0.007808 0.000000 0.000000 0.000000 0.007808 0.000000 0.000000 0.000000 0.013068 0.00000 0.00000 0.00000 Durand, E. Audoly, G. Derrez, E. Spinelli, S. Ortiz-Lombardia, M. Cascales, E. Raoult, D. Cambillau, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 128.080 128.080 76.520 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 1083-351X Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family. 2012 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2011-12-16 PSI PILATUS 6M KIRKPATRICK-BAEZ PAIR OF BI- MORPH MIRRORS PLUS CHANNEL CUT CRYOGENICALLY COOLED MONOCHROMATOR CRYSTAL SINGLE WAVELENGTH M x-ray 1 0.97918 1.0 PROXIMA 1 SOLEIL 0.97918 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 44164.270 VgrG protein unp residues 716-1111 1 man polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 160 nat water no yes NAQPNLGRSTKATPDFPTHFPKSSIGIENELAGLVVA(MSE)PANSAQKFGYVKSAQGDALF(MSE)LTKD(MSE)NQGS YQRPPSLQDGKNYQNWQTHTVELVSYPCE(MSE)DDKAAVETRKQA(MSE)LWLATHFTTHIDQSNHQPLAPIQSEDGRF VIEITNAKHVIAAGNGISAESQGQTIT(MSE)TPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAE NLDDKELAANVFAYLTSIYLKTAELAKKFGIYINEWDP(MSE)SEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSK SDAKAV(MSE)KHIKPQLQSRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTES TTKSEVKLLDQFDP(MSE)KRKTVIQQVESLV NAQPNLGRSTKATPDFPTHFPKSSIGIENELAGLVVAMPANSAQKFGYVKSAQGDALFMLTKDMNQGSYQRPPSLQDGKN YQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAE SQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAE LAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQ YFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTESTTKSEVKLLDQFDPMKRKTVIQQVESLV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n O395 sample VC_1416, VgrG1 666 Vibrio cholerae 511693 Escherichia coli BL21 plasmid pETG-20A 1 3.56 65.42 6.3 mixing 300 nL of protein at 13mg/mL with 100 nL of 2.17 M AmSO4, 0.1 M Bi-Tris pH 7.0 , VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 repository Initial release 1 0 2012-08-29 RCSB Y RCSB 2012-02-21 REL REL GOL GLYCEROL HOH water GOL 1 2 GOL GOL 401 A HOH 1 3 HOH HOH 501 A HOH 2 3 HOH HOH 502 A HOH 3 3 HOH HOH 503 A HOH 4 3 HOH HOH 504 A HOH 5 3 HOH HOH 505 A HOH 6 3 HOH HOH 506 A HOH 7 3 HOH HOH 507 A HOH 8 3 HOH HOH 508 A HOH 9 3 HOH HOH 509 A HOH 510 3 HOH HOH 510 A HOH 11 3 HOH HOH 511 A HOH 12 3 HOH HOH 512 A HOH 13 3 HOH HOH 513 A HOH 14 3 HOH HOH 514 A HOH 15 3 HOH HOH 515 A HOH 16 3 HOH HOH 516 A HOH 17 3 HOH HOH 517 A HOH 18 3 HOH HOH 518 A HOH 19 3 HOH HOH 519 A HOH 20 3 HOH HOH 520 A HOH 21 3 HOH HOH 521 A HOH 22 3 HOH HOH 522 A HOH 23 3 HOH HOH 523 A HOH 24 3 HOH HOH 524 A HOH 25 3 HOH HOH 525 A HOH 26 3 HOH HOH 526 A HOH 27 3 HOH HOH 527 A HOH 28 3 HOH HOH 528 A HOH 29 3 HOH HOH 529 A HOH 30 3 HOH HOH 530 A HOH 31 3 HOH HOH 531 A HOH 32 3 HOH HOH 532 A HOH 33 3 HOH HOH 533 A HOH 34 3 HOH HOH 534 A HOH 35 3 HOH HOH 535 A HOH 36 3 HOH HOH 536 A HOH 37 3 HOH HOH 537 A HOH 38 3 HOH HOH 538 A HOH 39 3 HOH HOH 539 A HOH 40 3 HOH HOH 540 A HOH 541 3 HOH HOH 541 A HOH 42 3 HOH HOH 542 A HOH 43 3 HOH HOH 543 A HOH 44 3 HOH HOH 544 A HOH 45 3 HOH HOH 545 A HOH 46 3 HOH HOH 546 A HOH 47 3 HOH HOH 547 A HOH 49 3 HOH HOH 548 A HOH 50 3 HOH HOH 549 A HOH 51 3 HOH HOH 550 A HOH 52 3 HOH HOH 551 A HOH 53 3 HOH HOH 552 A HOH 54 3 HOH HOH 553 A HOH 55 3 HOH HOH 554 A HOH 56 3 HOH HOH 555 A HOH 57 3 HOH HOH 556 A HOH 58 3 HOH HOH 557 A HOH 59 3 HOH HOH 558 A HOH 60 3 HOH HOH 559 A HOH 61 3 HOH HOH 560 A HOH 62 3 HOH HOH 561 A HOH 64 3 HOH HOH 562 A HOH 65 3 HOH HOH 563 A HOH 66 3 HOH HOH 564 A HOH 67 3 HOH HOH 565 A HOH 68 3 HOH HOH 566 A HOH 69 3 HOH HOH 567 A HOH 70 3 HOH HOH 568 A HOH 72 3 HOH HOH 569 A HOH 73 3 HOH HOH 570 A HOH 74 3 HOH HOH 571 A HOH 75 3 HOH HOH 572 A HOH 76 3 HOH HOH 573 A HOH 77 3 HOH HOH 574 A HOH 79 3 HOH HOH 575 A HOH 80 3 HOH HOH 576 A HOH 81 3 HOH HOH 577 A HOH 82 3 HOH HOH 578 A HOH 83 3 HOH HOH 579 A HOH 84 3 HOH HOH 580 A HOH 85 3 HOH HOH 581 A HOH 86 3 HOH HOH 582 A HOH 87 3 HOH HOH 583 A HOH 88 3 HOH HOH 584 A HOH 89 3 HOH HOH 585 A HOH 90 3 HOH HOH 586 A HOH 91 3 HOH HOH 587 A HOH 92 3 HOH HOH 588 A HOH 93 3 HOH HOH 589 A HOH 94 3 HOH HOH 590 A HOH 95 3 HOH HOH 591 A HOH 96 3 HOH HOH 592 A HOH 97 3 HOH HOH 593 A HOH 98 3 HOH HOH 594 A HOH 99 3 HOH HOH 595 A HOH 600 3 HOH HOH 596 A HOH 101 3 HOH HOH 597 A HOH 102 3 HOH HOH 598 A HOH 103 3 HOH HOH 599 A HOH 104 3 HOH HOH 600 A HOH 105 3 HOH HOH 601 A HOH 106 3 HOH HOH 602 A HOH 107 3 HOH HOH 603 A HOH 108 3 HOH HOH 604 A HOH 109 3 HOH HOH 605 A HOH 110 3 HOH HOH 606 A HOH 611 3 HOH HOH 607 A HOH 112 3 HOH HOH 608 A HOH 114 3 HOH HOH 609 A HOH 115 3 HOH HOH 610 A HOH 116 3 HOH HOH 611 A HOH 117 3 HOH HOH 612 A HOH 118 3 HOH HOH 613 A HOH 119 3 HOH HOH 614 A HOH 120 3 HOH HOH 615 A HOH 121 3 HOH HOH 616 A HOH 122 3 HOH HOH 617 A HOH 123 3 HOH HOH 618 A HOH 624 3 HOH HOH 619 A HOH 125 3 HOH HOH 620 A HOH 126 3 HOH HOH 621 A HOH 627 3 HOH HOH 622 A HOH 128 3 HOH HOH 623 A HOH 629 3 HOH HOH 624 A HOH 130 3 HOH HOH 625 A HOH 131 3 HOH HOH 626 A HOH 132 3 HOH HOH 627 A HOH 133 3 HOH HOH 628 A HOH 134 3 HOH HOH 629 A HOH 135 3 HOH HOH 630 A HOH 136 3 HOH HOH 631 A HOH 137 3 HOH HOH 632 A HOH 138 3 HOH HOH 633 A HOH 139 3 HOH HOH 634 A HOH 140 3 HOH HOH 635 A HOH 141 3 HOH HOH 636 A HOH 142 3 HOH HOH 637 A HOH 143 3 HOH HOH 638 A HOH 144 3 HOH HOH 639 A HOH 145 3 HOH HOH 640 A HOH 646 3 HOH HOH 641 A HOH 147 3 HOH HOH 642 A HOH 148 3 HOH HOH 643 A HOH 149 3 HOH HOH 644 A HOH 150 3 HOH HOH 645 A HOH 151 3 HOH HOH 646 A HOH 152 3 HOH HOH 647 A HOH 153 3 HOH HOH 648 A HOH 154 3 HOH HOH 649 A HOH 155 3 HOH HOH 650 A HOH 156 3 HOH HOH 651 A HOH 157 3 HOH HOH 652 A HOH 158 3 HOH HOH 653 A HOH 159 3 HOH HOH 654 A HOH 160 3 HOH HOH 655 A HOH 161 3 HOH HOH 656 A HOH 162 3 HOH HOH 657 A HOH 163 3 HOH HOH 658 A HOH 164 3 HOH HOH 659 A HOH 165 3 HOH HOH 660 A n 1 -11 A n 2 -10 A n 3 -9 A n 4 -8 A n 5 -7 A n 6 -6 A n 7 -5 A n 8 -4 A n 9 -3 A THR -2 n 10 THR -2 A LYS -1 n 11 LYS -1 A ALA 0 n 12 ALA 0 A THR 1 n 13 THR 1 A PRO 2 n 14 PRO 2 A ASP 3 n 15 ASP 3 A PHE 4 n 16 PHE 4 A PRO 5 n 17 PRO 5 A THR 6 n 18 THR 6 A HIS 7 n 19 HIS 7 A PHE 8 n 20 PHE 8 A PRO 9 n 21 PRO 9 A LYS 10 n 22 LYS 10 A SER 11 n 23 SER 11 A SER 12 n 24 SER 12 A ILE 13 n 25 ILE 13 A GLY 14 n 26 GLY 14 A ILE 15 n 27 ILE 15 A GLU 16 n 28 GLU 16 A ASN 17 n 29 ASN 17 A GLU 18 n 30 GLU 18 A LEU 19 n 31 LEU 19 A ALA 20 n 32 ALA 20 A GLY 21 n 33 GLY 21 A LEU 22 n 34 LEU 22 A VAL 23 n 35 VAL 23 A VAL 24 n 36 VAL 24 A ALA 25 n 37 ALA 25 A MSE 26 n 38 MSE 26 A PRO 27 n 39 PRO 27 A ALA 28 n 40 ALA 28 A ASN 29 n 41 ASN 29 A SER 30 n 42 SER 30 A ALA 31 n 43 ALA 31 A GLN 32 n 44 GLN 32 A LYS 33 n 45 LYS 33 A PHE 34 n 46 PHE 34 A GLY 35 n 47 GLY 35 A TYR 36 n 48 TYR 36 A VAL 37 n 49 VAL 37 A LYS 38 n 50 LYS 38 A SER 39 n 51 SER 39 A ALA 40 n 52 ALA 40 A GLN 41 n 53 GLN 41 A GLY 42 n 54 GLY 42 A ASP 43 n 55 ASP 43 A ALA 44 n 56 ALA 44 A LEU 45 n 57 LEU 45 A PHE 46 n 58 PHE 46 A MSE 47 n 59 MSE 47 A LEU 48 n 60 LEU 48 A THR 49 n 61 THR 49 A LYS 50 n 62 LYS 50 A ASP 51 n 63 ASP 51 A MSE 52 n 64 MSE 52 A ASN 53 n 65 ASN 53 A GLN 54 n 66 GLN 54 A GLY 55 n 67 GLY 55 A SER 56 n 68 SER 56 A TYR 57 n 69 TYR 57 A GLN 58 n 70 GLN 58 A ARG 59 n 71 ARG 59 A PRO 60 n 72 PRO 60 A PRO 61 n 73 PRO 61 A SER 62 n 74 SER 62 A LEU 63 n 75 LEU 63 A GLN 64 n 76 GLN 64 A ASP 65 n 77 ASP 65 A GLY 66 n 78 GLY 66 A LYS 67 n 79 LYS 67 A ASN 68 n 80 ASN 68 A TYR 69 n 81 TYR 69 A GLN 70 n 82 GLN 70 A ASN 71 n 83 ASN 71 A TRP 72 n 84 TRP 72 A GLN 73 n 85 GLN 73 A THR 74 n 86 THR 74 A HIS 75 n 87 HIS 75 A THR 76 n 88 THR 76 A VAL 77 n 89 VAL 77 A GLU 78 n 90 GLU 78 A LEU 79 n 91 LEU 79 A VAL 80 n 92 VAL 80 A SER 81 n 93 SER 81 A TYR 82 n 94 TYR 82 A PRO 83 n 95 PRO 83 A CYS 84 n 96 CYS 84 A GLU 85 n 97 GLU 85 A MSE 86 n 98 MSE 86 A ASP 87 n 99 ASP 87 A ASP 88 n 100 ASP 88 A LYS 89 n 101 LYS 89 A ALA 90 n 102 ALA 90 A ALA 91 n 103 ALA 91 A VAL 92 n 104 VAL 92 A GLU 93 n 105 GLU 93 A THR 94 n 106 THR 94 A ARG 95 n 107 ARG 95 A LYS 96 n 108 LYS 96 A GLN 97 n 109 GLN 97 A ALA 98 n 110 ALA 98 A MSE 99 n 111 MSE 99 A LEU 100 n 112 LEU 100 A TRP 101 n 113 TRP 101 A LEU 102 n 114 LEU 102 A ALA 103 n 115 ALA 103 A THR 104 n 116 THR 104 A HIS 105 n 117 HIS 105 A PHE 106 n 118 PHE 106 A THR 107 n 119 THR 107 A THR 108 n 120 THR 108 A HIS 109 n 121 HIS 109 A ILE 110 n 122 ILE 110 A ASP 111 n 123 ASP 111 A GLN 112 n 124 GLN 112 A SER 113 n 125 SER 113 A ASN 114 n 126 ASN 114 A HIS 115 n 127 HIS 115 A GLN 116 n 128 GLN 116 A PRO 117 n 129 PRO 117 A LEU 118 n 130 LEU 118 A ALA 119 n 131 ALA 119 A PRO 120 n 132 PRO 120 A ILE 121 n 133 ILE 121 A GLN 122 n 134 GLN 122 A SER 123 n 135 SER 123 A GLU 124 n 136 GLU 124 A ASP 125 n 137 ASP 125 A GLY 126 n 138 GLY 126 A ARG 127 n 139 ARG 127 A PHE 128 n 140 PHE 128 A VAL 129 n 141 VAL 129 A ILE 130 n 142 ILE 130 A GLU 131 n 143 GLU 131 A ILE 132 n 144 ILE 132 A THR 133 n 145 THR 133 A ASN 134 n 146 ASN 134 A ALA 135 n 147 ALA 135 A LYS 136 n 148 LYS 136 A HIS 137 n 149 HIS 137 A VAL 138 n 150 VAL 138 A ILE 139 n 151 ILE 139 A ALA 140 n 152 ALA 140 A ALA 141 n 153 ALA 141 A GLY 142 n 154 GLY 142 A ASN 143 n 155 ASN 143 A GLY 144 n 156 GLY 144 A ILE 145 n 157 ILE 145 A SER 146 n 158 SER 146 A ALA 147 n 159 ALA 147 A GLU 148 n 160 GLU 148 A SER 149 n 161 SER 149 A GLN 150 n 162 GLN 150 A GLY 151 n 163 GLY 151 A GLN 152 n 164 GLN 152 A THR 153 n 165 THR 153 A ILE 154 n 166 ILE 154 A THR 155 n 167 THR 155 A MSE 156 n 168 MSE 156 A THR 157 n 169 THR 157 A PRO 158 n 170 PRO 158 A SER 159 n 171 SER 159 A GLY 160 n 172 GLY 160 A GLN 161 n 173 GLN 161 A GLN 162 n 174 GLN 162 A ALA 163 n 175 ALA 163 A THR 164 n 176 THR 164 A VAL 165 n 177 VAL 165 A GLY 166 n 178 GLY 166 A VAL 167 n 179 VAL 167 A ALA 168 n 180 ALA 168 A ALA 169 n 181 ALA 169 A LYS 170 n 182 LYS 170 A GLY 171 n 183 GLY 171 A PHE 172 n 184 PHE 172 A GLY 173 n 185 GLY 173 A THR 174 n 186 THR 174 A SER 175 n 187 SER 175 A ALA 176 n 188 ALA 176 A THR 177 n 189 THR 177 A PRO 178 n 190 PRO 178 A GLU 179 n 191 GLU 179 A LEU 180 n 192 LEU 180 A ARG 181 n 193 ARG 181 A LEU 182 n 194 LEU 182 A LEU 183 n 195 LEU 183 A GLU 184 n 196 GLU 184 A SER 185 n 197 SER 185 A ALA 186 n 198 ALA 186 A PRO 187 n 199 PRO 187 A TRP 188 n 200 TRP 188 A TYR 189 n 201 TYR 189 A GLN 190 n 202 GLN 190 A LYS 191 n 203 LYS 191 A SER 192 n 204 SER 192 A LEU 193 n 205 LEU 193 A LYS 194 n 206 LYS 194 A SER 195 n 207 SER 195 A GLN 196 n 208 GLN 196 A PHE 197 n 209 PHE 197 A ALA 198 n 210 ALA 198 A SER 199 n 211 SER 199 A LEU 200 n 212 LEU 200 A THR 201 n 213 THR 201 A SER 202 n 214 SER 202 A ALA 203 n 215 ALA 203 A GLU 204 n 216 GLU 204 A ASN 205 n 217 ASN 205 A LEU 206 n 218 LEU 206 A ASP 207 n 219 ASP 207 A ASP 208 n 220 ASP 208 A LYS 209 n 221 LYS 209 A GLU 210 n 222 GLU 210 A LEU 211 n 223 LEU 211 A ALA 212 n 224 ALA 212 A ALA 213 n 225 ALA 213 A ASN 214 n 226 ASN 214 A VAL 215 n 227 VAL 215 A PHE 216 n 228 PHE 216 A ALA 217 n 229 ALA 217 A TYR 218 n 230 TYR 218 A LEU 219 n 231 LEU 219 A THR 220 n 232 THR 220 A SER 221 n 233 SER 221 A ILE 222 n 234 ILE 222 A TYR 223 n 235 TYR 223 A LEU 224 n 236 LEU 224 A LYS 225 n 237 LYS 225 A THR 226 n 238 THR 226 A ALA 227 n 239 ALA 227 A GLU 228 n 240 GLU 228 A LEU 229 n 241 LEU 229 A ALA 230 n 242 ALA 230 A LYS 231 n 243 LYS 231 A LYS 232 n 244 LYS 232 A PHE 233 n 245 PHE 233 A GLY 234 n 246 GLY 234 A ILE 235 n 247 ILE 235 A TYR 236 n 248 TYR 236 A ILE 237 n 249 ILE 237 A ASN 238 n 250 ASN 238 A GLU 239 n 251 GLU 239 A TRP 240 n 252 TRP 240 A ASP 241 n 253 ASP 241 A PRO 242 n 254 PRO 242 A MSE 243 n 255 MSE 243 A SER 244 n 256 SER 244 A GLU 245 n 257 GLU 245 A GLN 246 n 258 GLN 246 A ILE 247 n 259 ILE 247 A THR 248 n 260 THR 248 A PRO 249 n 261 PRO 249 A ASN 250 n 262 ASN 250 A ALA 251 n 263 ALA 251 A ASN 252 n 264 ASN 252 A GLY 253 n 265 GLY 253 A LEU 254 n 266 LEU 254 A THR 255 n 267 THR 255 A ASP 256 n 268 ASP 256 A PRO 257 n 269 PRO 257 A LYS 258 n 270 LYS 258 A VAL 259 n 271 VAL 259 A LYS 260 n 272 LYS 260 A ASN 261 n 273 ASN 261 A ALA 262 n 274 ALA 262 A TRP 263 n 275 TRP 263 A GLU 264 n 276 GLU 264 A ILE 265 n 277 ILE 265 A LEU 266 n 278 LEU 266 A PRO 267 n 279 PRO 267 A ARG 268 n 280 ARG 268 A THR 269 n 281 THR 269 A LYS 270 n 282 LYS 270 A PRO 271 n 283 PRO 271 A SER 272 n 284 SER 272 A LYS 273 n 285 LYS 273 A ILE 274 n 286 ILE 274 A VAL 275 n 287 VAL 275 A GLU 276 n 288 GLU 276 A ILE 277 n 289 ILE 277 A LEU 278 n 290 LEU 278 A SER 279 n 291 SER 279 A LYS 280 n 292 LYS 280 A SER 281 n 293 SER 281 A ASP 282 n 294 ASP 282 A ALA 283 n 295 ALA 283 A LYS 284 n 296 LYS 284 A ALA 285 n 297 ALA 285 A VAL 286 n 298 VAL 286 A MSE 287 n 299 MSE 287 A LYS 288 n 300 LYS 288 A HIS 289 n 301 HIS 289 A ILE 290 n 302 ILE 290 A LYS 291 n 303 LYS 291 A PRO 292 n 304 PRO 292 A GLN 293 n 305 GLN 293 A LEU 294 n 306 LEU 294 A GLN 295 n 307 GLN 295 A SER 296 n 308 SER 296 A ARG 297 n 309 ARG 297 A TYR 298 n 310 TYR 298 A SER 299 n 311 SER 299 A GLU 300 n 312 GLU 300 A SER 301 n 313 SER 301 A LEU 302 n 314 LEU 302 A SER 303 n 315 SER 303 A LYS 304 n 316 LYS 304 A ASN 305 n 317 ASN 305 A VAL 306 n 318 VAL 306 A PHE 307 n 319 PHE 307 A GLN 308 n 320 GLN 308 A TYR 309 n 321 TYR 309 A PHE 310 n 322 PHE 310 A GLN 311 n 323 GLN 311 A ASP 312 n 324 ASP 312 A GLY 313 n 325 GLY 313 A GLY 314 n 326 GLY 314 A GLU 315 n 327 GLU 315 A VAL 316 n 328 VAL 316 A ALA 317 n 329 ALA 317 A GLY 318 n 330 GLY 318 A HIS 319 n 331 HIS 319 A GLY 320 n 332 GLY 320 A ILE 321 n 333 ILE 321 A ASN 322 n 334 ASN 322 A ASN 323 n 335 ASN 323 A ALA 324 n 336 ALA 324 A THR 325 n 337 THR 325 A VAL 326 n 338 VAL 326 A GLY 327 n 339 GLY 327 A ASP 328 n 340 ASP 328 A LYS 329 n 341 LYS 329 A HIS 330 n 342 HIS 330 A SER 331 n 343 SER 331 A PRO 332 n 344 PRO 332 A GLU 333 n 345 GLU 333 A LEU 334 n 346 LEU 334 A ALA 335 n 347 ALA 335 A ILE 336 n 348 ILE 336 A LEU 337 n 349 LEU 337 A PHE 338 n 350 PHE 338 A GLU 339 n 351 GLU 339 A PHE 340 n 352 PHE 340 A ARG 341 n 353 ARG 341 A THR 342 n 354 THR 342 A VAL 343 n 355 VAL 343 A PRO 344 n 356 PRO 344 A ASN 345 n 357 ASN 345 A GLU 346 n 358 GLU 346 A LEU 347 n 359 LEU 347 A GLN 348 n 360 GLN 348 A SER 349 n 361 SER 349 A TYR 350 n 362 TYR 350 A LEU 351 n 363 LEU 351 A PRO 352 n 364 PRO 352 A LYS 353 n 365 LYS 353 A THR 354 n 366 THR 354 A n 367 355 A n 368 356 A n 369 357 A n 370 358 A n 371 359 A n 372 360 A n 373 361 A n 374 362 A n 375 363 A n 376 364 A n 377 365 A n 378 366 A n 379 367 A n 380 368 A n 381 369 A n 382 370 A n 383 371 A n 384 372 A n 385 373 A n 386 374 A n 387 375 A n 388 376 A n 389 377 A n 390 378 A n 391 379 A n 392 380 A n 393 381 A n 394 382 A n 395 383 A n 396 384 A 0.1490 0.0302 -0.0092 0.0000 -0.0820 0.0000 0.0004 0.0013 0.0007 0.0040 -0.0005 -0.0003 0.0021 -0.0008 0.0001 0.0019 -0.0009 -0.0011 0.0094 0.0035 0.0045 refined 34.9854 85.2508 8.3804 X-RAY DIFFRACTION 2.5381 -0.1072 -0.0923 0.0000 0.3158 0.0000 0.0077 -0.0053 -0.0389 0.0329 0.0165 0.0088 0.0015 -0.0346 -0.0242 -0.0762 -0.0534 0.0024 0.0383 -0.0010 0.0092 refined 42.1127 90.5301 9.7313 X-RAY DIFFRACTION 0.4076 0.5694 0.4568 0.4955 0.4870 0.9341 -0.0008 0.0185 -0.0156 -0.0158 -0.0056 0.0077 -0.0009 -0.0104 0.0064 -0.0591 0.0487 -0.0636 0.0507 -0.0819 0.0236 refined 55.1245 87.4681 -8.0717 X-RAY DIFFRACTION 0.4154 -1.1413 0.6122 0.3304 -0.2086 1.1583 -0.0001 -0.0492 0.0145 -0.0013 -0.0083 -0.0134 -0.0046 -0.0629 0.0083 -0.0704 -0.0132 0.0467 0.0501 -0.0338 -0.0051 refined 44.8781 98.6148 11.8132 X-RAY DIFFRACTION 1.5100 -0.8149 0.2001 0.0002 0.5904 0.0000 0.0070 -0.0235 -0.0217 0.0072 -0.0128 -0.0032 -0.0011 0.0040 0.0058 -0.0291 0.0054 -0.0496 0.0225 -0.0584 0.0103 refined 54.7848 92.8268 9.1320 X-RAY DIFFRACTION 0.8305 -0.1464 2.3296 0.2844 -1.1314 1.3005 0.0041 -0.0049 0.0278 -0.0066 -0.0115 -0.0127 -0.0028 -0.0286 0.0074 -0.0604 0.0368 0.0285 0.0293 0.0432 -0.0175 refined 43.3511 99.7839 0.6172 X-RAY DIFFRACTION 0.8541 -0.4275 -0.7434 0.0000 0.1644 0.8466 0.0030 -0.0040 0.0104 -0.0066 -0.0023 0.0115 0.0030 0.0078 -0.0007 -0.1319 0.0476 0.0486 0.1625 0.0160 -0.0282 refined 10.0810 91.3101 12.9354 X-RAY DIFFRACTION 2.1316 -1.6644 1.2502 0.2171 -1.4322 0.2238 0.0101 -0.0041 -0.0024 0.0200 -0.0217 0.0056 0.0180 -0.0063 0.0116 -0.1058 0.0799 0.0084 0.1199 0.0699 -0.0246 refined 10.9281 85.0554 6.3434 X-RAY DIFFRACTION 1.0961 -0.4344 -0.6758 0.0173 0.7723 0.1146 -0.0008 -0.0004 -0.0183 -0.0023 -0.0018 -0.0080 0.0108 0.0135 0.0026 -0.0726 0.1362 0.0125 0.1075 0.0459 -0.0339 refined 20.0079 85.1268 -8.5924 X-RAY DIFFRACTION 1.1891 -0.9801 -0.7863 0.0000 -0.9087 0.9083 0.0065 0.0056 -0.0255 0.0155 -0.0195 0.0082 0.0450 -0.0106 0.0130 -0.0703 0.0998 0.0214 0.1128 0.0968 -0.0403 refined 12.0559 77.9882 4.7985 X-RAY DIFFRACTION 1.2825 -0.4993 0.0848 0.0000 -0.8121 0.0000 0.0047 0.0220 -0.0024 0.0174 -0.0071 -0.0054 0.0153 -0.0056 0.0024 -0.0285 0.0417 -0.0183 0.0828 0.0629 -0.0493 refined 26.2987 84.5268 15.6485 X-RAY DIFFRACTION 0.1073 -0.1232 0.0522 0.0152 -0.0113 0.0784 -0.0003 -0.0020 0.0016 -0.0010 0.0013 0.0010 -0.0047 -0.0014 -0.0010 -0.0143 0.0247 0.0022 0.0244 0.0067 -0.0027 refined 31.2556 104.1530 9.8240 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 A 10 A 17 X-RAY DIFFRACTION 2 A 18 A 63 X-RAY DIFFRACTION 3 A 64 A 88 X-RAY DIFFRACTION 4 A 89 A 126 X-RAY DIFFRACTION 5 A 127 A 153 X-RAY DIFFRACTION 6 A 154 A 180 X-RAY DIFFRACTION 7 A 181 A 216 X-RAY DIFFRACTION 8 A 217 A 246 X-RAY DIFFRACTION 9 A 247 A 279 X-RAY DIFFRACTION 10 A 280 A 329 X-RAY DIFFRACTION 11 A 330 A 353 X-RAY DIFFRACTION 12 A 354 A 354 author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric 3110 -8 29260 A MSE 26 SELENOMETHIONINE A MSE 38 MET A MSE 47 SELENOMETHIONINE A MSE 59 MET A MSE 52 SELENOMETHIONINE A MSE 64 MET A MSE 86 SELENOMETHIONINE A MSE 98 MET A MSE 99 SELENOMETHIONINE A MSE 111 MET A MSE 156 SELENOMETHIONINE A MSE 168 MET A MSE 243 SELENOMETHIONINE A MSE 255 MET A MSE 287 SELENOMETHIONINE A MSE 299 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_664 -y+1,-x+1,-z-1/4 crystal symmetry operation 128.0800000000 128.0800000000 -19.1300000000 A O VAL 138 A O VAL 150 A N ALA 25 A N ALA 37 A N MSE 26 A N MSE 38 A O GLN 73 A O GLN 85 A O THR 74 A O THR 86 A N GLN 54 A N GLN 66 A O LEU 48 A O LEU 60 A N GLY 35 A N GLY 47 A N TYR 36 A N TYR 48 A O GLU 131 A O GLU 143 A N PHE 8 A N PHE 20 A O GLY 327 A O GLY 339 A N VAL 326 A N VAL 338 A O GLU 333 A O GLU 345 A O GLU 339 A O GLU 351 A N LEU 266 A N LEU 278 A O GLY 166 A O GLY 178 A N SER 12 A N SER 24 A N ILE 13 A N ILE 25 A O CYS 84 A O CYS 96 1 A ASN -11 A ASN 1 1 Y 1 A ALA -10 A ALA 2 1 Y 1 A GLN -9 A GLN 3 1 Y 1 A PRO -8 A PRO 4 1 Y 1 A ASN -7 A ASN 5 1 Y 1 A LEU -6 A LEU 6 1 Y 1 A GLY -5 A GLY 7 1 Y 1 A ARG -4 A ARG 8 1 Y 1 A SER -3 A SER 9 1 Y 1 A GLU 355 A GLU 367 1 Y 1 A SER 356 A SER 368 1 Y 1 A THR 357 A THR 369 1 Y 1 A THR 358 A THR 370 1 Y 1 A LYS 359 A LYS 371 1 Y 1 A SER 360 A SER 372 1 Y 1 A GLU 361 A GLU 373 1 Y 1 A VAL 362 A VAL 374 1 Y 1 A LYS 363 A LYS 375 1 Y 1 A LEU 364 A LEU 376 1 Y 1 A LEU 365 A LEU 377 1 Y 1 A ASP 366 A ASP 378 1 Y 1 A GLN 367 A GLN 379 1 Y 1 A PHE 368 A PHE 380 1 Y 1 A ASP 369 A ASP 381 1 Y 1 A PRO 370 A PRO 382 1 Y 1 A MSE 371 A MSE 383 1 Y 1 A LYS 372 A LYS 384 1 Y 1 A ARG 373 A ARG 385 1 Y 1 A LYS 374 A LYS 386 1 Y 1 A THR 375 A THR 387 1 Y 1 A VAL 376 A VAL 388 1 Y 1 A ILE 377 A ILE 389 1 Y 1 A GLN 378 A GLN 390 1 Y 1 A GLN 379 A GLN 391 1 Y 1 A VAL 380 A VAL 392 1 Y 1 A GLU 381 A GLU 393 1 Y 1 A SER 382 A SER 394 1 Y 1 A LEU 383 A LEU 395 1 Y 1 A VAL 384 A VAL 396 1 Y 1 A LYS 10 -127.75 -57.51 1 A ASP 51 -117.03 -94.63 1 A ASN 68 -50.11 -80.91 1 A ASN 68 -52.31 -78.58 1 A SER 175 52.85 19.00 1 A ASN 238 52.07 -118.31 1 A GLU 264 70.01 -58.49 1 A ALA 317 -154.71 67.08 1 A HIS 319 -39.35 111.31 62.24 -10.00660 0.00000 0.00000 -10.00660 0.00000 20.01310 0.920 0.910 0.213 0.187 0.188 2.50 45.86 1154 22605 22605 5.110 RANDOM 1 THROUGHOUT 0.000 SAD Engh & Huber 0.34 2.50 45.86 160 2935 6 0 2769 0.010 2857 HARMONIC 2.000 1.18 3882 HARMONIC 2.000 985 SINUSOIDAL 2.000 81 HARMONIC 2.000 408 HARMONIC 5.000 2857 HARMONIC 20.000 2.96 20.15 0 384 SEMIHARMONIC 5.00 0 3396 SEMIHARMONIC 4.00 0.2900 0.2109 0.2146 2.62 144 2810 2954 11 4.87 64.05 2.500 49.100 4DTD 22710 0.000 0.07000 1 27.2000 17.300 100.0 0.56000 2.50 2.63 5.000 1 17.00 99.5 refinement BUSTER 2.9.2 VgrG protein Structure and functional characterization of a Vibrio cholerae toxin from the MARTX/VgrG family. 1 N N 2 N N 3 N N A PRO 60 A PRO 72 HELX_P A GLN 64 A GLN 76 5 1 5 A ASP 88 A ASP 100 HELX_P A SER 113 A SER 125 1 2 26 A LYS 170 A LYS 182 HELX_P A PHE 172 A PHE 184 5 3 3 A THR 177 A THR 189 HELX_P A SER 185 A SER 197 1 4 9 A SER 192 A SER 204 HELX_P A THR 201 A THR 213 1 5 10 A ASP 208 A ASP 220 HELX_P A GLY 234 A GLY 246 1 6 27 A ASP 241 A ASP 253 HELX_P A GLN 246 A GLN 258 5 7 6 A ASP 256 A ASP 268 HELX_P A GLU 264 A GLU 276 1 8 9 A LYS 270 A LYS 282 HELX_P A LEU 278 A LEU 290 5 9 9 A SER 279 A SER 291 HELX_P A SER 296 A SER 308 1 10 18 A SER 299 A SER 311 HELX_P A ASP 312 A ASP 324 1 11 14 A LEU 347 A LEU 359 HELX_P A LEU 351 A LEU 363 5 12 5 covale 1.318 A ALA 25 A C ALA 37 1_555 A MSE 26 A N MSE 38 1_555 covale 1.354 A MSE 26 A C MSE 38 1_555 A PRO 27 A N PRO 39 1_555 covale 1.321 A PHE 46 A C PHE 58 1_555 A MSE 47 A N MSE 59 1_555 covale 1.333 A MSE 47 A C MSE 59 1_555 A LEU 48 A N LEU 60 1_555 covale 1.328 A ASP 51 A C ASP 63 1_555 A MSE 52 A N MSE 64 1_555 covale 1.336 A MSE 52 A C MSE 64 1_555 A ASN 53 A N ASN 65 1_555 covale 1.344 A GLU 85 A C GLU 97 1_555 A MSE 86 A N MSE 98 1_555 covale 1.341 A MSE 86 A C MSE 98 1_555 A ASP 87 A N ASP 99 1_555 covale 1.342 A ALA 98 A C ALA 110 1_555 A MSE 99 A N MSE 111 1_555 covale 1.359 A MSE 99 A C MSE 111 1_555 A LEU 100 A N LEU 112 1_555 covale 1.352 A THR 155 A C THR 167 1_555 A MSE 156 A N MSE 168 1_555 covale 1.323 A MSE 156 A C MSE 168 1_555 A THR 157 A N THR 169 1_555 covale 1.350 A PRO 242 A C PRO 254 1_555 A MSE 243 A N MSE 255 1_555 covale 1.364 A MSE 243 A C MSE 255 1_555 A SER 244 A N SER 256 1_555 covale 1.336 A VAL 286 A C VAL 298 1_555 A MSE 287 A N MSE 299 1_555 covale 1.346 A MSE 287 A C MSE 299 1_555 A LYS 288 A N LYS 300 1_555 TOXIN Alpha-Beta protein, Actin Crosslinking Domain (ACD), G-Actin, TOXIN Q9KS45_VIBCH UNP 1 716 Q9KS45 NAQPNLGRSTKATPDFPTHFPKSSIGIENELAGLVVAMPANSAQKFGYVKSAQGDALFMLTKDMNQGSYQRPPSLQDGKN YQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAE SQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAE LAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQ YFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTESTTKSEVKLLDQFDPMKRKTVIQQVESLV 716 1111 4DTD -11 384 Q9KS45 A 1 1 396 10 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 138 A VAL 150 A ALA 141 A ALA 153 A LEU 22 A LEU 34 A PRO 27 A PRO 39 A TRP 72 A TRP 84 A SER 81 A SER 93 A ALA 44 A ALA 56 A SER 56 A SER 68 A LYS 33 A LYS 45 A SER 39 A SER 51 A PHE 128 A PHE 140 A ILE 132 A ILE 144 A HIS 7 A HIS 19 A PHE 8 A PHE 20 A THR 325 A THR 337 A GLY 327 A GLY 339 A PRO 332 A PRO 344 A PHE 340 A PHE 352 A ILE 265 A ILE 277 A PRO 267 A PRO 279 A GLN 161 A GLN 173 A ALA 168 A ALA 180 A SER 11 A SER 23 A GLU 18 A GLU 30 A CYS 84 A CYS 96 A GLU 85 A GLU 97 BINDING SITE FOR RESIDUE GOL A 401 Software 6 A LYS 50 A LYS 62 6 1_555 A GLY 55 A GLY 67 6 8_664 A SER 56 A SER 68 6 8_664 A HIS 75 A HIS 87 6 1_555 A HOH 535 C HOH 6 1_555 A HOH 641 C HOH 6 1_555 95 P 43 2 2