0.007736 0.000000 0.000000 0.000000 0.007736 0.000000 0.000000 0.000000 0.007736 0.00000 0.00000 0.00000 Hamiaux, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.000 90.000 90.000 129.260 129.260 129.260 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C4 H10 O2 S2 154.251 (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N S N 89 N C N 90 S C N 91 N O N 92 S C N 93 N O N 94 N C N 95 N S N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N N N 107 S C N 108 N C N 109 N O N 110 N C N 111 N C N 112 N C N 113 N O N 114 N N N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N N N 127 S C N 128 N C N 129 N O N 130 N C N 131 N C N 132 N C N 133 N O N 134 N O N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 N C N 147 N C N 148 N O N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N C N 156 N O N 157 N C N 158 N O N 159 N C N 160 N O N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C Y 174 N C Y 175 N N Y 176 N C Y 177 N C Y 178 N N N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N O N 191 N H N 192 N H N 193 N N N 194 S C N 195 N C N 196 N O N 197 S C N 198 N C N 199 N C N 200 N C N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N N N 216 S C N 217 N C N 218 N O N 219 N C N 220 N C N 221 N C N 222 N C N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N C N 244 N C N 245 N N N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N S N 269 N C N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C N 327 N O N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 R C N 341 N O N 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N N Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C Y 390 N C N 391 N O N 392 N O N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 N C N 409 N C N 410 N C N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing Y 170 N sing Y 171 N doub Y 172 N doub N 173 N sing Y 174 N sing N 175 N sing Y 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing Y 278 N doub Y 279 N sing Y 280 N sing N 281 N sing Y 282 N doub N 283 N sing Y 284 N doub N 285 N sing Y 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N doub N 343 N sing N 344 N sing N 345 N sing N 346 N sing Y 347 N doub Y 348 N sing Y 349 N sing N 350 N sing Y 351 N doub Y 352 N sing Y 353 N sing N 354 N sing Y 355 N sing Y 356 N doub N 357 N sing Y 358 N doub N 359 N sing Y 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing Y 375 N doub Y 376 N sing Y 377 N sing N 378 N sing Y 379 N doub N 380 N sing Y 381 N doub N 382 N sing Y 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing UK Curr.Biol. CUBLE2 2060 0960-9822 22 2032 2036 10.1016/j.cub.2012.08.007 22959345 DAD2 Is an alpha/beta Hydrolase likely to Be Involved in the Perception of the Plant Branching Hormone, Strigolactone 2012 10.2210/pdb4dnp/pdb pdb_00004dnp 100 1 CCD 2011-03-11 ADSC QUANTUM 210r SINGLE WAVELENGTH M x-ray 1 0.979417 1.0 MX2 Australian Synchrotron 0.979417 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 29861.180 DAD2 1 man polymer 154.251 (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 182 nat water no no GGMGQTLLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDL LHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGF APLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTV HWLNIEGHLPHLSAPTLLAQELRRALSHR GGMGQTLLDALNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDL LHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGF APLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTV HWLNIEGHLPHLSAPTLLAQELRRALSHR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n gene was codon optimized for E.coli expression sample dad2 4102 Petunia hybrida 562 Escherichia coli Rosetta gami 2 plasmid pDEST566 1 3.01 59.18 VAPOR DIFFUSION 7.1 (NH4)2HPO4 0.6M, pH 7.1, vapor diffusion, temperature 291K 291 pdbx_struct_assembly_auth_evidence chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Database references Author supporting evidence Data collection Database references Derived calculations 1 0 2012-11-14 1 1 2013-06-26 1 2 2017-10-25 1 3 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-02-08 REL REL DTV (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL GOL GLYCEROL HOH water DTV 1 2 DTV DTV 301 A GOL 1 3 GOL GOL 302 A HOH 1 4 HOH HOH 401 A HOH 2 4 HOH HOH 402 A HOH 3 4 HOH HOH 403 A HOH 4 4 HOH HOH 404 A HOH 5 4 HOH HOH 405 A HOH 6 4 HOH HOH 406 A HOH 7 4 HOH HOH 407 A HOH 8 4 HOH HOH 408 A HOH 9 4 HOH HOH 409 A HOH 10 4 HOH HOH 410 A HOH 11 4 HOH HOH 411 A HOH 12 4 HOH HOH 412 A HOH 14 4 HOH HOH 413 A HOH 15 4 HOH HOH 414 A HOH 16 4 HOH HOH 415 A HOH 17 4 HOH HOH 416 A HOH 19 4 HOH HOH 417 A HOH 20 4 HOH HOH 418 A HOH 21 4 HOH HOH 419 A HOH 22 4 HOH HOH 420 A HOH 23 4 HOH HOH 421 A HOH 24 4 HOH HOH 422 A HOH 25 4 HOH HOH 423 A HOH 26 4 HOH HOH 424 A HOH 27 4 HOH HOH 425 A HOH 28 4 HOH HOH 426 A HOH 29 4 HOH HOH 427 A HOH 30 4 HOH HOH 428 A HOH 31 4 HOH HOH 429 A HOH 32 4 HOH HOH 430 A HOH 33 4 HOH HOH 431 A HOH 34 4 HOH HOH 432 A HOH 35 4 HOH HOH 433 A HOH 36 4 HOH HOH 434 A HOH 37 4 HOH HOH 435 A HOH 38 4 HOH HOH 436 A HOH 39 4 HOH HOH 437 A HOH 40 4 HOH HOH 438 A HOH 42 4 HOH HOH 439 A HOH 43 4 HOH HOH 440 A HOH 44 4 HOH HOH 441 A HOH 45 4 HOH HOH 442 A HOH 46 4 HOH HOH 443 A HOH 47 4 HOH HOH 444 A HOH 48 4 HOH HOH 445 A HOH 49 4 HOH HOH 446 A HOH 50 4 HOH HOH 447 A HOH 51 4 HOH HOH 448 A HOH 53 4 HOH HOH 449 A HOH 54 4 HOH HOH 450 A HOH 55 4 HOH HOH 451 A HOH 56 4 HOH HOH 452 A HOH 58 4 HOH HOH 453 A HOH 59 4 HOH HOH 454 A HOH 60 4 HOH HOH 455 A HOH 61 4 HOH HOH 456 A HOH 62 4 HOH HOH 457 A HOH 63 4 HOH HOH 458 A HOH 64 4 HOH HOH 459 A HOH 65 4 HOH HOH 460 A HOH 66 4 HOH HOH 461 A HOH 67 4 HOH HOH 462 A HOH 68 4 HOH HOH 463 A HOH 69 4 HOH HOH 464 A HOH 70 4 HOH HOH 465 A HOH 72 4 HOH HOH 466 A HOH 73 4 HOH HOH 467 A HOH 74 4 HOH HOH 468 A HOH 75 4 HOH HOH 469 A HOH 76 4 HOH HOH 470 A HOH 77 4 HOH HOH 471 A HOH 78 4 HOH HOH 472 A HOH 79 4 HOH HOH 473 A HOH 80 4 HOH HOH 474 A HOH 81 4 HOH HOH 475 A HOH 83 4 HOH HOH 476 A HOH 85 4 HOH HOH 477 A HOH 86 4 HOH HOH 478 A HOH 89 4 HOH HOH 479 A HOH 92 4 HOH HOH 480 A HOH 94 4 HOH HOH 481 A HOH 95 4 HOH HOH 482 A HOH 96 4 HOH HOH 483 A HOH 97 4 HOH HOH 484 A HOH 98 4 HOH HOH 485 A HOH 101 4 HOH HOH 486 A HOH 103 4 HOH HOH 487 A HOH 104 4 HOH HOH 488 A HOH 105 4 HOH HOH 489 A HOH 106 4 HOH HOH 490 A HOH 107 4 HOH HOH 491 A HOH 110 4 HOH HOH 492 A HOH 112 4 HOH HOH 493 A HOH 113 4 HOH HOH 494 A HOH 114 4 HOH HOH 495 A HOH 116 4 HOH HOH 496 A HOH 117 4 HOH HOH 497 A HOH 118 4 HOH HOH 498 A HOH 120 4 HOH HOH 499 A HOH 121 4 HOH HOH 500 A HOH 122 4 HOH HOH 501 A HOH 125 4 HOH HOH 502 A HOH 126 4 HOH HOH 503 A HOH 127 4 HOH HOH 504 A HOH 129 4 HOH HOH 505 A HOH 130 4 HOH HOH 506 A HOH 132 4 HOH HOH 507 A HOH 133 4 HOH HOH 508 A HOH 135 4 HOH HOH 509 A HOH 138 4 HOH HOH 510 A HOH 139 4 HOH HOH 511 A HOH 140 4 HOH HOH 512 A HOH 141 4 HOH HOH 513 A HOH 142 4 HOH HOH 514 A HOH 143 4 HOH HOH 515 A HOH 144 4 HOH HOH 516 A HOH 145 4 HOH HOH 517 A HOH 146 4 HOH HOH 518 A HOH 147 4 HOH HOH 519 A HOH 148 4 HOH HOH 520 A HOH 149 4 HOH HOH 521 A HOH 150 4 HOH HOH 522 A HOH 151 4 HOH HOH 523 A HOH 152 4 HOH HOH 524 A HOH 153 4 HOH HOH 525 A HOH 155 4 HOH HOH 526 A HOH 156 4 HOH HOH 527 A HOH 157 4 HOH HOH 528 A HOH 158 4 HOH HOH 529 A HOH 159 4 HOH HOH 530 A HOH 160 4 HOH HOH 531 A HOH 161 4 HOH HOH 532 A HOH 162 4 HOH HOH 533 A HOH 163 4 HOH HOH 534 A HOH 164 4 HOH HOH 535 A HOH 165 4 HOH HOH 536 A HOH 166 4 HOH HOH 537 A HOH 167 4 HOH HOH 538 A HOH 168 4 HOH HOH 539 A HOH 169 4 HOH HOH 540 A HOH 170 4 HOH HOH 541 A HOH 171 4 HOH HOH 542 A HOH 173 4 HOH HOH 543 A HOH 174 4 HOH HOH 544 A HOH 176 4 HOH HOH 545 A HOH 177 4 HOH HOH 546 A HOH 178 4 HOH HOH 547 A HOH 179 4 HOH HOH 548 A HOH 180 4 HOH HOH 549 A HOH 181 4 HOH HOH 550 A HOH 182 4 HOH HOH 551 A HOH 183 4 HOH HOH 552 A HOH 184 4 HOH HOH 553 A HOH 186 4 HOH HOH 554 A HOH 187 4 HOH HOH 555 A HOH 188 4 HOH HOH 556 A HOH 189 4 HOH HOH 557 A HOH 190 4 HOH HOH 558 A HOH 191 4 HOH HOH 559 A HOH 192 4 HOH HOH 560 A HOH 201 4 HOH HOH 561 A HOH 202 4 HOH HOH 562 A HOH 203 4 HOH HOH 563 A HOH 205 4 HOH HOH 564 A HOH 206 4 HOH HOH 565 A HOH 207 4 HOH HOH 566 A HOH 208 4 HOH HOH 567 A HOH 209 4 HOH HOH 568 A HOH 210 4 HOH HOH 569 A HOH 211 4 HOH HOH 570 A HOH 212 4 HOH HOH 571 A HOH 213 4 HOH HOH 572 A HOH 214 4 HOH HOH 573 A HOH 215 4 HOH HOH 574 A HOH 216 4 HOH HOH 575 A HOH 217 4 HOH HOH 576 A HOH 218 4 HOH HOH 577 A HOH 219 4 HOH HOH 578 A HOH 220 4 HOH HOH 579 A HOH 221 4 HOH HOH 580 A HOH 222 4 HOH HOH 581 A HOH 223 4 HOH HOH 582 A 32.080 2.500 2.500 40.880 40.880 Phaser MODE: MR_AUTO n 1 -1 A n 2 0 A n 3 1 A n 4 2 A GLN 3 n 5 GLN 3 A THR 4 n 6 THR 4 A LEU 5 n 7 LEU 5 A LEU 6 n 8 LEU 6 A ASP 7 n 9 ASP 7 A ALA 8 n 10 ALA 8 A LEU 9 n 11 LEU 9 A ASN 10 n 12 ASN 10 A VAL 11 n 13 VAL 11 A ARG 12 n 14 ARG 12 A VAL 13 n 15 VAL 13 A VAL 14 n 16 VAL 14 A GLY 15 n 17 GLY 15 A SER 16 n 18 SER 16 A GLY 17 n 19 GLY 17 A GLU 18 n 20 GLU 18 A ARG 19 n 21 ARG 19 A VAL 20 n 22 VAL 20 A LEU 21 n 23 LEU 21 A VAL 22 n 24 VAL 22 A LEU 23 n 25 LEU 23 A ALA 24 n 26 ALA 24 A HIS 25 n 27 HIS 25 A GLY 26 n 28 GLY 26 A PHE 27 n 29 PHE 27 A GLY 28 n 30 GLY 28 A THR 29 n 31 THR 29 A ASP 30 n 32 ASP 30 A GLN 31 n 33 GLN 31 A SER 32 n 34 SER 32 A ALA 33 n 35 ALA 33 A TRP 34 n 36 TRP 34 A ASN 35 n 37 ASN 35 A ARG 36 n 38 ARG 36 A ILE 37 n 39 ILE 37 A LEU 38 n 40 LEU 38 A PRO 39 n 41 PRO 39 A PHE 40 n 42 PHE 40 A PHE 41 n 43 PHE 41 A LEU 42 n 44 LEU 42 A ARG 43 n 45 ARG 43 A ASP 44 n 46 ASP 44 A TYR 45 n 47 TYR 45 A ARG 46 n 48 ARG 46 A VAL 47 n 49 VAL 47 A VAL 48 n 50 VAL 48 A LEU 49 n 51 LEU 49 A TYR 50 n 52 TYR 50 A ASP 51 n 53 ASP 51 A LEU 52 n 54 LEU 52 A VAL 53 n 55 VAL 53 A CYS 54 n 56 CYS 54 A ALA 55 n 57 ALA 55 A GLY 56 n 58 GLY 56 A SER 57 n 59 SER 57 A VAL 58 n 60 VAL 58 A ASN 59 n 61 ASN 59 A PRO 60 n 62 PRO 60 A ASP 61 n 63 ASP 61 A PHE 62 n 64 PHE 62 A PHE 63 n 65 PHE 63 A ASP 64 n 66 ASP 64 A PHE 65 n 67 PHE 65 A ARG 66 n 68 ARG 66 A ARG 67 n 69 ARG 67 A TYR 68 n 70 TYR 68 A THR 69 n 71 THR 69 A THR 70 n 72 THR 70 A LEU 71 n 73 LEU 71 A ASP 72 n 74 ASP 72 A PRO 73 n 75 PRO 73 A TYR 74 n 76 TYR 74 A VAL 75 n 77 VAL 75 A ASP 76 n 78 ASP 76 A ASP 77 n 79 ASP 77 A LEU 78 n 80 LEU 78 A LEU 79 n 81 LEU 79 A HIS 80 n 82 HIS 80 A ILE 81 n 83 ILE 81 A LEU 82 n 84 LEU 82 A ASP 83 n 85 ASP 83 A ALA 84 n 86 ALA 84 A LEU 85 n 87 LEU 85 A GLY 86 n 88 GLY 86 A ILE 87 n 89 ILE 87 A ASP 88 n 90 ASP 88 A CYS 89 n 91 CYS 89 A CYS 90 n 92 CYS 90 A ALA 91 n 93 ALA 91 A TYR 92 n 94 TYR 92 A VAL 93 n 95 VAL 93 A GLY 94 n 96 GLY 94 A HIS 95 n 97 HIS 95 A SER 96 n 98 SER 96 A VAL 97 n 99 VAL 97 A SER 98 n 100 SER 98 A ALA 99 n 101 ALA 99 A MET 100 n 102 MET 100 A ILE 101 n 103 ILE 101 A GLY 102 n 104 GLY 102 A ILE 103 n 105 ILE 103 A LEU 104 n 106 LEU 104 A ALA 105 n 107 ALA 105 A SER 106 n 108 SER 106 A ILE 107 n 109 ILE 107 A ARG 108 n 110 ARG 108 A ARG 109 n 111 ARG 109 A PRO 110 n 112 PRO 110 A GLU 111 n 113 GLU 111 A LEU 112 n 114 LEU 112 A PHE 113 n 115 PHE 113 A SER 114 n 116 SER 114 A LYS 115 n 117 LYS 115 A LEU 116 n 118 LEU 116 A ILE 117 n 119 ILE 117 A LEU 118 n 120 LEU 118 A ILE 119 n 121 ILE 119 A GLY 120 n 122 GLY 120 A ALA 121 n 123 ALA 121 A SER 122 n 124 SER 122 A PRO 123 n 125 PRO 123 A ARG 124 n 126 ARG 124 A PHE 125 n 127 PHE 125 A LEU 126 n 128 LEU 126 A ASN 127 n 129 ASN 127 A ASP 128 n 130 ASP 128 A GLU 129 n 131 GLU 129 A ASP 130 n 132 ASP 130 A TYR 131 n 133 TYR 131 A HIS 132 n 134 HIS 132 A GLY 133 n 135 GLY 133 A GLY 134 n 136 GLY 134 A PHE 135 n 137 PHE 135 A GLU 136 n 138 GLU 136 A GLN 137 n 139 GLN 137 A GLY 138 n 140 GLY 138 A GLU 139 n 141 GLU 139 A ILE 140 n 142 ILE 140 A GLU 141 n 143 GLU 141 A LYS 142 n 144 LYS 142 A VAL 143 n 145 VAL 143 A PHE 144 n 146 PHE 144 A SER 145 n 147 SER 145 A ALA 146 n 148 ALA 146 A MET 147 n 149 MET 147 A GLU 148 n 150 GLU 148 A ALA 149 n 151 ALA 149 A ASN 150 n 152 ASN 150 A TYR 151 n 153 TYR 151 A GLU 152 n 154 GLU 152 A ALA 153 n 155 ALA 153 A TRP 154 n 156 TRP 154 A VAL 155 n 157 VAL 155 A ASN 156 n 158 ASN 156 A GLY 157 n 159 GLY 157 A PHE 158 n 160 PHE 158 A ALA 159 n 161 ALA 159 A PRO 160 n 162 PRO 160 A LEU 161 n 163 LEU 161 A ALA 162 n 164 ALA 162 A VAL 163 n 165 VAL 163 A GLY 164 n 166 GLY 164 A ALA 165 n 167 ALA 165 A ASP 166 n 168 ASP 166 A VAL 167 n 169 VAL 167 A PRO 168 n 170 PRO 168 A ALA 169 n 171 ALA 169 A ALA 170 n 172 ALA 170 A VAL 171 n 173 VAL 171 A ARG 172 n 174 ARG 172 A GLU 173 n 175 GLU 173 A PHE 174 n 176 PHE 174 A SER 175 n 177 SER 175 A ARG 176 n 178 ARG 176 A THR 177 n 179 THR 177 A LEU 178 n 180 LEU 178 A PHE 179 n 181 PHE 179 A ASN 180 n 182 ASN 180 A MET 181 n 183 MET 181 A ARG 182 n 184 ARG 182 A PRO 183 n 185 PRO 183 A ASP 184 n 186 ASP 184 A ILE 185 n 187 ILE 185 A THR 186 n 188 THR 186 A LEU 187 n 189 LEU 187 A PHE 188 n 190 PHE 188 A VAL 189 n 191 VAL 189 A SER 190 n 192 SER 190 A ARG 191 n 193 ARG 191 A THR 192 n 194 THR 192 A VAL 193 n 195 VAL 193 A PHE 194 n 196 PHE 194 A ASN 195 n 197 ASN 195 A SER 196 n 198 SER 196 A ASP 197 n 199 ASP 197 A MET 198 n 200 MET 198 A ARG 199 n 201 ARG 199 A GLY 200 n 202 GLY 200 A VAL 201 n 203 VAL 201 A LEU 202 n 204 LEU 202 A GLY 203 n 205 GLY 203 A LEU 204 n 206 LEU 204 A VAL 205 n 207 VAL 205 A LYS 206 n 208 LYS 206 A VAL 207 n 209 VAL 207 A PRO 208 n 210 PRO 208 A CYS 209 n 211 CYS 209 A HIS 210 n 212 HIS 210 A ILE 211 n 213 ILE 211 A PHE 212 n 214 PHE 212 A GLN 213 n 215 GLN 213 A THR 214 n 216 THR 214 A ALA 215 n 217 ALA 215 A ARG 216 n 218 ARG 216 A ASP 217 n 219 ASP 217 A HIS 218 n 220 HIS 218 A SER 219 n 221 SER 219 A VAL 220 n 222 VAL 220 A PRO 221 n 223 PRO 221 A ALA 222 n 224 ALA 222 A SER 223 n 225 SER 223 A VAL 224 n 226 VAL 224 A ALA 225 n 227 ALA 225 A THR 226 n 228 THR 226 A TYR 227 n 229 TYR 227 A LEU 228 n 230 LEU 228 A LYS 229 n 231 LYS 229 A ASN 230 n 232 ASN 230 A HIS 231 n 233 HIS 231 A LEU 232 n 234 LEU 232 A GLY 233 n 235 GLY 233 A GLY 234 n 236 GLY 234 A LYS 235 n 237 LYS 235 A ASN 236 n 238 ASN 236 A THR 237 n 239 THR 237 A VAL 238 n 240 VAL 238 A HIS 239 n 241 HIS 239 A TRP 240 n 242 TRP 240 A LEU 241 n 243 LEU 241 A ASN 242 n 244 ASN 242 A ILE 243 n 245 ILE 243 A GLU 244 n 246 GLU 244 A GLY 245 n 247 GLY 245 A HIS 246 n 248 HIS 246 A LEU 247 n 249 LEU 247 A PRO 248 n 250 PRO 248 A HIS 249 n 251 HIS 249 A LEU 250 n 252 LEU 250 A SER 251 n 253 SER 251 A ALA 252 n 254 ALA 252 A PRO 253 n 255 PRO 253 A THR 254 n 256 THR 254 A LEU 255 n 257 LEU 255 A LEU 256 n 258 LEU 256 A ALA 257 n 259 ALA 257 A GLN 258 n 260 GLN 258 A GLU 259 n 261 GLU 259 A LEU 260 n 262 LEU 260 A ARG 261 n 263 ARG 261 A ARG 262 n 264 ARG 262 A ALA 263 n 265 ALA 263 A LEU 264 n 266 LEU 264 A SER 265 n 267 SER 265 A n 268 266 A n 269 267 A 3.0324 -0.3950 0.2780 1.4501 -0.1872 1.2537 -0.1530 -0.2391 0.1327 0.0647 0.0455 -0.0938 -0.1377 0.0210 0.1076 0.1078 0.0304 -0.0818 0.0499 0.0010 0.0911 refined -44.5940 -43.4720 8.5130 X-RAY DIFFRACTION A 3 A 265 X-RAY DIFFRACTION 1 author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric gel filtration 1760 -17 22060 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_545 x,-y-1,-z crystal symmetry operation 0.0000000000 -129.2600000000 0.0000000000 A N VAL 14 A N VAL 16 A O VAL 47 A O VAL 49 A O VAL 48 A O VAL 50 A N LEU 21 A N LEU 23 A N VAL 22 A N VAL 24 A O ALA 91 A O ALA 93 A N TYR 92 A N TYR 94 A O ILE 117 A O ILE 119 A N LEU 118 A N LEU 120 A O PHE 212 A O PHE 214 A N ILE 211 A N ILE 213 A O THR 237 A O THR 239 1 A GLY -1 A GLY 1 1 Y 1 A GLY 0 A GLY 2 1 Y 1 A MET 1 A MET 3 1 Y 1 A GLY 2 A GLY 4 1 Y 1 A HIS 266 A HIS 268 1 Y 1 A ARG 267 A ARG 269 1 Y 1 A A SG S1 CYS DTV 89 301 2.02 1 A A SG S4 CYS DTV 89 301 2.08 1_555 4_545 1 A SER 96 63.28 -133.39 1 A LYS 115 -170.68 140.16 1 A ARG 124 -174.73 123.74 1 A ASN 150 -166.51 86.88 71.690 26.5934 8.000 0.9520 0.9280 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED 0.2106 0.1670 0.1692 2.1500 40.876 1006 18665 19671 5.1000 99.9100 0.2082 0.1658 1.000 0.500 0.8912 8.3320 0.1000 0.1778 0.1607 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1780 0.1610 0.8000 0.8000 1.4000 MAXIMUM LIKELIHOOD MASK 0.161 0.178 2.1500 40.876 182 2260 14 0 2064 0.016 0.022 2137 0.001 0.020 1440 1.491 1.955 2904 0.961 3.001 3474 5.921 5.000 264 30.147 22.500 100 15.762 15.000 332 20.005 15.000 19 0.107 0.200 328 0.006 0.021 2390 0.001 0.020 474 0.766 1.500 1310 0.207 1.500 533 1.471 2.000 2111 2.500 3.000 827 4.050 4.500 792 0.2150 0.1750 2.2060 79 1372 1451 20 100.0000 23.6 2.150 40.876 4DNP 19684 19684 0 0 0.126 0.126 1 20.100 21.700 100.000 0.458 2.150 2.270 7.7 62828 2848 0.458 1 22.100 100.000 0.352 2.270 2.400 9.7 59204 2692 0.352 1 22.000 100.000 0.265 2.400 2.570 12.3 55456 2521 0.265 1 22.000 100.000 0.200 2.570 2.780 15.5 51826 2367 0.200 1 21.900 100.000 0.142 2.780 3.040 20.8 47509 2181 0.142 1 21.800 100.000 0.115 3.040 3.400 27.2 43370 2005 0.115 1 21.600 100.000 0.098 3.400 3.930 32.9 36917 1732 0.098 1 21.300 100.000 0.077 3.930 4.810 36.6 30002 1497 0.077 1 20.000 100.000 0.080 4.810 6.800 35.4 25666 1170 0.080 1 21.900 100.000 0.056 6.800 40.876 40.4 14121 671 0.056 1 21.000 99.600 data reduction Andrew G.W. Leslie andrew@mrc-lmb.cam.ac.uk http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ MOSFLM package data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 2010/01/06 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.3.16 phasing Randy J. Read cimr-phaser@lists.cam.ac.uk Wed Jun 24 14:00:05 2009 http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program 2.1.4 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 data collection Blu-Ice Crystal Structure of DAD2 1 N N 2 N N 3 N N 4 N N This protein behaves as a monomer on gel filtration column A GLN 3 A GLN 5 HELX_P A LEU 9 A LEU 11 1 1 7 A ASP 30 A ASP 32 HELX_P A ASN 35 A ASN 37 5 2 6 A ILE 37 A ILE 39 HELX_P A LEU 42 A LEU 44 5 3 6 A ASN 59 A ASN 61 HELX_P A PHE 63 A PHE 65 5 4 5 A LEU 71 A LEU 73 HELX_P A LEU 85 A LEU 87 1 5 15 A SER 96 A SER 98 HELX_P A ARG 109 A ARG 111 1 6 14 A GLU 136 A GLU 138 HELX_P A ASN 150 A ASN 152 1 7 15 A ASN 150 A ASN 152 HELX_P A GLY 164 A GLY 166 1 8 15 A VAL 167 A VAL 169 HELX_P A MET 181 A MET 183 1 9 15 A ARG 182 A ARG 184 HELX_P A ASN 195 A ASN 197 1 10 14 A MET 198 A MET 200 HELX_P A VAL 205 A VAL 207 5 11 8 A PRO 221 A PRO 223 HELX_P A LEU 232 A LEU 234 1 12 12 A LEU 247 A LEU 249 HELX_P A ALA 252 A ALA 254 1 13 6 A ALA 252 A ALA 254 HELX_P A SER 265 A SER 267 1 14 14 HYDROLASE alpha/beta hydrolase, HYDROLASE 4DNP PDB 1 4DNP -1 267 4DNP -1 267 4DNP A 1 1 269 7 anti-parallel parallel parallel parallel parallel parallel A ARG 12 A ARG 14 A VAL 14 A VAL 16 A ARG 46 A ARG 48 A TYR 50 A TYR 52 A VAL 20 A VAL 22 A ALA 24 A ALA 26 A CYS 90 A CYS 92 A HIS 95 A HIS 97 A PHE 113 A PHE 115 A ILE 119 A ILE 121 A CYS 209 A CYS 211 A ALA 215 A ALA 217 A ASN 236 A ASN 238 A GLU 244 A GLU 246 BINDING SITE FOR RESIDUE DTV A 301 A DTV 301 Software 2 BINDING SITE FOR RESIDUE GOL A 302 A GOL 302 Software 6 A CYS 89 A CYS 91 2 1_555 A CYS 89 A CYS 91 2 4_545 A SER 96 A SER 98 6 1_555 A VAL 97 A VAL 99 6 1_555 A PHE 125 A PHE 127 6 1_555 A HIS 246 A HIS 248 6 1_555 A HOH 580 D HOH 6 1_555 A HOH 582 D HOH 6 1_555 197 I 2 3