0.011535
0.000000
0.000000
0.000000
0.010714
0.000000
0.000000
0.000000
0.009402
0.00000
0.00000
0.00000
Gan, J.H.
Abdur, R.
Liu, H.H.
Sheng, J.
Caton-Willians, J.
Soares, A.S.
Huang, Z.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
86.692
93.339
106.363
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
H2 O7 P2 -2
175.959
PYROPHOSPHATE 2-
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
O
N
90
N
P
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
C
N
95
R
C
N
96
N
O
N
97
S
C
N
98
N
O
N
99
N
C
N
100
R
C
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
Y
105
N
C
N
106
N
N
Y
107
N
N
Y
108
N
C
Y
109
N
N
Y
110
N
C
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
O
N
126
N
P
N
127
N
O
N
128
N
O
N
129
N
O
N
130
N
C
N
131
R
C
N
132
N
O
N
133
S
C
N
134
N
O
N
135
N
C
N
136
R
C
N
137
N
N
N
138
N
C
N
139
N
O
N
140
N
N
N
141
N
C
N
142
N
N
N
143
N
C
N
144
N
C
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
P
N
161
N
O
N
162
N
O
N
163
N
O
N
164
N
C
N
165
R
C
N
166
N
O
N
167
S
C
N
168
N
O
N
169
N
C
N
170
R
C
Y
171
N
N
Y
172
N
C
Y
173
N
N
Y
174
N
C
N
175
N
C
N
176
N
O
N
177
N
N
N
178
N
C
N
179
N
N
N
180
N
N
Y
181
N
C
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
P
N
198
N
O
N
199
N
O
N
200
N
O
N
201
N
C
N
202
R
C
N
203
N
O
N
204
S
C
N
205
N
O
N
206
N
C
N
207
R
C
N
208
N
N
N
209
N
C
N
210
N
O
N
211
N
N
N
212
N
C
N
213
N
O
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
N
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
N
C
N
273
N
C
N
274
N
O
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
N
Y
288
N
C
Y
289
N
C
Y
290
N
N
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
S
C
N
310
N
C
N
311
N
C
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
N
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
N
379
N
C
N
380
N
S
N
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
P
N
418
N
O
N
419
N
O
N
420
N
O
N
421
N
O
N
422
N
P
N
423
N
O
N
424
N
O
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
N
C
N
433
N
C
N
434
N
C
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
N
N
446
S
C
N
447
N
C
N
448
N
O
N
449
N
C
N
450
N
O
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
N
N
460
S
C
N
461
N
C
N
462
N
O
N
463
R
C
N
464
N
O
N
465
N
C
N
466
N
O
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
N
N
477
S
C
N
478
N
C
N
479
N
O
N
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
Y
484
N
N
Y
485
N
C
Y
486
N
C
Y
487
N
C
Y
488
N
C
Y
489
N
C
N
490
N
O
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
N
N
504
S
C
N
505
N
C
N
506
N
O
N
507
N
C
Y
508
N
C
Y
509
N
C
Y
510
N
C
Y
511
N
C
Y
512
N
C
Y
513
N
C
N
514
N
O
N
515
N
O
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
N
N
528
S
C
N
529
N
C
N
530
N
O
N
531
N
C
N
532
N
C
N
533
N
C
N
534
N
O
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
doub
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
doub
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
doub
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
Y
476
N
doub
Y
477
N
sing
Y
478
N
sing
N
479
N
sing
Y
480
N
doub
Y
481
N
sing
Y
482
N
sing
N
483
N
sing
Y
484
N
sing
Y
485
N
doub
N
486
N
sing
Y
487
N
doub
N
488
N
sing
Y
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
doub
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
Y
504
N
doub
Y
505
N
sing
Y
506
N
sing
N
507
N
sing
Y
508
N
doub
N
509
N
sing
Y
510
N
doub
N
511
N
sing
Y
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
doub
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
To be Published
0353
Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase
10.2210/pdb4dsk/pdb
pdb_00004dsk
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2011-06-27
ADSC QUANTUM 4
mirror
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
X12B
NSLS
1.0000
SYNCHROTRON
NSLS BEAMLINE X12B
4305.805
DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*CP*G)-3')
1
syn
polymer
5163.348
DNA (5'-D(*TP*CP*AP*CP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3')
1
syn
polymer
66101.766
DNA polymerase
2.7.7.7
RESIDUES 298-876
A598D
1
man
polymer
40.078
CALCIUM ION
4
syn
non-polymer
175.959
PYROPHOSPHATE 2-
1
syn
non-polymer
18.015
water
300
nat
water
no
no
(DG)(DG)(DC)(DT)(DA)(DC)(DA)(DG)(DG)(DA)(DC)(DT)(DC)(DG)
GGCTACAGGACTCG
B
polydeoxyribonucleotide
no
no
(DT)(DC)(DA)(DC)(DG)(DA)(DG)(DT)(DC)(DC)(DT)(DG)(DT)(DA)(DG)(DC)(DC)
TCACGAGTCCTGTAGCC
C
polydeoxyribonucleotide
no
no
KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA
VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL
ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI
LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLS
STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV
TPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT
SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT
LRVPLKVDYHYGSTWYDAK
KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA
VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL
ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI
LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLS
STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV
TPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT
SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT
LRVPLKVDYHYGSTWYDAK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
DPO1
1422
Geobacillus stearothermophilus
562
Escherichia coli
BL21 (DE3)
Plasmid
pET28
1
2.85
56.80
VAPOR DIFFUSION, SITTING DROP
6.5
0.2 M calcium acetate, 0.1 M sodium cacodylate (pH 6.5), 18% v/v PEG8000, VAPOR DIFFUSION, SITTING DROP
-8.092
B
5
C
13
5.185
B_DA5:DT13_C
1
-5.206
-0.189
0.099
0.211
-0.699
1
19
B
6
C
12
-5.754
B_DC6:DG12_C
2
-6.388
-0.037
-0.156
0.038
0.266
1
20
B
7
C
11
-0.836
B_DA7:DT11_C
3
-6.837
0.233
-0.235
-0.351
3.158
1
19
B
8
C
10
0.920
B_DG8:DC10_C
4
-11.221
0.265
0.089
-0.110
-5.060
1
19
B
9
C
9
-5.668
B_DG9:DC9_C
5
-13.812
-0.051
-0.457
-0.066
-9.707
1
20
B
10
C
8
-3.094
B_DA10:DT8_C
6
-10.460
0.201
0.006
-0.047
-0.327
1
19
B
11
C
7
-1.468
B_DC11:DG7_C
7
-5.616
0.331
-0.144
-0.204
11.853
1
20
B
12
C
6
4.954
B_DT12:DA6_C
8
-10.352
-0.094
-0.164
-0.196
12.184
1
19
B
13
C
5
2.718
B_DC13:DG5_C
9
-10.363
0.323
-0.214
-0.163
8.022
1
19
B
14
C
4
5.179
B_DG14:DC4_C
10
-7.458
0.013
0.031
-0.174
3.105
32.849
B
B
5
6
1.338
C
C
13
12
3.136
0.756
-0.388
-0.251
BB_DA5DC6:DG12DT13_CC
1
1.748
-3.092
32.795
-0.567
0.972
3.370
37.098
B
B
6
7
12.577
C
C
12
11
3.341
7.944
-0.684
0.501
BB_DC6DA7:DT11DG12_CC
2
0.131
-0.207
36.266
-0.316
1.093
3.168
35.521
B
B
7
8
-0.412
C
C
11
10
3.195
-0.251
-0.022
0.201
BB_DA7DG8:DC10DT11_CC
3
-4.902
8.059
35.191
0.365
-0.664
3.427
32.808
B
B
8
9
15.903
C
C
10
9
3.628
8.840
0.140
-0.190
BB_DG8DG9:DC9DC10_CC
4
5.184
-9.326
31.208
-2.017
0.738
3.111
36.674
B
B
9
10
3.252
C
C
9
8
3.206
2.039
0.335
-0.328
BB_DG9DA10:DT8DC9_CC
5
-5.048
8.050
36.282
-0.792
-1.203
3.195
33.027
B
B
10
11
2.644
C
C
8
7
3.182
1.500
0.696
-0.746
BB_DA10DC11:DG7DT8_CC
6
2.994
-5.275
32.862
-1.560
-0.729
2.445
32.537
B
B
11
12
19.505
C
C
7
6
3.114
10.729
0.232
-1.512
BB_DC11DT12:DA6DG7_CC
7
-1.735
3.154
30.715
-4.339
-0.679
2.598
27.316
B
B
12
13
23.156
C
C
6
5
3.471
10.655
-0.384
-1.594
BB_DT12DC13:DG5DA6_CC
8
-0.326
0.709
25.186
-5.939
0.735
2.718
33.265
B
B
13
14
23.915
C
C
5
4
3.530
13.312
-0.507
-1.431
BB_DC13DG14:DC4DG5_CC
9
-2.604
4.677
30.445
-4.724
0.451
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-03-27
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus V713P mutant bound to G:dCTP
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus wuth duplex DNA, Se-dGTP and Calcium
DNA polymerase I from Bacillus stearothermophilus wuth duplex DNA, dGTP and Calcium
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium
RCSB
Y
RCSB
2012-02-19
REL
REL
CA
CALCIUM ION
POP
PYROPHOSPHATE 2-
HOH
water
Synthesized DNA
sample
Synthesized DNA
sample
3HT3
PDB
experimental model
CA
2
4
CA
CA
101
B
POP
1001
5
POP
POP
1001
A
CA
1
4
CA
CA
1002
A
CA
3
4
CA
CA
1003
A
CA
4
4
CA
CA
1004
A
HOH
1
6
HOH
HOH
201
B
HOH
94
6
HOH
HOH
202
B
HOH
161
6
HOH
HOH
203
B
HOH
186
6
HOH
HOH
204
B
HOH
201
6
HOH
HOH
205
B
HOH
235
6
HOH
HOH
206
B
HOH
330
6
HOH
HOH
207
B
HOH
342
6
HOH
HOH
208
B
HOH
343
6
HOH
HOH
209
B
HOH
344
6
HOH
HOH
210
B
HOH
345
6
HOH
HOH
211
B
HOH
346
6
HOH
HOH
212
B
HOH
351
6
HOH
HOH
213
B
HOH
352
6
HOH
HOH
214
B
HOH
353
6
HOH
HOH
215
B
HOH
26
6
HOH
HOH
101
C
HOH
58
6
HOH
HOH
102
C
HOH
87
6
HOH
HOH
103
C
HOH
138
6
HOH
HOH
104
C
HOH
148
6
HOH
HOH
105
C
HOH
233
6
HOH
HOH
106
C
HOH
241
6
HOH
HOH
107
C
HOH
347
6
HOH
HOH
108
C
HOH
348
6
HOH
HOH
109
C
HOH
349
6
HOH
HOH
110
C
HOH
356
6
HOH
HOH
111
C
HOH
358
6
HOH
HOH
112
C
HOH
198
6
HOH
HOH
1101
A
HOH
202
6
HOH
HOH
1102
A
HOH
2
6
HOH
HOH
1103
A
HOH
3
6
HOH
HOH
1104
A
HOH
4
6
HOH
HOH
1105
A
HOH
5
6
HOH
HOH
1106
A
HOH
6
6
HOH
HOH
1107
A
HOH
7
6
HOH
HOH
1108
A
HOH
8
6
HOH
HOH
1109
A
HOH
9
6
HOH
HOH
1110
A
HOH
10
6
HOH
HOH
1111
A
HOH
11
6
HOH
HOH
1112
A
HOH
12
6
HOH
HOH
1113
A
HOH
13
6
HOH
HOH
1114
A
HOH
14
6
HOH
HOH
1115
A
HOH
15
6
HOH
HOH
1116
A
HOH
16
6
HOH
HOH
1117
A
HOH
17
6
HOH
HOH
1118
A
HOH
18
6
HOH
HOH
1119
A
HOH
19
6
HOH
HOH
1120
A
HOH
20
6
HOH
HOH
1121
A
HOH
21
6
HOH
HOH
1122
A
HOH
22
6
HOH
HOH
1123
A
HOH
23
6
HOH
HOH
1124
A
HOH
24
6
HOH
HOH
1125
A
HOH
25
6
HOH
HOH
1126
A
HOH
27
6
HOH
HOH
1127
A
HOH
28
6
HOH
HOH
1128
A
HOH
29
6
HOH
HOH
1129
A
HOH
30
6
HOH
HOH
1130
A
HOH
31
6
HOH
HOH
1131
A
HOH
32
6
HOH
HOH
1132
A
HOH
33
6
HOH
HOH
1133
A
HOH
34
6
HOH
HOH
1134
A
HOH
35
6
HOH
HOH
1135
A
HOH
36
6
HOH
HOH
1136
A
HOH
37
6
HOH
HOH
1137
A
HOH
38
6
HOH
HOH
1138
A
HOH
39
6
HOH
HOH
1139
A
HOH
40
6
HOH
HOH
1140
A
HOH
41
6
HOH
HOH
1141
A
HOH
42
6
HOH
HOH
1142
A
HOH
43
6
HOH
HOH
1143
A
HOH
44
6
HOH
HOH
1144
A
HOH
45
6
HOH
HOH
1145
A
HOH
46
6
HOH
HOH
1146
A
HOH
47
6
HOH
HOH
1147
A
HOH
48
6
HOH
HOH
1148
A
HOH
49
6
HOH
HOH
1149
A
HOH
50
6
HOH
HOH
1150
A
HOH
51
6
HOH
HOH
1151
A
HOH
52
6
HOH
HOH
1152
A
HOH
53
6
HOH
HOH
1153
A
HOH
54
6
HOH
HOH
1154
A
HOH
55
6
HOH
HOH
1155
A
HOH
56
6
HOH
HOH
1156
A
HOH
57
6
HOH
HOH
1157
A
HOH
59
6
HOH
HOH
1158
A
HOH
60
6
HOH
HOH
1159
A
HOH
61
6
HOH
HOH
1160
A
HOH
62
6
HOH
HOH
1161
A
HOH
63
6
HOH
HOH
1162
A
HOH
64
6
HOH
HOH
1163
A
HOH
65
6
HOH
HOH
1164
A
HOH
66
6
HOH
HOH
1165
A
HOH
67
6
HOH
HOH
1166
A
HOH
68
6
HOH
HOH
1167
A
HOH
69
6
HOH
HOH
1168
A
HOH
70
6
HOH
HOH
1169
A
HOH
71
6
HOH
HOH
1170
A
HOH
72
6
HOH
HOH
1171
A
HOH
73
6
HOH
HOH
1172
A
HOH
74
6
HOH
HOH
1173
A
HOH
75
6
HOH
HOH
1174
A
HOH
76
6
HOH
HOH
1175
A
HOH
77
6
HOH
HOH
1176
A
HOH
78
6
HOH
HOH
1177
A
HOH
79
6
HOH
HOH
1178
A
HOH
80
6
HOH
HOH
1179
A
HOH
81
6
HOH
HOH
1180
A
HOH
82
6
HOH
HOH
1181
A
HOH
83
6
HOH
HOH
1182
A
HOH
84
6
HOH
HOH
1183
A
HOH
85
6
HOH
HOH
1184
A
HOH
86
6
HOH
HOH
1185
A
HOH
88
6
HOH
HOH
1186
A
HOH
89
6
HOH
HOH
1187
A
HOH
90
6
HOH
HOH
1188
A
HOH
91
6
HOH
HOH
1189
A
HOH
92
6
HOH
HOH
1190
A
HOH
93
6
HOH
HOH
1191
A
HOH
95
6
HOH
HOH
1192
A
HOH
96
6
HOH
HOH
1193
A
HOH
97
6
HOH
HOH
1194
A
HOH
98
6
HOH
HOH
1195
A
HOH
99
6
HOH
HOH
1196
A
HOH
100
6
HOH
HOH
1197
A
HOH
123
6
HOH
HOH
1198
A
HOH
124
6
HOH
HOH
1199
A
HOH
125
6
HOH
HOH
1200
A
HOH
127
6
HOH
HOH
1201
A
HOH
128
6
HOH
HOH
1202
A
HOH
130
6
HOH
HOH
1203
A
HOH
131
6
HOH
HOH
1204
A
HOH
134
6
HOH
HOH
1205
A
HOH
135
6
HOH
HOH
1206
A
HOH
136
6
HOH
HOH
1207
A
HOH
137
6
HOH
HOH
1208
A
HOH
139
6
HOH
HOH
1209
A
HOH
140
6
HOH
HOH
1210
A
HOH
141
6
HOH
HOH
1211
A
HOH
143
6
HOH
HOH
1212
A
HOH
145
6
HOH
HOH
1213
A
HOH
146
6
HOH
HOH
1214
A
HOH
147
6
HOH
HOH
1215
A
HOH
149
6
HOH
HOH
1216
A
HOH
151
6
HOH
HOH
1217
A
HOH
154
6
HOH
HOH
1218
A
HOH
155
6
HOH
HOH
1219
A
HOH
157
6
HOH
HOH
1220
A
HOH
159
6
HOH
HOH
1221
A
HOH
162
6
HOH
HOH
1222
A
HOH
164
6
HOH
HOH
1223
A
HOH
165
6
HOH
HOH
1224
A
HOH
166
6
HOH
HOH
1225
A
HOH
167
6
HOH
HOH
1226
A
HOH
168
6
HOH
HOH
1227
A
HOH
169
6
HOH
HOH
1228
A
HOH
173
6
HOH
HOH
1229
A
HOH
175
6
HOH
HOH
1230
A
HOH
176
6
HOH
HOH
1231
A
HOH
177
6
HOH
HOH
1232
A
HOH
178
6
HOH
HOH
1233
A
HOH
179
6
HOH
HOH
1234
A
HOH
180
6
HOH
HOH
1235
A
HOH
181
6
HOH
HOH
1236
A
HOH
182
6
HOH
HOH
1237
A
HOH
183
6
HOH
HOH
1238
A
HOH
184
6
HOH
HOH
1239
A
HOH
185
6
HOH
HOH
1240
A
HOH
187
6
HOH
HOH
1241
A
HOH
188
6
HOH
HOH
1242
A
HOH
189
6
HOH
HOH
1243
A
HOH
190
6
HOH
HOH
1244
A
HOH
192
6
HOH
HOH
1245
A
HOH
193
6
HOH
HOH
1246
A
HOH
194
6
HOH
HOH
1247
A
HOH
195
6
HOH
HOH
1248
A
HOH
196
6
HOH
HOH
1249
A
HOH
197
6
HOH
HOH
1250
A
HOH
199
6
HOH
HOH
1251
A
HOH
200
6
HOH
HOH
1252
A
HOH
204
6
HOH
HOH
1253
A
HOH
205
6
HOH
HOH
1254
A
HOH
207
6
HOH
HOH
1255
A
HOH
209
6
HOH
HOH
1256
A
HOH
211
6
HOH
HOH
1257
A
HOH
212
6
HOH
HOH
1258
A
HOH
213
6
HOH
HOH
1259
A
HOH
216
6
HOH
HOH
1260
A
HOH
217
6
HOH
HOH
1261
A
HOH
218
6
HOH
HOH
1262
A
HOH
221
6
HOH
HOH
1263
A
HOH
224
6
HOH
HOH
1264
A
HOH
225
6
HOH
HOH
1265
A
HOH
226
6
HOH
HOH
1266
A
HOH
231
6
HOH
HOH
1267
A
HOH
232
6
HOH
HOH
1268
A
HOH
234
6
HOH
HOH
1269
A
HOH
236
6
HOH
HOH
1270
A
HOH
237
6
HOH
HOH
1271
A
HOH
238
6
HOH
HOH
1272
A
HOH
239
6
HOH
HOH
1273
A
HOH
240
6
HOH
HOH
1274
A
HOH
242
6
HOH
HOH
1275
A
HOH
243
6
HOH
HOH
1276
A
HOH
244
6
HOH
HOH
1277
A
HOH
245
6
HOH
HOH
1278
A
HOH
248
6
HOH
HOH
1279
A
HOH
249
6
HOH
HOH
1280
A
HOH
250
6
HOH
HOH
1281
A
HOH
251
6
HOH
HOH
1282
A
HOH
252
6
HOH
HOH
1283
A
HOH
254
6
HOH
HOH
1284
A
HOH
255
6
HOH
HOH
1285
A
HOH
257
6
HOH
HOH
1286
A
HOH
258
6
HOH
HOH
1287
A
HOH
259
6
HOH
HOH
1288
A
HOH
260
6
HOH
HOH
1289
A
HOH
261
6
HOH
HOH
1290
A
HOH
262
6
HOH
HOH
1291
A
HOH
263
6
HOH
HOH
1292
A
HOH
264
6
HOH
HOH
1293
A
HOH
265
6
HOH
HOH
1294
A
HOH
266
6
HOH
HOH
1295
A
HOH
267
6
HOH
HOH
1296
A
HOH
268
6
HOH
HOH
1297
A
HOH
269
6
HOH
HOH
1298
A
HOH
270
6
HOH
HOH
1299
A
HOH
271
6
HOH
HOH
1300
A
HOH
272
6
HOH
HOH
1301
A
HOH
273
6
HOH
HOH
1302
A
HOH
274
6
HOH
HOH
1303
A
HOH
275
6
HOH
HOH
1304
A
HOH
276
6
HOH
HOH
1305
A
HOH
277
6
HOH
HOH
1306
A
HOH
278
6
HOH
HOH
1307
A
HOH
279
6
HOH
HOH
1308
A
HOH
280
6
HOH
HOH
1309
A
HOH
281
6
HOH
HOH
1310
A
HOH
282
6
HOH
HOH
1311
A
HOH
283
6
HOH
HOH
1312
A
HOH
284
6
HOH
HOH
1313
A
HOH
285
6
HOH
HOH
1314
A
HOH
286
6
HOH
HOH
1315
A
HOH
287
6
HOH
HOH
1316
A
HOH
288
6
HOH
HOH
1317
A
HOH
289
6
HOH
HOH
1318
A
HOH
290
6
HOH
HOH
1319
A
HOH
291
6
HOH
HOH
1320
A
HOH
292
6
HOH
HOH
1321
A
HOH
293
6
HOH
HOH
1322
A
HOH
294
6
HOH
HOH
1323
A
HOH
295
6
HOH
HOH
1324
A
HOH
296
6
HOH
HOH
1325
A
HOH
297
6
HOH
HOH
1326
A
HOH
298
6
HOH
HOH
1327
A
HOH
301
6
HOH
HOH
1328
A
HOH
302
6
HOH
HOH
1329
A
HOH
303
6
HOH
HOH
1330
A
HOH
304
6
HOH
HOH
1331
A
HOH
305
6
HOH
HOH
1332
A
HOH
306
6
HOH
HOH
1333
A
HOH
307
6
HOH
HOH
1334
A
HOH
308
6
HOH
HOH
1335
A
HOH
309
6
HOH
HOH
1336
A
HOH
310
6
HOH
HOH
1337
A
HOH
311
6
HOH
HOH
1338
A
HOH
312
6
HOH
HOH
1339
A
HOH
313
6
HOH
HOH
1340
A
HOH
314
6
HOH
HOH
1341
A
HOH
315
6
HOH
HOH
1342
A
HOH
316
6
HOH
HOH
1343
A
HOH
317
6
HOH
HOH
1344
A
HOH
318
6
HOH
HOH
1345
A
HOH
319
6
HOH
HOH
1346
A
HOH
320
6
HOH
HOH
1347
A
HOH
321
6
HOH
HOH
1348
A
HOH
322
6
HOH
HOH
1349
A
HOH
323
6
HOH
HOH
1350
A
HOH
324
6
HOH
HOH
1351
A
HOH
325
6
HOH
HOH
1352
A
HOH
326
6
HOH
HOH
1353
A
HOH
327
6
HOH
HOH
1354
A
HOH
328
6
HOH
HOH
1355
A
HOH
329
6
HOH
HOH
1356
A
HOH
331
6
HOH
HOH
1357
A
HOH
332
6
HOH
HOH
1358
A
HOH
333
6
HOH
HOH
1359
A
HOH
334
6
HOH
HOH
1360
A
HOH
335
6
HOH
HOH
1361
A
HOH
336
6
HOH
HOH
1362
A
HOH
337
6
HOH
HOH
1363
A
HOH
338
6
HOH
HOH
1364
A
HOH
339
6
HOH
HOH
1365
A
HOH
340
6
HOH
HOH
1366
A
HOH
341
6
HOH
HOH
1367
A
HOH
354
6
HOH
HOH
1368
A
HOH
355
6
HOH
HOH
1369
A
HOH
357
6
HOH
HOH
1370
A
HOH
359
6
HOH
HOH
1371
A
HOH
360
6
HOH
HOH
1372
A
HOH
361
6
HOH
HOH
1373
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
DA
5
n
5
DA
5
B
DC
6
n
6
DC
6
B
DA
7
n
7
DA
7
B
DG
8
n
8
DG
8
B
DG
9
n
9
DG
9
B
DA
10
n
10
DA
10
B
DC
11
n
11
DC
11
B
DT
12
n
12
DT
12
B
DC
13
n
13
DC
13
B
DG
14
n
14
DG
14
B
n
1
1
C
DC
2
n
2
DC
2
C
DA
3
n
3
DA
3
C
DC
4
n
4
DC
4
C
DG
5
n
5
DG
5
C
DA
6
n
6
DA
6
C
DG
7
n
7
DG
7
C
DT
8
n
8
DT
8
C
DC
9
n
9
DC
9
C
DC
10
n
10
DC
10
C
DT
11
n
11
DT
11
C
DG
12
n
12
DG
12
C
DT
13
n
13
DT
13
C
DA
14
n
14
DA
14
C
DG
15
n
15
DG
15
C
DC
16
n
16
DC
16
C
n
17
17
C
LYS
298
n
1
LYS
298
A
MET
299
n
2
MET
299
A
ALA
300
n
3
ALA
300
A
PHE
301
n
4
PHE
301
A
THR
302
n
5
THR
302
A
LEU
303
n
6
LEU
303
A
ALA
304
n
7
ALA
304
A
ASP
305
n
8
ASP
305
A
ARG
306
n
9
ARG
306
A
VAL
307
n
10
VAL
307
A
THR
308
n
11
THR
308
A
GLU
309
n
12
GLU
309
A
GLU
310
n
13
GLU
310
A
MET
311
n
14
MET
311
A
LEU
312
n
15
LEU
312
A
ALA
313
n
16
ALA
313
A
ASP
314
n
17
ASP
314
A
LYS
315
n
18
LYS
315
A
ALA
316
n
19
ALA
316
A
ALA
317
n
20
ALA
317
A
LEU
318
n
21
LEU
318
A
VAL
319
n
22
VAL
319
A
VAL
320
n
23
VAL
320
A
GLU
321
n
24
GLU
321
A
VAL
322
n
25
VAL
322
A
VAL
323
n
26
VAL
323
A
GLU
324
n
27
GLU
324
A
GLU
325
n
28
GLU
325
A
ASN
326
n
29
ASN
326
A
TYR
327
n
30
TYR
327
A
HIS
328
n
31
HIS
328
A
ASP
329
n
32
ASP
329
A
ALA
330
n
33
ALA
330
A
PRO
331
n
34
PRO
331
A
ILE
332
n
35
ILE
332
A
VAL
333
n
36
VAL
333
A
GLY
334
n
37
GLY
334
A
ILE
335
n
38
ILE
335
A
ALA
336
n
39
ALA
336
A
VAL
337
n
40
VAL
337
A
VAL
338
n
41
VAL
338
A
ASN
339
n
42
ASN
339
A
GLU
340
n
43
GLU
340
A
HIS
341
n
44
HIS
341
A
GLY
342
n
45
GLY
342
A
ARG
343
n
46
ARG
343
A
PHE
344
n
47
PHE
344
A
PHE
345
n
48
PHE
345
A
LEU
346
n
49
LEU
346
A
ARG
347
n
50
ARG
347
A
PRO
348
n
51
PRO
348
A
GLU
349
n
52
GLU
349
A
THR
350
n
53
THR
350
A
ALA
351
n
54
ALA
351
A
LEU
352
n
55
LEU
352
A
ALA
353
n
56
ALA
353
A
ASP
354
n
57
ASP
354
A
PRO
355
n
58
PRO
355
A
GLN
356
n
59
GLN
356
A
PHE
357
n
60
PHE
357
A
VAL
358
n
61
VAL
358
A
ALA
359
n
62
ALA
359
A
TRP
360
n
63
TRP
360
A
LEU
361
n
64
LEU
361
A
GLY
362
n
65
GLY
362
A
ASP
363
n
66
ASP
363
A
GLU
364
n
67
GLU
364
A
THR
365
n
68
THR
365
A
LYS
366
n
69
LYS
366
A
LYS
367
n
70
LYS
367
A
LYS
368
n
71
LYS
368
A
SER
369
n
72
SER
369
A
MET
370
n
73
MET
370
A
PHE
371
n
74
PHE
371
A
ASP
372
n
75
ASP
372
A
SER
373
n
76
SER
373
A
LYS
374
n
77
LYS
374
A
ARG
375
n
78
ARG
375
A
ALA
376
n
79
ALA
376
A
ALA
377
n
80
ALA
377
A
VAL
378
n
81
VAL
378
A
ALA
379
n
82
ALA
379
A
LEU
380
n
83
LEU
380
A
LYS
381
n
84
LYS
381
A
TRP
382
n
85
TRP
382
A
LYS
383
n
86
LYS
383
A
GLY
384
n
87
GLY
384
A
ILE
385
n
88
ILE
385
A
GLU
386
n
89
GLU
386
A
LEU
387
n
90
LEU
387
A
CYS
388
n
91
CYS
388
A
GLY
389
n
92
GLY
389
A
VAL
390
n
93
VAL
390
A
SER
391
n
94
SER
391
A
PHE
392
n
95
PHE
392
A
ASP
393
n
96
ASP
393
A
LEU
394
n
97
LEU
394
A
LEU
395
n
98
LEU
395
A
LEU
396
n
99
LEU
396
A
ALA
397
n
100
ALA
397
A
ALA
398
n
101
ALA
398
A
TYR
399
n
102
TYR
399
A
LEU
400
n
103
LEU
400
A
LEU
401
n
104
LEU
401
A
ASP
402
n
105
ASP
402
A
PRO
403
n
106
PRO
403
A
ALA
404
n
107
ALA
404
A
GLN
405
n
108
GLN
405
A
GLY
406
n
109
GLY
406
A
VAL
407
n
110
VAL
407
A
ASP
408
n
111
ASP
408
A
ASP
409
n
112
ASP
409
A
VAL
410
n
113
VAL
410
A
ALA
411
n
114
ALA
411
A
ALA
412
n
115
ALA
412
A
ALA
413
n
116
ALA
413
A
ALA
414
n
117
ALA
414
A
LYS
415
n
118
LYS
415
A
MET
416
n
119
MET
416
A
LYS
417
n
120
LYS
417
A
GLN
418
n
121
GLN
418
A
TYR
419
n
122
TYR
419
A
GLU
420
n
123
GLU
420
A
ALA
421
n
124
ALA
421
A
VAL
422
n
125
VAL
422
A
ARG
423
n
126
ARG
423
A
PRO
424
n
127
PRO
424
A
ASP
425
n
128
ASP
425
A
GLU
426
n
129
GLU
426
A
ALA
427
n
130
ALA
427
A
VAL
428
n
131
VAL
428
A
TYR
429
n
132
TYR
429
A
GLY
430
n
133
GLY
430
A
LYS
431
n
134
LYS
431
A
GLY
432
n
135
GLY
432
A
ALA
433
n
136
ALA
433
A
LYS
434
n
137
LYS
434
A
ARG
435
n
138
ARG
435
A
ALA
436
n
139
ALA
436
A
VAL
437
n
140
VAL
437
A
PRO
438
n
141
PRO
438
A
ASP
439
n
142
ASP
439
A
GLU
440
n
143
GLU
440
A
PRO
441
n
144
PRO
441
A
VAL
442
n
145
VAL
442
A
LEU
443
n
146
LEU
443
A
ALA
444
n
147
ALA
444
A
GLU
445
n
148
GLU
445
A
HIS
446
n
149
HIS
446
A
LEU
447
n
150
LEU
447
A
VAL
448
n
151
VAL
448
A
ARG
449
n
152
ARG
449
A
LYS
450
n
153
LYS
450
A
ALA
451
n
154
ALA
451
A
ALA
452
n
155
ALA
452
A
ALA
453
n
156
ALA
453
A
ILE
454
n
157
ILE
454
A
TRP
455
n
158
TRP
455
A
GLU
456
n
159
GLU
456
A
LEU
457
n
160
LEU
457
A
GLU
458
n
161
GLU
458
A
ARG
459
n
162
ARG
459
A
PRO
460
n
163
PRO
460
A
PHE
461
n
164
PHE
461
A
LEU
462
n
165
LEU
462
A
ASP
463
n
166
ASP
463
A
GLU
464
n
167
GLU
464
A
LEU
465
n
168
LEU
465
A
ARG
466
n
169
ARG
466
A
ARG
467
n
170
ARG
467
A
ASN
468
n
171
ASN
468
A
GLU
469
n
172
GLU
469
A
GLN
470
n
173
GLN
470
A
ASP
471
n
174
ASP
471
A
ARG
472
n
175
ARG
472
A
LEU
473
n
176
LEU
473
A
LEU
474
n
177
LEU
474
A
VAL
475
n
178
VAL
475
A
GLU
476
n
179
GLU
476
A
LEU
477
n
180
LEU
477
A
GLU
478
n
181
GLU
478
A
GLN
479
n
182
GLN
479
A
PRO
480
n
183
PRO
480
A
LEU
481
n
184
LEU
481
A
SER
482
n
185
SER
482
A
SER
483
n
186
SER
483
A
ILE
484
n
187
ILE
484
A
LEU
485
n
188
LEU
485
A
ALA
486
n
189
ALA
486
A
GLU
487
n
190
GLU
487
A
MET
488
n
191
MET
488
A
GLU
489
n
192
GLU
489
A
PHE
490
n
193
PHE
490
A
ALA
491
n
194
ALA
491
A
GLY
492
n
195
GLY
492
A
VAL
493
n
196
VAL
493
A
LYS
494
n
197
LYS
494
A
VAL
495
n
198
VAL
495
A
ASP
496
n
199
ASP
496
A
THR
497
n
200
THR
497
A
LYS
498
n
201
LYS
498
A
ARG
499
n
202
ARG
499
A
LEU
500
n
203
LEU
500
A
GLU
501
n
204
GLU
501
A
GLN
502
n
205
GLN
502
A
MET
503
n
206
MET
503
A
GLY
504
n
207
GLY
504
A
LYS
505
n
208
LYS
505
A
GLU
506
n
209
GLU
506
A
LEU
507
n
210
LEU
507
A
ALA
508
n
211
ALA
508
A
GLU
509
n
212
GLU
509
A
GLN
510
n
213
GLN
510
A
LEU
511
n
214
LEU
511
A
GLY
512
n
215
GLY
512
A
THR
513
n
216
THR
513
A
VAL
514
n
217
VAL
514
A
GLU
515
n
218
GLU
515
A
GLN
516
n
219
GLN
516
A
ARG
517
n
220
ARG
517
A
ILE
518
n
221
ILE
518
A
TYR
519
n
222
TYR
519
A
GLU
520
n
223
GLU
520
A
LEU
521
n
224
LEU
521
A
ALA
522
n
225
ALA
522
A
GLY
523
n
226
GLY
523
A
GLN
524
n
227
GLN
524
A
GLU
525
n
228
GLU
525
A
PHE
526
n
229
PHE
526
A
ASN
527
n
230
ASN
527
A
ILE
528
n
231
ILE
528
A
ASN
529
n
232
ASN
529
A
SER
530
n
233
SER
530
A
PRO
531
n
234
PRO
531
A
LYS
532
n
235
LYS
532
A
GLN
533
n
236
GLN
533
A
LEU
534
n
237
LEU
534
A
GLY
535
n
238
GLY
535
A
VAL
536
n
239
VAL
536
A
ILE
537
n
240
ILE
537
A
LEU
538
n
241
LEU
538
A
PHE
539
n
242
PHE
539
A
GLU
540
n
243
GLU
540
A
LYS
541
n
244
LYS
541
A
LEU
542
n
245
LEU
542
A
GLN
543
n
246
GLN
543
A
LEU
544
n
247
LEU
544
A
PRO
545
n
248
PRO
545
A
VAL
546
n
249
VAL
546
A
LEU
547
n
250
LEU
547
A
LYS
548
n
251
LYS
548
A
n
252
549
A
n
253
550
A
n
254
551
A
n
255
552
A
GLY
553
n
256
GLY
553
A
TYR
554
n
257
TYR
554
A
SER
555
n
258
SER
555
A
THR
556
n
259
THR
556
A
SER
557
n
260
SER
557
A
ALA
558
n
261
ALA
558
A
ASP
559
n
262
ASP
559
A
VAL
560
n
263
VAL
560
A
LEU
561
n
264
LEU
561
A
GLU
562
n
265
GLU
562
A
LYS
563
n
266
LYS
563
A
LEU
564
n
267
LEU
564
A
ALA
565
n
268
ALA
565
A
PRO
566
n
269
PRO
566
A
TYR
567
n
270
TYR
567
A
HIS
568
n
271
HIS
568
A
GLU
569
n
272
GLU
569
A
ILE
570
n
273
ILE
570
A
VAL
571
n
274
VAL
571
A
GLU
572
n
275
GLU
572
A
ASN
573
n
276
ASN
573
A
ILE
574
n
277
ILE
574
A
LEU
575
n
278
LEU
575
A
HIS
576
n
279
HIS
576
A
TYR
577
n
280
TYR
577
A
ARG
578
n
281
ARG
578
A
GLN
579
n
282
GLN
579
A
LEU
580
n
283
LEU
580
A
GLY
581
n
284
GLY
581
A
LYS
582
n
285
LYS
582
A
LEU
583
n
286
LEU
583
A
GLN
584
n
287
GLN
584
A
SER
585
n
288
SER
585
A
THR
586
n
289
THR
586
A
TYR
587
n
290
TYR
587
A
ILE
588
n
291
ILE
588
A
GLU
589
n
292
GLU
589
A
GLY
590
n
293
GLY
590
A
LEU
591
n
294
LEU
591
A
LEU
592
n
295
LEU
592
A
LYS
593
n
296
LYS
593
A
VAL
594
n
297
VAL
594
A
VAL
595
n
298
VAL
595
A
ARG
596
n
299
ARG
596
A
PRO
597
n
300
PRO
597
A
ASP
598
n
301
ASP
598
A
THR
599
n
302
THR
599
A
LYS
600
n
303
LYS
600
A
LYS
601
n
304
LYS
601
A
VAL
602
n
305
VAL
602
A
HIS
603
n
306
HIS
603
A
THR
604
n
307
THR
604
A
ILE
605
n
308
ILE
605
A
PHE
606
n
309
PHE
606
A
ASN
607
n
310
ASN
607
A
GLN
608
n
311
GLN
608
A
ALA
609
n
312
ALA
609
A
LEU
610
n
313
LEU
610
A
THR
611
n
314
THR
611
A
GLN
612
n
315
GLN
612
A
THR
613
n
316
THR
613
A
GLY
614
n
317
GLY
614
A
ARG
615
n
318
ARG
615
A
LEU
616
n
319
LEU
616
A
SER
617
n
320
SER
617
A
SER
618
n
321
SER
618
A
THR
619
n
322
THR
619
A
GLU
620
n
323
GLU
620
A
PRO
621
n
324
PRO
621
A
ASN
622
n
325
ASN
622
A
LEU
623
n
326
LEU
623
A
GLN
624
n
327
GLN
624
A
ASN
625
n
328
ASN
625
A
ILE
626
n
329
ILE
626
A
PRO
627
n
330
PRO
627
A
ILE
628
n
331
ILE
628
A
ARG
629
n
332
ARG
629
A
LEU
630
n
333
LEU
630
A
GLU
631
n
334
GLU
631
A
GLU
632
n
335
GLU
632
A
GLY
633
n
336
GLY
633
A
ARG
634
n
337
ARG
634
A
LYS
635
n
338
LYS
635
A
ILE
636
n
339
ILE
636
A
ARG
637
n
340
ARG
637
A
GLN
638
n
341
GLN
638
A
ALA
639
n
342
ALA
639
A
PHE
640
n
343
PHE
640
A
VAL
641
n
344
VAL
641
A
PRO
642
n
345
PRO
642
A
SER
643
n
346
SER
643
A
GLU
644
n
347
GLU
644
A
SER
645
n
348
SER
645
A
ASP
646
n
349
ASP
646
A
TRP
647
n
350
TRP
647
A
LEU
648
n
351
LEU
648
A
ILE
649
n
352
ILE
649
A
PHE
650
n
353
PHE
650
A
ALA
651
n
354
ALA
651
A
ALA
652
n
355
ALA
652
A
ASP
653
n
356
ASP
653
A
TYR
654
n
357
TYR
654
A
SER
655
n
358
SER
655
A
GLN
656
n
359
GLN
656
A
ILE
657
n
360
ILE
657
A
GLU
658
n
361
GLU
658
A
LEU
659
n
362
LEU
659
A
ARG
660
n
363
ARG
660
A
VAL
661
n
364
VAL
661
A
LEU
662
n
365
LEU
662
A
ALA
663
n
366
ALA
663
A
HIS
664
n
367
HIS
664
A
ILE
665
n
368
ILE
665
A
ALA
666
n
369
ALA
666
A
GLU
667
n
370
GLU
667
A
ASP
668
n
371
ASP
668
A
ASP
669
n
372
ASP
669
A
ASN
670
n
373
ASN
670
A
LEU
671
n
374
LEU
671
A
MET
672
n
375
MET
672
A
GLU
673
n
376
GLU
673
A
ALA
674
n
377
ALA
674
A
PHE
675
n
378
PHE
675
A
ARG
676
n
379
ARG
676
A
ARG
677
n
380
ARG
677
A
ASP
678
n
381
ASP
678
A
LEU
679
n
382
LEU
679
A
ASP
680
n
383
ASP
680
A
ILE
681
n
384
ILE
681
A
HIS
682
n
385
HIS
682
A
THR
683
n
386
THR
683
A
LYS
684
n
387
LYS
684
A
THR
685
n
388
THR
685
A
ALA
686
n
389
ALA
686
A
MET
687
n
390
MET
687
A
ASP
688
n
391
ASP
688
A
ILE
689
n
392
ILE
689
A
PHE
690
n
393
PHE
690
A
GLN
691
n
394
GLN
691
A
VAL
692
n
395
VAL
692
A
SER
693
n
396
SER
693
A
GLU
694
n
397
GLU
694
A
ASP
695
n
398
ASP
695
A
GLU
696
n
399
GLU
696
A
VAL
697
n
400
VAL
697
A
THR
698
n
401
THR
698
A
PRO
699
n
402
PRO
699
A
ASN
700
n
403
ASN
700
A
MET
701
n
404
MET
701
A
ARG
702
n
405
ARG
702
A
ARG
703
n
406
ARG
703
A
GLN
704
n
407
GLN
704
A
ALA
705
n
408
ALA
705
A
LYS
706
n
409
LYS
706
A
ALA
707
n
410
ALA
707
A
VAL
708
n
411
VAL
708
A
ASN
709
n
412
ASN
709
A
PHE
710
n
413
PHE
710
A
GLY
711
n
414
GLY
711
A
ILE
712
n
415
ILE
712
A
VAL
713
n
416
VAL
713
A
TYR
714
n
417
TYR
714
A
GLY
715
n
418
GLY
715
A
ILE
716
n
419
ILE
716
A
SER
717
n
420
SER
717
A
ASP
718
n
421
ASP
718
A
TYR
719
n
422
TYR
719
A
GLY
720
n
423
GLY
720
A
LEU
721
n
424
LEU
721
A
ALA
722
n
425
ALA
722
A
GLN
723
n
426
GLN
723
A
ASN
724
n
427
ASN
724
A
LEU
725
n
428
LEU
725
A
ASN
726
n
429
ASN
726
A
ILE
727
n
430
ILE
727
A
SER
728
n
431
SER
728
A
ARG
729
n
432
ARG
729
A
LYS
730
n
433
LYS
730
A
GLU
731
n
434
GLU
731
A
ALA
732
n
435
ALA
732
A
ALA
733
n
436
ALA
733
A
GLU
734
n
437
GLU
734
A
PHE
735
n
438
PHE
735
A
ILE
736
n
439
ILE
736
A
GLU
737
n
440
GLU
737
A
ARG
738
n
441
ARG
738
A
TYR
739
n
442
TYR
739
A
PHE
740
n
443
PHE
740
A
GLU
741
n
444
GLU
741
A
SER
742
n
445
SER
742
A
PHE
743
n
446
PHE
743
A
PRO
744
n
447
PRO
744
A
GLY
745
n
448
GLY
745
A
VAL
746
n
449
VAL
746
A
LYS
747
n
450
LYS
747
A
ARG
748
n
451
ARG
748
A
TYR
749
n
452
TYR
749
A
MET
750
n
453
MET
750
A
GLU
751
n
454
GLU
751
A
ASN
752
n
455
ASN
752
A
ILE
753
n
456
ILE
753
A
VAL
754
n
457
VAL
754
A
GLN
755
n
458
GLN
755
A
GLU
756
n
459
GLU
756
A
ALA
757
n
460
ALA
757
A
LYS
758
n
461
LYS
758
A
GLN
759
n
462
GLN
759
A
LYS
760
n
463
LYS
760
A
GLY
761
n
464
GLY
761
A
TYR
762
n
465
TYR
762
A
VAL
763
n
466
VAL
763
A
THR
764
n
467
THR
764
A
THR
765
n
468
THR
765
A
LEU
766
n
469
LEU
766
A
LEU
767
n
470
LEU
767
A
HIS
768
n
471
HIS
768
A
ARG
769
n
472
ARG
769
A
ARG
770
n
473
ARG
770
A
ARG
771
n
474
ARG
771
A
TYR
772
n
475
TYR
772
A
LEU
773
n
476
LEU
773
A
PRO
774
n
477
PRO
774
A
ASP
775
n
478
ASP
775
A
ILE
776
n
479
ILE
776
A
THR
777
n
480
THR
777
A
SER
778
n
481
SER
778
A
ARG
779
n
482
ARG
779
A
ASN
780
n
483
ASN
780
A
PHE
781
n
484
PHE
781
A
ASN
782
n
485
ASN
782
A
VAL
783
n
486
VAL
783
A
ARG
784
n
487
ARG
784
A
SER
785
n
488
SER
785
A
PHE
786
n
489
PHE
786
A
ALA
787
n
490
ALA
787
A
GLU
788
n
491
GLU
788
A
ARG
789
n
492
ARG
789
A
MET
790
n
493
MET
790
A
ALA
791
n
494
ALA
791
A
MET
792
n
495
MET
792
A
ASN
793
n
496
ASN
793
A
THR
794
n
497
THR
794
A
PRO
795
n
498
PRO
795
A
ILE
796
n
499
ILE
796
A
GLN
797
n
500
GLN
797
A
GLY
798
n
501
GLY
798
A
SER
799
n
502
SER
799
A
ALA
800
n
503
ALA
800
A
ALA
801
n
504
ALA
801
A
ASP
802
n
505
ASP
802
A
ILE
803
n
506
ILE
803
A
ILE
804
n
507
ILE
804
A
LYS
805
n
508
LYS
805
A
LYS
806
n
509
LYS
806
A
ALA
807
n
510
ALA
807
A
MET
808
n
511
MET
808
A
ILE
809
n
512
ILE
809
A
ASP
810
n
513
ASP
810
A
LEU
811
n
514
LEU
811
A
ASN
812
n
515
ASN
812
A
ALA
813
n
516
ALA
813
A
ARG
814
n
517
ARG
814
A
LEU
815
n
518
LEU
815
A
LYS
816
n
519
LYS
816
A
GLU
817
n
520
GLU
817
A
GLU
818
n
521
GLU
818
A
ARG
819
n
522
ARG
819
A
LEU
820
n
523
LEU
820
A
GLN
821
n
524
GLN
821
A
ALA
822
n
525
ALA
822
A
HIS
823
n
526
HIS
823
A
LEU
824
n
527
LEU
824
A
LEU
825
n
528
LEU
825
A
LEU
826
n
529
LEU
826
A
GLN
827
n
530
GLN
827
A
VAL
828
n
531
VAL
828
A
HIS
829
n
532
HIS
829
A
ASP
830
n
533
ASP
830
A
GLU
831
n
534
GLU
831
A
LEU
832
n
535
LEU
832
A
ILE
833
n
536
ILE
833
A
LEU
834
n
537
LEU
834
A
GLU
835
n
538
GLU
835
A
ALA
836
n
539
ALA
836
A
PRO
837
n
540
PRO
837
A
LYS
838
n
541
LYS
838
A
GLU
839
n
542
GLU
839
A
GLU
840
n
543
GLU
840
A
MET
841
n
544
MET
841
A
GLU
842
n
545
GLU
842
A
ARG
843
n
546
ARG
843
A
LEU
844
n
547
LEU
844
A
CYS
845
n
548
CYS
845
A
ARG
846
n
549
ARG
846
A
LEU
847
n
550
LEU
847
A
VAL
848
n
551
VAL
848
A
PRO
849
n
552
PRO
849
A
GLU
850
n
553
GLU
850
A
VAL
851
n
554
VAL
851
A
MET
852
n
555
MET
852
A
GLU
853
n
556
GLU
853
A
GLN
854
n
557
GLN
854
A
ALA
855
n
558
ALA
855
A
VAL
856
n
559
VAL
856
A
THR
857
n
560
THR
857
A
LEU
858
n
561
LEU
858
A
ARG
859
n
562
ARG
859
A
VAL
860
n
563
VAL
860
A
PRO
861
n
564
PRO
861
A
LEU
862
n
565
LEU
862
A
LYS
863
n
566
LYS
863
A
VAL
864
n
567
VAL
864
A
ASP
865
n
568
ASP
865
A
TYR
866
n
569
TYR
866
A
HIS
867
n
570
HIS
867
A
TYR
868
n
571
TYR
868
A
GLY
869
n
572
GLY
869
A
SER
870
n
573
SER
870
A
THR
871
n
574
THR
871
A
TRP
872
n
575
TRP
872
A
TYR
873
n
576
TYR
873
A
ASP
874
n
577
ASP
874
A
ALA
875
n
578
ALA
875
A
LYS
876
n
579
LYS
876
A
author_and_software_defined_assembly
PISA
3
trimeric
5710
-62
27920
B
DG
14
A
OP1
DG
14
1_555
B
CA
101
D
CA
CA
1_555
B
HOH
201
I
O
HOH
1_555
95.2
B
DG
14
A
OP1
DG
14
1_555
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O
POP
1_555
147.5
B
HOH
201
I
O
HOH
1_555
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O
POP
1_555
112.1
B
DG
14
A
OP1
DG
14
1_555
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O2
POP
1_555
103.1
B
HOH
201
I
O
HOH
1_555
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O2
POP
1_555
91.5
A
POP
1001
E
O
POP
1_555
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O2
POP
1_555
60.6
A
ASP
354
C
OD1
ASP
57
1_555
A
CA
1004
H
CA
CA
1_555
A
GLN
356
C
OE1
GLN
59
1_555
109.7
A
ASP
354
C
OD1
ASP
57
1_555
A
CA
1004
H
CA
CA
1_555
A
HOH
1112
K
O
HOH
1_555
143.0
A
GLN
356
C
OE1
GLN
59
1_555
A
CA
1004
H
CA
CA
1_555
A
HOH
1112
K
O
HOH
1_555
106.5
A
ASP
354
C
OD1
ASP
57
1_555
A
CA
1004
H
CA
CA
1_555
A
HOH
1342
K
O
HOH
1_555
77.1
A
GLN
356
C
OE1
GLN
59
1_555
A
CA
1004
H
CA
CA
1_555
A
HOH
1342
K
O
HOH
1_555
108.0
A
HOH
1112
K
O
HOH
1_555
A
CA
1004
H
CA
CA
1_555
A
HOH
1342
K
O
HOH
1_555
85.0
A
ASP
830
C
OD1
ASP
533
1_555
A
CA
1002
F
CA
CA
1_555
A
GLU
831
C
OE2
GLU
534
1_555
116.1
A
ASP
830
C
OD1
ASP
533
1_555
A
CA
1002
F
CA
CA
1_555
A
POP
1001
E
O
POP
1_555
122.5
A
GLU
831
C
OE2
GLU
534
1_555
A
CA
1002
F
CA
CA
1_555
A
POP
1001
E
O
POP
1_555
120.3
A
ASP
830
C
OD1
ASP
533
1_555
A
CA
1002
F
CA
CA
1_555
A
POP
1001
E
O5
POP
1_555
130.1
A
GLU
831
C
OE2
GLU
534
1_555
A
CA
1002
F
CA
CA
1_555
A
POP
1001
E
O5
POP
1_555
97.8
A
POP
1001
E
O
POP
1_555
A
CA
1002
F
CA
CA
1_555
A
POP
1001
E
O5
POP
1_555
51.5
A
LEU
858
C
O
LEU
561
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1186
K
O
HOH
1_555
75.9
A
LEU
858
C
O
LEU
561
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1240
K
O
HOH
1_555
77.4
A
HOH
1186
K
O
HOH
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1240
K
O
HOH
1_555
112.7
A
LEU
858
C
O
LEU
561
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1257
K
O
HOH
1_555
142.3
A
HOH
1186
K
O
HOH
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1257
K
O
HOH
1_555
90.0
A
HOH
1240
K
O
HOH
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1257
K
O
HOH
1_555
76.3
A
LEU
858
C
O
LEU
561
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1367
K
O
HOH
1_555
75.1
A
HOH
1186
K
O
HOH
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1367
K
O
HOH
1_555
136.0
A
HOH
1240
K
O
HOH
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1367
K
O
HOH
1_555
92.1
A
HOH
1257
K
O
HOH
1_555
A
CA
1003
G
CA
CA
1_555
A
HOH
1367
K
O
HOH
1_555
132.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
302
C
N
THR
5
A
O
PHE
345
C
O
PHE
48
A
O
PHE
344
C
O
PHE
47
A
N
VAL
337
C
N
VAL
40
A
O
VAL
338
C
O
VAL
41
A
N
ALA
317
C
N
ALA
20
A
N
LEU
318
C
N
LEU
21
A
O
SER
369
C
O
SER
72
A
N
MET
370
C
N
MET
73
A
O
PHE
392
C
O
PHE
95
A
O
VAL
602
C
O
VAL
305
A
N
VAL
493
C
N
VAL
196
A
N
LYS
494
C
N
LYS
197
A
O
VAL
641
C
O
VAL
344
A
N
ILE
605
C
N
ILE
308
A
O
THR
619
C
O
THR
322
A
N
LEU
825
C
N
LEU
528
A
O
ILE
833
C
O
ILE
536
A
O
ALA
836
C
O
ALA
539
A
N
LEU
648
C
N
LEU
351
A
N
ALA
651
C
N
ALA
354
A
O
HIS
867
C
O
HIS
570
A
N
VAL
763
C
N
VAL
466
A
O
ARG
771
C
O
ARG
474
1
C
C5'
DC
16
B
C5'
DC
16
1
Y
1
C
C4'
DC
16
B
C4'
DC
16
1
Y
1
C
O4'
DC
16
B
O4'
DC
16
1
Y
1
C
C3'
DC
16
B
C3'
DC
16
1
Y
1
C
O3'
DC
16
B
O3'
DC
16
1
Y
1
C
C2'
DC
16
B
C2'
DC
16
1
Y
1
C
C1'
DC
16
B
C1'
DC
16
1
Y
1
C
N1
DC
16
B
N1
DC
16
1
Y
1
C
C2
DC
16
B
C2
DC
16
1
Y
1
C
O2
DC
16
B
O2
DC
16
1
Y
1
C
N3
DC
16
B
N3
DC
16
1
Y
1
C
C4
DC
16
B
C4
DC
16
1
Y
1
C
N4
DC
16
B
N4
DC
16
1
Y
1
C
C5
DC
16
B
C5
DC
16
1
Y
1
C
C6
DC
16
B
C6
DC
16
1
Y
1
B
DG
1
A
DG
1
1
Y
1
B
DG
2
A
DG
2
1
Y
1
B
DC
3
A
DC
3
1
Y
1
B
DT
4
A
DT
4
1
Y
1
C
DT
1
B
DT
1
1
Y
1
C
DC
17
B
DC
17
1
Y
1
A
LYS
549
C
LYS
252
1
Y
1
A
THR
550
C
THR
253
1
Y
1
A
LYS
551
C
LYS
254
1
Y
1
A
THR
552
C
THR
255
1
Y
1
3.64
0.30
108.30
111.94
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
9.23
1.20
119.70
128.93
B
B
B
C3'
O3'
P
DA
DA
DC
5
5
6
Y
1
-5.62
0.70
108.00
102.38
B
B
B
O4'
C1'
N9
DA
DA
DA
7
7
7
N
1
2.88
0.30
108.30
111.18
B
B
B
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
-2.56
0.40
104.50
101.94
B
B
B
O4'
C4'
C3'
DA
DA
DA
10
10
10
N
1
-5.70
0.70
102.20
96.50
B
B
B
C4'
C3'
C2'
DA
DA
DA
10
10
10
N
1
6.31
0.30
108.30
114.61
B
B
B
O4'
C1'
N1
DC
DC
DC
11
11
11
N
1
-3.20
0.40
104.50
101.30
B
B
B
O4'
C4'
C3'
DT
DT
DT
12
12
12
N
1
1.96
0.30
108.30
110.26
B
B
B
O4'
C1'
N1
DT
DT
DT
12
12
12
N
1
-3.68
0.60
122.30
118.62
B
B
B
N3
C2
O2
DT
DT
DT
12
12
12
N
1
4.38
0.60
119.00
123.38
B
B
B
C4
C5
C7
DT
DT
DT
12
12
12
N
1
-2.65
0.40
104.50
101.85
B
B
B
O4'
C4'
C3'
DC
DC
DC
13
13
13
N
1
1.82
0.30
108.30
110.12
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
-3.62
0.60
128.60
124.98
B
B
B
C5
C6
O6
DG
DG
DG
14
14
14
N
1
4.52
0.30
108.30
112.82
C
C
C
O4'
C1'
N9
DA
DA
DA
3
3
3
N
1
3.49
0.30
108.30
111.79
C
C
C
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
10.59
1.20
119.70
130.29
C
C
C
C3'
O3'
P
DG
DG
DT
7
7
8
Y
1
5.93
0.30
108.30
114.23
C
C
C
O4'
C1'
N1
DT
DT
DT
13
13
13
N
1
3.49
0.30
108.30
111.79
C
C
C
O4'
C1'
N9
DA
DA
DA
14
14
14
N
1
7.70
0.30
108.30
116.00
C
C
C
O4'
C1'
N9
DG
DG
DG
15
15
15
N
1
B
B
O3'
C3'
DG
DG
14
14
-0.045
0.006
1.419
1.374
N
1
A
ALA
421
-85.49
37.99
1
A
LYS
431
-97.86
-99.36
1
A
ILE
588
-102.46
-71.59
1
A
ILE
628
-150.53
-24.40
1
A
HIS
829
72.69
-73.73
32.076
1.87
0.00
0.00
-1.11
0.00
-0.77
0.952
0.919
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.24275
0.18509
0.19090
0.19090
2.18
70.16
4433
45712
39669
10.1
96.48
5.453
0.138
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.234
0.206
0.80
0.80
1.40
3HT3
MAXIMUM LIKELIHOOD
MASK
2.18
70.16
300
5427
13
497
4617
0.018
0.022
5307
1.758
2.095
7286
5.919
5.000
585
38.030
24.280
236
17.744
15.000
878
18.785
15.000
39
0.114
0.200
816
0.008
0.021
3841
0.896
1.500
2892
1.767
2.000
4672
2.988
3.000
2415
4.807
4.500
2608
0.334
0.273
2.236
273
2237
20
75.63
2.18
70.16
4DSK
45712
44295
0
0
0.085
1
19.8
5.6
96.9
2.18
2.26
2.2
4497
0.374
1
2.3
78.5
data collection
HKL-2000
phasing
PHASES
refinement
REFMAC
5.5.0109
data reduction
HKL-2000
data scaling
HKL-2000
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, PPi and Calcium
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
4
N
N
4
N
N
4
N
N
6
N
N
6
N
N
6
N
N
A
THR
308
C
THR
11
HELX_P
A
ALA
313
C
ALA
16
5
1
6
A
ARG
347
C
ARG
50
HELX_P
A
LEU
352
C
LEU
55
1
2
6
A
ASP
354
C
ASP
57
HELX_P
A
GLY
362
C
GLY
65
1
3
9
A
ASP
372
C
ASP
75
HELX_P
A
LYS
383
C
LYS
86
1
4
12
A
LEU
394
C
LEU
97
HELX_P
A
ASP
402
C
ASP
105
1
5
9
A
PRO
403
C
PRO
106
HELX_P
A
GLY
406
C
GLY
109
5
6
4
A
ASP
409
C
ASP
112
HELX_P
A
MET
416
C
MET
119
1
7
8
A
PRO
424
C
PRO
127
HELX_P
A
GLY
430
C
GLY
133
1
8
7
A
ASP
439
C
ASP
142
HELX_P
A
ASN
468
C
ASN
171
1
9
30
A
GLN
470
C
GLN
173
HELX_P
A
LEU
477
C
LEU
180
1
10
8
A
LEU
477
C
LEU
180
HELX_P
A
GLY
492
C
GLY
195
1
11
16
A
ASP
496
C
ASP
199
HELX_P
A
GLY
523
C
GLY
226
1
12
28
A
SER
530
C
SER
233
HELX_P
A
GLU
540
C
GLU
243
1
13
11
A
SER
557
C
SER
260
HELX_P
A
ALA
565
C
ALA
268
1
14
9
A
PRO
566
C
PRO
269
HELX_P
A
HIS
568
C
HIS
271
5
15
3
A
GLU
569
C
GLU
272
HELX_P
A
ILE
588
C
ILE
291
1
16
20
A
ILE
588
C
ILE
291
HELX_P
A
VAL
595
C
VAL
298
1
17
8
A
LEU
630
C
LEU
333
HELX_P
A
LYS
635
C
LYS
338
1
18
6
A
ILE
636
C
ILE
339
HELX_P
A
GLN
638
C
GLN
341
5
19
3
A
GLN
656
C
GLN
359
HELX_P
A
GLU
667
C
GLU
370
1
20
12
A
ASP
668
C
ASP
371
HELX_P
A
ARG
677
C
ARG
380
1
21
10
A
ASP
680
C
ASP
383
HELX_P
A
GLN
691
C
GLN
394
1
22
12
A
SER
693
C
SER
396
HELX_P
A
VAL
697
C
VAL
400
5
23
5
A
THR
698
C
THR
401
HELX_P
A
GLY
715
C
GLY
418
1
24
18
A
SER
717
C
SER
420
HELX_P
A
ASN
726
C
ASN
429
1
25
10
A
SER
728
C
SER
431
HELX_P
A
PHE
743
C
PHE
446
1
26
16
A
PHE
743
C
PHE
446
HELX_P
A
GLY
761
C
GLY
464
1
27
19
A
PRO
774
C
PRO
477
HELX_P
A
SER
778
C
SER
481
5
28
5
A
ASN
780
C
ASN
483
HELX_P
A
GLU
818
C
GLU
521
1
29
39
A
GLU
840
C
GLU
543
HELX_P
A
ALA
855
C
ALA
558
1
30
16
metalc
2.507
B
DG
14
A
OP1
DG
14
1_555
B
CA
101
D
CA
CA
1_555
metalc
2.288
B
CA
101
D
CA
CA
1_555
B
HOH
201
I
O
HOH
1_555
metalc
2.331
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O
POP
1_555
metalc
2.706
B
CA
101
D
CA
CA
1_555
A
POP
1001
E
O2
POP
1_555
metalc
2.579
A
ASP
354
C
OD1
ASP
57
1_555
A
CA
1004
H
CA
CA
1_555
metalc
2.970
A
GLN
356
C
OE1
GLN
59
1_555
A
CA
1004
H
CA
CA
1_555
metalc
2.451
A
ASP
830
C
OD1
ASP
533
1_555
A
CA
1002
F
CA
CA
1_555
metalc
2.760
A
GLU
831
C
OE2
GLU
534
1_555
A
CA
1002
F
CA
CA
1_555
metalc
2.766
A
LEU
858
C
O
LEU
561
1_555
A
CA
1003
G
CA
CA
1_555
metalc
2.811
A
POP
1001
E
O
POP
1_555
A
CA
1002
F
CA
CA
1_555
metalc
3.025
A
POP
1001
E
O5
POP
1_555
A
CA
1002
F
CA
CA
1_555
metalc
2.655
A
CA
1003
G
CA
CA
1_555
A
HOH
1186
K
O
HOH
1_555
metalc
2.618
A
CA
1003
G
CA
CA
1_555
A
HOH
1240
K
O
HOH
1_555
metalc
2.482
A
CA
1003
G
CA
CA
1_555
A
HOH
1257
K
O
HOH
1_555
metalc
2.605
A
CA
1003
G
CA
CA
1_555
A
HOH
1367
K
O
HOH
1_555
metalc
2.277
A
CA
1004
H
CA
CA
1_555
A
HOH
1112
K
O
HOH
1_555
metalc
2.442
A
CA
1004
H
CA
CA
1_555
A
HOH
1342
K
O
HOH
1_555
hydrog
DA-DT PAIR
B
DA
5
A
N1
DA
5
1_555
C
DT
13
B
N3
DT
13
1_555
hydrog
WATSON-CRICK
B
DC
6
A
N3
DC
6
1_555
C
DG
12
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
B
DC
6
A
N4
DC
6
1_555
C
DG
12
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
B
DC
6
A
O2
DC
6
1_555
C
DG
12
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
B
DA
7
A
N1
DA
7
1_555
C
DT
11
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
B
DA
7
A
N6
DA
7
1_555
C
DT
11
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
B
DG
8
A
N1
DG
8
1_555
C
DC
10
B
N3
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
8
A
N2
DG
8
1_555
C
DC
10
B
O2
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
8
A
O6
DG
8
1_555
C
DC
10
B
N4
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
9
A
N1
DG
9
1_555
C
DC
9
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
B
DG
9
A
N2
DG
9
1_555
C
DC
9
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
B
DG
9
A
O6
DG
9
1_555
C
DC
9
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
B
DA
10
A
N1
DA
10
1_555
C
DT
8
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
B
DA
10
A
N6
DA
10
1_555
C
DT
8
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
B
DC
11
A
N3
DC
11
1_555
C
DG
7
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
B
DC
11
A
N4
DC
11
1_555
C
DG
7
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
B
DC
11
A
O2
DC
11
1_555
C
DG
7
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
B
DT
12
A
N3
DT
12
1_555
C
DA
6
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
B
DT
12
A
O4
DT
12
1_555
C
DA
6
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
B
DC
13
A
N3
DC
13
1_555
C
DG
5
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
B
DC
13
A
N4
DC
13
1_555
C
DG
5
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
B
DC
13
A
O2
DC
13
1_555
C
DG
5
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
B
DG
14
A
N1
DG
14
1_555
C
DC
4
B
N3
DC
4
1_555
hydrog
WATSON-CRICK
B
DG
14
A
N2
DG
14
1_555
C
DC
4
B
O2
DC
4
1_555
hydrog
WATSON-CRICK
B
DG
14
A
O6
DG
14
1_555
C
DC
4
B
N4
DC
4
1_555
TRANSFERASE/DNA
DNA polymerase, polymerization fidelity, pyrophosphorolysis, purine selectivity, blunt end extension, base stacking, DNA synthesis, TRANSFERASE-DNA complex
A
GLU
620
C
GLU
323
1
A
PRO
621
C
PRO
324
2.25
D9N168_GEOSE
UNP
3
1
D9N168
KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA
VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL
ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI
LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGRLS
STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV
TPNMRRQAKAVNFGIPYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT
SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT
LRVPLKVDYHYGSTWYDAK
4DSK
PDB
1
1
4DSK
GGCTACAGGACTCG
4DSK
PDB
2
1
4DSK
TCACGAGTCCTGTAGCC
1
579
4DSK
298
876
D9N168
A
1
1
579
1
14
4DSK
1
14
4DSK
B
2
1
14
1
17
4DSK
1
17
4DSK
C
3
1
17
1
ALA
engineered mutation
ASP
598
4DSK
A
D9N168
UNP
301
301
1
PRO
engineered mutation
VAL
713
4DSK
A
D9N168
UNP
416
416
6
3
2
4
2
parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
302
C
THR
5
A
LEU
303
C
LEU
6
A
GLY
342
C
GLY
45
A
LEU
346
C
LEU
49
A
GLY
334
C
GLY
37
A
ASN
339
C
ASN
42
A
LYS
315
C
LYS
18
A
GLU
321
C
GLU
24
A
LYS
367
C
LYS
70
A
MET
370
C
MET
73
A
VAL
390
C
VAL
93
A
ASP
393
C
ASP
96
A
LYS
601
C
LYS
304
A
VAL
602
C
VAL
305
A
VAL
493
C
VAL
196
A
VAL
495
C
VAL
198
A
PHE
640
C
PHE
343
A
VAL
641
C
VAL
344
A
ILE
605
C
ILE
308
A
ASN
607
C
ASN
310
A
SER
617
C
SER
320
A
THR
619
C
THR
322
A
HIS
823
C
HIS
526
A
GLN
827
C
GLN
530
A
GLU
831
C
GLU
534
A
PRO
837
C
PRO
540
A
TRP
647
C
TRP
350
A
TYR
654
C
TYR
357
A
VAL
864
C
VAL
567
A
GLY
869
C
GLY
572
A
TYR
762
C
TYR
465
A
THR
764
C
THR
467
A
ARG
770
C
ARG
473
A
TYR
772
C
TYR
475
BINDING SITE FOR RESIDUE CA B 101
B
CA
101
Software
4
BINDING SITE FOR RESIDUE POP A 1001
A
POP
1001
Software
7
BINDING SITE FOR RESIDUE CA A 1002
A
CA
1002
Software
5
BINDING SITE FOR RESIDUE CA A 1003
A
CA
1003
Software
5
BINDING SITE FOR RESIDUE CA A 1004
A
CA
1004
Software
4
A
POP
1001
E
POP
4
1_555
A
CA
1002
F
CA
4
1_555
B
DG
14
A
DG
14
4
1_555
B
HOH
201
I
HOH
4
1_555
A
ASP
653
C
ASP
356
7
1_555
A
TYR
654
C
TYR
357
7
1_555
A
ASP
830
C
ASP
533
7
1_555
A
CA
1002
F
CA
7
1_555
A
HOH
1222
K
HOH
7
1_555
B
DG
14
A
DG
14
7
1_555
B
CA
101
D
CA
7
1_555
A
ASP
830
C
ASP
533
5
1_555
A
GLU
831
C
GLU
534
5
1_555
A
POP
1001
E
POP
5
1_555
B
DG
14
A
DG
14
5
1_555
B
CA
101
D
CA
5
1_555
A
LEU
858
C
LEU
561
5
1_555
A
HOH
1186
K
HOH
5
1_555
A
HOH
1240
K
HOH
5
1_555
A
HOH
1257
K
HOH
5
1_555
A
HOH
1367
K
HOH
5
1_555
A
ASP
354
C
ASP
57
4
1_555
A
GLN
356
C
GLN
59
4
1_555
A
HOH
1112
K
HOH
4
1_555
A
HOH
1342
K
HOH
4
1_555
19
P 21 21 21