0.011535 0.000000 0.000000 0.000000 0.010714 0.000000 0.000000 0.000000 0.009402 0.00000 0.00000 0.00000 Gan, J.H. Abdur, R. Liu, H.H. Sheng, J. Caton-Willians, J. Soares, A.S. Huang, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 86.692 93.339 106.363 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking H2 O7 P2 -2 175.959 PYROPHOSPHATE 2- non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CA N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N O N 90 N P N 91 N O N 92 N O N 93 N O N 94 N C N 95 R C N 96 N O N 97 S C N 98 N O N 99 N C N 100 R C Y 101 N N Y 102 N C Y 103 N N Y 104 N C Y 105 N C N 106 N N Y 107 N N Y 108 N C Y 109 N N Y 110 N C N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N O N 126 N P N 127 N O N 128 N O N 129 N O N 130 N C N 131 R C N 132 N O N 133 S C N 134 N O N 135 N C N 136 R C N 137 N N N 138 N C N 139 N O N 140 N N N 141 N C N 142 N N N 143 N C N 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N P N 161 N O N 162 N O N 163 N O N 164 N C N 165 R C N 166 N O N 167 S C N 168 N O N 169 N C N 170 R C Y 171 N N Y 172 N C Y 173 N N Y 174 N C N 175 N C N 176 N O N 177 N N N 178 N C N 179 N N N 180 N N Y 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N P N 198 N O N 199 N O N 200 N O N 201 N C N 202 R C N 203 N O N 204 S C N 205 N O N 206 N C N 207 R C N 208 N N N 209 N C N 210 N O N 211 N N N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N O N 240 N N N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N O N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 N C N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C Y 286 N C Y 287 N N Y 288 N C Y 289 N C Y 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N O N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 S C N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N C N 357 N N N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N C N 380 N S N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N P N 418 N O N 419 N O N 420 N O N 421 N O N 422 N P N 423 N O N 424 N O N 425 N O N 426 N H N 427 N H N 428 N N N 429 S C N 430 N C N 431 N O N 432 N C N 433 N C N 434 N C N 435 N O N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N N N 446 S C N 447 N C N 448 N O N 449 N C N 450 N O N 451 N O N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N N N 460 S C N 461 N C N 462 N O N 463 R C N 464 N O N 465 N C N 466 N O N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N N N 477 S C N 478 N C N 479 N O N 480 N C Y 481 N C Y 482 N C Y 483 N C Y 484 N N Y 485 N C Y 486 N C Y 487 N C Y 488 N C Y 489 N C N 490 N O N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N N N 504 S C N 505 N C N 506 N O N 507 N C Y 508 N C Y 509 N C Y 510 N C Y 511 N C Y 512 N C Y 513 N C N 514 N O N 515 N O N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N N N 528 S C N 529 N C N 530 N O N 531 N C N 532 N C N 533 N C N 534 N O N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N doub N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N doub N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N doub N 472 N sing N 473 N sing N 474 N sing N 475 N sing Y 476 N doub Y 477 N sing Y 478 N sing N 479 N sing Y 480 N doub Y 481 N sing Y 482 N sing N 483 N sing Y 484 N sing Y 485 N doub N 486 N sing Y 487 N doub N 488 N sing Y 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N doub N 500 N sing N 501 N sing N 502 N sing N 503 N sing Y 504 N doub Y 505 N sing Y 506 N sing N 507 N sing Y 508 N doub N 509 N sing Y 510 N doub N 511 N sing Y 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N doub N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing To be Published 0353 Biochemical and structural insights into the fidelity of bacillus stearothermophilus DNA polymerase 10.2210/pdb4dsk/pdb pdb_00004dsk 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2011-06-27 ADSC QUANTUM 4 mirror SINGLE WAVELENGTH M x-ray 1 1.0000 1.0 X12B NSLS 1.0000 SYNCHROTRON NSLS BEAMLINE X12B 4305.805 DNA (5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*CP*G)-3') 1 syn polymer 5163.348 DNA (5'-D(*TP*CP*AP*CP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3') 1 syn polymer 66101.766 DNA polymerase 2.7.7.7 RESIDUES 298-876 A598D 1 man polymer 40.078 CALCIUM ION 4 syn non-polymer 175.959 PYROPHOSPHATE 2- 1 syn non-polymer 18.015 water 300 nat water no no (DG)(DG)(DC)(DT)(DA)(DC)(DA)(DG)(DG)(DA)(DC)(DT)(DC)(DG) GGCTACAGGACTCG B polydeoxyribonucleotide no no (DT)(DC)(DA)(DC)(DG)(DA)(DG)(DT)(DC)(DC)(DT)(DG)(DT)(DA)(DG)(DC)(DC) TCACGAGTCCTGTAGCC C polydeoxyribonucleotide no no KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLS STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV TPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT LRVPLKVDYHYGSTWYDAK KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRLS STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV TPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT LRVPLKVDYHYGSTWYDAK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample DPO1 1422 Geobacillus stearothermophilus 562 Escherichia coli BL21 (DE3) Plasmid pET28 1 2.85 56.80 VAPOR DIFFUSION, SITTING DROP 6.5 0.2 M calcium acetate, 0.1 M sodium cacodylate (pH 6.5), 18% v/v PEG8000, VAPOR DIFFUSION, SITTING DROP -8.092 B 5 C 13 5.185 B_DA5:DT13_C 1 -5.206 -0.189 0.099 0.211 -0.699 1 19 B 6 C 12 -5.754 B_DC6:DG12_C 2 -6.388 -0.037 -0.156 0.038 0.266 1 20 B 7 C 11 -0.836 B_DA7:DT11_C 3 -6.837 0.233 -0.235 -0.351 3.158 1 19 B 8 C 10 0.920 B_DG8:DC10_C 4 -11.221 0.265 0.089 -0.110 -5.060 1 19 B 9 C 9 -5.668 B_DG9:DC9_C 5 -13.812 -0.051 -0.457 -0.066 -9.707 1 20 B 10 C 8 -3.094 B_DA10:DT8_C 6 -10.460 0.201 0.006 -0.047 -0.327 1 19 B 11 C 7 -1.468 B_DC11:DG7_C 7 -5.616 0.331 -0.144 -0.204 11.853 1 20 B 12 C 6 4.954 B_DT12:DA6_C 8 -10.352 -0.094 -0.164 -0.196 12.184 1 19 B 13 C 5 2.718 B_DC13:DG5_C 9 -10.363 0.323 -0.214 -0.163 8.022 1 19 B 14 C 4 5.179 B_DG14:DC4_C 10 -7.458 0.013 0.031 -0.174 3.105 32.849 B B 5 6 1.338 C C 13 12 3.136 0.756 -0.388 -0.251 BB_DA5DC6:DG12DT13_CC 1 1.748 -3.092 32.795 -0.567 0.972 3.370 37.098 B B 6 7 12.577 C C 12 11 3.341 7.944 -0.684 0.501 BB_DC6DA7:DT11DG12_CC 2 0.131 -0.207 36.266 -0.316 1.093 3.168 35.521 B B 7 8 -0.412 C C 11 10 3.195 -0.251 -0.022 0.201 BB_DA7DG8:DC10DT11_CC 3 -4.902 8.059 35.191 0.365 -0.664 3.427 32.808 B B 8 9 15.903 C C 10 9 3.628 8.840 0.140 -0.190 BB_DG8DG9:DC9DC10_CC 4 5.184 -9.326 31.208 -2.017 0.738 3.111 36.674 B B 9 10 3.252 C C 9 8 3.206 2.039 0.335 -0.328 BB_DG9DA10:DT8DC9_CC 5 -5.048 8.050 36.282 -0.792 -1.203 3.195 33.027 B B 10 11 2.644 C C 8 7 3.182 1.500 0.696 -0.746 BB_DA10DC11:DG7DT8_CC 6 2.994 -5.275 32.862 -1.560 -0.729 2.445 32.537 B B 11 12 19.505 C C 7 6 3.114 10.729 0.232 -1.512 BB_DC11DT12:DA6DG7_CC 7 -1.735 3.154 30.715 -4.339 -0.679 2.598 27.316 B B 12 13 23.156 C C 6 5 3.471 10.655 -0.384 -1.594 BB_DT12DC13:DG5DA6_CC 8 -0.326 0.709 25.186 -5.939 0.735 2.718 33.265 B B 13 14 23.915 C C 5 4 3.530 13.312 -0.507 -1.431 BB_DC13DG14:DC4DG5_CC 9 -2.604 4.677 30.445 -4.724 0.451 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2013-03-27 1 1 2023-09-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus V713P mutant bound to G:dCTP Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus wuth duplex DNA, Se-dGTP and Calcium DNA polymerase I from Bacillus stearothermophilus wuth duplex DNA, dGTP and Calcium Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium RCSB Y RCSB 2012-02-19 REL REL CA CALCIUM ION POP PYROPHOSPHATE 2- HOH water Synthesized DNA sample Synthesized DNA sample 3HT3 PDB experimental model CA 2 4 CA CA 101 B POP 1001 5 POP POP 1001 A CA 1 4 CA CA 1002 A CA 3 4 CA CA 1003 A CA 4 4 CA CA 1004 A HOH 1 6 HOH HOH 201 B HOH 94 6 HOH HOH 202 B HOH 161 6 HOH HOH 203 B HOH 186 6 HOH HOH 204 B HOH 201 6 HOH HOH 205 B HOH 235 6 HOH HOH 206 B HOH 330 6 HOH HOH 207 B HOH 342 6 HOH HOH 208 B HOH 343 6 HOH HOH 209 B HOH 344 6 HOH HOH 210 B HOH 345 6 HOH HOH 211 B HOH 346 6 HOH HOH 212 B HOH 351 6 HOH HOH 213 B HOH 352 6 HOH HOH 214 B HOH 353 6 HOH HOH 215 B HOH 26 6 HOH HOH 101 C HOH 58 6 HOH HOH 102 C HOH 87 6 HOH HOH 103 C HOH 138 6 HOH HOH 104 C HOH 148 6 HOH HOH 105 C HOH 233 6 HOH HOH 106 C HOH 241 6 HOH HOH 107 C HOH 347 6 HOH HOH 108 C HOH 348 6 HOH HOH 109 C HOH 349 6 HOH HOH 110 C HOH 356 6 HOH HOH 111 C HOH 358 6 HOH HOH 112 C HOH 198 6 HOH HOH 1101 A HOH 202 6 HOH HOH 1102 A HOH 2 6 HOH HOH 1103 A HOH 3 6 HOH HOH 1104 A HOH 4 6 HOH HOH 1105 A HOH 5 6 HOH HOH 1106 A HOH 6 6 HOH HOH 1107 A HOH 7 6 HOH HOH 1108 A HOH 8 6 HOH HOH 1109 A HOH 9 6 HOH HOH 1110 A HOH 10 6 HOH HOH 1111 A HOH 11 6 HOH HOH 1112 A HOH 12 6 HOH HOH 1113 A HOH 13 6 HOH HOH 1114 A HOH 14 6 HOH HOH 1115 A HOH 15 6 HOH HOH 1116 A HOH 16 6 HOH HOH 1117 A HOH 17 6 HOH HOH 1118 A HOH 18 6 HOH HOH 1119 A HOH 19 6 HOH HOH 1120 A HOH 20 6 HOH HOH 1121 A HOH 21 6 HOH HOH 1122 A HOH 22 6 HOH HOH 1123 A HOH 23 6 HOH HOH 1124 A HOH 24 6 HOH HOH 1125 A HOH 25 6 HOH HOH 1126 A HOH 27 6 HOH HOH 1127 A HOH 28 6 HOH HOH 1128 A HOH 29 6 HOH HOH 1129 A HOH 30 6 HOH HOH 1130 A HOH 31 6 HOH HOH 1131 A HOH 32 6 HOH HOH 1132 A HOH 33 6 HOH HOH 1133 A HOH 34 6 HOH HOH 1134 A HOH 35 6 HOH HOH 1135 A HOH 36 6 HOH HOH 1136 A HOH 37 6 HOH HOH 1137 A HOH 38 6 HOH HOH 1138 A HOH 39 6 HOH HOH 1139 A HOH 40 6 HOH HOH 1140 A HOH 41 6 HOH HOH 1141 A HOH 42 6 HOH HOH 1142 A HOH 43 6 HOH HOH 1143 A HOH 44 6 HOH HOH 1144 A HOH 45 6 HOH HOH 1145 A HOH 46 6 HOH HOH 1146 A HOH 47 6 HOH HOH 1147 A HOH 48 6 HOH HOH 1148 A HOH 49 6 HOH HOH 1149 A HOH 50 6 HOH HOH 1150 A HOH 51 6 HOH HOH 1151 A HOH 52 6 HOH HOH 1152 A HOH 53 6 HOH HOH 1153 A HOH 54 6 HOH HOH 1154 A HOH 55 6 HOH HOH 1155 A HOH 56 6 HOH HOH 1156 A HOH 57 6 HOH HOH 1157 A HOH 59 6 HOH HOH 1158 A HOH 60 6 HOH HOH 1159 A HOH 61 6 HOH HOH 1160 A HOH 62 6 HOH HOH 1161 A HOH 63 6 HOH HOH 1162 A HOH 64 6 HOH HOH 1163 A HOH 65 6 HOH HOH 1164 A HOH 66 6 HOH HOH 1165 A HOH 67 6 HOH HOH 1166 A HOH 68 6 HOH HOH 1167 A HOH 69 6 HOH HOH 1168 A HOH 70 6 HOH HOH 1169 A HOH 71 6 HOH HOH 1170 A HOH 72 6 HOH HOH 1171 A HOH 73 6 HOH HOH 1172 A HOH 74 6 HOH HOH 1173 A HOH 75 6 HOH HOH 1174 A HOH 76 6 HOH HOH 1175 A HOH 77 6 HOH HOH 1176 A HOH 78 6 HOH HOH 1177 A HOH 79 6 HOH HOH 1178 A HOH 80 6 HOH HOH 1179 A HOH 81 6 HOH HOH 1180 A HOH 82 6 HOH HOH 1181 A HOH 83 6 HOH HOH 1182 A HOH 84 6 HOH HOH 1183 A HOH 85 6 HOH HOH 1184 A HOH 86 6 HOH HOH 1185 A HOH 88 6 HOH HOH 1186 A HOH 89 6 HOH HOH 1187 A HOH 90 6 HOH HOH 1188 A HOH 91 6 HOH HOH 1189 A HOH 92 6 HOH HOH 1190 A HOH 93 6 HOH HOH 1191 A HOH 95 6 HOH HOH 1192 A HOH 96 6 HOH HOH 1193 A HOH 97 6 HOH HOH 1194 A HOH 98 6 HOH HOH 1195 A HOH 99 6 HOH HOH 1196 A HOH 100 6 HOH HOH 1197 A HOH 123 6 HOH HOH 1198 A HOH 124 6 HOH HOH 1199 A HOH 125 6 HOH HOH 1200 A HOH 127 6 HOH HOH 1201 A HOH 128 6 HOH HOH 1202 A HOH 130 6 HOH HOH 1203 A HOH 131 6 HOH HOH 1204 A HOH 134 6 HOH HOH 1205 A HOH 135 6 HOH HOH 1206 A HOH 136 6 HOH HOH 1207 A HOH 137 6 HOH HOH 1208 A HOH 139 6 HOH HOH 1209 A HOH 140 6 HOH HOH 1210 A HOH 141 6 HOH HOH 1211 A HOH 143 6 HOH HOH 1212 A HOH 145 6 HOH HOH 1213 A HOH 146 6 HOH HOH 1214 A HOH 147 6 HOH HOH 1215 A HOH 149 6 HOH HOH 1216 A HOH 151 6 HOH HOH 1217 A HOH 154 6 HOH HOH 1218 A HOH 155 6 HOH HOH 1219 A HOH 157 6 HOH HOH 1220 A HOH 159 6 HOH HOH 1221 A HOH 162 6 HOH HOH 1222 A HOH 164 6 HOH HOH 1223 A HOH 165 6 HOH HOH 1224 A HOH 166 6 HOH HOH 1225 A HOH 167 6 HOH HOH 1226 A HOH 168 6 HOH HOH 1227 A HOH 169 6 HOH HOH 1228 A HOH 173 6 HOH HOH 1229 A HOH 175 6 HOH HOH 1230 A HOH 176 6 HOH HOH 1231 A HOH 177 6 HOH HOH 1232 A HOH 178 6 HOH HOH 1233 A HOH 179 6 HOH HOH 1234 A HOH 180 6 HOH HOH 1235 A HOH 181 6 HOH HOH 1236 A HOH 182 6 HOH HOH 1237 A HOH 183 6 HOH HOH 1238 A HOH 184 6 HOH HOH 1239 A HOH 185 6 HOH HOH 1240 A HOH 187 6 HOH HOH 1241 A HOH 188 6 HOH HOH 1242 A HOH 189 6 HOH HOH 1243 A HOH 190 6 HOH HOH 1244 A HOH 192 6 HOH HOH 1245 A HOH 193 6 HOH HOH 1246 A HOH 194 6 HOH HOH 1247 A HOH 195 6 HOH HOH 1248 A HOH 196 6 HOH HOH 1249 A HOH 197 6 HOH HOH 1250 A HOH 199 6 HOH HOH 1251 A HOH 200 6 HOH HOH 1252 A HOH 204 6 HOH HOH 1253 A HOH 205 6 HOH HOH 1254 A HOH 207 6 HOH HOH 1255 A HOH 209 6 HOH HOH 1256 A HOH 211 6 HOH HOH 1257 A HOH 212 6 HOH HOH 1258 A HOH 213 6 HOH HOH 1259 A HOH 216 6 HOH HOH 1260 A HOH 217 6 HOH HOH 1261 A HOH 218 6 HOH HOH 1262 A HOH 221 6 HOH HOH 1263 A HOH 224 6 HOH HOH 1264 A HOH 225 6 HOH HOH 1265 A HOH 226 6 HOH HOH 1266 A HOH 231 6 HOH HOH 1267 A HOH 232 6 HOH HOH 1268 A HOH 234 6 HOH HOH 1269 A HOH 236 6 HOH HOH 1270 A HOH 237 6 HOH HOH 1271 A HOH 238 6 HOH HOH 1272 A HOH 239 6 HOH HOH 1273 A HOH 240 6 HOH HOH 1274 A HOH 242 6 HOH HOH 1275 A HOH 243 6 HOH HOH 1276 A HOH 244 6 HOH HOH 1277 A HOH 245 6 HOH HOH 1278 A HOH 248 6 HOH HOH 1279 A HOH 249 6 HOH HOH 1280 A HOH 250 6 HOH HOH 1281 A HOH 251 6 HOH HOH 1282 A HOH 252 6 HOH HOH 1283 A HOH 254 6 HOH HOH 1284 A HOH 255 6 HOH HOH 1285 A HOH 257 6 HOH HOH 1286 A HOH 258 6 HOH HOH 1287 A HOH 259 6 HOH HOH 1288 A HOH 260 6 HOH HOH 1289 A HOH 261 6 HOH HOH 1290 A HOH 262 6 HOH HOH 1291 A HOH 263 6 HOH HOH 1292 A HOH 264 6 HOH HOH 1293 A HOH 265 6 HOH HOH 1294 A HOH 266 6 HOH HOH 1295 A HOH 267 6 HOH HOH 1296 A HOH 268 6 HOH HOH 1297 A HOH 269 6 HOH HOH 1298 A HOH 270 6 HOH HOH 1299 A HOH 271 6 HOH HOH 1300 A HOH 272 6 HOH HOH 1301 A HOH 273 6 HOH HOH 1302 A HOH 274 6 HOH HOH 1303 A HOH 275 6 HOH HOH 1304 A HOH 276 6 HOH HOH 1305 A HOH 277 6 HOH HOH 1306 A HOH 278 6 HOH HOH 1307 A HOH 279 6 HOH HOH 1308 A HOH 280 6 HOH HOH 1309 A HOH 281 6 HOH HOH 1310 A HOH 282 6 HOH HOH 1311 A HOH 283 6 HOH HOH 1312 A HOH 284 6 HOH HOH 1313 A HOH 285 6 HOH HOH 1314 A HOH 286 6 HOH HOH 1315 A HOH 287 6 HOH HOH 1316 A HOH 288 6 HOH HOH 1317 A HOH 289 6 HOH HOH 1318 A HOH 290 6 HOH HOH 1319 A HOH 291 6 HOH HOH 1320 A HOH 292 6 HOH HOH 1321 A HOH 293 6 HOH HOH 1322 A HOH 294 6 HOH HOH 1323 A HOH 295 6 HOH HOH 1324 A HOH 296 6 HOH HOH 1325 A HOH 297 6 HOH HOH 1326 A HOH 298 6 HOH HOH 1327 A HOH 301 6 HOH HOH 1328 A HOH 302 6 HOH HOH 1329 A HOH 303 6 HOH HOH 1330 A HOH 304 6 HOH HOH 1331 A HOH 305 6 HOH HOH 1332 A HOH 306 6 HOH HOH 1333 A HOH 307 6 HOH HOH 1334 A HOH 308 6 HOH HOH 1335 A HOH 309 6 HOH HOH 1336 A HOH 310 6 HOH HOH 1337 A HOH 311 6 HOH HOH 1338 A HOH 312 6 HOH HOH 1339 A HOH 313 6 HOH HOH 1340 A HOH 314 6 HOH HOH 1341 A HOH 315 6 HOH HOH 1342 A HOH 316 6 HOH HOH 1343 A HOH 317 6 HOH HOH 1344 A HOH 318 6 HOH HOH 1345 A HOH 319 6 HOH HOH 1346 A HOH 320 6 HOH HOH 1347 A HOH 321 6 HOH HOH 1348 A HOH 322 6 HOH HOH 1349 A HOH 323 6 HOH HOH 1350 A HOH 324 6 HOH HOH 1351 A HOH 325 6 HOH HOH 1352 A HOH 326 6 HOH HOH 1353 A HOH 327 6 HOH HOH 1354 A HOH 328 6 HOH HOH 1355 A HOH 329 6 HOH HOH 1356 A HOH 331 6 HOH HOH 1357 A HOH 332 6 HOH HOH 1358 A HOH 333 6 HOH HOH 1359 A HOH 334 6 HOH HOH 1360 A HOH 335 6 HOH HOH 1361 A HOH 336 6 HOH HOH 1362 A HOH 337 6 HOH HOH 1363 A HOH 338 6 HOH HOH 1364 A HOH 339 6 HOH HOH 1365 A HOH 340 6 HOH HOH 1366 A HOH 341 6 HOH HOH 1367 A HOH 354 6 HOH HOH 1368 A HOH 355 6 HOH HOH 1369 A HOH 357 6 HOH HOH 1370 A HOH 359 6 HOH HOH 1371 A HOH 360 6 HOH HOH 1372 A HOH 361 6 HOH HOH 1373 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B DA 5 n 5 DA 5 B DC 6 n 6 DC 6 B DA 7 n 7 DA 7 B DG 8 n 8 DG 8 B DG 9 n 9 DG 9 B DA 10 n 10 DA 10 B DC 11 n 11 DC 11 B DT 12 n 12 DT 12 B DC 13 n 13 DC 13 B DG 14 n 14 DG 14 B n 1 1 C DC 2 n 2 DC 2 C DA 3 n 3 DA 3 C DC 4 n 4 DC 4 C DG 5 n 5 DG 5 C DA 6 n 6 DA 6 C DG 7 n 7 DG 7 C DT 8 n 8 DT 8 C DC 9 n 9 DC 9 C DC 10 n 10 DC 10 C DT 11 n 11 DT 11 C DG 12 n 12 DG 12 C DT 13 n 13 DT 13 C DA 14 n 14 DA 14 C DG 15 n 15 DG 15 C DC 16 n 16 DC 16 C n 17 17 C LYS 298 n 1 LYS 298 A MET 299 n 2 MET 299 A ALA 300 n 3 ALA 300 A PHE 301 n 4 PHE 301 A THR 302 n 5 THR 302 A LEU 303 n 6 LEU 303 A ALA 304 n 7 ALA 304 A ASP 305 n 8 ASP 305 A ARG 306 n 9 ARG 306 A VAL 307 n 10 VAL 307 A THR 308 n 11 THR 308 A GLU 309 n 12 GLU 309 A GLU 310 n 13 GLU 310 A MET 311 n 14 MET 311 A LEU 312 n 15 LEU 312 A ALA 313 n 16 ALA 313 A ASP 314 n 17 ASP 314 A LYS 315 n 18 LYS 315 A ALA 316 n 19 ALA 316 A ALA 317 n 20 ALA 317 A LEU 318 n 21 LEU 318 A VAL 319 n 22 VAL 319 A VAL 320 n 23 VAL 320 A GLU 321 n 24 GLU 321 A VAL 322 n 25 VAL 322 A VAL 323 n 26 VAL 323 A GLU 324 n 27 GLU 324 A GLU 325 n 28 GLU 325 A ASN 326 n 29 ASN 326 A TYR 327 n 30 TYR 327 A HIS 328 n 31 HIS 328 A ASP 329 n 32 ASP 329 A ALA 330 n 33 ALA 330 A PRO 331 n 34 PRO 331 A ILE 332 n 35 ILE 332 A VAL 333 n 36 VAL 333 A GLY 334 n 37 GLY 334 A ILE 335 n 38 ILE 335 A ALA 336 n 39 ALA 336 A VAL 337 n 40 VAL 337 A VAL 338 n 41 VAL 338 A ASN 339 n 42 ASN 339 A GLU 340 n 43 GLU 340 A HIS 341 n 44 HIS 341 A GLY 342 n 45 GLY 342 A ARG 343 n 46 ARG 343 A PHE 344 n 47 PHE 344 A PHE 345 n 48 PHE 345 A LEU 346 n 49 LEU 346 A ARG 347 n 50 ARG 347 A PRO 348 n 51 PRO 348 A GLU 349 n 52 GLU 349 A THR 350 n 53 THR 350 A ALA 351 n 54 ALA 351 A LEU 352 n 55 LEU 352 A ALA 353 n 56 ALA 353 A ASP 354 n 57 ASP 354 A PRO 355 n 58 PRO 355 A GLN 356 n 59 GLN 356 A PHE 357 n 60 PHE 357 A VAL 358 n 61 VAL 358 A ALA 359 n 62 ALA 359 A TRP 360 n 63 TRP 360 A LEU 361 n 64 LEU 361 A GLY 362 n 65 GLY 362 A ASP 363 n 66 ASP 363 A GLU 364 n 67 GLU 364 A THR 365 n 68 THR 365 A LYS 366 n 69 LYS 366 A LYS 367 n 70 LYS 367 A LYS 368 n 71 LYS 368 A SER 369 n 72 SER 369 A MET 370 n 73 MET 370 A PHE 371 n 74 PHE 371 A ASP 372 n 75 ASP 372 A SER 373 n 76 SER 373 A LYS 374 n 77 LYS 374 A ARG 375 n 78 ARG 375 A ALA 376 n 79 ALA 376 A ALA 377 n 80 ALA 377 A VAL 378 n 81 VAL 378 A ALA 379 n 82 ALA 379 A LEU 380 n 83 LEU 380 A LYS 381 n 84 LYS 381 A TRP 382 n 85 TRP 382 A LYS 383 n 86 LYS 383 A GLY 384 n 87 GLY 384 A ILE 385 n 88 ILE 385 A GLU 386 n 89 GLU 386 A LEU 387 n 90 LEU 387 A CYS 388 n 91 CYS 388 A GLY 389 n 92 GLY 389 A VAL 390 n 93 VAL 390 A SER 391 n 94 SER 391 A PHE 392 n 95 PHE 392 A ASP 393 n 96 ASP 393 A LEU 394 n 97 LEU 394 A LEU 395 n 98 LEU 395 A LEU 396 n 99 LEU 396 A ALA 397 n 100 ALA 397 A ALA 398 n 101 ALA 398 A TYR 399 n 102 TYR 399 A LEU 400 n 103 LEU 400 A LEU 401 n 104 LEU 401 A ASP 402 n 105 ASP 402 A PRO 403 n 106 PRO 403 A ALA 404 n 107 ALA 404 A GLN 405 n 108 GLN 405 A GLY 406 n 109 GLY 406 A VAL 407 n 110 VAL 407 A ASP 408 n 111 ASP 408 A ASP 409 n 112 ASP 409 A VAL 410 n 113 VAL 410 A ALA 411 n 114 ALA 411 A ALA 412 n 115 ALA 412 A ALA 413 n 116 ALA 413 A ALA 414 n 117 ALA 414 A LYS 415 n 118 LYS 415 A MET 416 n 119 MET 416 A LYS 417 n 120 LYS 417 A GLN 418 n 121 GLN 418 A TYR 419 n 122 TYR 419 A GLU 420 n 123 GLU 420 A ALA 421 n 124 ALA 421 A VAL 422 n 125 VAL 422 A ARG 423 n 126 ARG 423 A PRO 424 n 127 PRO 424 A ASP 425 n 128 ASP 425 A GLU 426 n 129 GLU 426 A ALA 427 n 130 ALA 427 A VAL 428 n 131 VAL 428 A TYR 429 n 132 TYR 429 A GLY 430 n 133 GLY 430 A LYS 431 n 134 LYS 431 A GLY 432 n 135 GLY 432 A ALA 433 n 136 ALA 433 A LYS 434 n 137 LYS 434 A ARG 435 n 138 ARG 435 A ALA 436 n 139 ALA 436 A VAL 437 n 140 VAL 437 A PRO 438 n 141 PRO 438 A ASP 439 n 142 ASP 439 A GLU 440 n 143 GLU 440 A PRO 441 n 144 PRO 441 A VAL 442 n 145 VAL 442 A LEU 443 n 146 LEU 443 A ALA 444 n 147 ALA 444 A GLU 445 n 148 GLU 445 A HIS 446 n 149 HIS 446 A LEU 447 n 150 LEU 447 A VAL 448 n 151 VAL 448 A ARG 449 n 152 ARG 449 A LYS 450 n 153 LYS 450 A ALA 451 n 154 ALA 451 A ALA 452 n 155 ALA 452 A ALA 453 n 156 ALA 453 A ILE 454 n 157 ILE 454 A TRP 455 n 158 TRP 455 A GLU 456 n 159 GLU 456 A LEU 457 n 160 LEU 457 A GLU 458 n 161 GLU 458 A ARG 459 n 162 ARG 459 A PRO 460 n 163 PRO 460 A PHE 461 n 164 PHE 461 A LEU 462 n 165 LEU 462 A ASP 463 n 166 ASP 463 A GLU 464 n 167 GLU 464 A LEU 465 n 168 LEU 465 A ARG 466 n 169 ARG 466 A ARG 467 n 170 ARG 467 A ASN 468 n 171 ASN 468 A GLU 469 n 172 GLU 469 A GLN 470 n 173 GLN 470 A ASP 471 n 174 ASP 471 A ARG 472 n 175 ARG 472 A LEU 473 n 176 LEU 473 A LEU 474 n 177 LEU 474 A VAL 475 n 178 VAL 475 A GLU 476 n 179 GLU 476 A LEU 477 n 180 LEU 477 A GLU 478 n 181 GLU 478 A GLN 479 n 182 GLN 479 A PRO 480 n 183 PRO 480 A LEU 481 n 184 LEU 481 A SER 482 n 185 SER 482 A SER 483 n 186 SER 483 A ILE 484 n 187 ILE 484 A LEU 485 n 188 LEU 485 A ALA 486 n 189 ALA 486 A GLU 487 n 190 GLU 487 A MET 488 n 191 MET 488 A GLU 489 n 192 GLU 489 A PHE 490 n 193 PHE 490 A ALA 491 n 194 ALA 491 A GLY 492 n 195 GLY 492 A VAL 493 n 196 VAL 493 A LYS 494 n 197 LYS 494 A VAL 495 n 198 VAL 495 A ASP 496 n 199 ASP 496 A THR 497 n 200 THR 497 A LYS 498 n 201 LYS 498 A ARG 499 n 202 ARG 499 A LEU 500 n 203 LEU 500 A GLU 501 n 204 GLU 501 A GLN 502 n 205 GLN 502 A MET 503 n 206 MET 503 A GLY 504 n 207 GLY 504 A LYS 505 n 208 LYS 505 A GLU 506 n 209 GLU 506 A LEU 507 n 210 LEU 507 A ALA 508 n 211 ALA 508 A GLU 509 n 212 GLU 509 A GLN 510 n 213 GLN 510 A LEU 511 n 214 LEU 511 A GLY 512 n 215 GLY 512 A THR 513 n 216 THR 513 A VAL 514 n 217 VAL 514 A GLU 515 n 218 GLU 515 A GLN 516 n 219 GLN 516 A ARG 517 n 220 ARG 517 A ILE 518 n 221 ILE 518 A TYR 519 n 222 TYR 519 A GLU 520 n 223 GLU 520 A LEU 521 n 224 LEU 521 A ALA 522 n 225 ALA 522 A GLY 523 n 226 GLY 523 A GLN 524 n 227 GLN 524 A GLU 525 n 228 GLU 525 A PHE 526 n 229 PHE 526 A ASN 527 n 230 ASN 527 A ILE 528 n 231 ILE 528 A ASN 529 n 232 ASN 529 A SER 530 n 233 SER 530 A PRO 531 n 234 PRO 531 A LYS 532 n 235 LYS 532 A GLN 533 n 236 GLN 533 A LEU 534 n 237 LEU 534 A GLY 535 n 238 GLY 535 A VAL 536 n 239 VAL 536 A ILE 537 n 240 ILE 537 A LEU 538 n 241 LEU 538 A PHE 539 n 242 PHE 539 A GLU 540 n 243 GLU 540 A LYS 541 n 244 LYS 541 A LEU 542 n 245 LEU 542 A GLN 543 n 246 GLN 543 A LEU 544 n 247 LEU 544 A PRO 545 n 248 PRO 545 A VAL 546 n 249 VAL 546 A LEU 547 n 250 LEU 547 A LYS 548 n 251 LYS 548 A n 252 549 A n 253 550 A n 254 551 A n 255 552 A GLY 553 n 256 GLY 553 A TYR 554 n 257 TYR 554 A SER 555 n 258 SER 555 A THR 556 n 259 THR 556 A SER 557 n 260 SER 557 A ALA 558 n 261 ALA 558 A ASP 559 n 262 ASP 559 A VAL 560 n 263 VAL 560 A LEU 561 n 264 LEU 561 A GLU 562 n 265 GLU 562 A LYS 563 n 266 LYS 563 A LEU 564 n 267 LEU 564 A ALA 565 n 268 ALA 565 A PRO 566 n 269 PRO 566 A TYR 567 n 270 TYR 567 A HIS 568 n 271 HIS 568 A GLU 569 n 272 GLU 569 A ILE 570 n 273 ILE 570 A VAL 571 n 274 VAL 571 A GLU 572 n 275 GLU 572 A ASN 573 n 276 ASN 573 A ILE 574 n 277 ILE 574 A LEU 575 n 278 LEU 575 A HIS 576 n 279 HIS 576 A TYR 577 n 280 TYR 577 A ARG 578 n 281 ARG 578 A GLN 579 n 282 GLN 579 A LEU 580 n 283 LEU 580 A GLY 581 n 284 GLY 581 A LYS 582 n 285 LYS 582 A LEU 583 n 286 LEU 583 A GLN 584 n 287 GLN 584 A SER 585 n 288 SER 585 A THR 586 n 289 THR 586 A TYR 587 n 290 TYR 587 A ILE 588 n 291 ILE 588 A GLU 589 n 292 GLU 589 A GLY 590 n 293 GLY 590 A LEU 591 n 294 LEU 591 A LEU 592 n 295 LEU 592 A LYS 593 n 296 LYS 593 A VAL 594 n 297 VAL 594 A VAL 595 n 298 VAL 595 A ARG 596 n 299 ARG 596 A PRO 597 n 300 PRO 597 A ASP 598 n 301 ASP 598 A THR 599 n 302 THR 599 A LYS 600 n 303 LYS 600 A LYS 601 n 304 LYS 601 A VAL 602 n 305 VAL 602 A HIS 603 n 306 HIS 603 A THR 604 n 307 THR 604 A ILE 605 n 308 ILE 605 A PHE 606 n 309 PHE 606 A ASN 607 n 310 ASN 607 A GLN 608 n 311 GLN 608 A ALA 609 n 312 ALA 609 A LEU 610 n 313 LEU 610 A THR 611 n 314 THR 611 A GLN 612 n 315 GLN 612 A THR 613 n 316 THR 613 A GLY 614 n 317 GLY 614 A ARG 615 n 318 ARG 615 A LEU 616 n 319 LEU 616 A SER 617 n 320 SER 617 A SER 618 n 321 SER 618 A THR 619 n 322 THR 619 A GLU 620 n 323 GLU 620 A PRO 621 n 324 PRO 621 A ASN 622 n 325 ASN 622 A LEU 623 n 326 LEU 623 A GLN 624 n 327 GLN 624 A ASN 625 n 328 ASN 625 A ILE 626 n 329 ILE 626 A PRO 627 n 330 PRO 627 A ILE 628 n 331 ILE 628 A ARG 629 n 332 ARG 629 A LEU 630 n 333 LEU 630 A GLU 631 n 334 GLU 631 A GLU 632 n 335 GLU 632 A GLY 633 n 336 GLY 633 A ARG 634 n 337 ARG 634 A LYS 635 n 338 LYS 635 A ILE 636 n 339 ILE 636 A ARG 637 n 340 ARG 637 A GLN 638 n 341 GLN 638 A ALA 639 n 342 ALA 639 A PHE 640 n 343 PHE 640 A VAL 641 n 344 VAL 641 A PRO 642 n 345 PRO 642 A SER 643 n 346 SER 643 A GLU 644 n 347 GLU 644 A SER 645 n 348 SER 645 A ASP 646 n 349 ASP 646 A TRP 647 n 350 TRP 647 A LEU 648 n 351 LEU 648 A ILE 649 n 352 ILE 649 A PHE 650 n 353 PHE 650 A ALA 651 n 354 ALA 651 A ALA 652 n 355 ALA 652 A ASP 653 n 356 ASP 653 A TYR 654 n 357 TYR 654 A SER 655 n 358 SER 655 A GLN 656 n 359 GLN 656 A ILE 657 n 360 ILE 657 A GLU 658 n 361 GLU 658 A LEU 659 n 362 LEU 659 A ARG 660 n 363 ARG 660 A VAL 661 n 364 VAL 661 A LEU 662 n 365 LEU 662 A ALA 663 n 366 ALA 663 A HIS 664 n 367 HIS 664 A ILE 665 n 368 ILE 665 A ALA 666 n 369 ALA 666 A GLU 667 n 370 GLU 667 A ASP 668 n 371 ASP 668 A ASP 669 n 372 ASP 669 A ASN 670 n 373 ASN 670 A LEU 671 n 374 LEU 671 A MET 672 n 375 MET 672 A GLU 673 n 376 GLU 673 A ALA 674 n 377 ALA 674 A PHE 675 n 378 PHE 675 A ARG 676 n 379 ARG 676 A ARG 677 n 380 ARG 677 A ASP 678 n 381 ASP 678 A LEU 679 n 382 LEU 679 A ASP 680 n 383 ASP 680 A ILE 681 n 384 ILE 681 A HIS 682 n 385 HIS 682 A THR 683 n 386 THR 683 A LYS 684 n 387 LYS 684 A THR 685 n 388 THR 685 A ALA 686 n 389 ALA 686 A MET 687 n 390 MET 687 A ASP 688 n 391 ASP 688 A ILE 689 n 392 ILE 689 A PHE 690 n 393 PHE 690 A GLN 691 n 394 GLN 691 A VAL 692 n 395 VAL 692 A SER 693 n 396 SER 693 A GLU 694 n 397 GLU 694 A ASP 695 n 398 ASP 695 A GLU 696 n 399 GLU 696 A VAL 697 n 400 VAL 697 A THR 698 n 401 THR 698 A PRO 699 n 402 PRO 699 A ASN 700 n 403 ASN 700 A MET 701 n 404 MET 701 A ARG 702 n 405 ARG 702 A ARG 703 n 406 ARG 703 A GLN 704 n 407 GLN 704 A ALA 705 n 408 ALA 705 A LYS 706 n 409 LYS 706 A ALA 707 n 410 ALA 707 A VAL 708 n 411 VAL 708 A ASN 709 n 412 ASN 709 A PHE 710 n 413 PHE 710 A GLY 711 n 414 GLY 711 A ILE 712 n 415 ILE 712 A VAL 713 n 416 VAL 713 A TYR 714 n 417 TYR 714 A GLY 715 n 418 GLY 715 A ILE 716 n 419 ILE 716 A SER 717 n 420 SER 717 A ASP 718 n 421 ASP 718 A TYR 719 n 422 TYR 719 A GLY 720 n 423 GLY 720 A LEU 721 n 424 LEU 721 A ALA 722 n 425 ALA 722 A GLN 723 n 426 GLN 723 A ASN 724 n 427 ASN 724 A LEU 725 n 428 LEU 725 A ASN 726 n 429 ASN 726 A ILE 727 n 430 ILE 727 A SER 728 n 431 SER 728 A ARG 729 n 432 ARG 729 A LYS 730 n 433 LYS 730 A GLU 731 n 434 GLU 731 A ALA 732 n 435 ALA 732 A ALA 733 n 436 ALA 733 A GLU 734 n 437 GLU 734 A PHE 735 n 438 PHE 735 A ILE 736 n 439 ILE 736 A GLU 737 n 440 GLU 737 A ARG 738 n 441 ARG 738 A TYR 739 n 442 TYR 739 A PHE 740 n 443 PHE 740 A GLU 741 n 444 GLU 741 A SER 742 n 445 SER 742 A PHE 743 n 446 PHE 743 A PRO 744 n 447 PRO 744 A GLY 745 n 448 GLY 745 A VAL 746 n 449 VAL 746 A LYS 747 n 450 LYS 747 A ARG 748 n 451 ARG 748 A TYR 749 n 452 TYR 749 A MET 750 n 453 MET 750 A GLU 751 n 454 GLU 751 A ASN 752 n 455 ASN 752 A ILE 753 n 456 ILE 753 A VAL 754 n 457 VAL 754 A GLN 755 n 458 GLN 755 A GLU 756 n 459 GLU 756 A ALA 757 n 460 ALA 757 A LYS 758 n 461 LYS 758 A GLN 759 n 462 GLN 759 A LYS 760 n 463 LYS 760 A GLY 761 n 464 GLY 761 A TYR 762 n 465 TYR 762 A VAL 763 n 466 VAL 763 A THR 764 n 467 THR 764 A THR 765 n 468 THR 765 A LEU 766 n 469 LEU 766 A LEU 767 n 470 LEU 767 A HIS 768 n 471 HIS 768 A ARG 769 n 472 ARG 769 A ARG 770 n 473 ARG 770 A ARG 771 n 474 ARG 771 A TYR 772 n 475 TYR 772 A LEU 773 n 476 LEU 773 A PRO 774 n 477 PRO 774 A ASP 775 n 478 ASP 775 A ILE 776 n 479 ILE 776 A THR 777 n 480 THR 777 A SER 778 n 481 SER 778 A ARG 779 n 482 ARG 779 A ASN 780 n 483 ASN 780 A PHE 781 n 484 PHE 781 A ASN 782 n 485 ASN 782 A VAL 783 n 486 VAL 783 A ARG 784 n 487 ARG 784 A SER 785 n 488 SER 785 A PHE 786 n 489 PHE 786 A ALA 787 n 490 ALA 787 A GLU 788 n 491 GLU 788 A ARG 789 n 492 ARG 789 A MET 790 n 493 MET 790 A ALA 791 n 494 ALA 791 A MET 792 n 495 MET 792 A ASN 793 n 496 ASN 793 A THR 794 n 497 THR 794 A PRO 795 n 498 PRO 795 A ILE 796 n 499 ILE 796 A GLN 797 n 500 GLN 797 A GLY 798 n 501 GLY 798 A SER 799 n 502 SER 799 A ALA 800 n 503 ALA 800 A ALA 801 n 504 ALA 801 A ASP 802 n 505 ASP 802 A ILE 803 n 506 ILE 803 A ILE 804 n 507 ILE 804 A LYS 805 n 508 LYS 805 A LYS 806 n 509 LYS 806 A ALA 807 n 510 ALA 807 A MET 808 n 511 MET 808 A ILE 809 n 512 ILE 809 A ASP 810 n 513 ASP 810 A LEU 811 n 514 LEU 811 A ASN 812 n 515 ASN 812 A ALA 813 n 516 ALA 813 A ARG 814 n 517 ARG 814 A LEU 815 n 518 LEU 815 A LYS 816 n 519 LYS 816 A GLU 817 n 520 GLU 817 A GLU 818 n 521 GLU 818 A ARG 819 n 522 ARG 819 A LEU 820 n 523 LEU 820 A GLN 821 n 524 GLN 821 A ALA 822 n 525 ALA 822 A HIS 823 n 526 HIS 823 A LEU 824 n 527 LEU 824 A LEU 825 n 528 LEU 825 A LEU 826 n 529 LEU 826 A GLN 827 n 530 GLN 827 A VAL 828 n 531 VAL 828 A HIS 829 n 532 HIS 829 A ASP 830 n 533 ASP 830 A GLU 831 n 534 GLU 831 A LEU 832 n 535 LEU 832 A ILE 833 n 536 ILE 833 A LEU 834 n 537 LEU 834 A GLU 835 n 538 GLU 835 A ALA 836 n 539 ALA 836 A PRO 837 n 540 PRO 837 A LYS 838 n 541 LYS 838 A GLU 839 n 542 GLU 839 A GLU 840 n 543 GLU 840 A MET 841 n 544 MET 841 A GLU 842 n 545 GLU 842 A ARG 843 n 546 ARG 843 A LEU 844 n 547 LEU 844 A CYS 845 n 548 CYS 845 A ARG 846 n 549 ARG 846 A LEU 847 n 550 LEU 847 A VAL 848 n 551 VAL 848 A PRO 849 n 552 PRO 849 A GLU 850 n 553 GLU 850 A VAL 851 n 554 VAL 851 A MET 852 n 555 MET 852 A GLU 853 n 556 GLU 853 A GLN 854 n 557 GLN 854 A ALA 855 n 558 ALA 855 A VAL 856 n 559 VAL 856 A THR 857 n 560 THR 857 A LEU 858 n 561 LEU 858 A ARG 859 n 562 ARG 859 A VAL 860 n 563 VAL 860 A PRO 861 n 564 PRO 861 A LEU 862 n 565 LEU 862 A LYS 863 n 566 LYS 863 A VAL 864 n 567 VAL 864 A ASP 865 n 568 ASP 865 A TYR 866 n 569 TYR 866 A HIS 867 n 570 HIS 867 A TYR 868 n 571 TYR 868 A GLY 869 n 572 GLY 869 A SER 870 n 573 SER 870 A THR 871 n 574 THR 871 A TRP 872 n 575 TRP 872 A TYR 873 n 576 TYR 873 A ASP 874 n 577 ASP 874 A ALA 875 n 578 ALA 875 A LYS 876 n 579 LYS 876 A author_and_software_defined_assembly PISA 3 trimeric 5710 -62 27920 B DG 14 A OP1 DG 14 1_555 B CA 101 D CA CA 1_555 B HOH 201 I O HOH 1_555 95.2 B DG 14 A OP1 DG 14 1_555 B CA 101 D CA CA 1_555 A POP 1001 E O POP 1_555 147.5 B HOH 201 I O HOH 1_555 B CA 101 D CA CA 1_555 A POP 1001 E O POP 1_555 112.1 B DG 14 A OP1 DG 14 1_555 B CA 101 D CA CA 1_555 A POP 1001 E O2 POP 1_555 103.1 B HOH 201 I O HOH 1_555 B CA 101 D CA CA 1_555 A POP 1001 E O2 POP 1_555 91.5 A POP 1001 E O POP 1_555 B CA 101 D CA CA 1_555 A POP 1001 E O2 POP 1_555 60.6 A ASP 354 C OD1 ASP 57 1_555 A CA 1004 H CA CA 1_555 A GLN 356 C OE1 GLN 59 1_555 109.7 A ASP 354 C OD1 ASP 57 1_555 A CA 1004 H CA CA 1_555 A HOH 1112 K O HOH 1_555 143.0 A GLN 356 C OE1 GLN 59 1_555 A CA 1004 H CA CA 1_555 A HOH 1112 K O HOH 1_555 106.5 A ASP 354 C OD1 ASP 57 1_555 A CA 1004 H CA CA 1_555 A HOH 1342 K O HOH 1_555 77.1 A GLN 356 C OE1 GLN 59 1_555 A CA 1004 H CA CA 1_555 A HOH 1342 K O HOH 1_555 108.0 A HOH 1112 K O HOH 1_555 A CA 1004 H CA CA 1_555 A HOH 1342 K O HOH 1_555 85.0 A ASP 830 C OD1 ASP 533 1_555 A CA 1002 F CA CA 1_555 A GLU 831 C OE2 GLU 534 1_555 116.1 A ASP 830 C OD1 ASP 533 1_555 A CA 1002 F CA CA 1_555 A POP 1001 E O POP 1_555 122.5 A GLU 831 C OE2 GLU 534 1_555 A CA 1002 F CA CA 1_555 A POP 1001 E O POP 1_555 120.3 A ASP 830 C OD1 ASP 533 1_555 A CA 1002 F CA CA 1_555 A POP 1001 E O5 POP 1_555 130.1 A GLU 831 C OE2 GLU 534 1_555 A CA 1002 F CA CA 1_555 A POP 1001 E O5 POP 1_555 97.8 A POP 1001 E O POP 1_555 A CA 1002 F CA CA 1_555 A POP 1001 E O5 POP 1_555 51.5 A LEU 858 C O LEU 561 1_555 A CA 1003 G CA CA 1_555 A HOH 1186 K O HOH 1_555 75.9 A LEU 858 C O LEU 561 1_555 A CA 1003 G CA CA 1_555 A HOH 1240 K O HOH 1_555 77.4 A HOH 1186 K O HOH 1_555 A CA 1003 G CA CA 1_555 A HOH 1240 K O HOH 1_555 112.7 A LEU 858 C O LEU 561 1_555 A CA 1003 G CA CA 1_555 A HOH 1257 K O HOH 1_555 142.3 A HOH 1186 K O HOH 1_555 A CA 1003 G CA CA 1_555 A HOH 1257 K O HOH 1_555 90.0 A HOH 1240 K O HOH 1_555 A CA 1003 G CA CA 1_555 A HOH 1257 K O HOH 1_555 76.3 A LEU 858 C O LEU 561 1_555 A CA 1003 G CA CA 1_555 A HOH 1367 K O HOH 1_555 75.1 A HOH 1186 K O HOH 1_555 A CA 1003 G CA CA 1_555 A HOH 1367 K O HOH 1_555 136.0 A HOH 1240 K O HOH 1_555 A CA 1003 G CA CA 1_555 A HOH 1367 K O HOH 1_555 92.1 A HOH 1257 K O HOH 1_555 A CA 1003 G CA CA 1_555 A HOH 1367 K O HOH 1_555 132.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 302 C N THR 5 A O PHE 345 C O PHE 48 A O PHE 344 C O PHE 47 A N VAL 337 C N VAL 40 A O VAL 338 C O VAL 41 A N ALA 317 C N ALA 20 A N LEU 318 C N LEU 21 A O SER 369 C O SER 72 A N MET 370 C N MET 73 A O PHE 392 C O PHE 95 A O VAL 602 C O VAL 305 A N VAL 493 C N VAL 196 A N LYS 494 C N LYS 197 A O VAL 641 C O VAL 344 A N ILE 605 C N ILE 308 A O THR 619 C O THR 322 A N LEU 825 C N LEU 528 A O ILE 833 C O ILE 536 A O ALA 836 C O ALA 539 A N LEU 648 C N LEU 351 A N ALA 651 C N ALA 354 A O HIS 867 C O HIS 570 A N VAL 763 C N VAL 466 A O ARG 771 C O ARG 474 1 C C5' DC 16 B C5' DC 16 1 Y 1 C C4' DC 16 B C4' DC 16 1 Y 1 C O4' DC 16 B O4' DC 16 1 Y 1 C C3' DC 16 B C3' DC 16 1 Y 1 C O3' DC 16 B O3' DC 16 1 Y 1 C C2' DC 16 B C2' DC 16 1 Y 1 C C1' DC 16 B C1' DC 16 1 Y 1 C N1 DC 16 B N1 DC 16 1 Y 1 C C2 DC 16 B C2 DC 16 1 Y 1 C O2 DC 16 B O2 DC 16 1 Y 1 C N3 DC 16 B N3 DC 16 1 Y 1 C C4 DC 16 B C4 DC 16 1 Y 1 C N4 DC 16 B N4 DC 16 1 Y 1 C C5 DC 16 B C5 DC 16 1 Y 1 C C6 DC 16 B C6 DC 16 1 Y 1 B DG 1 A DG 1 1 Y 1 B DG 2 A DG 2 1 Y 1 B DC 3 A DC 3 1 Y 1 B DT 4 A DT 4 1 Y 1 C DT 1 B DT 1 1 Y 1 C DC 17 B DC 17 1 Y 1 A LYS 549 C LYS 252 1 Y 1 A THR 550 C THR 253 1 Y 1 A LYS 551 C LYS 254 1 Y 1 A THR 552 C THR 255 1 Y 1 3.64 0.30 108.30 111.94 B B B O4' C1' N9 DA DA DA 5 5 5 N 1 9.23 1.20 119.70 128.93 B B B C3' O3' P DA DA DC 5 5 6 Y 1 -5.62 0.70 108.00 102.38 B B B O4' C1' N9 DA DA DA 7 7 7 N 1 2.88 0.30 108.30 111.18 B B B O4' C1' N9 DG DG DG 9 9 9 N 1 -2.56 0.40 104.50 101.94 B B B O4' C4' C3' DA DA DA 10 10 10 N 1 -5.70 0.70 102.20 96.50 B B B C4' C3' C2' DA DA DA 10 10 10 N 1 6.31 0.30 108.30 114.61 B B B O4' C1' N1 DC DC DC 11 11 11 N 1 -3.20 0.40 104.50 101.30 B B B O4' C4' C3' DT DT DT 12 12 12 N 1 1.96 0.30 108.30 110.26 B B B O4' C1' N1 DT DT DT 12 12 12 N 1 -3.68 0.60 122.30 118.62 B B B N3 C2 O2 DT DT DT 12 12 12 N 1 4.38 0.60 119.00 123.38 B B B C4 C5 C7 DT DT DT 12 12 12 N 1 -2.65 0.40 104.50 101.85 B B B O4' C4' C3' DC DC DC 13 13 13 N 1 1.82 0.30 108.30 110.12 B B B O4' C1' N1 DC DC DC 13 13 13 N 1 -3.62 0.60 128.60 124.98 B B B C5 C6 O6 DG DG DG 14 14 14 N 1 4.52 0.30 108.30 112.82 C C C O4' C1' N9 DA DA DA 3 3 3 N 1 3.49 0.30 108.30 111.79 C C C O4' C1' N9 DG DG DG 7 7 7 N 1 10.59 1.20 119.70 130.29 C C C C3' O3' P DG DG DT 7 7 8 Y 1 5.93 0.30 108.30 114.23 C C C O4' C1' N1 DT DT DT 13 13 13 N 1 3.49 0.30 108.30 111.79 C C C O4' C1' N9 DA DA DA 14 14 14 N 1 7.70 0.30 108.30 116.00 C C C O4' C1' N9 DG DG DG 15 15 15 N 1 B B O3' C3' DG DG 14 14 -0.045 0.006 1.419 1.374 N 1 A ALA 421 -85.49 37.99 1 A LYS 431 -97.86 -99.36 1 A ILE 588 -102.46 -71.59 1 A ILE 628 -150.53 -24.40 1 A HIS 829 72.69 -73.73 32.076 1.87 0.00 0.00 -1.11 0.00 -0.77 0.952 0.919 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.24275 0.18509 0.19090 0.19090 2.18 70.16 4433 45712 39669 10.1 96.48 5.453 0.138 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.234 0.206 0.80 0.80 1.40 3HT3 MAXIMUM LIKELIHOOD MASK 2.18 70.16 300 5427 13 497 4617 0.018 0.022 5307 1.758 2.095 7286 5.919 5.000 585 38.030 24.280 236 17.744 15.000 878 18.785 15.000 39 0.114 0.200 816 0.008 0.021 3841 0.896 1.500 2892 1.767 2.000 4672 2.988 3.000 2415 4.807 4.500 2608 0.334 0.273 2.236 273 2237 20 75.63 2.18 70.16 4DSK 45712 44295 0 0 0.085 1 19.8 5.6 96.9 2.18 2.26 2.2 4497 0.374 1 2.3 78.5 data collection HKL-2000 phasing PHASES refinement REFMAC 5.5.0109 data reduction HKL-2000 data scaling HKL-2000 Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA, PPi and Calcium 1 N N 2 N N 3 N N 4 N N 5 N N 4 N N 4 N N 4 N N 6 N N 6 N N 6 N N A THR 308 C THR 11 HELX_P A ALA 313 C ALA 16 5 1 6 A ARG 347 C ARG 50 HELX_P A LEU 352 C LEU 55 1 2 6 A ASP 354 C ASP 57 HELX_P A GLY 362 C GLY 65 1 3 9 A ASP 372 C ASP 75 HELX_P A LYS 383 C LYS 86 1 4 12 A LEU 394 C LEU 97 HELX_P A ASP 402 C ASP 105 1 5 9 A PRO 403 C PRO 106 HELX_P A GLY 406 C GLY 109 5 6 4 A ASP 409 C ASP 112 HELX_P A MET 416 C MET 119 1 7 8 A PRO 424 C PRO 127 HELX_P A GLY 430 C GLY 133 1 8 7 A ASP 439 C ASP 142 HELX_P A ASN 468 C ASN 171 1 9 30 A GLN 470 C GLN 173 HELX_P A LEU 477 C LEU 180 1 10 8 A LEU 477 C LEU 180 HELX_P A GLY 492 C GLY 195 1 11 16 A ASP 496 C ASP 199 HELX_P A GLY 523 C GLY 226 1 12 28 A SER 530 C SER 233 HELX_P A GLU 540 C GLU 243 1 13 11 A SER 557 C SER 260 HELX_P A ALA 565 C ALA 268 1 14 9 A PRO 566 C PRO 269 HELX_P A HIS 568 C HIS 271 5 15 3 A GLU 569 C GLU 272 HELX_P A ILE 588 C ILE 291 1 16 20 A ILE 588 C ILE 291 HELX_P A VAL 595 C VAL 298 1 17 8 A LEU 630 C LEU 333 HELX_P A LYS 635 C LYS 338 1 18 6 A ILE 636 C ILE 339 HELX_P A GLN 638 C GLN 341 5 19 3 A GLN 656 C GLN 359 HELX_P A GLU 667 C GLU 370 1 20 12 A ASP 668 C ASP 371 HELX_P A ARG 677 C ARG 380 1 21 10 A ASP 680 C ASP 383 HELX_P A GLN 691 C GLN 394 1 22 12 A SER 693 C SER 396 HELX_P A VAL 697 C VAL 400 5 23 5 A THR 698 C THR 401 HELX_P A GLY 715 C GLY 418 1 24 18 A SER 717 C SER 420 HELX_P A ASN 726 C ASN 429 1 25 10 A SER 728 C SER 431 HELX_P A PHE 743 C PHE 446 1 26 16 A PHE 743 C PHE 446 HELX_P A GLY 761 C GLY 464 1 27 19 A PRO 774 C PRO 477 HELX_P A SER 778 C SER 481 5 28 5 A ASN 780 C ASN 483 HELX_P A GLU 818 C GLU 521 1 29 39 A GLU 840 C GLU 543 HELX_P A ALA 855 C ALA 558 1 30 16 metalc 2.507 B DG 14 A OP1 DG 14 1_555 B CA 101 D CA CA 1_555 metalc 2.288 B CA 101 D CA CA 1_555 B HOH 201 I O HOH 1_555 metalc 2.331 B CA 101 D CA CA 1_555 A POP 1001 E O POP 1_555 metalc 2.706 B CA 101 D CA CA 1_555 A POP 1001 E O2 POP 1_555 metalc 2.579 A ASP 354 C OD1 ASP 57 1_555 A CA 1004 H CA CA 1_555 metalc 2.970 A GLN 356 C OE1 GLN 59 1_555 A CA 1004 H CA CA 1_555 metalc 2.451 A ASP 830 C OD1 ASP 533 1_555 A CA 1002 F CA CA 1_555 metalc 2.760 A GLU 831 C OE2 GLU 534 1_555 A CA 1002 F CA CA 1_555 metalc 2.766 A LEU 858 C O LEU 561 1_555 A CA 1003 G CA CA 1_555 metalc 2.811 A POP 1001 E O POP 1_555 A CA 1002 F CA CA 1_555 metalc 3.025 A POP 1001 E O5 POP 1_555 A CA 1002 F CA CA 1_555 metalc 2.655 A CA 1003 G CA CA 1_555 A HOH 1186 K O HOH 1_555 metalc 2.618 A CA 1003 G CA CA 1_555 A HOH 1240 K O HOH 1_555 metalc 2.482 A CA 1003 G CA CA 1_555 A HOH 1257 K O HOH 1_555 metalc 2.605 A CA 1003 G CA CA 1_555 A HOH 1367 K O HOH 1_555 metalc 2.277 A CA 1004 H CA CA 1_555 A HOH 1112 K O HOH 1_555 metalc 2.442 A CA 1004 H CA CA 1_555 A HOH 1342 K O HOH 1_555 hydrog DA-DT PAIR B DA 5 A N1 DA 5 1_555 C DT 13 B N3 DT 13 1_555 hydrog WATSON-CRICK B DC 6 A N3 DC 6 1_555 C DG 12 B N1 DG 12 1_555 hydrog WATSON-CRICK B DC 6 A N4 DC 6 1_555 C DG 12 B O6 DG 12 1_555 hydrog WATSON-CRICK B DC 6 A O2 DC 6 1_555 C DG 12 B N2 DG 12 1_555 hydrog WATSON-CRICK B DA 7 A N1 DA 7 1_555 C DT 11 B N3 DT 11 1_555 hydrog WATSON-CRICK B DA 7 A N6 DA 7 1_555 C DT 11 B O4 DT 11 1_555 hydrog WATSON-CRICK B DG 8 A N1 DG 8 1_555 C DC 10 B N3 DC 10 1_555 hydrog WATSON-CRICK B DG 8 A N2 DG 8 1_555 C DC 10 B O2 DC 10 1_555 hydrog WATSON-CRICK B DG 8 A O6 DG 8 1_555 C DC 10 B N4 DC 10 1_555 hydrog WATSON-CRICK B DG 9 A N1 DG 9 1_555 C DC 9 B N3 DC 9 1_555 hydrog WATSON-CRICK B DG 9 A N2 DG 9 1_555 C DC 9 B O2 DC 9 1_555 hydrog WATSON-CRICK B DG 9 A O6 DG 9 1_555 C DC 9 B N4 DC 9 1_555 hydrog WATSON-CRICK B DA 10 A N1 DA 10 1_555 C DT 8 B N3 DT 8 1_555 hydrog WATSON-CRICK B DA 10 A N6 DA 10 1_555 C DT 8 B O4 DT 8 1_555 hydrog WATSON-CRICK B DC 11 A N3 DC 11 1_555 C DG 7 B N1 DG 7 1_555 hydrog WATSON-CRICK B DC 11 A N4 DC 11 1_555 C DG 7 B O6 DG 7 1_555 hydrog WATSON-CRICK B DC 11 A O2 DC 11 1_555 C DG 7 B N2 DG 7 1_555 hydrog WATSON-CRICK B DT 12 A N3 DT 12 1_555 C DA 6 B N1 DA 6 1_555 hydrog WATSON-CRICK B DT 12 A O4 DT 12 1_555 C DA 6 B N6 DA 6 1_555 hydrog WATSON-CRICK B DC 13 A N3 DC 13 1_555 C DG 5 B N1 DG 5 1_555 hydrog WATSON-CRICK B DC 13 A N4 DC 13 1_555 C DG 5 B O6 DG 5 1_555 hydrog WATSON-CRICK B DC 13 A O2 DC 13 1_555 C DG 5 B N2 DG 5 1_555 hydrog WATSON-CRICK B DG 14 A N1 DG 14 1_555 C DC 4 B N3 DC 4 1_555 hydrog WATSON-CRICK B DG 14 A N2 DG 14 1_555 C DC 4 B O2 DC 4 1_555 hydrog WATSON-CRICK B DG 14 A O6 DG 14 1_555 C DC 4 B N4 DC 4 1_555 TRANSFERASE/DNA DNA polymerase, polymerization fidelity, pyrophosphorolysis, purine selectivity, blunt end extension, base stacking, DNA synthesis, TRANSFERASE-DNA complex A GLU 620 C GLU 323 1 A PRO 621 C PRO 324 2.25 D9N168_GEOSE UNP 3 1 D9N168 KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAA VALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWEL ERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVI LFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGRLS STEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEV TPNMRRQAKAVNFGIPYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDIT SRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVT LRVPLKVDYHYGSTWYDAK 4DSK PDB 1 1 4DSK GGCTACAGGACTCG 4DSK PDB 2 1 4DSK TCACGAGTCCTGTAGCC 1 579 4DSK 298 876 D9N168 A 1 1 579 1 14 4DSK 1 14 4DSK B 2 1 14 1 17 4DSK 1 17 4DSK C 3 1 17 1 ALA engineered mutation ASP 598 4DSK A D9N168 UNP 301 301 1 PRO engineered mutation VAL 713 4DSK A D9N168 UNP 416 416 6 3 2 4 2 parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 302 C THR 5 A LEU 303 C LEU 6 A GLY 342 C GLY 45 A LEU 346 C LEU 49 A GLY 334 C GLY 37 A ASN 339 C ASN 42 A LYS 315 C LYS 18 A GLU 321 C GLU 24 A LYS 367 C LYS 70 A MET 370 C MET 73 A VAL 390 C VAL 93 A ASP 393 C ASP 96 A LYS 601 C LYS 304 A VAL 602 C VAL 305 A VAL 493 C VAL 196 A VAL 495 C VAL 198 A PHE 640 C PHE 343 A VAL 641 C VAL 344 A ILE 605 C ILE 308 A ASN 607 C ASN 310 A SER 617 C SER 320 A THR 619 C THR 322 A HIS 823 C HIS 526 A GLN 827 C GLN 530 A GLU 831 C GLU 534 A PRO 837 C PRO 540 A TRP 647 C TRP 350 A TYR 654 C TYR 357 A VAL 864 C VAL 567 A GLY 869 C GLY 572 A TYR 762 C TYR 465 A THR 764 C THR 467 A ARG 770 C ARG 473 A TYR 772 C TYR 475 BINDING SITE FOR RESIDUE CA B 101 B CA 101 Software 4 BINDING SITE FOR RESIDUE POP A 1001 A POP 1001 Software 7 BINDING SITE FOR RESIDUE CA A 1002 A CA 1002 Software 5 BINDING SITE FOR RESIDUE CA A 1003 A CA 1003 Software 5 BINDING SITE FOR RESIDUE CA A 1004 A CA 1004 Software 4 A POP 1001 E POP 4 1_555 A CA 1002 F CA 4 1_555 B DG 14 A DG 14 4 1_555 B HOH 201 I HOH 4 1_555 A ASP 653 C ASP 356 7 1_555 A TYR 654 C TYR 357 7 1_555 A ASP 830 C ASP 533 7 1_555 A CA 1002 F CA 7 1_555 A HOH 1222 K HOH 7 1_555 B DG 14 A DG 14 7 1_555 B CA 101 D CA 7 1_555 A ASP 830 C ASP 533 5 1_555 A GLU 831 C GLU 534 5 1_555 A POP 1001 E POP 5 1_555 B DG 14 A DG 14 5 1_555 B CA 101 D CA 5 1_555 A LEU 858 C LEU 561 5 1_555 A HOH 1186 K HOH 5 1_555 A HOH 1240 K HOH 5 1_555 A HOH 1257 K HOH 5 1_555 A HOH 1367 K HOH 5 1_555 A ASP 354 C ASP 57 4 1_555 A GLN 356 C GLN 59 4 1_555 A HOH 1112 K HOH 4 1_555 A HOH 1342 K HOH 4 1_555 19 P 21 21 21