A DC 1 ? N3 ? A DC 1 N3 12 1 Y 1 A DC 1 ? C4 ? A DC 1 C4 13 1 Y 1 A DC 1 ? N4 ? A DC 1 N4 14 1 Y 1 A DC 1 ? C5 ? A DC 1 C5 15 1 Y 1 A DC 1 ? C6 ? A DC 1 C6 16 1 Y 1 C DC 1 ? "O5'" ? C DC 1 "O5'" 17 1 Y 1 C DC 1 ? "C5'" ? C DC 1 "C5'" 18 1 Y 1 C DC 1 ? "C4'" ? C DC 1 "C4'" 19 1 Y 1 C DC 1 ? "O4'" ? C DC 1 "O4'" 20 1 Y 1 C DC 1 ? "C3'" ? C DC 1 "C3'" 21 1 Y 1 C DC 1 ? "C2'" ? C DC 1 "C2'" 22 1 Y 1 C DC 1 ? "C1'" ? C DC 1 "C1'" 23 1 Y 1 C DC 1 ? N1 ? C DC 1 N1 24 1 Y 1 C DC 1 ? C2 ? C DC 1 C2 25 1 Y 1 C DC 1 ? O2 ? C DC 1 O2 26 1 Y 1 C DC 1 ? N3 ? C DC 1 N3 27 1 Y 1 C DC 1 ? C4 ? C DC 1 C4 28 1 Y 1 C DC 1 ? N4 ? C DC 1 N4 29 1 Y 1 C DC 1 ? C5 ? C DC 1 C5 30 1 Y 1 C DC 1 ? C6 ? C DC 1 C6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 KPT C36 C N N 148 KPT O4 O N N 149 KPT O3 O N N 150 KPT C18 C Y N 151 KPT C13 C Y N 152 KPT C14 C Y N 153 KPT C17 C Y N 154 KPT C16 C Y N 155 KPT C15 C Y N 156 KPT C12 C Y N 157 KPT C11 C Y N 158 KPT C10 C Y N 159 KPT N N Y N 160 KPT C9 C N N 161 KPT C8 C N N 162 KPT C6 C Y N 163 KPT C5 C Y N 164 KPT C4 C Y N 165 KPT C7 C Y N 166 KPT C3 C Y N 167 KPT C2 C Y N 168 KPT O2 O N N 169 KPT O1 O N N 170 KPT C1 C N N 171 KPT H1 H N N 172 KPT H21 H N N 173 KPT H2 H N N 174 KPT H3 H N N 175 KPT H4 H N N 176 KPT H5 H N N 177 KPT H6 H N N 178 KPT H7 H N N 179 KPT H8 H N N 180 KPT H9 H N N 181 KPT H10 H N N 182 KPT H11 H N N 183 KPT H12 H N N 184 KPT H14 H N N 185 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 KPT O4 C36 sing N N 152 KPT O3 C36 sing N N 153 KPT C18 O3 sing N N 154 KPT C13 C14 sing Y N 155 KPT C13 C18 sing Y N 156 KPT C17 C18 doub Y N 157 KPT C17 O4 sing N N 158 KPT C16 C17 sing Y N 159 KPT C15 C12 sing Y N 160 KPT C15 C16 doub Y N 161 KPT C12 C13 doub Y N 162 KPT C11 C10 doub Y N 163 KPT C11 C12 sing Y N 164 KPT C10 N sing Y N 165 KPT N C9 sing N N 166 KPT N C14 doub Y N 167 KPT C8 C9 sing N N 168 KPT C6 C5 sing Y N 169 KPT C6 C10 sing N N 170 KPT C5 C8 sing N N 171 KPT C4 C5 doub Y N 172 KPT C7 C6 doub Y N 173 KPT C3 C2 doub Y N 174 KPT C3 C7 sing Y N 175 KPT C2 C4 sing Y N 176 KPT O2 C2 sing N N 177 KPT O1 C3 sing N N 178 KPT C1 O1 sing N N 179 KPT C1 O2 sing N N 180 KPT C36 H1 sing N N 181 KPT C36 H21 sing N N 182 KPT C14 H2 sing N N 183 KPT C16 H3 sing N N 184 KPT C15 H4 sing N N 185 KPT C11 H5 sing N N 186 KPT C9 H6 sing N N 187 KPT C9 H7 sing N N 188 KPT C8 H8 sing N N 189 KPT C8 H9 sing N N 190 KPT C4 H10 sing N N 191 KPT C7 H11 sing N N 192 KPT C1 H12 sing N N 193 KPT C1 H14 sing N N 194 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4D9X 'double helix' 4D9X 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 A DC 5 1_555 -0.768 -0.336 0.614 -15.612 -3.056 -2.049 1 B_DG8:DC5_A B 8 ? A 5 ? 19 1 1 B DT 3 1_555 A DA 4 1_555 -0.731 -0.146 -0.110 1.023 -4.553 -5.999 2 B_DT9:DA4_A B 9 ? A 4 ? 20 1 1 B DA 4 1_555 A DT 3 1_555 -0.333 0.193 0.259 -2.342 -5.190 2.444 3 B_DA10:DT3_A B 10 ? A 3 ? 20 1 1 B DC 5 1_555 A DG 2 1_555 0.610 -0.077 0.344 5.280 -1.288 3.125 4 B_DC11:DG2_A B 11 ? A 2 ? 19 1 1 C DG 2 1_555 D DC 5 1_555 0.084 -0.386 0.159 -7.651 4.011 -2.688 5 C_DG2:DC11_D C 2 ? D 11 ? 19 1 1 C DT 3 1_555 D DA 4 1_555 -0.942 -0.226 -0.062 -3.538 -1.670 -4.216 6 C_DT3:DA10_D C 3 ? D 10 ? 20 1 1 C DA 4 1_555 D DT 3 1_555 -0.490 -0.254 0.021 -0.827 -1.337 -6.888 7 C_DA4:DT9_D C 4 ? D 9 ? 20 1 1 C DC 5 1_555 D DG 2 1_555 0.719 -0.461 -0.118 11.972 -0.651 1.207 8 C_DC5:DG8_D C 5 ? D 8 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 A DC 5 1_555 B DT 3 1_555 A DA 4 1_555 -1.166 -0.723 2.976 5.197 6.999 31.137 -2.365 2.886 2.536 12.728 -9.451 32.306 1 BB_DG8DT9:DA4DC5_AA B 8 ? A 5 ? B 9 ? A 4 ? 1 B DT 3 1_555 A DA 4 1_555 B DA 4 1_555 A DT 3 1_555 0.047 -0.105 3.296 -4.488 -2.481 41.695 0.114 -0.536 3.274 -3.470 6.276 41.995 2 BB_DT9DA10:DT3DA4_AA B 9 ? A 4 ? B 10 ? A 3 ? 1 B DA 4 1_555 A DT 3 1_555 B DC 5 1_555 A DG 2 1_555 0.394 -0.419 3.317 -1.046 3.965 30.432 -1.573 -0.951 3.223 7.511 1.982 30.700 3 BB_DA10DC11:DG2DT3_AA B 10 ? A 3 ? B 11 ? A 2 ? 1 B DC 5 1_555 A DG 2 1_555 C DG 2 1_555 D DC 5 1_555 -0.169 1.299 3.550 2.231 4.825 -69.551 -1.322 -0.062 3.469 -4.224 1.953 -69.729 4 BC_DC11DG2:DC11DG2_DA B 11 ? A 2 ? C 2 ? D 11 ? 1 C DG 2 1_555 D DC 5 1_555 C DT 3 1_555 D DA 4 1_555 -0.293 -0.657 3.320 1.421 2.043 19.420 -2.928 1.553 3.205 6.025 -4.190 19.578 5 CC_DG2DT3:DA10DC11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DT 3 1_555 D DA 4 1_555 C DA 4 1_555 D DT 3 1_555 0.280 -0.410 3.185 1.601 1.470 40.089 -0.760 -0.230 3.177 2.142 -2.334 40.145 6 CC_DT3DA4:DT9DA10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DA 4 1_555 D DT 3 1_555 C DC 5 1_555 D DG 2 1_555 1.349 -0.300 3.133 -0.508 6.036 33.725 -1.409 -2.367 3.016 10.300 0.867 34.249 7 CC_DA4DC5:DG8DT9_DD C 4 ? D 9 ? C 5 ? D 8 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 '6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium' KPT 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3NP6 _pdbx_initial_refinement_model.details 'PDB ENTRY 3NP6' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.fraction _pdbx_reflns_twin.operator _pdbx_reflns_twin.type _pdbx_reflns_twin.mean_F_square_over_mean_F2 _pdbx_reflns_twin.mean_I2_over_mean_I_square 1 1 1 0.789 'H, K, L' ? ? ? 2 1 1 0.211 h+k,-k,-l ? ? ? #