0.024773 0.000000 0.000000 0.000000 0.015428 0.000000 0.000000 0.000000 0.013654 0.00000 0.00000 0.00000 Fedorov, A.A. Fedorov, E.V. Desai, B. Gerlt, J.A. Almo, S.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 40.367 64.819 73.237 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N S N 305 N O N 306 N O N 307 N O N 308 N O N 309 N N N 310 S C N 311 N C N 312 N O N 313 R C N 314 N O N 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N N Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N O N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N C N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N sing N 328 N sing Y 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing To be Published 0353 Crystal structure of orotidine 5'-monophosphate decarboxylase from Sulfolobus solfataricus 10.2210/pdb4dbd/pdb pdb_00004dbd 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2010-11-05 ADSC QUANTUM 315r MIRRORS SINGLE WAVELENGTH M x-ray 1 1.075 1.0 X29A NSLS 1.075 SYNCHROTRON NSLS BEAMLINE X29A 24733.945 Orotidine 5'-phosphate decarboxylase 4.1.1.23 1 man polymer 96.063 SULFATE ION 3 syn non-polymer 18.015 water 82 nat water OMP decarboxylase no no MLKSRVILAMDKPLSYQVLKEMENELYGIKVGLPLVLDLGVDKTRELLIGLDVEEIIVDFKLADIGYIMKSIVERLSFAN SFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGGTKLDHITQYRRDFEKMT IVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDKVMKCKGAIFRKK MLKSRVILAMDKPLSYQVLKEMENELYGIKVGLPLVLDLGVDKTRELLIGLDVEEIIVDFKLADIGYIMKSIVERLSFAN SFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGGTKLDHITQYRRDFEKMT IVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDKVMKCKGAIFRKK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 98/2 sample pyrF, Ssol_1680 555311 Sulfolobus solfataricus 562 Escherichia coli 1 1.94 36.50 VAPOR DIFFUSION, HANGING DROP 5.6 1.0M lithium sulfate, 0.1M sodium citrate, 0.5M ammonium sulfate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K 293.0 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2013-02-13 1 1 2023-09-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-01-14 REL REL SO4 SULFATE ION HOH water 3VE9 PDB experimental model SO4 1 2 SO4 SO4 301 A SO4 2 2 SO4 SO4 302 A SO4 1 2 SO4 SO4 303 A HOH 1 3 HOH HOH 401 A HOH 2 3 HOH HOH 402 A HOH 3 3 HOH HOH 403 A HOH 4 3 HOH HOH 404 A HOH 5 3 HOH HOH 405 A HOH 6 3 HOH HOH 406 A HOH 7 3 HOH HOH 407 A HOH 8 3 HOH HOH 408 A HOH 9 3 HOH HOH 409 A HOH 10 3 HOH HOH 410 A HOH 11 3 HOH HOH 411 A HOH 12 3 HOH HOH 412 A HOH 13 3 HOH HOH 413 A HOH 14 3 HOH HOH 414 A HOH 15 3 HOH HOH 415 A HOH 16 3 HOH HOH 416 A HOH 17 3 HOH HOH 417 A HOH 18 3 HOH HOH 418 A HOH 19 3 HOH HOH 419 A HOH 20 3 HOH HOH 420 A HOH 21 3 HOH HOH 421 A HOH 22 3 HOH HOH 422 A HOH 23 3 HOH HOH 423 A HOH 24 3 HOH HOH 424 A HOH 25 3 HOH HOH 425 A HOH 26 3 HOH HOH 426 A HOH 27 3 HOH HOH 427 A HOH 28 3 HOH HOH 428 A HOH 29 3 HOH HOH 429 A HOH 30 3 HOH HOH 430 A HOH 31 3 HOH HOH 431 A HOH 32 3 HOH HOH 432 A HOH 33 3 HOH HOH 433 A HOH 34 3 HOH HOH 434 A HOH 35 3 HOH HOH 435 A HOH 36 3 HOH HOH 436 A HOH 37 3 HOH HOH 437 A HOH 38 3 HOH HOH 438 A HOH 39 3 HOH HOH 439 A HOH 40 3 HOH HOH 440 A HOH 41 3 HOH HOH 441 A HOH 42 3 HOH HOH 442 A HOH 43 3 HOH HOH 443 A HOH 44 3 HOH HOH 444 A HOH 45 3 HOH HOH 445 A HOH 47 3 HOH HOH 446 A HOH 48 3 HOH HOH 447 A HOH 49 3 HOH HOH 448 A HOH 50 3 HOH HOH 449 A HOH 51 3 HOH HOH 450 A HOH 52 3 HOH HOH 451 A HOH 53 3 HOH HOH 452 A HOH 54 3 HOH HOH 453 A HOH 55 3 HOH HOH 454 A HOH 56 3 HOH HOH 455 A HOH 57 3 HOH HOH 456 A HOH 58 3 HOH HOH 457 A HOH 59 3 HOH HOH 458 A HOH 60 3 HOH HOH 459 A HOH 61 3 HOH HOH 460 A HOH 63 3 HOH HOH 461 A HOH 64 3 HOH HOH 462 A HOH 65 3 HOH HOH 463 A HOH 66 3 HOH HOH 464 A HOH 67 3 HOH HOH 465 A HOH 68 3 HOH HOH 466 A HOH 69 3 HOH HOH 467 A HOH 70 3 HOH HOH 468 A HOH 71 3 HOH HOH 469 A HOH 72 3 HOH HOH 470 A HOH 73 3 HOH HOH 471 A HOH 74 3 HOH HOH 472 A HOH 75 3 HOH HOH 473 A HOH 76 3 HOH HOH 474 A HOH 77 3 HOH HOH 475 A HOH 78 3 HOH HOH 476 A HOH 79 3 HOH HOH 477 A HOH 80 3 HOH HOH 478 A HOH 81 3 HOH HOH 479 A HOH 82 3 HOH HOH 480 A HOH 83 3 HOH HOH 481 A HOH 84 3 HOH HOH 482 A n 1 1 A n 2 2 A LYS 3 n 3 LYS 3 A SER 4 n 4 SER 4 A ARG 5 n 5 ARG 5 A VAL 6 n 6 VAL 6 A ILE 7 n 7 ILE 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A MET 10 n 10 MET 10 A ASP 11 n 11 ASP 11 A LYS 12 n 12 LYS 12 A PRO 13 n 13 PRO 13 A LEU 14 n 14 LEU 14 A SER 15 n 15 SER 15 A TYR 16 n 16 TYR 16 A GLN 17 n 17 GLN 17 A VAL 18 n 18 VAL 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A MET 22 n 22 MET 22 A GLU 23 n 23 GLU 23 A ASN 24 n 24 ASN 24 A GLU 25 n 25 GLU 25 A LEU 26 n 26 LEU 26 A TYR 27 n 27 TYR 27 A GLY 28 n 28 GLY 28 A ILE 29 n 29 ILE 29 A LYS 30 n 30 LYS 30 A VAL 31 n 31 VAL 31 A GLY 32 n 32 GLY 32 A LEU 33 n 33 LEU 33 A PRO 34 n 34 PRO 34 A LEU 35 n 35 LEU 35 A VAL 36 n 36 VAL 36 A LEU 37 n 37 LEU 37 A ASP 38 n 38 ASP 38 A LEU 39 n 39 LEU 39 A GLY 40 n 40 GLY 40 A VAL 41 n 41 VAL 41 A ASP 42 n 42 ASP 42 A LYS 43 n 43 LYS 43 A THR 44 n 44 THR 44 A ARG 45 n 45 ARG 45 A GLU 46 n 46 GLU 46 A LEU 47 n 47 LEU 47 A LEU 48 n 48 LEU 48 A ILE 49 n 49 ILE 49 A GLY 50 n 50 GLY 50 A LEU 51 n 51 LEU 51 A ASP 52 n 52 ASP 52 A VAL 53 n 53 VAL 53 A GLU 54 n 54 GLU 54 A GLU 55 n 55 GLU 55 A ILE 56 n 56 ILE 56 A ILE 57 n 57 ILE 57 A VAL 58 n 58 VAL 58 A ASP 59 n 59 ASP 59 A PHE 60 n 60 PHE 60 A LYS 61 n 61 LYS 61 A LEU 62 n 62 LEU 62 A ALA 63 n 63 ALA 63 A ASP 64 n 64 ASP 64 A ILE 65 n 65 ILE 65 A GLY 66 n 66 GLY 66 A TYR 67 n 67 TYR 67 A ILE 68 n 68 ILE 68 A MET 69 n 69 MET 69 A LYS 70 n 70 LYS 70 A SER 71 n 71 SER 71 A ILE 72 n 72 ILE 72 A VAL 73 n 73 VAL 73 A GLU 74 n 74 GLU 74 A ARG 75 n 75 ARG 75 A LEU 76 n 76 LEU 76 A SER 77 n 77 SER 77 A PHE 78 n 78 PHE 78 A ALA 79 n 79 ALA 79 A ASN 80 n 80 ASN 80 A SER 81 n 81 SER 81 A PHE 82 n 82 PHE 82 A ILE 83 n 83 ILE 83 A ALA 84 n 84 ALA 84 A HIS 85 n 85 HIS 85 A SER 86 n 86 SER 86 A PHE 87 n 87 PHE 87 A ILE 88 n 88 ILE 88 A GLY 89 n 89 GLY 89 A VAL 90 n 90 VAL 90 A LYS 91 n 91 LYS 91 A GLY 92 n 92 GLY 92 A SER 93 n 93 SER 93 A LEU 94 n 94 LEU 94 A ASP 95 n 95 ASP 95 A GLU 96 n 96 GLU 96 A LEU 97 n 97 LEU 97 A LYS 98 n 98 LYS 98 A ARG 99 n 99 ARG 99 A TYR 100 n 100 TYR 100 A LEU 101 n 101 LEU 101 A ASP 102 n 102 ASP 102 A ALA 103 n 103 ALA 103 A ASN 104 n 104 ASN 104 A SER 105 n 105 SER 105 A LYS 106 n 106 LYS 106 A ASN 107 n 107 ASN 107 A LEU 108 n 108 LEU 108 A TYR 109 n 109 TYR 109 A LEU 110 n 110 LEU 110 A VAL 111 n 111 VAL 111 A ALA 112 n 112 ALA 112 A VAL 113 n 113 VAL 113 A MET 114 n 114 MET 114 A SER 115 n 115 SER 115 A HIS 116 n 116 HIS 116 A GLU 117 n 117 GLU 117 A GLY 118 n 118 GLY 118 A TRP 119 n 119 TRP 119 A SER 120 n 120 SER 120 A THR 121 n 121 THR 121 A LEU 122 n 122 LEU 122 A PHE 123 n 123 PHE 123 A ALA 124 n 124 ALA 124 A ASP 125 n 125 ASP 125 A TYR 126 n 126 TYR 126 A ILE 127 n 127 ILE 127 A LYS 128 n 128 LYS 128 A ASN 129 n 129 ASN 129 A VAL 130 n 130 VAL 130 A ILE 131 n 131 ILE 131 A ARG 132 n 132 ARG 132 A GLU 133 n 133 GLU 133 A ILE 134 n 134 ILE 134 A SER 135 n 135 SER 135 A PRO 136 n 136 PRO 136 A LYS 137 n 137 LYS 137 A GLY 138 n 138 GLY 138 A ILE 139 n 139 ILE 139 A VAL 140 n 140 VAL 140 A VAL 141 n 141 VAL 141 A GLY 142 n 142 GLY 142 A GLY 143 n 143 GLY 143 A THR 144 n 144 THR 144 A LYS 145 n 145 LYS 145 A LEU 146 n 146 LEU 146 A ASP 147 n 147 ASP 147 A HIS 148 n 148 HIS 148 A ILE 149 n 149 ILE 149 A THR 150 n 150 THR 150 A GLN 151 n 151 GLN 151 A TYR 152 n 152 TYR 152 A ARG 153 n 153 ARG 153 A ARG 154 n 154 ARG 154 A ASP 155 n 155 ASP 155 A PHE 156 n 156 PHE 156 A GLU 157 n 157 GLU 157 A LYS 158 n 158 LYS 158 A MET 159 n 159 MET 159 A THR 160 n 160 THR 160 A ILE 161 n 161 ILE 161 A VAL 162 n 162 VAL 162 A SER 163 n 163 SER 163 A PRO 164 n 164 PRO 164 A GLY 165 n 165 GLY 165 A MET 166 n 166 MET 166 A GLY 167 n 167 GLY 167 A SER 168 n 168 SER 168 A GLN 169 n 169 GLN 169 A GLY 170 n 170 GLY 170 A GLY 171 n 171 GLY 171 A SER 172 n 172 SER 172 A TYR 173 n 173 TYR 173 A GLY 174 n 174 GLY 174 A ASP 175 n 175 ASP 175 A ALA 176 n 176 ALA 176 A VAL 177 n 177 VAL 177 A CYS 178 n 178 CYS 178 A ALA 179 n 179 ALA 179 A GLY 180 n 180 GLY 180 A ALA 181 n 181 ALA 181 A ASP 182 n 182 ASP 182 A TYR 183 n 183 TYR 183 A GLU 184 n 184 GLU 184 A ILE 185 n 185 ILE 185 A ILE 186 n 186 ILE 186 A GLY 187 n 187 GLY 187 A ARG 188 n 188 ARG 188 A SER 189 n 189 SER 189 A ILE 190 n 190 ILE 190 A TYR 191 n 191 TYR 191 A ASN 192 n 192 ASN 192 A ALA 193 n 193 ALA 193 A GLY 194 n 194 GLY 194 A ASN 195 n 195 ASN 195 A PRO 196 n 196 PRO 196 A LEU 197 n 197 LEU 197 A THR 198 n 198 THR 198 A ALA 199 n 199 ALA 199 A LEU 200 n 200 LEU 200 A ARG 201 n 201 ARG 201 A THR 202 n 202 THR 202 A ILE 203 n 203 ILE 203 A ASN 204 n 204 ASN 204 A LYS 205 n 205 LYS 205 A ILE 206 n 206 ILE 206 A ILE 207 n 207 ILE 207 A GLU 208 n 208 GLU 208 A ASP 209 n 209 ASP 209 A LYS 210 n 210 LYS 210 A VAL 211 n 211 VAL 211 A MET 212 n 212 MET 212 A n 213 213 A n 214 214 A n 215 215 A n 216 216 A n 217 217 A n 218 218 A n 219 219 A n 220 220 A n 221 221 A n 222 222 A author_and_software_defined_assembly PISA 2 dimeric 4780 -129 15860 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 8 A N LEU 8 A O LYS 30 A O LYS 30 A N VAL 31 A N VAL 31 A O ILE 57 A O ILE 57 A N LEU 62 A N LEU 62 A O HIS 85 A O HIS 85 A N PHE 82 A N PHE 82 A O TYR 109 A O TYR 109 A N ALA 112 A N ALA 112 A O VAL 140 A O VAL 140 A N VAL 141 A N VAL 141 A O VAL 162 A O VAL 162 A N SER 163 A N SER 163 A O ILE 185 A O ILE 185 A O GLU 184 A O GLU 184 A N ILE 7 A N ILE 7 1 A SO4 303 D SO4 1 A MET 1 A MET 1 1 Y 1 A LEU 2 A LEU 2 1 Y 1 A LYS 213 A LYS 213 1 Y 1 A CYS 214 A CYS 214 1 Y 1 A LYS 215 A LYS 215 1 Y 1 A GLY 216 A GLY 216 1 Y 1 A ALA 217 A ALA 217 1 Y 1 A ILE 218 A ILE 218 1 Y 1 A PHE 219 A PHE 219 1 Y 1 A ARG 220 A ARG 220 1 Y 1 A LYS 221 A LYS 221 1 Y 1 A LYS 222 A LYS 222 1 Y 1 A ALA 63 -156.98 62.42 1 A VAL 90 -97.73 -66.40 1 A SER 93 -138.56 -91.54 1 A LYS 145 -108.24 65.85 -4.7229 0.0000 -0.0000 10.7679 -0.0000 -6.0450 0.2450 0.2078 0.2097 0.2097 1.699 36.618 1107 21586 21586 5.13 98.82 0.43 RANDOM 1 0.0 MOLECULAR REPLACEMENT 25.41 1.17 1.40 3VE9 ML FLAT BULK SOLVENT MODEL 29.097 0.360 1.699 36.618 82 1733 15 0 1636 0.006 1705 0.992 2303 13.397 638 0.071 262 0.004 289 0.3604 0.3067 1.7767 122 2320 91.00 0.3045 0.2612 1.8703 128 2528 100.00 0.2773 0.2147 1.9875 157 2539 100.00 0.2459 0.2141 2.1410 132 2573 100.00 0.2784 0.2114 2.3564 141 2561 100.00 0.3078 0.2129 2.6973 154 2587 100.00 0.2116 0.2122 3.3979 135 2614 100.00 0.2007 0.1832 36.6270 138 2757 100.00 1.699 36.618 4DBD 21586 21586 0.0 0.0 1 98.82 data collection CBASS model building PHENIX refinement PHENIX (phenix.refine: 1.7.1_743) data reduction HKL-2000 data scaling HKL-2000 phasing PHENIX Crystal structure of orotidine 5'-monophosphate decarboxylase from Sulfolobus solfataricus 1 N N 2 N N 2 N N 2 N N 3 N N A SER 15 A SER 15 HELX_P A GLU 23 A GLU 23 1 1 9 A ASN 24 A ASN 24 HELX_P A LEU 26 A LEU 26 5 2 3 A LEU 33 A LEU 33 HELX_P A GLY 40 A GLY 40 1 3 8 A GLY 40 A GLY 40 HELX_P A ILE 49 A ILE 49 1 4 10 A ILE 65 A ILE 65 HELX_P A GLU 74 A GLU 74 1 5 10 A SER 93 A SER 93 HELX_P A ASN 104 A ASN 104 1 6 12 A PHE 123 A PHE 123 HELX_P A SER 135 A SER 135 1 7 13 A LYS 145 A LYS 145 HELX_P A PHE 156 A PHE 156 1 8 12 A GLY 174 A GLY 174 HELX_P A GLY 180 A GLY 180 1 9 7 A GLY 187 A GLY 187 HELX_P A ASN 192 A ASN 192 1 10 6 A ASN 195 A ASN 195 HELX_P A VAL 211 A VAL 211 1 11 17 LYASE TIM barrel, orotidine 5'-monophosphate decarboxylase, orotidine 5'-monophosphate, LYASE D0KT28_SULS9 UNP 1 1 D0KT28 MLKSRVILAMDKPLSYQVLKEMENELYGIKVGLPLVLDLGVDKTRELLIGLDVEEIIVDFKLADIGYIMKSIVERLSFAN SFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGGTKLDHITQYRRDFEKMT IVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIEDKVMKCKGAIFRKK 1 222 4DBD 1 222 D0KT28 A 1 1 222 9 parallel parallel parallel parallel parallel parallel parallel parallel A VAL 6 A VAL 6 A MET 10 A MET 10 A GLY 28 A GLY 28 A GLY 32 A GLY 32 A GLU 55 A GLU 55 A LEU 62 A LEU 62 A SER 81 A SER 81 A HIS 85 A HIS 85 A ASN 107 A ASN 107 A VAL 113 A VAL 113 A GLY 138 A GLY 138 A VAL 141 A VAL 141 A THR 160 A THR 160 A SER 163 A SER 163 A TYR 183 A TYR 183 A ILE 186 A ILE 186 A VAL 6 A VAL 6 A MET 10 A MET 10 BINDING SITE FOR RESIDUE SO4 A 301 A SO4 301 Software 7 BINDING SITE FOR RESIDUE SO4 A 302 A SO4 302 Software 2 BINDING SITE FOR RESIDUE SO4 A 303 A SO4 303 Software 6 A GLN 169 A GLN 169 7 1_555 A GLY 187 A GLY 187 7 1_555 A ARG 188 A ARG 188 7 1_555 A HOH 407 E HOH 7 1_555 A HOH 419 E HOH 7 1_555 A HOH 431 E HOH 7 1_555 A HOH 451 E HOH 7 1_555 A THR 121 A THR 121 2 1_555 A HIS 148 A HIS 148 2 1_555 A GLY 40 A GLY 40 6 2_555 A GLY 40 A GLY 40 6 1_555 A VAL 41 A VAL 41 6 1_555 A VAL 41 A VAL 41 6 2_555 A HOH 438 E HOH 6 2_555 A HOH 438 E HOH 6 1_555 18 P 21 21 2