0.019798 0.011430 0.000000 0.000000 0.022861 0.000000 0.000000 0.000000 0.019335 0.00000 0.00000 0.00000 Collie, G.W. Neidle, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 50.510 50.510 51.720 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer K 1 39.098 POTASSIUM ION non-polymer C46 H72 N12 O4 857.142 2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C Y 49 N N Y 50 N C Y 51 N N Y 52 N C N 53 N C N 54 N O N 55 N N N 56 N C N 57 N N N 58 N N Y 59 N C N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 N C N 85 R C N 86 N N N 87 N C N 88 N O N 89 N N N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N H N 112 N H N 113 N K N 114 N C N 115 N C N 116 N C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N O Y 122 N C Y 123 N C N 124 N C N 125 N C N 126 N C N 127 N C N 128 N C N 129 N C N 130 N C N 131 N C N 132 N C N 133 N C N 134 N C N 135 N C N 136 N C N 137 N C N 138 N C N 139 N C N 140 N C N 141 N C N 142 N C N 143 N C N 144 N C N 145 N C N 146 N C N 147 N C N 148 N C N 149 N C N 150 N C N 151 N C N 152 N N N 153 N N Y 154 N C Y 155 N C N 156 N C N 157 N C N 158 N C N 159 N C Y 160 N C Y 161 N C Y 162 N C Y 163 N C Y 164 N C Y 165 N C N 166 N N N 167 N N N 168 N N N 169 N N N 170 N N N 171 N N N 172 N N N 173 N N N 174 N N N 175 N N N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing Y 62 N sing Y 63 N sing Y 64 N doub N 65 N sing Y 66 N sing N 67 N sing Y 68 N doub N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub Y 135 N doub Y 136 N sing Y 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing Y 144 N doub N 145 N sing N 146 N sing N 147 N sing Y 148 N doub N 149 N sing N 150 N sing N 151 N sing Y 152 N sing Y 153 N sing Y 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub Y 161 N doub N 162 N sing Y 163 N doub N 164 N doub Y 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 56 2959 2974 10.1021/jm301899y 23514618 Structure-based design and evaluation of naphthalene diimide g-quadruplex ligands as telomere targeting agents in pancreatic cancer cells. 2013 10.2210/pdb4daq/pdb pdb_00004daq 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2011-12-16 ADSC QUANTUM 315r Si 111 CHANNEL SINGLE WAVELENGTH M x-ray 1 0.9795 1.0 I04 Diamond 0.9795 SYNCHROTRON DIAMOND BEAMLINE I04 6670.290 DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') 1 syn polymer 39.098 POTASSIUM ION 3 syn non-polymer 857.142 2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone 1 syn non-polymer 18.015 water 8 nat water no no (DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG) (DG) GGGTTAGGGTTAGGGTTAGGG A polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n 1 2.86 56.92 VAPOR DIFFUSION, HANGING DROP 6.5 15% PEG400, 150 mM sodium chloride and 50 mM sodium cacodylate (pH 6.5), VAPOR DIFFUSION, HANGING DROP, temperature 285K 285 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Database references Database references Data collection Database references Derived calculations Refinement description 1 0 2013-01-16 1 1 2013-04-03 1 2 2013-04-24 1 3 2023-09-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Similar naphthalene diimide compound bound to the same 21-mer human telomeric G-quadruplex. Same naphthalene diimide compound bound to a 22-mer human telomeric G-quadruplex. Similar naphthalene diimide compound bound to a 22-mer human telomeric G-quadruplex. Similar naphthalene diimide compound bound to a 22-mer human telomeric G-quadruplex. RCSB Y RCSB 2012-01-13 REL REL K POTASSIUM ION R8G 2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone HOH water DNA synthesized by standard phosphoramidite chemistry. 32630 Synthetic DNA sample 3SC8 PDB ENTRY 3SC8 PDB experimental model K 1 2 K K 101 A K 2 2 K K 102 A K 3 2 K K 103 A R8G 23 3 R8G R8G 104 A HOH 1 4 HOH HOH 201 A HOH 2 4 HOH HOH 202 A HOH 3 4 HOH HOH 203 A HOH 4 4 HOH HOH 204 A HOH 5 4 HOH HOH 205 A HOH 6 4 HOH HOH 206 A HOH 7 4 HOH HOH 207 A HOH 8 4 HOH HOH 208 A DG 1 n 1 DG 1 A DG 2 n 2 DG 2 A DG 3 n 3 DG 3 A DT 4 n 4 DT 4 A DT 5 n 5 DT 5 A DA 6 n 6 DA 6 A DG 7 n 7 DG 7 A DG 8 n 8 DG 8 A DG 9 n 9 DG 9 A DT 10 n 10 DT 10 A DT 11 n 11 DT 11 A DA 12 n 12 DA 12 A DG 13 n 13 DG 13 A DG 14 n 14 DG 14 A DG 15 n 15 DG 15 A DT 16 n 16 DT 16 A DT 17 n 17 DT 17 A DA 18 n 18 DA 18 A DG 19 n 19 DG 19 A DG 20 n 20 DG 20 A DG 21 n 21 DG 21 A author_and_software_defined_assembly PISA 1 monomeric A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 2 A O6 DG 2 1_555 72.9 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 7 A O6 DG 7 1_555 63.6 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 A DG 7 A O6 DG 7 1_555 94.3 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 8 A O6 DG 8 1_555 135.1 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 A DG 8 A O6 DG 8 1_555 80.7 A DG 7 A O6 DG 7 1_555 A K 102 C K K 1_555 A DG 8 A O6 DG 8 1_555 83.4 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 13 A O6 DG 13 1_555 95.6 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 A DG 13 A O6 DG 13 1_555 152.8 A DG 7 A O6 DG 7 1_555 A K 102 C K K 1_555 A DG 13 A O6 DG 13 1_555 58.7 A DG 8 A O6 DG 8 1_555 A K 102 C K K 1_555 A DG 13 A O6 DG 13 1_555 91.6 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 14 A O6 DG 14 1_555 155.6 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 A DG 14 A O6 DG 14 1_555 116.8 A DG 7 A O6 DG 7 1_555 A K 102 C K K 1_555 A DG 14 A O6 DG 14 1_555 133.1 A DG 8 A O6 DG 8 1_555 A K 102 C K K 1_555 A DG 14 A O6 DG 14 1_555 69.2 A DG 13 A O6 DG 13 1_555 A K 102 C K K 1_555 A DG 14 A O6 DG 14 1_555 83.9 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 19 A O6 DG 19 1_555 65.2 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 A DG 19 A O6 DG 19 1_555 127.6 A DG 7 A O6 DG 7 1_555 A K 102 C K K 1_555 A DG 19 A O6 DG 19 1_555 93.9 A DG 8 A O6 DG 8 1_555 A K 102 C K K 1_555 A DG 19 A O6 DG 19 1_555 151.7 A DG 13 A O6 DG 13 1_555 A K 102 C K K 1_555 A DG 19 A O6 DG 19 1_555 63.6 A DG 14 A O6 DG 14 1_555 A K 102 C K K 1_555 A DG 19 A O6 DG 19 1_555 93.3 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 89.3 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 70.8 A DG 7 A O6 DG 7 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 152.2 A DG 8 A O6 DG 8 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 115.6 A DG 13 A O6 DG 13 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 134.9 A DG 14 A O6 DG 14 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 74.5 A DG 19 A O6 DG 19 1_555 A K 102 C K K 1_555 A DG 20 A O6 DG 20 1_555 78.5 A DG 1 A O6 DG 1 1_555 A K 103 D K K 1_555 A DG 7 A O6 DG 7 1_555 63.1 A DG 1 A O6 DG 1 1_555 A K 103 D K K 1_555 A DG 13 A O6 DG 13 1_555 108.5 A DG 7 A O6 DG 7 1_555 A K 103 D K K 1_555 A DG 13 A O6 DG 13 1_555 71.5 A DG 1 A O6 DG 1 1_555 A K 103 D K K 1_555 A DG 19 A O6 DG 19 1_555 64.0 A DG 7 A O6 DG 7 1_555 A K 103 D K K 1_555 A DG 19 A O6 DG 19 1_555 101.7 A DG 13 A O6 DG 13 1_555 A K 103 D K K 1_555 A DG 19 A O6 DG 19 1_555 75.6 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 3 A O6 DG 3 1_555 66.5 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 8 A O6 DG 8 1_555 69.1 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 A DG 8 A O6 DG 8 1_555 90.1 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 9 A O6 DG 9 1_555 123.4 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 A DG 9 A O6 DG 9 1_555 80.6 A DG 8 A O6 DG 8 1_555 A K 101 B K K 1_555 A DG 9 A O6 DG 9 1_555 66.3 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 14 A O6 DG 14 1_555 99.6 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 A DG 14 A O6 DG 14 1_555 148.3 A DG 8 A O6 DG 8 1_555 A K 101 B K K 1_555 A DG 14 A O6 DG 14 1_555 58.2 A DG 9 A O6 DG 9 1_555 A K 101 B K K 1_555 A DG 14 A O6 DG 14 1_555 85.0 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 15 A O6 DG 15 1_555 154.8 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 A DG 15 A O6 DG 15 1_555 137.7 A DG 8 A O6 DG 8 1_555 A K 101 B K K 1_555 A DG 15 A O6 DG 15 1_555 110.6 A DG 9 A O6 DG 9 1_555 A K 101 B K K 1_555 A DG 15 A O6 DG 15 1_555 75.4 A DG 14 A O6 DG 14 1_555 A K 101 B K K 1_555 A DG 15 A O6 DG 15 1_555 63.0 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 20 A O6 DG 20 1_555 65.4 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 A DG 20 A O6 DG 20 1_555 124.4 A DG 8 A O6 DG 8 1_555 A K 101 B K K 1_555 A DG 20 A O6 DG 20 1_555 97.4 A DG 9 A O6 DG 9 1_555 A K 101 B K K 1_555 A DG 20 A O6 DG 20 1_555 151.6 A DG 14 A O6 DG 14 1_555 A K 101 B K K 1_555 A DG 20 A O6 DG 20 1_555 66.6 A DG 15 A O6 DG 15 1_555 A K 101 B K K 1_555 A DG 20 A O6 DG 20 1_555 90.1 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 91.6 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 83.2 A DG 8 A O6 DG 8 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 160.6 A DG 9 A O6 DG 9 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 129.8 A DG 14 A O6 DG 14 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 126.9 A DG 15 A O6 DG 15 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 86.1 A DG 20 A O6 DG 20 1_555 A K 101 B K K 1_555 A DG 21 A O6 DG 21 1_555 71.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A K 103 D K 1 8.99 1.20 119.70 128.69 A A A C3' O3' P DT DT DT 10 10 11 Y 51.950 -0.02 -0.01 0.00 -0.02 0.00 0.03 0.945 0.913 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.27531 0.21172 0.21555 2.754 22.69 123 1995 1995 5.8 99.02 15.368 0.294 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.395 0.80 0.80 1.20 PDB ENTRY 3SC8 MAXIMUM LIKELIHOOD MASK 2.754 22.69 8 517 65 444 0 0.007 0.012 569 1.588 1.512 873 0.061 0.200 63 0.008 0.020 261 0.419 0.465 2.825 3 132 20 100.00 91.91 2.69 25.86 4DAQ 2284 2284 2 2 0.047 1 24.8 7.3 99.2 0.613 2.69 2.76 2.9 168 1 7.7 100 data collection DNA phasing PHASER refinement REFMAC 5.6.0117 data reduction xia2 data scaling SCALA Crystal structure of an intramolecular human telomeric DNA G-quadruplex 21-mer bound by the naphthalene diimide compound BMSG-SH-3 1 N N 2 N N 2 N N 2 N N 3 N N 4 N N metalc 2.675 A DG 1 A O6 DG 1 1_555 A K 102 C K K 1_555 metalc 2.897 A DG 1 A O6 DG 1 1_555 A K 103 D K K 1_555 metalc 2.818 A DG 2 A O6 DG 2 1_555 A K 101 B K K 1_555 metalc 2.594 A DG 2 A O6 DG 2 1_555 A K 102 C K K 1_555 metalc 2.674 A DG 3 A O6 DG 3 1_555 A K 101 B K K 1_555 metalc 2.804 A DG 7 A O6 DG 7 1_555 A K 102 C K K 1_555 metalc 2.598 A DG 7 A O6 DG 7 1_555 A K 103 D K K 1_555 metalc 2.993 A DG 8 A O6 DG 8 1_555 A K 101 B K K 1_555 metalc 2.497 A DG 8 A O6 DG 8 1_555 A K 102 C K K 1_555 metalc 2.753 A DG 9 A O6 DG 9 1_555 A K 101 B K K 1_555 metalc 3.333 A DG 13 A O6 DG 13 1_555 A K 102 C K K 1_555 metalc 2.612 A DG 13 A O6 DG 13 1_555 A K 103 D K K 1_555 metalc 3.053 A DG 14 A O6 DG 14 1_555 A K 101 B K K 1_555 metalc 2.674 A DG 14 A O6 DG 14 1_555 A K 102 C K K 1_555 metalc 2.776 A DG 15 A O6 DG 15 1_555 A K 101 B K K 1_555 metalc 2.899 A DG 19 A O6 DG 19 1_555 A K 102 C K K 1_555 metalc 2.775 A DG 19 A O6 DG 19 1_555 A K 103 D K K 1_555 metalc 2.804 A DG 20 A O6 DG 20 1_555 A K 101 B K K 1_555 metalc 2.651 A DG 20 A O6 DG 20 1_555 A K 102 C K K 1_555 metalc 2.615 A DG 21 A O6 DG 21 1_555 A K 101 B K K 1_555 hydrog TYPE_6_PAIR A DG 1 A N1 DG 1 1_555 A DG 7 A O6 DG 7 1_555 hydrog TYPE_6_PAIR A DG 1 A N2 DG 1 1_555 A DG 7 A N7 DG 7 1_555 hydrog TYPE_6_PAIR A DG 1 A N7 DG 1 1_555 A DG 19 A N2 DG 19 1_555 hydrog TYPE_6_PAIR A DG 1 A O6 DG 1 1_555 A DG 19 A N1 DG 19 1_555 hydrog TYPE_6_PAIR A DG 2 A N1 DG 2 1_555 A DG 8 A O6 DG 8 1_555 hydrog TYPE_6_PAIR A DG 2 A N2 DG 2 1_555 A DG 8 A N7 DG 8 1_555 hydrog TYPE_6_PAIR A DG 2 A N7 DG 2 1_555 A DG 20 A N2 DG 20 1_555 hydrog TYPE_6_PAIR A DG 2 A O6 DG 2 1_555 A DG 20 A N1 DG 20 1_555 hydrog TYPE_6_PAIR A DG 3 A N1 DG 3 1_555 A DG 9 A O6 DG 9 1_555 hydrog TYPE_6_PAIR A DG 3 A N2 DG 3 1_555 A DG 9 A N7 DG 9 1_555 hydrog TYPE_6_PAIR A DG 3 A N7 DG 3 1_555 A DG 21 A N2 DG 21 1_555 hydrog TYPE_6_PAIR A DG 3 A O6 DG 3 1_555 A DG 21 A N1 DG 21 1_555 hydrog TYPE_6_PAIR A DG 7 A N1 DG 7 1_555 A DG 13 A O6 DG 13 1_555 hydrog TYPE_6_PAIR A DG 7 A N2 DG 7 1_555 A DG 13 A N7 DG 13 1_555 hydrog TYPE_6_PAIR A DG 8 A N1 DG 8 1_555 A DG 14 A O6 DG 14 1_555 hydrog TYPE_6_PAIR A DG 8 A N2 DG 8 1_555 A DG 14 A N7 DG 14 1_555 hydrog TYPE_6_PAIR A DG 9 A N1 DG 9 1_555 A DG 15 A O6 DG 15 1_555 hydrog TYPE_6_PAIR A DG 9 A N2 DG 9 1_555 A DG 15 A N7 DG 15 1_555 hydrog TYPE_6_PAIR A DG 13 A N1 DG 13 1_555 A DG 19 A O6 DG 19 1_555 hydrog TYPE_6_PAIR A DG 13 A N2 DG 13 1_555 A DG 19 A N7 DG 19 1_555 hydrog TYPE_6_PAIR A DG 14 A N1 DG 14 1_555 A DG 20 A O6 DG 20 1_555 hydrog TYPE_6_PAIR A DG 14 A N2 DG 14 1_555 A DG 20 A N7 DG 20 1_555 hydrog TYPE_6_PAIR A DG 15 A N1 DG 15 1_555 A DG 21 A O6 DG 21 1_555 hydrog TYPE_6_PAIR A DG 15 A N2 DG 15 1_555 A DG 21 A N7 DG 21 1_555 DNA intramolecular, ligand-complex, G-quadruplex, DNA 4DAQ PDB 1 1 4DAQ GGGTTAGGGTTAGGGTTAGGG 1 21 4DAQ 1 21 4DAQ A 1 1 21 BINDING SITE FOR RESIDUE K A 101 A K 101 Software 9 BINDING SITE FOR RESIDUE K A 102 A K 102 Software 11 BINDING SITE FOR RESIDUE K A 103 A K 103 Software 10 BINDING SITE FOR RESIDUE R8G A 104 A R8G 104 Software 9 A DG 2 A DG 2 9 1_555 A DG 3 A DG 3 9 1_555 A DG 8 A DG 8 9 1_555 A DG 9 A DG 9 9 1_555 A DG 14 A DG 14 9 1_555 A DG 15 A DG 15 9 1_555 A DG 20 A DG 20 9 1_555 A DG 21 A DG 21 9 1_555 A K 102 C K 9 1_555 A DG 1 A DG 1 11 1_555 A DG 2 A DG 2 11 1_555 A DG 7 A DG 7 11 1_555 A DG 8 A DG 8 11 1_555 A DG 13 A DG 13 11 1_555 A DG 14 A DG 14 11 1_555 A DG 19 A DG 19 11 1_555 A DG 20 A DG 20 11 1_555 A K 101 B K 11 1_555 A K 103 D K 11 4_555 A K 103 D K 11 1_555 A DG 1 A DG 1 10 4_555 A DG 1 A DG 1 10 1_555 A DG 7 A DG 7 10 1_555 A DG 7 A DG 7 10 4_555 A DG 13 A DG 13 10 1_555 A DG 13 A DG 13 10 4_555 A DG 19 A DG 19 10 4_555 A DG 19 A DG 19 10 1_555 A K 102 C K 10 1_555 A K 102 C K 10 4_555 A DG 3 A DG 3 9 1_555 A DT 4 A DT 4 9 1_555 A DT 5 A DT 5 9 2_655 A DG 9 A DG 9 9 1_555 A DT 10 A DT 10 9 1_555 A DT 11 A DT 11 9 6_655 A DA 12 A DA 12 9 6_655 A DG 15 A DG 15 9 1_555 A DG 21 A DG 21 9 1_555 152 P 31 2 1