0.031335
0.000000
0.000000
0.000000
0.021623
0.000000
0.000000
0.000000
0.018994
0.00000
0.00000
0.00000
Kachalova, G.S.
Shosheva, A.H.
Bourenkov, G.P.
Donchev, A.A.
Dimitrov, M.I.
Bartunik, H.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
31.913
46.246
52.648
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 1
63.546
COPPER (I) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
O
N
21
N
N
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
C
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
CU
N
48
N
N
N
49
R
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
S
N
54
N
O
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
N
N
63
S
C
N
64
N
C
N
65
N
O
N
66
N
C
N
67
N
C
N
68
N
C
N
69
N
O
N
70
N
N
N
71
N
O
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
N
C
N
103
N
C
N
104
N
O
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
N
N
126
S
C
N
127
N
C
N
128
N
O
N
129
N
C
Y
130
N
C
Y
131
N
N
Y
132
N
C
Y
133
N
C
Y
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
S
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
N
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
N
C
N
223
N
C
N
224
N
S
N
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
Y
247
N
C
Y
248
N
C
N
249
N
O
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
O
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
R
C
N
297
N
O
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
N
320
N
O
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
C
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
US
J.Inorg.Biochem.
JIBIDJ
0525
0162-0134
115
174
181
10.1016/j.jinorgbio.2012.07.015
22883960
Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
2012
10.2210/pdb4dp6/pdb
pdb_00004dp6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2002-03-07
MAR CCD 165 mm
double crystal Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.05
1.0
BW6
MPG/DESY, HAMBURG
1.05
SYNCHROTRON
MPG/DESY, HAMBURG BEAMLINE BW6
10474.645
Plastocyanin B, chloroplastic
UNP residues 70-168
1
nat
polymer
63.546
COPPER (I) ION
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
114
nat
water
no
no
VDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEY
TFYCSPHQGAGMVGKVIVN
VDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEY
TFYCSPHQGAGMVGKVIVN
X
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lombardy poplar
sample
3691
chloroplast
Populus nigra
cv. Italica
leaf
1
1.85
33.67
VAPOR DIFFUSION, HANGING DROP
8.0
2.6 M ammonium sulfate, 0.1 M sodium acetate buffer, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-02-13
1
1
2017-11-15
1
2
2023-09-13
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The crystal structure of the plastocyanin A
The 1.5 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin B at pH 4.0
The 1.35 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 4.0
The 1.8 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin B at pH 6.0
The 1.54 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 6.0
The 1.88 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin B at pH 8.0
The 1.08 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin A at pH 4.0
The 1.07 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 4.0
The 1.00 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin A at pH 6.0
The 1.05 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 6.0
The 1.00 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin A at pH 8.0
The 1.06 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 8.0
RCSB
Y
RCSB
2012-02-13
REL
REL
CU1
COPPER (I) ION
GOL
GLYCEROL
HOH
water
1PLC
PDB ENTRY 1PLC
PDB
experimental model
CU1
100
2
CU1
CU1
100
X
GOL
101
3
GOL
GOL
101
X
HOH
201
4
HOH
HOH
201
X
HOH
203
4
HOH
HOH
202
X
HOH
204
4
HOH
HOH
203
X
HOH
206
4
HOH
HOH
204
X
HOH
207
4
HOH
HOH
205
X
HOH
208
4
HOH
HOH
206
X
HOH
209
4
HOH
HOH
207
X
HOH
210
4
HOH
HOH
208
X
HOH
211
4
HOH
HOH
209
X
HOH
212
4
HOH
HOH
210
X
HOH
214
4
HOH
HOH
211
X
HOH
216
4
HOH
HOH
212
X
HOH
217
4
HOH
HOH
213
X
HOH
218
4
HOH
HOH
214
X
HOH
219
4
HOH
HOH
215
X
HOH
220
4
HOH
HOH
216
X
HOH
222
4
HOH
HOH
217
X
HOH
223
4
HOH
HOH
218
X
HOH
225
4
HOH
HOH
219
X
HOH
227
4
HOH
HOH
220
X
HOH
229
4
HOH
HOH
221
X
HOH
230
4
HOH
HOH
222
X
HOH
231
4
HOH
HOH
223
X
HOH
232
4
HOH
HOH
224
X
HOH
233
4
HOH
HOH
225
X
HOH
234
4
HOH
HOH
226
X
HOH
235
4
HOH
HOH
227
X
HOH
236
4
HOH
HOH
228
X
HOH
238
4
HOH
HOH
229
X
HOH
239
4
HOH
HOH
230
X
HOH
240
4
HOH
HOH
231
X
HOH
241
4
HOH
HOH
232
X
HOH
242
4
HOH
HOH
233
X
HOH
243
4
HOH
HOH
234
X
HOH
244
4
HOH
HOH
235
X
HOH
245
4
HOH
HOH
236
X
HOH
246
4
HOH
HOH
237
X
HOH
247
4
HOH
HOH
238
X
HOH
248
4
HOH
HOH
239
X
HOH
249
4
HOH
HOH
240
X
HOH
250
4
HOH
HOH
241
X
HOH
251
4
HOH
HOH
242
X
HOH
252
4
HOH
HOH
243
X
HOH
253
4
HOH
HOH
244
X
HOH
254
4
HOH
HOH
245
X
HOH
256
4
HOH
HOH
246
X
HOH
257
4
HOH
HOH
247
X
HOH
258
4
HOH
HOH
248
X
HOH
259
4
HOH
HOH
249
X
HOH
260
4
HOH
HOH
250
X
HOH
261
4
HOH
HOH
251
X
HOH
263
4
HOH
HOH
252
X
HOH
264
4
HOH
HOH
253
X
HOH
266
4
HOH
HOH
254
X
HOH
267
4
HOH
HOH
255
X
HOH
268
4
HOH
HOH
256
X
HOH
270
4
HOH
HOH
257
X
HOH
271
4
HOH
HOH
258
X
HOH
273
4
HOH
HOH
259
X
HOH
274
4
HOH
HOH
260
X
HOH
275
4
HOH
HOH
261
X
HOH
278
4
HOH
HOH
262
X
HOH
279
4
HOH
HOH
263
X
HOH
280
4
HOH
HOH
264
X
HOH
281
4
HOH
HOH
265
X
HOH
282
4
HOH
HOH
266
X
HOH
285
4
HOH
HOH
267
X
HOH
286
4
HOH
HOH
268
X
HOH
287
4
HOH
HOH
269
X
HOH
288
4
HOH
HOH
270
X
HOH
292
4
HOH
HOH
271
X
HOH
293
4
HOH
HOH
272
X
HOH
294
4
HOH
HOH
273
X
HOH
295
4
HOH
HOH
274
X
HOH
296
4
HOH
HOH
275
X
HOH
297
4
HOH
HOH
276
X
HOH
298
4
HOH
HOH
277
X
HOH
299
4
HOH
HOH
278
X
HOH
300
4
HOH
HOH
279
X
HOH
301
4
HOH
HOH
280
X
HOH
303
4
HOH
HOH
281
X
HOH
304
4
HOH
HOH
282
X
HOH
305
4
HOH
HOH
283
X
HOH
307
4
HOH
HOH
284
X
HOH
308
4
HOH
HOH
285
X
HOH
309
4
HOH
HOH
286
X
HOH
310
4
HOH
HOH
287
X
HOH
313
4
HOH
HOH
288
X
HOH
314
4
HOH
HOH
289
X
HOH
315
4
HOH
HOH
290
X
HOH
316
4
HOH
HOH
291
X
HOH
323
4
HOH
HOH
292
X
HOH
328
4
HOH
HOH
293
X
HOH
330
4
HOH
HOH
294
X
HOH
344
4
HOH
HOH
295
X
HOH
345
4
HOH
HOH
296
X
HOH
346
4
HOH
HOH
297
X
HOH
347
4
HOH
HOH
298
X
HOH
348
4
HOH
HOH
299
X
HOH
349
4
HOH
HOH
300
X
HOH
351
4
HOH
HOH
301
X
HOH
355
4
HOH
HOH
302
X
HOH
356
4
HOH
HOH
303
X
HOH
358
4
HOH
HOH
304
X
HOH
359
4
HOH
HOH
305
X
HOH
360
4
HOH
HOH
306
X
HOH
362
4
HOH
HOH
307
X
HOH
363
4
HOH
HOH
308
X
HOH
364
4
HOH
HOH
309
X
HOH
365
4
HOH
HOH
310
X
HOH
366
4
HOH
HOH
311
X
HOH
367
4
HOH
HOH
312
X
HOH
368
4
HOH
HOH
313
X
HOH
371
4
HOH
HOH
314
X
VAL
1
n
1
VAL
1
X
ASP
2
n
2
ASP
2
X
VAL
3
n
3
VAL
3
X
LEU
4
n
4
LEU
4
X
LEU
5
n
5
LEU
5
X
GLY
6
n
6
GLY
6
X
ALA
7
n
7
ALA
7
X
ASP
8
n
8
ASP
8
X
ASP
9
n
9
ASP
9
X
GLY
10
n
10
GLY
10
X
SER
11
n
11
SER
11
X
LEU
12
n
12
LEU
12
X
ALA
13
n
13
ALA
13
X
PHE
14
n
14
PHE
14
X
VAL
15
n
15
VAL
15
X
PRO
16
n
16
PRO
16
X
SER
17
n
17
SER
17
X
GLU
18
n
18
GLU
18
X
PHE
19
n
19
PHE
19
X
SER
20
n
20
SER
20
X
VAL
21
n
21
VAL
21
X
PRO
22
n
22
PRO
22
X
ALA
23
n
23
ALA
23
X
GLY
24
n
24
GLY
24
X
GLU
25
n
25
GLU
25
X
LYS
26
n
26
LYS
26
X
ILE
27
n
27
ILE
27
X
VAL
28
n
28
VAL
28
X
PHE
29
n
29
PHE
29
X
LYS
30
n
30
LYS
30
X
ASN
31
n
31
ASN
31
X
ASN
32
n
32
ASN
32
X
ALA
33
n
33
ALA
33
X
GLY
34
n
34
GLY
34
X
PHE
35
n
35
PHE
35
X
PRO
36
n
36
PRO
36
X
HIS
37
n
37
HIS
37
X
ASN
38
n
38
ASN
38
X
VAL
39
n
39
VAL
39
X
LEU
40
n
40
LEU
40
X
PHE
41
n
41
PHE
41
X
ASP
42
n
42
ASP
42
X
GLU
43
n
43
GLU
43
X
ASP
44
n
44
ASP
44
X
ALA
45
n
45
ALA
45
X
VAL
46
n
46
VAL
46
X
PRO
47
n
47
PRO
47
X
SER
48
n
48
SER
48
X
GLY
49
n
49
GLY
49
X
VAL
50
n
50
VAL
50
X
ASP
51
n
51
ASP
51
X
VAL
52
n
52
VAL
52
X
SER
53
n
53
SER
53
X
LYS
54
n
54
LYS
54
X
ILE
55
n
55
ILE
55
X
SER
56
n
56
SER
56
X
MET
57
n
57
MET
57
X
SER
58
n
58
SER
58
X
GLU
59
n
59
GLU
59
X
GLU
60
n
60
GLU
60
X
ASP
61
n
61
ASP
61
X
LEU
62
n
62
LEU
62
X
LEU
63
n
63
LEU
63
X
ASN
64
n
64
ASN
64
X
ALA
65
n
65
ALA
65
X
LYS
66
n
66
LYS
66
X
GLY
67
n
67
GLY
67
X
GLU
68
n
68
GLU
68
X
THR
69
n
69
THR
69
X
PHE
70
n
70
PHE
70
X
GLU
71
n
71
GLU
71
X
VAL
72
n
72
VAL
72
X
ALA
73
n
73
ALA
73
X
LEU
74
n
74
LEU
74
X
SER
75
n
75
SER
75
X
ASP
76
n
76
ASP
76
X
LYS
77
n
77
LYS
77
X
GLY
78
n
78
GLY
78
X
GLU
79
n
79
GLU
79
X
TYR
80
n
80
TYR
80
X
THR
81
n
81
THR
81
X
PHE
82
n
82
PHE
82
X
TYR
83
n
83
TYR
83
X
CYS
84
n
84
CYS
84
X
SER
85
n
85
SER
85
X
PRO
86
n
86
PRO
86
X
HIS
87
n
87
HIS
87
X
GLN
88
n
88
GLN
88
X
GLY
89
n
89
GLY
89
X
ALA
90
n
90
ALA
90
X
GLY
91
n
91
GLY
91
X
MET
92
n
92
MET
92
X
VAL
93
n
93
VAL
93
X
GLY
94
n
94
GLY
94
X
LYS
95
n
95
LYS
95
X
VAL
96
n
96
VAL
96
X
ILE
97
n
97
ILE
97
X
VAL
98
n
98
VAL
98
X
ASN
99
n
99
ASN
99
X
author_and_software_defined_assembly
PISA
1
monomeric
X
HIS
37
A
ND1
HIS
37
1_555
X
CU1
100
B
CU
CU1
1_555
X
CYS
84
A
SG
CYS
84
1_555
132.7
X
HIS
37
A
ND1
HIS
37
1_555
X
CU1
100
B
CU
CU1
1_555
X
HIS
87
A
ND1
HIS
87
1_555
98.8
X
CYS
84
A
SG
CYS
84
1_555
X
CU1
100
B
CU
CU1
1_555
X
HIS
87
A
ND1
HIS
87
1_555
120.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
X
O
VAL
15
A
O
VAL
15
X
N
LEU
4
A
N
LEU
4
X
N
VAL
3
A
N
VAL
3
X
O
LYS
30
A
O
LYS
30
X
N
ILE
27
A
N
ILE
27
X
O
VAL
72
A
O
VAL
72
X
N
VAL
21
A
N
VAL
21
X
O
ILE
97
A
O
ILE
97
X
O
VAL
96
A
O
VAL
96
X
N
TYR
80
A
N
TYR
80
X
O
TYR
83
A
O
TYR
83
X
N
LEU
40
A
N
LEU
40
1
X
X
O
O
HOH
HOH
255
256
2.08
1
X
X
O
O
HOH
HOH
254
300
2.14
1
X
X
OE1
OE2
GLU
GLU
68
79
2.14
1_555
1_655
1
X
ASN
32
-121.45
-56.73
1
X
PHE
35
-34.31
165.29
1
X
ALA
45
-143.14
47.98
22.819
-1.88
0.00
-0.00
-0.37
-0.00
2.25
0.968
0.926
0.25704
0.17361
0.17739
1.67
14.74
446
8827
4.8
97.95
3.082
0.097
RANDOM
1
ISOTROPIC
THROUGHOUT
MOLECULAR REPLACEMENT
0.122
0.139
0.80
0.80
1.40
PDB ENTRY 1PLC
MAXIMUM LIKELIHOOD
MASK
1.67
14.74
114
858
7
0
737
0.020
0.020
786
2.194
1.974
1070
6.586
5.000
104
32.194
26.944
36
16.469
15.000
125
0.160
0.200
121
0.012
0.021
609
12.225
5.000
1
0.414
0.281
1.715
23
503
803
20
85.53
18.33
1.67
14.74
4DP6
9392
9298
2.0
0.068
1
18.4
3.5
98.8
0.385
1.67
1.72
2.4
467
1
3.4
99.1
data collection
MAR345
phasing
MOLREP
refinement
REFMAC
5.6.0117
data reduction
DENZO
data scaling
SCALEPACK
The 1.67 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 8.0
1
N
N
2
N
N
3
N
N
4
N
N
X
ASP
51
A
ASP
51
HELX_P
X
SER
56
A
SER
56
5
1
6
X
HIS
87
A
HIS
87
HELX_P
X
GLY
91
A
GLY
91
5
2
5
metalc
2.044
X
HIS
37
A
ND1
HIS
37
1_555
X
CU1
100
B
CU
CU1
1_555
metalc
2.201
X
CYS
84
A
SG
CYS
84
1_555
X
CU1
100
B
CU
CU1
1_555
metalc
2.206
X
HIS
87
A
ND1
HIS
87
1_555
X
CU1
100
B
CU
CU1
1_555
ELECTRON TRANSPORT
membrane, thylakoid, transit peptide, plastocyanin-like domain, copper-binding, ELECTRON TRANSPORT
X
VAL
15
A
VAL
15
1
X
PRO
16
A
PRO
16
1.25
X
PHE
35
A
PHE
35
1
X
PRO
36
A
PRO
36
-2.83
PLAS2_POPNI
UNP
1
70
P11970
VDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEY
TFYCSPHQGAGMVGKVIVN
70
168
4DP6
1
99
P11970
X
1
1
99
4
4
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
X
PHE
14
A
PHE
14
X
VAL
15
A
VAL
15
X
ASP
2
A
ASP
2
X
LEU
5
A
LEU
5
X
LYS
26
A
LYS
26
X
ASN
31
A
ASN
31
X
THR
69
A
THR
69
X
ALA
73
A
ALA
73
X
GLU
18
A
GLU
18
X
PRO
22
A
PRO
22
X
VAL
93
A
VAL
93
X
ASN
99
A
ASN
99
X
GLY
78
A
GLY
78
X
TYR
83
A
TYR
83
X
LEU
40
A
LEU
40
X
PHE
41
A
PHE
41
BINDING SITE FOR RESIDUE CU1 X 100
X
CU1
100
Software
5
BINDING SITE FOR RESIDUE GOL X 101
X
GOL
101
Software
9
X
PRO
36
A
PRO
36
5
1_555
X
HIS
37
A
HIS
37
5
1_555
X
CYS
84
A
CYS
84
5
1_555
X
HIS
87
A
HIS
87
5
1_555
X
MET
92
A
MET
92
5
1_555
X
PRO
16
A
PRO
16
9
4_547
X
SER
17
A
SER
17
9
4_547
X
GLU
18
A
GLU
18
9
4_547
X
ASP
51
A
ASP
51
9
3_546
X
LYS
54
A
LYS
54
9
3_546
X
HIS
87
A
HIS
87
9
1_555
X
HOH
221
D
HOH
9
4_547
X
HOH
223
D
HOH
9
3_546
X
HOH
227
D
HOH
9
1_555
19
P 21 21 21