0.012554 0.000000 0.001407 0.000000 0.014054 0.000000 0.000000 0.000000 0.018247 0.00000 0.00000 0.00000 Zhang, Z. Chamala, S. Evans, B. Foti, R. Gizzi, A. Hillerich, B. Kar, A. Lafleur, J. Seidel, R. Villigas, G. Zencheck, W. Almo, S.C. Swaminathan, S. New York Structural Genomics Research Consortium (NYSGRC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 96.39 90.00 79.657 71.155 55.148 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N O N 235 N C N 236 N C N 237 N SE N 238 N C N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing To be Published 0353 The crystals structure of dehydrogenase from Rhizobium meliloti 10.2210/pdb4dgs/pdb pdb_00004dgs 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2012-01-23 ADSC QUANTUM 315 Si 111 CHANNEL SINGLE WAVELENGTH M x-ray 1 0.9792 1.0 X29A NSLS 0.9792 SYNCHROTRON NSLS BEAMLINE X29A 36841.238 Dehydrogenase 1 man polymer 18.015 water 50 nat water no yes (MSE)HHHHHHSSGVDLGTENLYFQS(MSE)LEFRNVKPDLLLVEP(MSE)(MSE)PFV(MSE)DELQRNYSVHRLYQAA DRPALEAALPSIRAVATGGGAGLSNEW(MSE)EKLPSLGIIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIA L(MSE)LAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFG(MSE)SVRYWNRSTLSGV DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNE PAIRSEFHTTPNTVL(MSE)PHQGSATVETR(MSE)A(MSE)GKLVLANLAAHFAGEKAPNTVN MHHHHHHSSGVDLGTENLYFQSMLEFRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGG AGLSNEWMEKLPSLGIIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAG EQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIV DASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGK LVLANLAAHFAGEKAPNTVN A NYSGRC-011686 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Ensifer meliloti 1021 sample RA0043, SMa0085 266834 Sinorhizobium meliloti 511693 Escherichia coli BL21 plasmid pET 1 2.11 41.65 VAPOR DIFFUSION, SITTING DROP 6.5 0.2 M Calcium acetate, 0.1 M Sodium cacodylate trihydrate pH 6.5, 18% w/v PEG8000, VAPOR DIFFUSION, SITTING DROP, temperature 291K 291 New York Structural Genomics Research Consortium NYSGRC PSI:Biology chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq_dif chem_comp_atom chem_comp_bond repository Initial release Data collection Database references Derived calculations Refinement description Data collection 1 0 2012-02-08 1 1 2023-09-13 1 2 2023-12-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 Y RCSB Y RCSB 2012-01-26 REL REL HOH water 2DBQ pdb entry 2dbq PDB experimental model HOH 1 2 HOH HOH 401 A HOH 2 2 HOH HOH 402 A HOH 3 2 HOH HOH 403 A HOH 4 2 HOH HOH 404 A HOH 5 2 HOH HOH 405 A HOH 6 2 HOH HOH 406 A HOH 7 2 HOH HOH 407 A HOH 8 2 HOH HOH 408 A HOH 9 2 HOH HOH 409 A HOH 10 2 HOH HOH 410 A HOH 11 2 HOH HOH 411 A HOH 12 2 HOH HOH 412 A HOH 13 2 HOH HOH 413 A HOH 14 2 HOH HOH 414 A HOH 15 2 HOH HOH 415 A HOH 16 2 HOH HOH 416 A HOH 18 2 HOH HOH 417 A HOH 19 2 HOH HOH 418 A HOH 20 2 HOH HOH 419 A HOH 21 2 HOH HOH 420 A HOH 22 2 HOH HOH 421 A HOH 23 2 HOH HOH 422 A HOH 24 2 HOH HOH 423 A HOH 25 2 HOH HOH 424 A HOH 26 2 HOH HOH 425 A HOH 27 2 HOH HOH 426 A HOH 28 2 HOH HOH 427 A HOH 29 2 HOH HOH 428 A HOH 30 2 HOH HOH 429 A HOH 31 2 HOH HOH 430 A HOH 32 2 HOH HOH 431 A HOH 33 2 HOH HOH 432 A HOH 34 2 HOH HOH 433 A HOH 35 2 HOH HOH 434 A HOH 36 2 HOH HOH 435 A HOH 37 2 HOH HOH 436 A HOH 38 2 HOH HOH 437 A HOH 40 2 HOH HOH 438 A HOH 41 2 HOH HOH 439 A HOH 42 2 HOH HOH 440 A HOH 43 2 HOH HOH 441 A HOH 44 2 HOH HOH 442 A HOH 45 2 HOH HOH 443 A HOH 46 2 HOH HOH 444 A HOH 47 2 HOH HOH 445 A HOH 49 2 HOH HOH 446 A HOH 50 2 HOH HOH 447 A HOH 52 2 HOH HOH 448 A HOH 53 2 HOH HOH 449 A HOH 55 2 HOH HOH 450 A n 1 -22 A n 2 -21 A n 3 -20 A n 4 -19 A n 5 -18 A n 6 -17 A n 7 -16 A n 8 -15 A n 9 -14 A n 10 -13 A n 11 -12 A n 12 -11 A n 13 -10 A n 14 -9 A n 15 -8 A n 16 -7 A n 17 -6 A n 18 -5 A n 19 -4 A n 20 -3 A n 21 -2 A n 22 -1 A n 23 0 A n 24 1 A n 25 2 A n 26 3 A n 27 4 A n 28 5 A n 29 6 A n 30 7 A n 31 8 A n 32 9 A LEU 10 n 33 LEU 10 A LEU 11 n 34 LEU 11 A LEU 12 n 35 LEU 12 A VAL 13 n 36 VAL 13 A GLU 14 n 37 GLU 14 A PRO 15 n 38 PRO 15 A MSE 16 n 39 MSE 16 A MSE 17 n 40 MSE 17 A PRO 18 n 41 PRO 18 A PHE 19 n 42 PHE 19 A VAL 20 n 43 VAL 20 A MSE 21 n 44 MSE 21 A ASP 22 n 45 ASP 22 A GLU 23 n 46 GLU 23 A LEU 24 n 47 LEU 24 A GLN 25 n 48 GLN 25 A ARG 26 n 49 ARG 26 A ASN 27 n 50 ASN 27 A TYR 28 n 51 TYR 28 A SER 29 n 52 SER 29 A VAL 30 n 53 VAL 30 A HIS 31 n 54 HIS 31 A ARG 32 n 55 ARG 32 A LEU 33 n 56 LEU 33 A TYR 34 n 57 TYR 34 A GLN 35 n 58 GLN 35 A ALA 36 n 59 ALA 36 A ALA 37 n 60 ALA 37 A ASP 38 n 61 ASP 38 A ARG 39 n 62 ARG 39 A PRO 40 n 63 PRO 40 A ALA 41 n 64 ALA 41 A LEU 42 n 65 LEU 42 A GLU 43 n 66 GLU 43 A ALA 44 n 67 ALA 44 A ALA 45 n 68 ALA 45 A LEU 46 n 69 LEU 46 A PRO 47 n 70 PRO 47 A SER 48 n 71 SER 48 A ILE 49 n 72 ILE 49 A ARG 50 n 73 ARG 50 A ALA 51 n 74 ALA 51 A VAL 52 n 75 VAL 52 A ALA 53 n 76 ALA 53 A THR 54 n 77 THR 54 A GLY 55 n 78 GLY 55 A GLY 56 n 79 GLY 56 A GLY 57 n 80 GLY 57 A ALA 58 n 81 ALA 58 A GLY 59 n 82 GLY 59 A LEU 60 n 83 LEU 60 A SER 61 n 84 SER 61 A ASN 62 n 85 ASN 62 A GLU 63 n 86 GLU 63 A TRP 64 n 87 TRP 64 A MSE 65 n 88 MSE 65 A GLU 66 n 89 GLU 66 A LYS 67 n 90 LYS 67 A LEU 68 n 91 LEU 68 A PRO 69 n 92 PRO 69 A SER 70 n 93 SER 70 A LEU 71 n 94 LEU 71 A GLY 72 n 95 GLY 72 A ILE 73 n 96 ILE 73 A ILE 74 n 97 ILE 74 A ALA 75 n 98 ALA 75 A ILE 76 n 99 ILE 76 A ASN 77 n 100 ASN 77 A GLY 78 n 101 GLY 78 A VAL 79 n 102 VAL 79 A GLY 80 n 103 GLY 80 A THR 81 n 104 THR 81 A ASP 82 n 105 ASP 82 A LYS 83 n 106 LYS 83 A VAL 84 n 107 VAL 84 A ASP 85 n 108 ASP 85 A LEU 86 n 109 LEU 86 A ALA 87 n 110 ALA 87 A ARG 88 n 111 ARG 88 A ALA 89 n 112 ALA 89 A ARG 90 n 113 ARG 90 A ARG 91 n 114 ARG 91 A ARG 92 n 115 ARG 92 A ASN 93 n 116 ASN 93 A ILE 94 n 117 ILE 94 A ASP 95 n 118 ASP 95 A VAL 96 n 119 VAL 96 A THR 97 n 120 THR 97 A THR 98 n 121 THR 98 A THR 99 n 122 THR 99 A PRO 100 n 123 PRO 100 A GLY 101 n 124 GLY 101 A VAL 102 n 125 VAL 102 A LEU 103 n 126 LEU 103 A ALA 104 n 127 ALA 104 A ASP 105 n 128 ASP 105 A ASP 106 n 129 ASP 106 A VAL 107 n 130 VAL 107 A ALA 108 n 131 ALA 108 A ASP 109 n 132 ASP 109 A LEU 110 n 133 LEU 110 A GLY 111 n 134 GLY 111 A ILE 112 n 135 ILE 112 A ALA 113 n 136 ALA 113 A LEU 114 n 137 LEU 114 A MSE 115 n 138 MSE 115 A LEU 116 n 139 LEU 116 A ALA 117 n 140 ALA 117 A VAL 118 n 141 VAL 118 A LEU 119 n 142 LEU 119 A ARG 120 n 143 ARG 120 A ARG 121 n 144 ARG 121 A VAL 122 n 145 VAL 122 A GLY 123 n 146 GLY 123 A ASP 124 n 147 ASP 124 A GLY 125 n 148 GLY 125 A ASP 126 n 149 ASP 126 A ARG 127 n 150 ARG 127 A LEU 128 n 151 LEU 128 A VAL 129 n 152 VAL 129 A ARG 130 n 153 ARG 130 A GLU 131 n 154 GLU 131 A GLY 132 n 155 GLY 132 A ARG 133 n 156 ARG 133 A TRP 134 n 157 TRP 134 A n 158 135 A n 159 136 A n 160 137 A n 161 138 A n 162 139 A n 163 140 A PRO 141 n 164 PRO 141 A LEU 142 n 165 LEU 142 A GLY 143 n 166 GLY 143 A HIS 144 n 167 HIS 144 A SER 145 n 168 SER 145 A PRO 146 n 169 PRO 146 A LYS 147 n 170 LYS 147 A GLY 148 n 171 GLY 148 A LYS 149 n 172 LYS 149 A ARG 150 n 173 ARG 150 A ILE 151 n 174 ILE 151 A GLY 152 n 175 GLY 152 A VAL 153 n 176 VAL 153 A LEU 154 n 177 LEU 154 A GLY 155 n 178 GLY 155 A LEU 156 n 179 LEU 156 A GLY 157 n 180 GLY 157 A GLN 158 n 181 GLN 158 A ILE 159 n 182 ILE 159 A GLY 160 n 183 GLY 160 A ARG 161 n 184 ARG 161 A ALA 162 n 185 ALA 162 A LEU 163 n 186 LEU 163 A ALA 164 n 187 ALA 164 A SER 165 n 188 SER 165 A ARG 166 n 189 ARG 166 A ALA 167 n 190 ALA 167 A GLU 168 n 191 GLU 168 A ALA 169 n 192 ALA 169 A PHE 170 n 193 PHE 170 A GLY 171 n 194 GLY 171 A MSE 172 n 195 MSE 172 A SER 173 n 196 SER 173 A VAL 174 n 197 VAL 174 A ARG 175 n 198 ARG 175 A TYR 176 n 199 TYR 176 A TRP 177 n 200 TRP 177 A ASN 178 n 201 ASN 178 A ARG 179 n 202 ARG 179 A SER 180 n 203 SER 180 A THR 181 n 204 THR 181 A LEU 182 n 205 LEU 182 A SER 183 n 206 SER 183 A GLY 184 n 207 GLY 184 A VAL 185 n 208 VAL 185 A ASP 186 n 209 ASP 186 A TRP 187 n 210 TRP 187 A ILE 188 n 211 ILE 188 A ALA 189 n 212 ALA 189 A HIS 190 n 213 HIS 190 A GLN 191 n 214 GLN 191 A SER 192 n 215 SER 192 A PRO 193 n 216 PRO 193 A VAL 194 n 217 VAL 194 A ASP 195 n 218 ASP 195 A LEU 196 n 219 LEU 196 A ALA 197 n 220 ALA 197 A ARG 198 n 221 ARG 198 A ASP 199 n 222 ASP 199 A SER 200 n 223 SER 200 A ASP 201 n 224 ASP 201 A VAL 202 n 225 VAL 202 A LEU 203 n 226 LEU 203 A ALA 204 n 227 ALA 204 A VAL 205 n 228 VAL 205 A CYS 206 n 229 CYS 206 A VAL 207 n 230 VAL 207 A n 231 208 A n 232 209 A n 233 210 A n 234 211 A n 235 212 A n 236 213 A n 237 214 A n 238 215 A n 239 216 A n 240 217 A ASP 218 n 241 ASP 218 A ALA 219 n 242 ALA 219 A SER 220 n 243 SER 220 A LEU 221 n 244 LEU 221 A LEU 222 n 245 LEU 222 A GLN 223 n 246 GLN 223 A ALA 224 n 247 ALA 224 A LEU 225 n 248 LEU 225 A GLY 226 n 249 GLY 226 A PRO 227 n 250 PRO 227 A GLU 228 n 251 GLU 228 A GLY 229 n 252 GLY 229 A ILE 230 n 253 ILE 230 A VAL 231 n 254 VAL 231 A VAL 232 n 255 VAL 232 A ASN 233 n 256 ASN 233 A VAL 234 n 257 VAL 234 A ALA 235 n 258 ALA 235 A ARG 236 n 259 ARG 236 A GLY 237 n 260 GLY 237 A n 261 238 A n 262 239 A n 263 240 A n 264 241 A n 265 242 A n 266 243 A n 267 244 A n 268 245 A n 269 246 A n 270 247 A n 271 248 A n 272 249 A n 273 250 A n 274 251 A GLY 252 n 275 GLY 252 A THR 253 n 276 THR 253 A ILE 254 n 277 ILE 254 A ALA 255 n 278 ALA 255 A GLY 256 n 279 GLY 256 A ALA 257 n 280 ALA 257 A GLY 258 n 281 GLY 258 A LEU 259 n 282 LEU 259 A ASP 260 n 283 ASP 260 A VAL 261 n 284 VAL 261 A PHE 262 n 285 PHE 262 A VAL 263 n 286 VAL 263 A ASN 264 n 287 ASN 264 A GLU 265 n 288 GLU 265 A PRO 266 n 289 PRO 266 A ALA 267 n 290 ALA 267 A ILE 268 n 291 ILE 268 A ARG 269 n 292 ARG 269 A SER 270 n 293 SER 270 A GLU 271 n 294 GLU 271 A PHE 272 n 295 PHE 272 A HIS 273 n 296 HIS 273 A THR 274 n 297 THR 274 A THR 275 n 298 THR 275 A PRO 276 n 299 PRO 276 A ASN 277 n 300 ASN 277 A THR 278 n 301 THR 278 A VAL 279 n 302 VAL 279 A LEU 280 n 303 LEU 280 A MSE 281 n 304 MSE 281 A PRO 282 n 305 PRO 282 A HIS 283 n 306 HIS 283 A GLN 284 n 307 GLN 284 A GLY 285 n 308 GLY 285 A SER 286 n 309 SER 286 A ALA 287 n 310 ALA 287 A THR 288 n 311 THR 288 A VAL 289 n 312 VAL 289 A GLU 290 n 313 GLU 290 A THR 291 n 314 THR 291 A ARG 292 n 315 ARG 292 A MSE 293 n 316 MSE 293 A ALA 294 n 317 ALA 294 A MSE 295 n 318 MSE 295 A GLY 296 n 319 GLY 296 A LYS 297 n 320 LYS 297 A LEU 298 n 321 LEU 298 A VAL 299 n 322 VAL 299 A LEU 300 n 323 LEU 300 A ALA 301 n 324 ALA 301 A ASN 302 n 325 ASN 302 A LEU 303 n 326 LEU 303 A ALA 304 n 327 ALA 304 A ALA 305 n 328 ALA 305 A HIS 306 n 329 HIS 306 A PHE 307 n 330 PHE 307 A ALA 308 n 331 ALA 308 A GLY 309 n 332 GLY 309 A GLU 310 n 333 GLU 310 A LYS 311 n 334 LYS 311 A ALA 312 n 335 ALA 312 A PRO 313 n 336 PRO 313 A ASN 314 n 337 ASN 314 A THR 315 n 338 THR 315 A VAL 316 n 339 VAL 316 A n 340 317 A software_defined_assembly PISA 2 dimeric 4460 -18 24610 A MSE 16 SELENOMETHIONINE A MSE 39 MET A MSE 17 SELENOMETHIONINE A MSE 40 MET A MSE 21 SELENOMETHIONINE A MSE 44 MET A MSE 65 SELENOMETHIONINE A MSE 88 MET A MSE 115 SELENOMETHIONINE A MSE 138 MET A MSE 172 SELENOMETHIONINE A MSE 195 MET A MSE 281 SELENOMETHIONINE A MSE 304 MET A MSE 293 SELENOMETHIONINE A MSE 316 MET A MSE 295 SELENOMETHIONINE A MSE 318 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_554 -x,y,-z-1 crystal symmetry operation 6.1377234226 0.0000000000 -54.8053852754 A O HIS 31 A O HIS 54 A N LEU 12 A N LEU 35 A N LEU 11 A N LEU 34 A O ALA 51 A O ALA 74 A N THR 54 A N THR 77 A O ASN 77 A O ASN 100 A N ILE 74 A N ILE 97 A O ASP 95 A O ASP 118 A O ILE 188 A O ILE 211 A N TYR 176 A N TYR 199 A O TRP 177 A O TRP 200 A N VAL 153 A N VAL 176 A N LEU 154 A N LEU 177 A O ALA 204 A O ALA 227 A N LEU 203 A N LEU 226 A O ILE 230 A O ILE 253 A N VAL 231 A N VAL 254 A O GLY 258 A O GLY 281 A N LEU 259 A N LEU 282 A O VAL 279 A O VAL 302 1 A MSE -22 A MSE 1 1 Y 1 A HIS -21 A HIS 2 1 Y 1 A HIS -20 A HIS 3 1 Y 1 A HIS -19 A HIS 4 1 Y 1 A HIS -18 A HIS 5 1 Y 1 A HIS -17 A HIS 6 1 Y 1 A HIS -16 A HIS 7 1 Y 1 A SER -15 A SER 8 1 Y 1 A SER -14 A SER 9 1 Y 1 A GLY -13 A GLY 10 1 Y 1 A VAL -12 A VAL 11 1 Y 1 A ASP -11 A ASP 12 1 Y 1 A LEU -10 A LEU 13 1 Y 1 A GLY -9 A GLY 14 1 Y 1 A THR -8 A THR 15 1 Y 1 A GLU -7 A GLU 16 1 Y 1 A ASN -6 A ASN 17 1 Y 1 A LEU -5 A LEU 18 1 Y 1 A TYR -4 A TYR 19 1 Y 1 A PHE -3 A PHE 20 1 Y 1 A GLN -2 A GLN 21 1 Y 1 A SER -1 A SER 22 1 Y 1 A MSE 0 A MSE 23 1 Y 1 A LEU 1 A LEU 24 1 Y 1 A GLU 2 A GLU 25 1 Y 1 A PHE 3 A PHE 26 1 Y 1 A ARG 4 A ARG 27 1 Y 1 A ASN 5 A ASN 28 1 Y 1 A VAL 6 A VAL 29 1 Y 1 A LYS 7 A LYS 30 1 Y 1 A PRO 8 A PRO 31 1 Y 1 A ASP 9 A ASP 32 1 Y 1 A ALA 135 A ALA 158 1 Y 1 A ALA 136 A ALA 159 1 Y 1 A GLY 137 A GLY 160 1 Y 1 A GLU 138 A GLU 161 1 Y 1 A GLN 139 A GLN 162 1 Y 1 A LEU 140 A LEU 163 1 Y 1 A ALA 208 A ALA 231 1 Y 1 A ALA 209 A ALA 232 1 Y 1 A SER 210 A SER 233 1 Y 1 A ALA 211 A ALA 234 1 Y 1 A ALA 212 A ALA 235 1 Y 1 A THR 213 A THR 236 1 Y 1 A GLN 214 A GLN 237 1 Y 1 A ASN 215 A ASN 238 1 Y 1 A ILE 216 A ILE 239 1 Y 1 A VAL 217 A VAL 240 1 Y 1 A ASN 238 A ASN 261 1 Y 1 A VAL 239 A VAL 262 1 Y 1 A VAL 240 A VAL 263 1 Y 1 A ASP 241 A ASP 264 1 Y 1 A GLU 242 A GLU 265 1 Y 1 A ASP 243 A ASP 266 1 Y 1 A ALA 244 A ALA 267 1 Y 1 A LEU 245 A LEU 268 1 Y 1 A ILE 246 A ILE 269 1 Y 1 A GLU 247 A GLU 270 1 Y 1 A ALA 248 A ALA 271 1 Y 1 A LEU 249 A LEU 272 1 Y 1 A LYS 250 A LYS 273 1 Y 1 A SER 251 A SER 274 1 Y 1 A ASN 317 A ASN 340 1 Y 1 A A TRP ASN 177 178 -93.79 1 A SER 48 -108.81 54.29 1 A GLU 131 -79.86 24.17 1 A ASN 178 -130.06 -72.52 1 A ARG 179 81.47 -43.70 1 A VAL 234 -150.01 4.77 1 A ALA 235 -109.22 -95.89 1 A ALA 257 -175.44 141.28 1 A ASN 264 48.10 96.35 1 A ARG 269 -22.51 -51.57 1 A SER 270 104.82 -40.68 1 A THR 275 -43.00 173.34 1 A HIS 283 36.23 68.06 1 A LEU 303 -66.66 -74.08 -11.5719 -0.0000 2.0939 -9.8079 -0.0000 21.3798 0.2842 0.2554 0.2569 2.500 39.581 504 10177 4.95 95.23 0.46 RANDOM 1 Isotropic THROUGHOUT 0.11 MOLECULAR REPLACEMENT 33.12 0.90 1.11 pdb entry 2dbq Engh & Huber FLAT BULK SOLVENT MODEL 68.540 0.356 2.500 39.581 50 2113 0 0 2063 0.008 2078 1.226 2819 19.634 748 0.071 330 0.006 368 0.3648 0.2955 2.7516 111 2221 88.00 0.3122 0.2636 3.1496 134 2375 95.00 0.2556 0.2254 3.9676 119 2517 98.00 0.2717 0.2577 39.5856 140 2560 99.00 2.3 50 4DGS 12548 0 0 0.098 1 12.2 3.6 95.4 0.448 2.32 2.4 1.9 963 1 2.7 69 data collection CBASS phasing PHASER refinement PHENIX (phenix.refine) data reduction HKL-2000 data scaling HKL-2000 The crystals structure of dehydrogenase from Rhizobium meliloti 1 N N 2 N N A MSE 17 A MSE 40 HELX_P A GLU 23 A GLU 46 1 1 7 A GLU 23 A GLU 46 HELX_P A TYR 28 A TYR 51 1 2 6 A GLN 35 A GLN 58 HELX_P A ALA 37 A ALA 60 5 3 3 A ASP 38 A ASP 61 HELX_P A LEU 46 A LEU 69 1 4 9 A PRO 47 A PRO 70 HELX_P A ILE 49 A ILE 72 5 5 3 A SER 61 A SER 84 HELX_P A LEU 68 A LEU 91 1 6 8 A ASP 85 A ASP 108 HELX_P A ARG 92 A ARG 115 1 7 8 A LEU 103 A LEU 126 HELX_P A ARG 120 A ARG 143 1 8 18 A ARG 121 A ARG 144 HELX_P A GLU 131 A GLU 154 1 9 11 A GLY 157 A GLY 180 HELX_P A ALA 169 A ALA 192 1 10 13 A SER 192 A SER 215 HELX_P A ASP 199 A ASP 222 1 11 8 A ALA 219 A ALA 242 HELX_P A LEU 225 A LEU 248 1 12 7 A SER 270 A SER 293 HELX_P A THR 275 A THR 298 1 13 6 A THR 288 A THR 311 HELX_P A ALA 308 A ALA 331 1 14 21 covale 1.324 both A PRO 15 A C PRO 38 1_555 A MSE 16 A N MSE 39 1_555 covale 1.336 both A MSE 16 A C MSE 39 1_555 A MSE 17 A N MSE 40 1_555 covale 1.340 both A MSE 17 A C MSE 40 1_555 A PRO 18 A N PRO 41 1_555 covale 1.329 both A VAL 20 A C VAL 43 1_555 A MSE 21 A N MSE 44 1_555 covale 1.331 both A MSE 21 A C MSE 44 1_555 A ASP 22 A N ASP 45 1_555 covale 1.323 both A TRP 64 A C TRP 87 1_555 A MSE 65 A N MSE 88 1_555 covale 1.332 both A MSE 65 A C MSE 88 1_555 A GLU 66 A N GLU 89 1_555 covale 1.327 both A LEU 114 A C LEU 137 1_555 A MSE 115 A N MSE 138 1_555 covale 1.326 both A MSE 115 A C MSE 138 1_555 A LEU 116 A N LEU 139 1_555 covale 1.331 both A GLY 171 A C GLY 194 1_555 A MSE 172 A N MSE 195 1_555 covale 1.328 both A MSE 172 A C MSE 195 1_555 A SER 173 A N SER 196 1_555 covale 1.326 both A LEU 280 A C LEU 303 1_555 A MSE 281 A N MSE 304 1_555 covale 1.341 both A MSE 281 A C MSE 304 1_555 A PRO 282 A N PRO 305 1_555 covale 1.327 both A ARG 292 A C ARG 315 1_555 A MSE 293 A N MSE 316 1_555 covale 1.323 both A MSE 293 A C MSE 316 1_555 A ALA 294 A N ALA 317 1_555 covale 1.329 both A ALA 294 A C ALA 317 1_555 A MSE 295 A N MSE 318 1_555 covale 1.330 both A MSE 295 A C MSE 318 1_555 A GLY 296 A N GLY 319 1_555 OXIDOREDUCTASE Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, OXIDOREDUCTASE A GLU 265 A GLU 288 1 A PRO 266 A PRO 289 -5.08 Q931A1_RHIME UNP 1 2 Q931A1 EFRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVGT DKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGR ALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVD EDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTVN 2 317 4DGS 2 317 Q931A1 A 1 25 340 1 expression tag MSE -22 4DGS A Q931A1 UNP 1 1 expression tag HIS -21 4DGS A Q931A1 UNP 2 1 expression tag HIS -20 4DGS A Q931A1 UNP 3 1 expression tag HIS -19 4DGS A Q931A1 UNP 4 1 expression tag HIS -18 4DGS A Q931A1 UNP 5 1 expression tag HIS -17 4DGS A Q931A1 UNP 6 1 expression tag HIS -16 4DGS A Q931A1 UNP 7 1 expression tag SER -15 4DGS A Q931A1 UNP 8 1 expression tag SER -14 4DGS A Q931A1 UNP 9 1 expression tag GLY -13 4DGS A Q931A1 UNP 10 1 expression tag VAL -12 4DGS A Q931A1 UNP 11 1 expression tag ASP -11 4DGS A Q931A1 UNP 12 1 expression tag LEU -10 4DGS A Q931A1 UNP 13 1 expression tag GLY -9 4DGS A Q931A1 UNP 14 1 expression tag THR -8 4DGS A Q931A1 UNP 15 1 expression tag GLU -7 4DGS A Q931A1 UNP 16 1 expression tag ASN -6 4DGS A Q931A1 UNP 17 1 expression tag LEU -5 4DGS A Q931A1 UNP 18 1 expression tag TYR -4 4DGS A Q931A1 UNP 19 1 expression tag PHE -3 4DGS A Q931A1 UNP 20 1 expression tag GLN -2 4DGS A Q931A1 UNP 21 1 expression tag SER -1 4DGS A Q931A1 UNP 22 1 expression tag MSE 0 4DGS A Q931A1 UNP 23 1 expression tag LEU 1 4DGS A Q931A1 UNP 24 5 7 parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A HIS 31 A HIS 54 A ARG 32 A ARG 55 A LEU 11 A LEU 34 A LEU 12 A LEU 35 A ALA 51 A ALA 74 A GLY 55 A GLY 78 A ILE 73 A ILE 96 A ASN 77 A ASN 100 A ASP 95 A ASP 118 A THR 97 A THR 120 A ILE 188 A ILE 211 A ALA 189 A ALA 212 A SER 173 A SER 196 A TRP 177 A TRP 200 A ARG 150 A ARG 173 A LEU 154 A LEU 177 A VAL 202 A VAL 225 A VAL 205 A VAL 228 A ILE 230 A ILE 253 A ASN 233 A ASN 256 A GLY 256 A GLY 279 A LEU 259 A LEU 282 A THR 278 A THR 301 A LEU 280 A LEU 303 5 C 1 2 1