0.011330
0.006541
0.000000
0.000000
0.013083
0.000000
0.000000
0.000000
0.007440
0.000000
0.000000
0.000000
Holzapfel, G.
Mattos, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.000
90.000
120.000
88.261
88.261
134.403
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C4 H10 O2 S2
154.251
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C10 H17 N6 O13 P3
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
S
N
90
N
C
N
91
S
C
N
92
N
O
N
93
R
C
N
94
N
O
N
95
N
C
N
96
N
S
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
C
N
114
N
O
N
115
N
N
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
S
C
N
129
N
C
N
130
N
O
N
131
N
C
N
132
N
C
N
133
N
C
N
134
N
O
N
135
N
O
N
136
N
O
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
P
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
N
N
161
R
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
S
P
N
166
N
O
N
167
N
O
N
168
N
O
N
169
N
C
N
170
R
C
N
171
N
O
N
172
S
C
N
173
N
O
N
174
R
C
N
175
N
O
N
176
R
C
Y
177
N
N
Y
178
N
C
Y
179
N
N
Y
180
N
C
Y
181
N
C
N
182
N
O
Y
183
N
N
Y
184
N
C
N
185
N
N
Y
186
N
N
Y
187
N
C
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
Y
210
N
C
Y
211
N
N
Y
212
N
C
Y
213
N
C
Y
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
S
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
N
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
N
303
N
C
N
304
N
S
N
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
MG
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
O
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
R
C
N
378
N
O
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
Y
181
N
sing
Y
182
N
sing
Y
183
N
doub
N
184
N
sing
Y
185
N
sing
Y
186
N
sing
Y
187
N
doub
N
188
N
doub
Y
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
Y
193
N
doub
N
194
N
sing
N
195
N
sing
Y
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
doub
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
51
6114
6126
10.1021/bi300509j
22845804
Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition.
2012
10.2210/pdb4dlz/pdb
pdb_00004dlz
100
1
CCD
MARRESEARCH
crystal
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
22-BM
APS
1.0
SYNCHROTRON
APS BEAMLINE 22-BM
18876.178
GTPase HRas
1
man
polymer
40.078
CALCIUM ION
2
syn
non-polymer
24.305
MAGNESIUM ION
3
syn
non-polymer
154.251
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
2
syn
non-polymer
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
1
syn
non-polymer
18.015
water
162
nat
water
H-Ras-1, Ha-Ras, Transforming protein p21, c-H-ras, p21ras, GTPase HRas, N-terminally processed
no
no
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDEYMRTGEGFLC
VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV
REIRQH
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDEYMRTGEGFLC
VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV
REIRQH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
HRAS, HRAS1
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)
plasmid
pET21
1
2.67
53.91
VAPOR DIFFUSION, SITTING DROP
7.5
20% PEG 3350, 200 mM Ca Acetate, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Structure summary
Database references
Refinement description
Data collection
Database references
Derived calculations
1
0
2012-08-08
1
1
2012-08-15
1
2
2012-10-17
1
3
2017-11-15
1
4
2024-02-28
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-02-06
REL
REL
CA
CALCIUM ION
MG
MAGNESIUM ION
DTU
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
HOH
water
CA
202
2
CA
CA
201
A
MG
203
3
MG
MG
202
A
MG
204
3
MG
MG
203
A
DTU
208
4
DTU
DTU
204
A
MG
206
3
MG
MG
205
A
DTU
209
4
DTU
DTU
206
A
CA
207
2
CA
CA
207
A
GNP
201
5
GNP
GNP
208
A
HOH
301
6
HOH
HOH
301
A
HOH
302
6
HOH
HOH
302
A
HOH
304
6
HOH
HOH
303
A
HOH
306
6
HOH
HOH
304
A
HOH
307
6
HOH
HOH
305
A
HOH
308
6
HOH
HOH
306
A
HOH
309
6
HOH
HOH
307
A
HOH
310
6
HOH
HOH
308
A
HOH
311
6
HOH
HOH
309
A
HOH
312
6
HOH
HOH
310
A
HOH
313
6
HOH
HOH
311
A
HOH
314
6
HOH
HOH
312
A
HOH
315
6
HOH
HOH
313
A
HOH
316
6
HOH
HOH
314
A
HOH
317
6
HOH
HOH
315
A
HOH
318
6
HOH
HOH
316
A
HOH
320
6
HOH
HOH
317
A
HOH
321
6
HOH
HOH
318
A
HOH
322
6
HOH
HOH
319
A
HOH
323
6
HOH
HOH
320
A
HOH
324
6
HOH
HOH
321
A
HOH
326
6
HOH
HOH
322
A
HOH
327
6
HOH
HOH
323
A
HOH
328
6
HOH
HOH
324
A
HOH
329
6
HOH
HOH
325
A
HOH
330
6
HOH
HOH
326
A
HOH
331
6
HOH
HOH
327
A
HOH
332
6
HOH
HOH
328
A
HOH
333
6
HOH
HOH
329
A
HOH
334
6
HOH
HOH
330
A
HOH
336
6
HOH
HOH
331
A
HOH
337
6
HOH
HOH
332
A
HOH
338
6
HOH
HOH
333
A
HOH
339
6
HOH
HOH
334
A
HOH
341
6
HOH
HOH
335
A
HOH
342
6
HOH
HOH
336
A
HOH
344
6
HOH
HOH
337
A
HOH
345
6
HOH
HOH
338
A
HOH
346
6
HOH
HOH
339
A
HOH
347
6
HOH
HOH
340
A
HOH
348
6
HOH
HOH
341
A
HOH
349
6
HOH
HOH
342
A
HOH
350
6
HOH
HOH
343
A
HOH
351
6
HOH
HOH
344
A
HOH
352
6
HOH
HOH
345
A
HOH
353
6
HOH
HOH
346
A
HOH
354
6
HOH
HOH
347
A
HOH
355
6
HOH
HOH
348
A
HOH
356
6
HOH
HOH
349
A
HOH
357
6
HOH
HOH
350
A
HOH
359
6
HOH
HOH
351
A
HOH
360
6
HOH
HOH
352
A
HOH
361
6
HOH
HOH
353
A
HOH
363
6
HOH
HOH
354
A
HOH
364
6
HOH
HOH
355
A
HOH
365
6
HOH
HOH
356
A
HOH
366
6
HOH
HOH
357
A
HOH
368
6
HOH
HOH
358
A
HOH
369
6
HOH
HOH
359
A
HOH
370
6
HOH
HOH
360
A
HOH
371
6
HOH
HOH
361
A
HOH
372
6
HOH
HOH
362
A
HOH
373
6
HOH
HOH
363
A
HOH
374
6
HOH
HOH
364
A
HOH
375
6
HOH
HOH
365
A
HOH
376
6
HOH
HOH
366
A
HOH
377
6
HOH
HOH
367
A
HOH
379
6
HOH
HOH
368
A
HOH
380
6
HOH
HOH
369
A
HOH
381
6
HOH
HOH
370
A
HOH
382
6
HOH
HOH
371
A
HOH
384
6
HOH
HOH
372
A
HOH
385
6
HOH
HOH
373
A
HOH
388
6
HOH
HOH
374
A
HOH
389
6
HOH
HOH
375
A
HOH
390
6
HOH
HOH
376
A
HOH
392
6
HOH
HOH
377
A
HOH
393
6
HOH
HOH
378
A
HOH
394
6
HOH
HOH
379
A
HOH
395
6
HOH
HOH
380
A
HOH
396
6
HOH
HOH
381
A
HOH
397
6
HOH
HOH
382
A
HOH
398
6
HOH
HOH
383
A
HOH
401
6
HOH
HOH
384
A
HOH
403
6
HOH
HOH
385
A
HOH
404
6
HOH
HOH
386
A
HOH
405
6
HOH
HOH
387
A
HOH
406
6
HOH
HOH
388
A
HOH
407
6
HOH
HOH
389
A
HOH
410
6
HOH
HOH
390
A
HOH
412
6
HOH
HOH
391
A
HOH
413
6
HOH
HOH
392
A
HOH
414
6
HOH
HOH
393
A
HOH
415
6
HOH
HOH
394
A
HOH
416
6
HOH
HOH
395
A
HOH
417
6
HOH
HOH
396
A
HOH
418
6
HOH
HOH
397
A
HOH
420
6
HOH
HOH
398
A
HOH
421
6
HOH
HOH
399
A
HOH
423
6
HOH
HOH
400
A
HOH
424
6
HOH
HOH
401
A
HOH
426
6
HOH
HOH
402
A
HOH
427
6
HOH
HOH
403
A
HOH
429
6
HOH
HOH
404
A
HOH
430
6
HOH
HOH
405
A
HOH
434
6
HOH
HOH
406
A
HOH
439
6
HOH
HOH
407
A
HOH
440
6
HOH
HOH
408
A
HOH
442
6
HOH
HOH
409
A
HOH
450
6
HOH
HOH
410
A
HOH
459
6
HOH
HOH
411
A
HOH
463
6
HOH
HOH
412
A
HOH
468
6
HOH
HOH
413
A
HOH
470
6
HOH
HOH
414
A
HOH
471
6
HOH
HOH
415
A
HOH
472
6
HOH
HOH
416
A
HOH
476
6
HOH
HOH
417
A
HOH
482
6
HOH
HOH
418
A
HOH
485
6
HOH
HOH
419
A
HOH
495
6
HOH
HOH
420
A
HOH
503
6
HOH
HOH
421
A
HOH
505
6
HOH
HOH
422
A
HOH
507
6
HOH
HOH
423
A
HOH
508
6
HOH
HOH
424
A
HOH
512
6
HOH
HOH
425
A
HOH
519
6
HOH
HOH
426
A
HOH
524
6
HOH
HOH
427
A
HOH
175
6
HOH
HOH
428
A
HOH
542
6
HOH
HOH
429
A
HOH
543
6
HOH
HOH
430
A
HOH
544
6
HOH
HOH
431
A
HOH
1402
6
HOH
HOH
432
A
HOH
1403
6
HOH
HOH
433
A
HOH
1404
6
HOH
HOH
434
A
HOH
1405
6
HOH
HOH
435
A
HOH
1406
6
HOH
HOH
436
A
HOH
1407
6
HOH
HOH
437
A
HOH
1408
6
HOH
HOH
438
A
HOH
1409
6
HOH
HOH
439
A
HOH
1410
6
HOH
HOH
440
A
HOH
1411
6
HOH
HOH
441
A
HOH
1412
6
HOH
HOH
442
A
HOH
1413
6
HOH
HOH
443
A
HOH
1414
6
HOH
HOH
444
A
HOH
1415
6
HOH
HOH
445
A
HOH
1416
6
HOH
HOH
446
A
HOH
1417
6
HOH
HOH
447
A
HOH
1418
6
HOH
HOH
448
A
HOH
1419
6
HOH
HOH
449
A
HOH
1420
6
HOH
HOH
450
A
HOH
1421
6
HOH
HOH
451
A
HOH
1422
6
HOH
HOH
452
A
HOH
1423
6
HOH
HOH
453
A
HOH
1424
6
HOH
HOH
454
A
HOH
1425
6
HOH
HOH
455
A
HOH
1426
6
HOH
HOH
456
A
HOH
1427
6
HOH
HOH
457
A
HOH
1428
6
HOH
HOH
458
A
HOH
1429
6
HOH
HOH
459
A
HOH
1430
6
HOH
HOH
460
A
HOH
1431
6
HOH
HOH
461
A
HOH
388
6
HOH
HOH
462
A
MET
1
n
1
MET
1
A
THR
2
n
2
THR
2
A
GLU
3
n
3
GLU
3
A
TYR
4
n
4
TYR
4
A
LYS
5
n
5
LYS
5
A
LEU
6
n
6
LEU
6
A
VAL
7
n
7
VAL
7
A
VAL
8
n
8
VAL
8
A
VAL
9
n
9
VAL
9
A
GLY
10
n
10
GLY
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
GLY
13
n
13
GLY
13
A
VAL
14
n
14
VAL
14
A
GLY
15
n
15
GLY
15
A
LYS
16
n
16
LYS
16
A
SER
17
n
17
SER
17
A
ALA
18
n
18
ALA
18
A
LEU
19
n
19
LEU
19
A
THR
20
n
20
THR
20
A
ILE
21
n
21
ILE
21
A
GLN
22
n
22
GLN
22
A
LEU
23
n
23
LEU
23
A
ILE
24
n
24
ILE
24
A
GLN
25
n
25
GLN
25
A
ASN
26
n
26
ASN
26
A
HIS
27
n
27
HIS
27
A
PHE
28
n
28
PHE
28
A
VAL
29
n
29
VAL
29
A
ASP
30
n
30
ASP
30
A
GLU
31
n
31
GLU
31
A
TYR
32
n
32
TYR
32
A
ASP
33
n
33
ASP
33
A
PRO
34
n
34
PRO
34
A
THR
35
n
35
THR
35
A
ILE
36
n
36
ILE
36
A
GLU
37
n
37
GLU
37
A
ASP
38
n
38
ASP
38
A
SER
39
n
39
SER
39
A
TYR
40
n
40
TYR
40
A
ARG
41
n
41
ARG
41
A
LYS
42
n
42
LYS
42
A
GLN
43
n
43
GLN
43
A
VAL
44
n
44
VAL
44
A
VAL
45
n
45
VAL
45
A
ILE
46
n
46
ILE
46
A
ASP
47
n
47
ASP
47
A
GLY
48
n
48
GLY
48
A
GLU
49
n
49
GLU
49
A
THR
50
n
50
THR
50
A
CYS
51
n
51
CYS
51
A
LEU
52
n
52
LEU
52
A
LEU
53
n
53
LEU
53
A
ASP
54
n
54
ASP
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
ASP
57
n
57
ASP
57
A
THR
58
n
58
THR
58
A
ALA
59
n
59
ALA
59
A
GLY
60
n
60
GLY
60
A
GLN
61
n
61
GLN
61
A
GLU
62
n
62
GLU
62
A
GLU
63
n
63
GLU
63
A
TYR
64
n
64
TYR
64
A
SER
65
n
65
SER
65
A
ALA
66
n
66
ALA
66
A
MET
67
n
67
MET
67
A
ARG
68
n
68
ARG
68
A
ASP
69
n
69
ASP
69
A
GLU
70
n
70
GLU
70
A
TYR
71
n
71
TYR
71
A
MET
72
n
72
MET
72
A
ARG
73
n
73
ARG
73
A
THR
74
n
74
THR
74
A
GLY
75
n
75
GLY
75
A
GLU
76
n
76
GLU
76
A
GLY
77
n
77
GLY
77
A
PHE
78
n
78
PHE
78
A
LEU
79
n
79
LEU
79
A
CYS
80
n
80
CYS
80
A
VAL
81
n
81
VAL
81
A
PHE
82
n
82
PHE
82
A
ALA
83
n
83
ALA
83
A
ILE
84
n
84
ILE
84
A
ASN
85
n
85
ASN
85
A
ASN
86
n
86
ASN
86
A
THR
87
n
87
THR
87
A
LYS
88
n
88
LYS
88
A
SER
89
n
89
SER
89
A
PHE
90
n
90
PHE
90
A
GLU
91
n
91
GLU
91
A
ASP
92
n
92
ASP
92
A
ILE
93
n
93
ILE
93
A
HIS
94
n
94
HIS
94
A
GLN
95
n
95
GLN
95
A
TYR
96
n
96
TYR
96
A
ARG
97
n
97
ARG
97
A
GLU
98
n
98
GLU
98
A
GLN
99
n
99
GLN
99
A
ILE
100
n
100
ILE
100
A
LYS
101
n
101
LYS
101
A
ARG
102
n
102
ARG
102
A
VAL
103
n
103
VAL
103
A
LYS
104
n
104
LYS
104
A
ASP
105
n
105
ASP
105
A
SER
106
n
106
SER
106
A
ASP
107
n
107
ASP
107
A
ASP
108
n
108
ASP
108
A
VAL
109
n
109
VAL
109
A
PRO
110
n
110
PRO
110
A
MET
111
n
111
MET
111
A
VAL
112
n
112
VAL
112
A
LEU
113
n
113
LEU
113
A
VAL
114
n
114
VAL
114
A
GLY
115
n
115
GLY
115
A
ASN
116
n
116
ASN
116
A
LYS
117
n
117
LYS
117
A
CYS
118
n
118
CYS
118
A
ASP
119
n
119
ASP
119
A
LEU
120
n
120
LEU
120
A
ALA
121
n
121
ALA
121
A
ALA
122
n
122
ALA
122
A
ARG
123
n
123
ARG
123
A
THR
124
n
124
THR
124
A
VAL
125
n
125
VAL
125
A
GLU
126
n
126
GLU
126
A
SER
127
n
127
SER
127
A
ARG
128
n
128
ARG
128
A
GLN
129
n
129
GLN
129
A
ALA
130
n
130
ALA
130
A
GLN
131
n
131
GLN
131
A
ASP
132
n
132
ASP
132
A
LEU
133
n
133
LEU
133
A
ALA
134
n
134
ALA
134
A
ARG
135
n
135
ARG
135
A
SER
136
n
136
SER
136
A
TYR
137
n
137
TYR
137
A
GLY
138
n
138
GLY
138
A
ILE
139
n
139
ILE
139
A
PRO
140
n
140
PRO
140
A
TYR
141
n
141
TYR
141
A
ILE
142
n
142
ILE
142
A
GLU
143
n
143
GLU
143
A
THR
144
n
144
THR
144
A
SER
145
n
145
SER
145
A
ALA
146
n
146
ALA
146
A
LYS
147
n
147
LYS
147
A
THR
148
n
148
THR
148
A
ARG
149
n
149
ARG
149
A
GLN
150
n
150
GLN
150
A
GLY
151
n
151
GLY
151
A
VAL
152
n
152
VAL
152
A
GLU
153
n
153
GLU
153
A
ASP
154
n
154
ASP
154
A
ALA
155
n
155
ALA
155
A
PHE
156
n
156
PHE
156
A
TYR
157
n
157
TYR
157
A
THR
158
n
158
THR
158
A
LEU
159
n
159
LEU
159
A
VAL
160
n
160
VAL
160
A
ARG
161
n
161
ARG
161
A
GLU
162
n
162
GLU
162
A
ILE
163
n
163
ILE
163
A
ARG
164
n
164
ARG
164
A
GLN
165
n
165
GLN
165
A
HIS
166
n
166
HIS
166
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
6
hexameric
15750
-246
41340
A
GLU
3
A
O
GLU
3
1_555
A
MG
205
F
MG
MG
1_555
A
GLU
76
A
OE2
GLU
76
1_555
130.0
A
GLU
3
A
O
GLU
3
1_555
A
MG
205
F
MG
MG
1_555
A
GLU
76
A
OE1
GLU
76
1_555
81.1
A
GLU
76
A
OE2
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
A
GLU
76
A
OE1
GLU
76
1_555
49.2
A
GLU
3
A
O
GLU
3
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
436
J
O
HOH
1_555
94.7
A
GLU
76
A
OE2
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
436
J
O
HOH
1_555
91.0
A
GLU
76
A
OE1
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
436
J
O
HOH
1_555
90.5
A
GLU
3
A
O
GLU
3
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
455
J
O
HOH
1_555
80.7
A
GLU
76
A
OE2
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
455
J
O
HOH
1_555
148.2
A
GLU
76
A
OE1
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
455
J
O
HOH
1_555
161.4
A
HOH
436
J
O
HOH
1_555
A
MG
205
F
MG
MG
1_555
A
HOH
455
J
O
HOH
1_555
94.6
A
SER
17
A
OG
SER
17
1_555
A
MG
202
C
MG
MG
1_555
A
THR
35
A
OG1
THR
35
1_555
82.0
A
SER
17
A
OG
SER
17
1_555
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2G
GNP
1_555
172.0
A
THR
35
A
OG1
THR
35
1_555
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2G
GNP
1_555
90.3
A
SER
17
A
OG
SER
17
1_555
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2B
GNP
1_555
93.0
A
THR
35
A
OG1
THR
35
1_555
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2B
GNP
1_555
173.7
A
GNP
208
I
O2G
GNP
1_555
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2B
GNP
1_555
94.8
A
SER
17
A
OG
SER
17
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
301
J
O
HOH
1_555
90.5
A
THR
35
A
OG1
THR
35
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
301
J
O
HOH
1_555
88.5
A
GNP
208
I
O2G
GNP
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
301
J
O
HOH
1_555
91.4
A
GNP
208
I
O2B
GNP
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
301
J
O
HOH
1_555
87.7
A
SER
17
A
OG
SER
17
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
431
J
O
HOH
1_555
87.7
A
THR
35
A
OG1
THR
35
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
431
J
O
HOH
1_555
91.4
A
GNP
208
I
O2G
GNP
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
431
J
O
HOH
1_555
90.4
A
GNP
208
I
O2B
GNP
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
431
J
O
HOH
1_555
92.2
A
HOH
301
J
O
HOH
1_555
A
MG
202
C
MG
MG
1_555
A
HOH
431
J
O
HOH
1_555
178.2
A
PHE
28
A
O
PHE
28
1_555
A
CA
201
B
CA
CA
1_555
A
ASP
30
A
OD1
ASP
30
1_555
85.6
A
PHE
28
A
O
PHE
28
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
J
O
HOH
1_555
90.1
A
ASP
30
A
OD1
ASP
30
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
J
O
HOH
1_555
85.3
A
PHE
28
A
O
PHE
28
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
434
J
O
HOH
1_555
165.6
A
ASP
30
A
OD1
ASP
30
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
434
J
O
HOH
1_555
80.7
A
HOH
307
J
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
434
J
O
HOH
1_555
92.8
A
ARG
102
A
O
ARG
102
1_555
A
CA
207
H
CA
CA
1_555
A
ASP
105
A
OD1
ASP
105
1_555
87.2
A
ARG
102
A
O
ARG
102
1_555
A
CA
207
H
CA
CA
1_555
A
ASP
105
A
OD2
ASP
105
1_555
86.7
A
ASP
105
A
OD1
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
A
ASP
105
A
OD2
ASP
105
1_555
48.1
A
ARG
102
A
O
ARG
102
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
378
J
O
HOH
1_555
90.8
A
ASP
105
A
OD1
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
378
J
O
HOH
1_555
90.6
A
ASP
105
A
OD2
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
378
J
O
HOH
1_555
138.6
A
ARG
102
A
O
ARG
102
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
381
J
O
HOH
1_555
89.2
A
ASP
105
A
OD1
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
381
J
O
HOH
1_555
89.4
A
ASP
105
A
OD2
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
381
J
O
HOH
1_555
41.4
A
HOH
378
J
O
HOH
1_555
A
CA
207
H
CA
CA
1_555
A
HOH
381
J
O
HOH
1_555
180.0
A
HOH
336
J
O
HOH
1_555
A
MG
203
D
MG
MG
1_555
A
HOH
355
J
O
HOH
1_555
80.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_675
-y+1,x-y+2,z
crystal symmetry operation
0.0000000000
152.8725363268
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_465
-x+y-1,-x+1,z
crystal symmetry operation
-132.3915000000
76.4362681634
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_464
y-1,x+1,-z-1
crystal symmetry operation
-132.3915000000
76.4362681634
-134.4030000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_674
x-y+1,-y+2,-z-1
crystal symmetry operation
0.0000000000
152.8725363268
-134.4030000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
6_554
-x,-x+y,-z-1
crystal symmetry operation
0.0000000000
0.0000000000
-134.4030000000
A
N
ASP
38
A
N
ASP
38
A
O
ASP
57
A
O
ASP
57
A
O
LEU
52
A
O
LEU
52
A
N
TYR
4
A
N
TYR
4
A
N
VAL
9
A
N
VAL
9
A
O
VAL
81
A
O
VAL
81
A
N
PHE
82
A
N
PHE
82
A
O
ASN
116
A
O
ASN
116
A
N
LEU
113
A
N
LEU
113
A
O
ILE
142
A
O
ILE
142
1
A
MG
203
D
MG
1
A
CA
207
H
CA
1
A
HOH
360
J
HOH
1
A
HOH
377
J
HOH
1
A
HOH
378
J
HOH
1
A
HOH
381
J
HOH
1
A
HOH
386
J
HOH
1
A
HOH
389
J
HOH
1
A
HOH
408
J
HOH
1
A
HOH
456
J
HOH
1
A
HOH
457
J
HOH
1
A
CG
GLU
62
A
CG
GLU
62
1
Y
1
A
CD
GLU
62
A
CD
GLU
62
1
Y
1
A
OE1
GLU
62
A
OE1
GLU
62
1
Y
1
A
OE2
GLU
62
A
OE2
GLU
62
1
Y
1
A
CG
GLU
63
A
CG
GLU
63
1
Y
1
A
CD
GLU
63
A
CD
GLU
63
1
Y
1
A
OE1
GLU
63
A
OE1
GLU
63
1
Y
1
A
OE2
GLU
63
A
OE2
GLU
63
1
Y
1
A
CG
ARG
128
A
CG
ARG
128
1
Y
1
A
CD
ARG
128
A
CD
ARG
128
1
Y
1
A
NE
ARG
128
A
NE
ARG
128
1
Y
1
A
CZ
ARG
128
A
CZ
ARG
128
1
Y
1
A
NH1
ARG
128
A
NH1
ARG
128
1
Y
1
A
NH2
ARG
128
A
NH2
ARG
128
1
Y
1
A
ILE
36
-89.06
-83.93
1
A
ALA
66
-18.38
-91.93
1
A
LYS
117
71.09
32.85
1
A
ARG
149
79.62
-5.74
82.400
21.1456
8.730
0.7221
-0.0000
-0.0000
0.7221
-0.0000
-1.4442
0.1842
0.1617
0.1636
0.1636
1.6620
26.5410
1999
23952
23952
8.3500
99.9400
1.000
0.430
0.9036
0.3600
random
1
1.340
MOLECULAR REPLACEMENT
16.3100
0.8300
1.1000
ML
FLAT BULK SOLVENT MODEL
53.2330
0.3660
1.6620
26.5410
162
1524
53
0
1309
0.007
1398
1.152
1899
0.072
214
0.004
243
15.012
529
0.2934
0.2623
1.7035
140
1537
1677
14
100.0000
0.2116
0.2088
1.7495
141
1547
1688
14
100.0000
0.2029
0.1786
1.8010
142
1560
1702
14
100.0000
0.1818
0.1579
1.8591
139
1528
1667
14
100.0000
0.1636
0.1411
1.9255
143
1561
1704
14
100.0000
0.1943
0.1423
2.0026
142
1557
1699
14
100.0000
0.1730
0.1456
2.0937
142
1561
1703
14
100.0000
0.1860
0.1546
2.2040
142
1562
1704
14
100.0000
0.1910
0.1551
2.3421
143
1569
1712
14
100.0000
0.1798
0.1545
2.5228
143
1570
1713
14
100.0000
0.1771
0.1602
2.7764
142
1566
1708
14
100.0000
0.1942
0.1630
3.1776
143
1579
1722
14
100.0000
0.1611
0.1478
4.0012
146
1596
1742
14
100.0000
0.1878
0.1746
26.5448
151
1660
1811
14
100.0000
1.660
50.000
4DLZ
23956
23956
0
0
0.082
1.374
1
9.700
11.000
100.000
0.654
1.660
1.690
1183
0.819
1
9.300
100.000
0.598
1.690
1.720
1169
0.875
1
10.300
100.000
0.507
1.720
1.750
1186
0.879
1
10.900
100.000
0.421
1.750
1.790
1183
0.886
1
11.000
100.000
0.350
1.790
1.830
1176
0.889
1
11.100
100.000
0.297
1.830
1.870
1206
0.944
1
11.100
100.000
0.237
1.870
1.920
1176
0.957
1
11.100
100.000
0.201
1.920
1.970
1176
0.994
1
11.200
100.000
0.168
1.970
2.030
1187
1.033
1
11.100
100.000
0.141
2.030
2.090
1201
1.102
1
11.200
100.000
0.120
2.090
2.170
1178
1.144
1
11.100
100.000
0.107
2.170
2.250
1210
1.199
1
11.200
100.000
0.093
2.250
2.360
1196
1.246
1
11.200
100.000
0.086
2.360
2.480
1189
1.399
1
11.200
100.000
0.080
2.480
2.630
1206
1.523
1
11.200
100.000
0.079
2.630
2.840
1211
1.824
1
11.200
100.000
0.075
2.840
3.120
1196
2.370
1
11.000
100.000
0.063
3.120
3.580
1222
2.561
1
11.000
100.000
0.051
3.580
4.500
1228
2.405
1
10.900
100.000
0.045
4.500
50.000
1277
2.217
1
10.500
99.300
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.1_743
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
HKL-2000
data reduction
HKL-2000
phasing
PHENIX
H-Ras Set 2 Ca(OAc)2/DTE, ordered off
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
4
N
N
2
N
N
5
N
N
6
N
N
A
GLY
15
A
GLY
15
HELX_P
A
ASN
26
A
ASN
26
1
1
12
A
GLN
61
A
GLN
61
HELX_P
A
SER
65
A
SER
65
5
2
5
A
MET
67
A
MET
67
HELX_P
A
ARG
73
A
ARG
73
1
3
7
A
ASN
86
A
ASN
86
HELX_P
A
ASP
92
A
ASP
92
1
4
7
A
ASP
92
A
ASP
92
HELX_P
A
ASP
105
A
ASP
105
1
5
14
A
GLU
126
A
GLU
126
HELX_P
A
GLY
138
A
GLY
138
1
6
13
A
GLY
151
A
GLY
151
HELX_P
A
ARG
164
A
ARG
164
1
7
14
metalc
2.373
A
GLU
3
A
O
GLU
3
1_555
A
MG
205
F
MG
MG
1_555
metalc
2.086
A
SER
17
A
OG
SER
17
1_555
A
MG
202
C
MG
MG
1_555
metalc
2.382
A
PHE
28
A
O
PHE
28
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.401
A
ASP
30
A
OD1
ASP
30
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.141
A
THR
35
A
OG1
THR
35
1_555
A
MG
202
C
MG
MG
1_555
metalc
2.514
A
GLU
76
A
OE2
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
metalc
2.730
A
GLU
76
A
OE1
GLU
76
1_555
A
MG
205
F
MG
MG
1_555
metalc
2.306
A
ARG
102
A
O
ARG
102
1_555
A
CA
207
H
CA
CA
1_555
metalc
2.491
A
ASP
105
A
OD1
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
metalc
2.859
A
ASP
105
A
OD2
ASP
105
1_555
A
CA
207
H
CA
CA
1_555
metalc
2.461
A
CA
201
B
CA
CA
1_555
A
HOH
307
J
O
HOH
1_555
metalc
2.513
A
CA
201
B
CA
CA
1_555
A
HOH
434
J
O
HOH
1_555
metalc
2.083
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2G
GNP
1_555
metalc
2.116
A
MG
202
C
MG
MG
1_555
A
GNP
208
I
O2B
GNP
1_555
metalc
2.196
A
MG
202
C
MG
MG
1_555
A
HOH
301
J
O
HOH
1_555
metalc
2.104
A
MG
202
C
MG
MG
1_555
A
HOH
431
J
O
HOH
1_555
metalc
2.332
A
MG
203
D
MG
MG
1_555
A
HOH
336
J
O
HOH
1_555
metalc
2.238
A
MG
203
D
MG
MG
1_555
A
HOH
355
J
O
HOH
1_555
metalc
2.492
A
MG
205
F
MG
MG
1_555
A
HOH
436
J
O
HOH
1_555
metalc
2.639
A
MG
205
F
MG
MG
1_555
A
HOH
455
J
O
HOH
1_555
metalc
2.695
A
CA
207
H
CA
CA
1_555
A
HOH
378
J
O
HOH
1_555
metalc
3.183
A
CA
207
H
CA
CA
1_555
A
HOH
381
J
O
HOH
1_555
SIGNALING PROTEIN
GTP-BINDING, NUCLEOTIDE BINDING, SIGNALING PROTEIN
RASH_HUMAN
UNP
1
1
P01112
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC
VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV
REIRQH
1
166
4DLZ
1
166
P01112
A
1
1
166
1
GLN
conflict
GLU
70
4DLZ
A
P01112
UNP
70
70
6
anti-parallel
parallel
parallel
parallel
parallel
A
GLU
37
A
GLU
37
A
ILE
46
A
ILE
46
A
GLU
49
A
GLU
49
A
THR
58
A
THR
58
A
THR
2
A
THR
2
A
GLY
10
A
GLY
10
A
GLY
77
A
GLY
77
A
ALA
83
A
ALA
83
A
MET
111
A
MET
111
A
ASN
116
A
ASN
116
A
TYR
141
A
TYR
141
A
GLU
143
A
GLU
143
BINDING SITE FOR RESIDUE CA A 201
A
CA
201
Software
6
BINDING SITE FOR RESIDUE MG A 202
A
MG
202
Software
5
BINDING SITE FOR RESIDUE MG A 203
A
MG
203
Software
9
BINDING SITE FOR RESIDUE DTU A 204
A
DTU
204
Software
3
BINDING SITE FOR RESIDUE MG A 205
A
MG
205
Software
5
BINDING SITE FOR RESIDUE DTU A 206
A
DTU
206
Software
3
BINDING SITE FOR RESIDUE CA A 207
A
CA
207
Software
6
BINDING SITE FOR RESIDUE GNP A 208
A
GNP
208
Software
31
A
PHE
28
A
PHE
28
6
1_555
A
ASP
30
A
ASP
30
6
1_555
A
GLU
31
A
GLU
31
6
5_674
A
ASP
33
A
ASP
33
6
5_674
A
HOH
307
J
HOH
6
1_555
A
HOH
434
J
HOH
6
1_555
A
SER
17
A
SER
17
5
1_555
A
THR
35
A
THR
35
5
1_555
A
GNP
208
I
GNP
5
1_555
A
HOH
301
J
HOH
5
1_555
A
HOH
431
J
HOH
5
1_555
A
HOH
336
J
HOH
9
1_555
A
HOH
336
J
HOH
9
2_665
A
HOH
336
J
HOH
9
3_565
A
HOH
355
J
HOH
9
3_565
A
HOH
355
J
HOH
9
2_665
A
HOH
355
J
HOH
9
1_555
A
HOH
408
J
HOH
9
3_565
A
HOH
408
J
HOH
9
2_665
A
HOH
408
J
HOH
9
1_555
A
ARG
68
A
ARG
68
3
1_555
A
GLN
95
A
GLN
95
3
1_555
A
TYR
96
A
TYR
96
3
1_555
A
GLU
3
A
GLU
3
5
1_555
A
GLU
76
A
GLU
76
5
1_555
A
HOH
407
J
HOH
5
1_555
A
HOH
436
J
HOH
5
1_555
A
HOH
455
J
HOH
5
1_555
A
TYR
32
A
TYR
32
3
1_555
A
PRO
34
A
PRO
34
3
1_555
A
HOH
443
J
HOH
3
1_555
A
ARG
102
A
ARG
102
6
6_554
A
ARG
102
A
ARG
102
6
1_555
A
ASP
105
A
ASP
105
6
6_554
A
ASP
105
A
ASP
105
6
1_555
A
HOH
378
J
HOH
6
6_554
A
HOH
378
J
HOH
6
1_555
A
GLY
12
A
GLY
12
31
1_555
A
GLY
13
A
GLY
13
31
1_555
A
VAL
14
A
VAL
14
31
1_555
A
GLY
15
A
GLY
15
31
1_555
A
LYS
16
A
LYS
16
31
1_555
A
SER
17
A
SER
17
31
1_555
A
ALA
18
A
ALA
18
31
1_555
A
PHE
28
A
PHE
28
31
1_555
A
VAL
29
A
VAL
29
31
1_555
A
ASP
30
A
ASP
30
31
1_555
A
GLU
31
A
GLU
31
31
1_555
A
TYR
32
A
TYR
32
31
1_555
A
PRO
34
A
PRO
34
31
1_555
A
THR
35
A
THR
35
31
1_555
A
GLY
60
A
GLY
60
31
1_555
A
GLN
61
A
GLN
61
31
1_555
A
ASN
116
A
ASN
116
31
1_555
A
LYS
117
A
LYS
117
31
1_555
A
ASP
119
A
ASP
119
31
1_555
A
LEU
120
A
LEU
120
31
1_555
A
SER
145
A
SER
145
31
1_555
A
ALA
146
A
ALA
146
31
1_555
A
LYS
147
A
LYS
147
31
1_555
A
MG
202
C
MG
31
1_555
A
HOH
301
J
HOH
31
1_555
A
HOH
303
J
HOH
31
1_555
A
HOH
323
J
HOH
31
1_555
A
HOH
330
J
HOH
31
1_555
A
HOH
376
J
HOH
31
1_555
A
HOH
428
J
HOH
31
1_555
A
HOH
431
J
HOH
31
1_555
155
H 3 2