0.017377
0.000000
0.000283
0.000000
0.012825
0.000000
0.000000
0.000000
0.016737
0.000000
0.000000
0.000000
Li, X.
Zhang, R.
Boggon, T.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
90.930
90.000
57.548
77.970
59.757
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C10 H16 N5 O13 P3 S
539.246
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
P
N
138
N
O
N
139
N
S
N
140
N
O
N
141
N
O
N
142
S
P
N
143
N
O
N
144
N
O
N
145
S
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
C
N
151
R
C
N
152
N
O
N
153
S
C
N
154
N
O
N
155
R
C
N
156
N
O
N
157
R
C
Y
158
N
N
Y
159
N
C
Y
160
N
N
Y
161
N
C
N
162
N
C
N
163
N
O
N
164
N
N
N
165
N
C
N
166
N
N
N
167
N
N
Y
168
N
C
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
Y
190
N
C
Y
191
N
N
Y
192
N
C
Y
193
N
C
Y
194
N
N
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
S
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
N
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
S
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
MG
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
O
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
R
C
N
358
N
O
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
N
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
N
408
N
O
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
N
426
N
C
N
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
Y
163
N
sing
Y
164
N
sing
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
Y
169
N
doub
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
Y
190
N
sing
Y
191
N
doub
Y
192
N
doub
N
193
N
sing
Y
194
N
sing
N
195
N
sing
Y
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
doub
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
Y
298
N
doub
Y
299
N
sing
Y
300
N
sing
N
301
N
sing
Y
302
N
doub
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
doub
Y
372
N
sing
Y
373
N
sing
N
374
N
sing
Y
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
287
22317
22327
10.1074/jbc.M112.361295
22577140
Structural Basis for Small G Protein Effector Interaction of Ras-related Protein 1 (Rap1) and Adaptor Protein Krev Interaction Trapped 1 (KRIT1).
2012
10.2210/pdb4dxa/pdb
pdb_00004dxa
100
1
PIXEL
2012-02-16
PSI PILATUS 6M
Si
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
24-ID-C
APS
0.9795
SYNCHROTRON
APS BEAMLINE 24-ID-C
19206.719
Ras-related protein Rap-1b
3.6.5.2
G12V
1
man
polymer
37372.281
Krev interaction trapped protein 1
FERM domain
1
man
polymer
539.246
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
18.015
water
327
nat
water
GTP-binding protein smg p21B
Krev interaction trapped 1, Cerebral cavernous malformations 1 protein
no
no
GSMREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGF
ALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF
YDLVRQINR
GSMREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGF
ALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF
YDLVRQINR
A
polypeptide(L)
no
no
GSPEFEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAEL
TNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQG
FLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHK
VIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVKLLMKLNGQLMPTER
NS
GSPEFEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAEL
TNLDPQRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQG
FLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHK
VIPVYVGVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVKLLMKLNGQLMPTER
NS
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
OK/SW-cl.11, RAP1B, Ras-related protein Rap-1b (RAP1B)
9606
Homo sapiens
562
Escherichia coli
ROSETTA
PLASMID
modified pET-32
human
sample
CCM1, Krev interaction trapped protein 1 (KRIT1), KRIT1
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
PLASMID
pGEX 6p-1
1
2.37
48.08
VAPOR DIFFUSION, HANGING DROP
7.0
0.2M KNO3, 20% PEG3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-05-16
1
1
2012-05-23
1
2
2012-07-25
1
3
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-02-27
REL
REL
GSP
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
MG
MAGNESIUM ION
HOH
water
1C1Y
PDB entry 1C1Y
PDB
experimental model
GSP
1
3
GSP
GSP
201
A
MG
1
4
MG
MG
202
A
HOH
7
5
HOH
HOH
301
A
HOH
13
5
HOH
HOH
302
A
HOH
14
5
HOH
HOH
303
A
HOH
16
5
HOH
HOH
304
A
HOH
22
5
HOH
HOH
305
A
HOH
24
5
HOH
HOH
306
A
HOH
25
5
HOH
HOH
307
A
HOH
28
5
HOH
HOH
308
A
HOH
31
5
HOH
HOH
309
A
HOH
32
5
HOH
HOH
310
A
HOH
35
5
HOH
HOH
311
A
HOH
36
5
HOH
HOH
312
A
HOH
37
5
HOH
HOH
313
A
HOH
38
5
HOH
HOH
314
A
HOH
40
5
HOH
HOH
315
A
HOH
47
5
HOH
HOH
316
A
HOH
48
5
HOH
HOH
317
A
HOH
51
5
HOH
HOH
318
A
HOH
53
5
HOH
HOH
319
A
HOH
57
5
HOH
HOH
320
A
HOH
58
5
HOH
HOH
321
A
HOH
59
5
HOH
HOH
322
A
HOH
60
5
HOH
HOH
323
A
HOH
64
5
HOH
HOH
324
A
HOH
67
5
HOH
HOH
325
A
HOH
74
5
HOH
HOH
326
A
HOH
75
5
HOH
HOH
327
A
HOH
76
5
HOH
HOH
328
A
HOH
83
5
HOH
HOH
329
A
HOH
84
5
HOH
HOH
330
A
HOH
95
5
HOH
HOH
331
A
HOH
96
5
HOH
HOH
332
A
HOH
98
5
HOH
HOH
333
A
HOH
100
5
HOH
HOH
334
A
HOH
101
5
HOH
HOH
335
A
HOH
104
5
HOH
HOH
336
A
HOH
110
5
HOH
HOH
337
A
HOH
116
5
HOH
HOH
338
A
HOH
118
5
HOH
HOH
339
A
HOH
119
5
HOH
HOH
340
A
HOH
124
5
HOH
HOH
341
A
HOH
125
5
HOH
HOH
342
A
HOH
128
5
HOH
HOH
343
A
HOH
129
5
HOH
HOH
344
A
HOH
131
5
HOH
HOH
345
A
HOH
135
5
HOH
HOH
346
A
HOH
136
5
HOH
HOH
347
A
HOH
138
5
HOH
HOH
348
A
HOH
143
5
HOH
HOH
349
A
HOH
146
5
HOH
HOH
350
A
HOH
149
5
HOH
HOH
351
A
HOH
150
5
HOH
HOH
352
A
HOH
154
5
HOH
HOH
353
A
HOH
162
5
HOH
HOH
354
A
HOH
169
5
HOH
HOH
355
A
HOH
170
5
HOH
HOH
356
A
HOH
172
5
HOH
HOH
357
A
HOH
174
5
HOH
HOH
358
A
HOH
175
5
HOH
HOH
359
A
HOH
176
5
HOH
HOH
360
A
HOH
177
5
HOH
HOH
361
A
HOH
181
5
HOH
HOH
362
A
HOH
190
5
HOH
HOH
363
A
HOH
191
5
HOH
HOH
364
A
HOH
192
5
HOH
HOH
365
A
HOH
195
5
HOH
HOH
366
A
HOH
201
5
HOH
HOH
367
A
HOH
203
5
HOH
HOH
368
A
HOH
204
5
HOH
HOH
369
A
HOH
215
5
HOH
HOH
370
A
HOH
217
5
HOH
HOH
371
A
HOH
223
5
HOH
HOH
372
A
HOH
225
5
HOH
HOH
373
A
HOH
229
5
HOH
HOH
374
A
HOH
235
5
HOH
HOH
375
A
HOH
236
5
HOH
HOH
376
A
HOH
237
5
HOH
HOH
377
A
HOH
246
5
HOH
HOH
378
A
HOH
248
5
HOH
HOH
379
A
HOH
250
5
HOH
HOH
380
A
HOH
251
5
HOH
HOH
381
A
HOH
252
5
HOH
HOH
382
A
HOH
254
5
HOH
HOH
383
A
HOH
256
5
HOH
HOH
384
A
HOH
261
5
HOH
HOH
385
A
HOH
274
5
HOH
HOH
386
A
HOH
275
5
HOH
HOH
387
A
HOH
278
5
HOH
HOH
388
A
HOH
281
5
HOH
HOH
389
A
HOH
282
5
HOH
HOH
390
A
HOH
283
5
HOH
HOH
391
A
HOH
285
5
HOH
HOH
392
A
HOH
287
5
HOH
HOH
393
A
HOH
288
5
HOH
HOH
394
A
HOH
291
5
HOH
HOH
395
A
HOH
296
5
HOH
HOH
396
A
HOH
300
5
HOH
HOH
397
A
HOH
301
5
HOH
HOH
398
A
HOH
302
5
HOH
HOH
399
A
HOH
314
5
HOH
HOH
400
A
HOH
315
5
HOH
HOH
401
A
HOH
317
5
HOH
HOH
402
A
HOH
319
5
HOH
HOH
403
A
HOH
321
5
HOH
HOH
404
A
HOH
325
5
HOH
HOH
405
A
HOH
326
5
HOH
HOH
406
A
HOH
327
5
HOH
HOH
407
A
HOH
1
5
HOH
HOH
801
B
HOH
2
5
HOH
HOH
802
B
HOH
3
5
HOH
HOH
803
B
HOH
4
5
HOH
HOH
804
B
HOH
5
5
HOH
HOH
805
B
HOH
6
5
HOH
HOH
806
B
HOH
8
5
HOH
HOH
807
B
HOH
9
5
HOH
HOH
808
B
HOH
10
5
HOH
HOH
809
B
HOH
11
5
HOH
HOH
810
B
HOH
12
5
HOH
HOH
811
B
HOH
15
5
HOH
HOH
812
B
HOH
17
5
HOH
HOH
813
B
HOH
18
5
HOH
HOH
814
B
HOH
19
5
HOH
HOH
815
B
HOH
20
5
HOH
HOH
816
B
HOH
21
5
HOH
HOH
817
B
HOH
23
5
HOH
HOH
818
B
HOH
26
5
HOH
HOH
819
B
HOH
27
5
HOH
HOH
820
B
HOH
29
5
HOH
HOH
821
B
HOH
30
5
HOH
HOH
822
B
HOH
33
5
HOH
HOH
823
B
HOH
34
5
HOH
HOH
824
B
HOH
39
5
HOH
HOH
825
B
HOH
41
5
HOH
HOH
826
B
HOH
42
5
HOH
HOH
827
B
HOH
43
5
HOH
HOH
828
B
HOH
44
5
HOH
HOH
829
B
HOH
45
5
HOH
HOH
830
B
HOH
46
5
HOH
HOH
831
B
HOH
49
5
HOH
HOH
832
B
HOH
50
5
HOH
HOH
833
B
HOH
52
5
HOH
HOH
834
B
HOH
54
5
HOH
HOH
835
B
HOH
55
5
HOH
HOH
836
B
HOH
56
5
HOH
HOH
837
B
HOH
61
5
HOH
HOH
838
B
HOH
62
5
HOH
HOH
839
B
HOH
63
5
HOH
HOH
840
B
HOH
65
5
HOH
HOH
841
B
HOH
66
5
HOH
HOH
842
B
HOH
68
5
HOH
HOH
843
B
HOH
69
5
HOH
HOH
844
B
HOH
70
5
HOH
HOH
845
B
HOH
71
5
HOH
HOH
846
B
HOH
72
5
HOH
HOH
847
B
HOH
73
5
HOH
HOH
848
B
HOH
77
5
HOH
HOH
849
B
HOH
78
5
HOH
HOH
850
B
HOH
79
5
HOH
HOH
851
B
HOH
80
5
HOH
HOH
852
B
HOH
81
5
HOH
HOH
853
B
HOH
82
5
HOH
HOH
854
B
HOH
85
5
HOH
HOH
855
B
HOH
86
5
HOH
HOH
856
B
HOH
87
5
HOH
HOH
857
B
HOH
88
5
HOH
HOH
858
B
HOH
89
5
HOH
HOH
859
B
HOH
90
5
HOH
HOH
860
B
HOH
91
5
HOH
HOH
861
B
HOH
92
5
HOH
HOH
862
B
HOH
93
5
HOH
HOH
863
B
HOH
94
5
HOH
HOH
864
B
HOH
97
5
HOH
HOH
865
B
HOH
99
5
HOH
HOH
866
B
HOH
102
5
HOH
HOH
867
B
HOH
103
5
HOH
HOH
868
B
HOH
105
5
HOH
HOH
869
B
HOH
106
5
HOH
HOH
870
B
HOH
107
5
HOH
HOH
871
B
HOH
108
5
HOH
HOH
872
B
HOH
109
5
HOH
HOH
873
B
HOH
111
5
HOH
HOH
874
B
HOH
112
5
HOH
HOH
875
B
HOH
113
5
HOH
HOH
876
B
HOH
114
5
HOH
HOH
877
B
HOH
115
5
HOH
HOH
878
B
HOH
117
5
HOH
HOH
879
B
HOH
120
5
HOH
HOH
880
B
HOH
121
5
HOH
HOH
881
B
HOH
122
5
HOH
HOH
882
B
HOH
123
5
HOH
HOH
883
B
HOH
126
5
HOH
HOH
884
B
HOH
127
5
HOH
HOH
885
B
HOH
130
5
HOH
HOH
886
B
HOH
132
5
HOH
HOH
887
B
HOH
133
5
HOH
HOH
888
B
HOH
134
5
HOH
HOH
889
B
HOH
137
5
HOH
HOH
890
B
HOH
139
5
HOH
HOH
891
B
HOH
140
5
HOH
HOH
892
B
HOH
141
5
HOH
HOH
893
B
HOH
142
5
HOH
HOH
894
B
HOH
144
5
HOH
HOH
895
B
HOH
145
5
HOH
HOH
896
B
HOH
147
5
HOH
HOH
897
B
HOH
148
5
HOH
HOH
898
B
HOH
151
5
HOH
HOH
899
B
HOH
152
5
HOH
HOH
900
B
HOH
153
5
HOH
HOH
901
B
HOH
155
5
HOH
HOH
902
B
HOH
156
5
HOH
HOH
903
B
HOH
157
5
HOH
HOH
904
B
HOH
158
5
HOH
HOH
905
B
HOH
159
5
HOH
HOH
906
B
HOH
160
5
HOH
HOH
907
B
HOH
161
5
HOH
HOH
908
B
HOH
163
5
HOH
HOH
909
B
HOH
164
5
HOH
HOH
910
B
HOH
165
5
HOH
HOH
911
B
HOH
166
5
HOH
HOH
912
B
HOH
167
5
HOH
HOH
913
B
HOH
168
5
HOH
HOH
914
B
HOH
171
5
HOH
HOH
915
B
HOH
173
5
HOH
HOH
916
B
HOH
178
5
HOH
HOH
917
B
HOH
179
5
HOH
HOH
918
B
HOH
180
5
HOH
HOH
919
B
HOH
182
5
HOH
HOH
920
B
HOH
183
5
HOH
HOH
921
B
HOH
184
5
HOH
HOH
922
B
HOH
185
5
HOH
HOH
923
B
HOH
186
5
HOH
HOH
924
B
HOH
187
5
HOH
HOH
925
B
HOH
188
5
HOH
HOH
926
B
HOH
189
5
HOH
HOH
927
B
HOH
193
5
HOH
HOH
928
B
HOH
194
5
HOH
HOH
929
B
HOH
196
5
HOH
HOH
930
B
HOH
197
5
HOH
HOH
931
B
HOH
198
5
HOH
HOH
932
B
HOH
199
5
HOH
HOH
933
B
HOH
200
5
HOH
HOH
934
B
HOH
202
5
HOH
HOH
935
B
HOH
205
5
HOH
HOH
936
B
HOH
206
5
HOH
HOH
937
B
HOH
207
5
HOH
HOH
938
B
HOH
208
5
HOH
HOH
939
B
HOH
209
5
HOH
HOH
940
B
HOH
210
5
HOH
HOH
941
B
HOH
211
5
HOH
HOH
942
B
HOH
212
5
HOH
HOH
943
B
HOH
213
5
HOH
HOH
944
B
HOH
214
5
HOH
HOH
945
B
HOH
216
5
HOH
HOH
946
B
HOH
218
5
HOH
HOH
947
B
HOH
219
5
HOH
HOH
948
B
HOH
220
5
HOH
HOH
949
B
HOH
221
5
HOH
HOH
950
B
HOH
222
5
HOH
HOH
951
B
HOH
224
5
HOH
HOH
952
B
HOH
226
5
HOH
HOH
953
B
HOH
227
5
HOH
HOH
954
B
HOH
228
5
HOH
HOH
955
B
HOH
230
5
HOH
HOH
956
B
HOH
231
5
HOH
HOH
957
B
HOH
232
5
HOH
HOH
958
B
HOH
233
5
HOH
HOH
959
B
HOH
234
5
HOH
HOH
960
B
HOH
238
5
HOH
HOH
961
B
HOH
239
5
HOH
HOH
962
B
HOH
240
5
HOH
HOH
963
B
HOH
241
5
HOH
HOH
964
B
HOH
242
5
HOH
HOH
965
B
HOH
243
5
HOH
HOH
966
B
HOH
244
5
HOH
HOH
967
B
HOH
245
5
HOH
HOH
968
B
HOH
247
5
HOH
HOH
969
B
HOH
249
5
HOH
HOH
970
B
HOH
253
5
HOH
HOH
971
B
HOH
255
5
HOH
HOH
972
B
HOH
257
5
HOH
HOH
973
B
HOH
258
5
HOH
HOH
974
B
HOH
259
5
HOH
HOH
975
B
HOH
260
5
HOH
HOH
976
B
HOH
262
5
HOH
HOH
977
B
HOH
263
5
HOH
HOH
978
B
HOH
264
5
HOH
HOH
979
B
HOH
265
5
HOH
HOH
980
B
HOH
266
5
HOH
HOH
981
B
HOH
267
5
HOH
HOH
982
B
HOH
268
5
HOH
HOH
983
B
HOH
269
5
HOH
HOH
984
B
HOH
270
5
HOH
HOH
985
B
HOH
271
5
HOH
HOH
986
B
HOH
272
5
HOH
HOH
987
B
HOH
273
5
HOH
HOH
988
B
HOH
276
5
HOH
HOH
989
B
HOH
277
5
HOH
HOH
990
B
HOH
279
5
HOH
HOH
991
B
HOH
280
5
HOH
HOH
992
B
HOH
284
5
HOH
HOH
993
B
HOH
286
5
HOH
HOH
994
B
HOH
289
5
HOH
HOH
995
B
HOH
290
5
HOH
HOH
996
B
HOH
292
5
HOH
HOH
997
B
HOH
293
5
HOH
HOH
998
B
HOH
294
5
HOH
HOH
999
B
HOH
295
5
HOH
HOH
1000
B
HOH
297
5
HOH
HOH
1001
B
HOH
298
5
HOH
HOH
1002
B
HOH
299
5
HOH
HOH
1003
B
HOH
303
5
HOH
HOH
1004
B
HOH
304
5
HOH
HOH
1005
B
HOH
305
5
HOH
HOH
1006
B
HOH
306
5
HOH
HOH
1007
B
HOH
307
5
HOH
HOH
1008
B
HOH
308
5
HOH
HOH
1009
B
HOH
309
5
HOH
HOH
1010
B
HOH
310
5
HOH
HOH
1011
B
HOH
311
5
HOH
HOH
1012
B
HOH
312
5
HOH
HOH
1013
B
HOH
313
5
HOH
HOH
1014
B
HOH
316
5
HOH
HOH
1015
B
HOH
318
5
HOH
HOH
1016
B
HOH
320
5
HOH
HOH
1017
B
HOH
322
5
HOH
HOH
1018
B
HOH
323
5
HOH
HOH
1019
B
HOH
324
5
HOH
HOH
1020
B
n
1
-1
A
SER
0
n
2
SER
0
A
MET
1
n
3
MET
1
A
ARG
2
n
4
ARG
2
A
GLU
3
n
5
GLU
3
A
TYR
4
n
6
TYR
4
A
LYS
5
n
7
LYS
5
A
LEU
6
n
8
LEU
6
A
VAL
7
n
9
VAL
7
A
VAL
8
n
10
VAL
8
A
LEU
9
n
11
LEU
9
A
GLY
10
n
12
GLY
10
A
SER
11
n
13
SER
11
A
VAL
12
n
14
VAL
12
A
GLY
13
n
15
GLY
13
A
VAL
14
n
16
VAL
14
A
GLY
15
n
17
GLY
15
A
LYS
16
n
18
LYS
16
A
SER
17
n
19
SER
17
A
ALA
18
n
20
ALA
18
A
LEU
19
n
21
LEU
19
A
THR
20
n
22
THR
20
A
VAL
21
n
23
VAL
21
A
GLN
22
n
24
GLN
22
A
PHE
23
n
25
PHE
23
A
VAL
24
n
26
VAL
24
A
GLN
25
n
27
GLN
25
A
GLY
26
n
28
GLY
26
A
ILE
27
n
29
ILE
27
A
PHE
28
n
30
PHE
28
A
VAL
29
n
31
VAL
29
A
GLU
30
n
32
GLU
30
A
LYS
31
n
33
LYS
31
A
TYR
32
n
34
TYR
32
A
ASP
33
n
35
ASP
33
A
PRO
34
n
36
PRO
34
A
THR
35
n
37
THR
35
A
ILE
36
n
38
ILE
36
A
GLU
37
n
39
GLU
37
A
ASP
38
n
40
ASP
38
A
SER
39
n
41
SER
39
A
TYR
40
n
42
TYR
40
A
ARG
41
n
43
ARG
41
A
LYS
42
n
44
LYS
42
A
GLN
43
n
45
GLN
43
A
VAL
44
n
46
VAL
44
A
GLU
45
n
47
GLU
45
A
VAL
46
n
48
VAL
46
A
ASP
47
n
49
ASP
47
A
ALA
48
n
50
ALA
48
A
GLN
49
n
51
GLN
49
A
GLN
50
n
52
GLN
50
A
CYS
51
n
53
CYS
51
A
MET
52
n
54
MET
52
A
LEU
53
n
55
LEU
53
A
GLU
54
n
56
GLU
54
A
ILE
55
n
57
ILE
55
A
LEU
56
n
58
LEU
56
A
ASP
57
n
59
ASP
57
A
THR
58
n
60
THR
58
A
ALA
59
n
61
ALA
59
A
GLY
60
n
62
GLY
60
A
THR
61
n
63
THR
61
A
GLU
62
n
64
GLU
62
A
GLN
63
n
65
GLN
63
A
PHE
64
n
66
PHE
64
A
THR
65
n
67
THR
65
A
ALA
66
n
68
ALA
66
A
MET
67
n
69
MET
67
A
ARG
68
n
70
ARG
68
A
ASP
69
n
71
ASP
69
A
LEU
70
n
72
LEU
70
A
TYR
71
n
73
TYR
71
A
MET
72
n
74
MET
72
A
LYS
73
n
75
LYS
73
A
ASN
74
n
76
ASN
74
A
GLY
75
n
77
GLY
75
A
GLN
76
n
78
GLN
76
A
GLY
77
n
79
GLY
77
A
PHE
78
n
80
PHE
78
A
ALA
79
n
81
ALA
79
A
LEU
80
n
82
LEU
80
A
VAL
81
n
83
VAL
81
A
TYR
82
n
84
TYR
82
A
SER
83
n
85
SER
83
A
ILE
84
n
86
ILE
84
A
THR
85
n
87
THR
85
A
ALA
86
n
88
ALA
86
A
GLN
87
n
89
GLN
87
A
SER
88
n
90
SER
88
A
THR
89
n
91
THR
89
A
PHE
90
n
92
PHE
90
A
ASN
91
n
93
ASN
91
A
ASP
92
n
94
ASP
92
A
LEU
93
n
95
LEU
93
A
GLN
94
n
96
GLN
94
A
ASP
95
n
97
ASP
95
A
LEU
96
n
98
LEU
96
A
ARG
97
n
99
ARG
97
A
GLU
98
n
100
GLU
98
A
GLN
99
n
101
GLN
99
A
ILE
100
n
102
ILE
100
A
LEU
101
n
103
LEU
101
A
ARG
102
n
104
ARG
102
A
VAL
103
n
105
VAL
103
A
LYS
104
n
106
LYS
104
A
ASP
105
n
107
ASP
105
A
THR
106
n
108
THR
106
A
ASP
107
n
109
ASP
107
A
ASP
108
n
110
ASP
108
A
VAL
109
n
111
VAL
109
A
PRO
110
n
112
PRO
110
A
MET
111
n
113
MET
111
A
ILE
112
n
114
ILE
112
A
LEU
113
n
115
LEU
113
A
VAL
114
n
116
VAL
114
A
GLY
115
n
117
GLY
115
A
ASN
116
n
118
ASN
116
A
LYS
117
n
119
LYS
117
A
CYS
118
n
120
CYS
118
A
ASP
119
n
121
ASP
119
A
LEU
120
n
122
LEU
120
A
GLU
121
n
123
GLU
121
A
ASP
122
n
124
ASP
122
A
GLU
123
n
125
GLU
123
A
ARG
124
n
126
ARG
124
A
VAL
125
n
127
VAL
125
A
VAL
126
n
128
VAL
126
A
GLY
127
n
129
GLY
127
A
LYS
128
n
130
LYS
128
A
GLU
129
n
131
GLU
129
A
GLN
130
n
132
GLN
130
A
GLY
131
n
133
GLY
131
A
GLN
132
n
134
GLN
132
A
ASN
133
n
135
ASN
133
A
LEU
134
n
136
LEU
134
A
ALA
135
n
137
ALA
135
A
ARG
136
n
138
ARG
136
A
GLN
137
n
139
GLN
137
A
TRP
138
n
140
TRP
138
A
ASN
139
n
141
ASN
139
A
ASN
140
n
142
ASN
140
A
CYS
141
n
143
CYS
141
A
ALA
142
n
144
ALA
142
A
PHE
143
n
145
PHE
143
A
LEU
144
n
146
LEU
144
A
GLU
145
n
147
GLU
145
A
SER
146
n
148
SER
146
A
SER
147
n
149
SER
147
A
ALA
148
n
150
ALA
148
A
LYS
149
n
151
LYS
149
A
SER
150
n
152
SER
150
A
LYS
151
n
153
LYS
151
A
ILE
152
n
154
ILE
152
A
ASN
153
n
155
ASN
153
A
VAL
154
n
156
VAL
154
A
ASN
155
n
157
ASN
155
A
GLU
156
n
158
GLU
156
A
ILE
157
n
159
ILE
157
A
PHE
158
n
160
PHE
158
A
TYR
159
n
161
TYR
159
A
ASP
160
n
162
ASP
160
A
LEU
161
n
163
LEU
161
A
VAL
162
n
164
VAL
162
A
ARG
163
n
165
ARG
163
A
GLN
164
n
166
GLN
164
A
ILE
165
n
167
ILE
165
A
ASN
166
n
168
ASN
166
A
ARG
167
n
169
ARG
167
A
n
1
415
B
n
2
416
B
n
3
417
B
n
4
418
B
PHE
419
n
5
PHE
419
B
GLU
420
n
6
GLU
420
B
LYS
421
n
7
LYS
421
B
VAL
422
n
8
VAL
422
B
ARG
423
n
9
ARG
423
B
ILE
424
n
10
ILE
424
B
TYR
425
n
11
TYR
425
B
ARG
426
n
12
ARG
426
B
MET
427
n
13
MET
427
B
ASP
428
n
14
ASP
428
B
GLY
429
n
15
GLY
429
B
SER
430
n
16
SER
430
B
TYR
431
n
17
TYR
431
B
ARG
432
n
18
ARG
432
B
SER
433
n
19
SER
433
B
VAL
434
n
20
VAL
434
B
GLU
435
n
21
GLU
435
B
LEU
436
n
22
LEU
436
B
LYS
437
n
23
LYS
437
B
HIS
438
n
24
HIS
438
B
GLY
439
n
25
GLY
439
B
ASN
440
n
26
ASN
440
B
ASN
441
n
27
ASN
441
B
THR
442
n
28
THR
442
B
THR
443
n
29
THR
443
B
VAL
444
n
30
VAL
444
B
GLN
445
n
31
GLN
445
B
GLN
446
n
32
GLN
446
B
ILE
447
n
33
ILE
447
B
MET
448
n
34
MET
448
B
GLU
449
n
35
GLU
449
B
GLY
450
n
36
GLY
450
B
MET
451
n
37
MET
451
B
ARG
452
n
38
ARG
452
B
LEU
453
n
39
LEU
453
B
SER
454
n
40
SER
454
B
GLN
455
n
41
GLN
455
B
GLU
456
n
42
GLU
456
B
THR
457
n
43
THR
457
B
GLN
458
n
44
GLN
458
B
GLN
459
n
45
GLN
459
B
TYR
460
n
46
TYR
460
B
PHE
461
n
47
PHE
461
B
THR
462
n
48
THR
462
B
ILE
463
n
49
ILE
463
B
TRP
464
n
50
TRP
464
B
ILE
465
n
51
ILE
465
B
CYS
466
n
52
CYS
466
B
SER
467
n
53
SER
467
B
GLU
468
n
54
GLU
468
B
ASN
469
n
55
ASN
469
B
LEU
470
n
56
LEU
470
B
SER
471
n
57
SER
471
B
LEU
472
n
58
LEU
472
B
GLN
473
n
59
GLN
473
B
LEU
474
n
60
LEU
474
B
LYS
475
n
61
LYS
475
B
PRO
476
n
62
PRO
476
B
TYR
477
n
63
TYR
477
B
HIS
478
n
64
HIS
478
B
LYS
479
n
65
LYS
479
B
PRO
480
n
66
PRO
480
B
LEU
481
n
67
LEU
481
B
GLN
482
n
68
GLN
482
B
HIS
483
n
69
HIS
483
B
VAL
484
n
70
VAL
484
B
ARG
485
n
71
ARG
485
B
ASP
486
n
72
ASP
486
B
TRP
487
n
73
TRP
487
B
PRO
488
n
74
PRO
488
B
GLU
489
n
75
GLU
489
B
ILE
490
n
76
ILE
490
B
LEU
491
n
77
LEU
491
B
ALA
492
n
78
ALA
492
B
GLU
493
n
79
GLU
493
B
LEU
494
n
80
LEU
494
B
THR
495
n
81
THR
495
B
ASN
496
n
82
ASN
496
B
LEU
497
n
83
LEU
497
B
ASP
498
n
84
ASP
498
B
PRO
499
n
85
PRO
499
B
GLN
500
n
86
GLN
500
B
ARG
501
n
87
ARG
501
B
GLU
502
n
88
GLU
502
B
THR
503
n
89
THR
503
B
PRO
504
n
90
PRO
504
B
GLN
505
n
91
GLN
505
B
LEU
506
n
92
LEU
506
B
PHE
507
n
93
PHE
507
B
LEU
508
n
94
LEU
508
B
ARG
509
n
95
ARG
509
B
ARG
510
n
96
ARG
510
B
ASP
511
n
97
ASP
511
B
VAL
512
n
98
VAL
512
B
ARG
513
n
99
ARG
513
B
LEU
514
n
100
LEU
514
B
PRO
515
n
101
PRO
515
B
LEU
516
n
102
LEU
516
B
GLU
517
n
103
GLU
517
B
VAL
518
n
104
VAL
518
B
GLU
519
n
105
GLU
519
B
LYS
520
n
106
LYS
520
B
GLN
521
n
107
GLN
521
B
ILE
522
n
108
ILE
522
B
GLU
523
n
109
GLU
523
B
ASP
524
n
110
ASP
524
B
PRO
525
n
111
PRO
525
B
LEU
526
n
112
LEU
526
B
ALA
527
n
113
ALA
527
B
ILE
528
n
114
ILE
528
B
LEU
529
n
115
LEU
529
B
ILE
530
n
116
ILE
530
B
LEU
531
n
117
LEU
531
B
PHE
532
n
118
PHE
532
B
ASP
533
n
119
ASP
533
B
GLU
534
n
120
GLU
534
B
ALA
535
n
121
ALA
535
B
ARG
536
n
122
ARG
536
B
TYR
537
n
123
TYR
537
B
ASN
538
n
124
ASN
538
B
LEU
539
n
125
LEU
539
B
LEU
540
n
126
LEU
540
B
LYS
541
n
127
LYS
541
B
GLY
542
n
128
GLY
542
B
PHE
543
n
129
PHE
543
B
TYR
544
n
130
TYR
544
B
THR
545
n
131
THR
545
B
ALA
546
n
132
ALA
546
B
PRO
547
n
133
PRO
547
B
ASP
548
n
134
ASP
548
B
ALA
549
n
135
ALA
549
B
LYS
550
n
136
LYS
550
B
LEU
551
n
137
LEU
551
B
ILE
552
n
138
ILE
552
B
THR
553
n
139
THR
553
B
LEU
554
n
140
LEU
554
B
ALA
555
n
141
ALA
555
B
SER
556
n
142
SER
556
B
LEU
557
n
143
LEU
557
B
LEU
558
n
144
LEU
558
B
LEU
559
n
145
LEU
559
B
GLN
560
n
146
GLN
560
B
ILE
561
n
147
ILE
561
B
VAL
562
n
148
VAL
562
B
TYR
563
n
149
TYR
563
B
GLY
564
n
150
GLY
564
B
ASN
565
n
151
ASN
565
B
TYR
566
n
152
TYR
566
B
GLU
567
n
153
GLU
567
B
SER
568
n
154
SER
568
B
LYS
569
n
155
LYS
569
B
LYS
570
n
156
LYS
570
B
HIS
571
n
157
HIS
571
B
LYS
572
n
158
LYS
572
B
GLN
573
n
159
GLN
573
B
GLY
574
n
160
GLY
574
B
PHE
575
n
161
PHE
575
B
LEU
576
n
162
LEU
576
B
ASN
577
n
163
ASN
577
B
GLU
578
n
164
GLU
578
B
GLU
579
n
165
GLU
579
B
ASN
580
n
166
ASN
580
B
LEU
581
n
167
LEU
581
B
LYS
582
n
168
LYS
582
B
SER
583
n
169
SER
583
B
ILE
584
n
170
ILE
584
B
VAL
585
n
171
VAL
585
B
PRO
586
n
172
PRO
586
B
VAL
587
n
173
VAL
587
B
THR
588
n
174
THR
588
B
LYS
589
n
175
LYS
589
B
LEU
590
n
176
LEU
590
B
LYS
591
n
177
LYS
591
B
SER
592
n
178
SER
592
B
LYS
593
n
179
LYS
593
B
ALA
594
n
180
ALA
594
B
PRO
595
n
181
PRO
595
B
HIS
596
n
182
HIS
596
B
TRP
597
n
183
TRP
597
B
THR
598
n
184
THR
598
B
ASN
599
n
185
ASN
599
B
ARG
600
n
186
ARG
600
B
ILE
601
n
187
ILE
601
B
LEU
602
n
188
LEU
602
B
HIS
603
n
189
HIS
603
B
GLU
604
n
190
GLU
604
B
TYR
605
n
191
TYR
605
B
LYS
606
n
192
LYS
606
B
ASN
607
n
193
ASN
607
B
LEU
608
n
194
LEU
608
B
SER
609
n
195
SER
609
B
THR
610
n
196
THR
610
B
n
197
611
B
n
198
612
B
GLY
613
n
199
GLY
613
B
VAL
614
n
200
VAL
614
B
SER
615
n
201
SER
615
B
LYS
616
n
202
LYS
616
B
GLU
617
n
203
GLU
617
B
MET
618
n
204
MET
618
B
HIS
619
n
205
HIS
619
B
HIS
620
n
206
HIS
620
B
LEU
621
n
207
LEU
621
B
GLN
622
n
208
GLN
622
B
ARG
623
n
209
ARG
623
B
MET
624
n
210
MET
624
B
PHE
625
n
211
PHE
625
B
LEU
626
n
212
LEU
626
B
GLN
627
n
213
GLN
627
B
ASN
628
n
214
ASN
628
B
CYS
629
n
215
CYS
629
B
TRP
630
n
216
TRP
630
B
GLU
631
n
217
GLU
631
B
ILE
632
n
218
ILE
632
B
PRO
633
n
219
PRO
633
B
THR
634
n
220
THR
634
B
TYR
635
n
221
TYR
635
B
GLY
636
n
222
GLY
636
B
ALA
637
n
223
ALA
637
B
ALA
638
n
224
ALA
638
B
PHE
639
n
225
PHE
639
B
PHE
640
n
226
PHE
640
B
THR
641
n
227
THR
641
B
GLY
642
n
228
GLY
642
B
GLN
643
n
229
GLN
643
B
ILE
644
n
230
ILE
644
B
PHE
645
n
231
PHE
645
B
THR
646
n
232
THR
646
B
n
233
647
B
n
234
648
B
n
235
649
B
n
236
650
B
n
237
651
B
n
238
652
B
n
239
653
B
LYS
654
n
240
LYS
654
B
VAL
655
n
241
VAL
655
B
ILE
656
n
242
ILE
656
B
PRO
657
n
243
PRO
657
B
VAL
658
n
244
VAL
658
B
TYR
659
n
245
TYR
659
B
VAL
660
n
246
VAL
660
B
GLY
661
n
247
GLY
661
B
VAL
662
n
248
VAL
662
B
ASN
663
n
249
ASN
663
B
ILE
664
n
250
ILE
664
B
LYS
665
n
251
LYS
665
B
GLY
666
n
252
GLY
666
B
LEU
667
n
253
LEU
667
B
HIS
668
n
254
HIS
668
B
LEU
669
n
255
LEU
669
B
LEU
670
n
256
LEU
670
B
ASN
671
n
257
ASN
671
B
MET
672
n
258
MET
672
B
GLU
673
n
259
GLU
673
B
THR
674
n
260
THR
674
B
LYS
675
n
261
LYS
675
B
ALA
676
n
262
ALA
676
B
LEU
677
n
263
LEU
677
B
LEU
678
n
264
LEU
678
B
ILE
679
n
265
ILE
679
B
SER
680
n
266
SER
680
B
LEU
681
n
267
LEU
681
B
LYS
682
n
268
LYS
682
B
TYR
683
n
269
TYR
683
B
GLY
684
n
270
GLY
684
B
CYS
685
n
271
CYS
685
B
PHE
686
n
272
PHE
686
B
MET
687
n
273
MET
687
B
TRP
688
n
274
TRP
688
B
GLN
689
n
275
GLN
689
B
LEU
690
n
276
LEU
690
B
GLY
691
n
277
GLY
691
B
ASP
692
n
278
ASP
692
B
THR
693
n
279
THR
693
B
ASP
694
n
280
ASP
694
B
THR
695
n
281
THR
695
B
CYS
696
n
282
CYS
696
B
PHE
697
n
283
PHE
697
B
GLN
698
n
284
GLN
698
B
ILE
699
n
285
ILE
699
B
HIS
700
n
286
HIS
700
B
SER
701
n
287
SER
701
B
MET
702
n
288
MET
702
B
GLU
703
n
289
GLU
703
B
ASN
704
n
290
ASN
704
B
LYS
705
n
291
LYS
705
B
MET
706
n
292
MET
706
B
SER
707
n
293
SER
707
B
PHE
708
n
294
PHE
708
B
ILE
709
n
295
ILE
709
B
VAL
710
n
296
VAL
710
B
HIS
711
n
297
HIS
711
B
THR
712
n
298
THR
712
B
LYS
713
n
299
LYS
713
B
GLN
714
n
300
GLN
714
B
ALA
715
n
301
ALA
715
B
GLY
716
n
302
GLY
716
B
LEU
717
n
303
LEU
717
B
VAL
718
n
304
VAL
718
B
VAL
719
n
305
VAL
719
B
LYS
720
n
306
LYS
720
B
LEU
721
n
307
LEU
721
B
LEU
722
n
308
LEU
722
B
MET
723
n
309
MET
723
B
LYS
724
n
310
LYS
724
B
LEU
725
n
311
LEU
725
B
ASN
726
n
312
ASN
726
B
GLY
727
n
313
GLY
727
B
GLN
728
n
314
GLN
728
B
LEU
729
n
315
LEU
729
B
n
316
730
B
n
317
731
B
n
318
732
B
n
319
733
B
n
320
734
B
n
321
735
B
n
322
736
B
5.4306
-0.8849
2.1125
7.7895
-7.4497
8.0722
0.1048
0.0470
0.5846
-0.4951
-0.5781
-0.3110
0.1034
0.5284
0.5160
0.3156
0.0782
0.0091
0.2513
0.0058
0.2789
refined
21.4713
19.4644
19.1400
X-RAY DIFFRACTION
1.6618
1.6268
0.8634
2.2232
1.3212
8.2493
-0.1648
-0.2974
-0.8874
-0.0440
-0.1047
-0.9391
0.5738
0.5408
0.1507
0.2952
0.0703
0.0502
0.3711
0.1584
0.5126
refined
31.2274
4.3413
22.8397
X-RAY DIFFRACTION
6.8348
-1.2420
6.5884
4.5186
-1.7543
8.1744
0.0036
-0.3357
0.4759
-0.4043
-0.3764
-0.0499
0.0903
-0.5814
0.3870
0.2662
0.0110
0.0268
0.3368
-0.0093
0.2394
refined
24.1499
16.0195
15.6803
X-RAY DIFFRACTION
7.5066
0.5170
-0.4605
2.7273
4.1977
6.7039
-0.6980
-1.8024
0.7624
1.5858
0.1174
-0.7659
0.1577
1.2442
0.5948
0.5245
-0.0095
-0.0645
0.9298
-0.0190
0.4159
refined
28.3750
18.8537
34.2624
X-RAY DIFFRACTION
2.8741
1.2610
-0.5999
8.0122
-1.1853
4.1790
0.1581
-0.7745
0.0393
0.8316
-0.2574
0.3121
-0.2160
-0.1980
0.0933
0.2577
-0.0558
0.0281
0.4215
-0.0156
0.2257
refined
17.3222
11.2427
33.1607
X-RAY DIFFRACTION
4.4706
0.6292
-1.1489
7.5032
-1.8842
4.3393
-0.1471
-0.0937
-0.4653
-0.0116
-0.1229
0.3882
0.4290
-0.2600
0.2393
0.2216
-0.0609
-0.0117
0.2894
-0.0225
0.2676
refined
14.9490
3.3238
25.2872
X-RAY DIFFRACTION
6.0642
2.3543
-1.0593
3.3479
0.9525
4.6346
0.1045
-0.4948
-0.1640
0.1782
-0.1231
-0.3007
0.2685
0.1711
-0.0035
0.2145
0.0340
-0.0189
0.2790
0.0456
0.2561
refined
47.4698
17.6906
21.2528
X-RAY DIFFRACTION
3.4339
0.8926
-0.7889
5.5759
2.6414
3.7465
0.0034
-0.3283
0.0143
-0.2106
0.0252
-0.0899
-0.2021
0.2182
-0.0260
0.2057
0.0499
-0.0040
0.2540
0.0455
0.1679
refined
49.3466
22.5926
11.9087
X-RAY DIFFRACTION
6.1954
-2.1623
1.1594
5.3293
-4.7930
7.7956
-0.3306
-0.0976
0.0102
0.5466
0.0684
0.0008
-0.3418
-0.1967
0.2321
0.2645
-0.0008
0.0359
0.1616
-0.0263
0.2171
refined
38.6435
15.1479
6.2285
X-RAY DIFFRACTION
6.9523
0.6030
0.5758
2.9120
0.4657
4.4122
-0.0446
0.8660
0.0752
-0.2854
-0.0079
0.4065
0.0047
-0.5829
0.0326
0.2776
-0.0085
-0.0096
0.4027
-0.0138
0.2412
refined
28.8920
15.2439
-4.7701
X-RAY DIFFRACTION
3.1225
0.9774
-0.9669
5.5045
-0.0197
3.4379
-0.0765
0.3497
0.3904
-0.2715
0.2336
0.3088
-0.2277
-0.0815
-0.1613
0.1970
-0.0234
0.0225
0.2501
0.0744
0.2663
refined
50.9923
26.7383
-2.6845
X-RAY DIFFRACTION
7.6101
1.5126
0.4376
6.6369
1.2970
7.4878
0.2631
-0.0232
0.5262
-0.5793
0.1475
-1.0708
-0.8578
1.1428
-0.3799
0.3321
-0.0761
0.1424
0.3810
0.0024
0.5076
refined
65.2890
27.3187
-1.7250
X-RAY DIFFRACTION
4.3896
0.1233
-0.5590
6.6298
-2.6556
4.6871
0.0193
0.3703
0.1213
-0.5849
-0.0468
-0.5801
-0.0032
0.4389
-0.0089
0.2433
-0.0206
0.0729
0.2849
0.0029
0.3140
refined
62.0141
24.5566
-0.6715
X-RAY DIFFRACTION
A
0
A
10
X-RAY DIFFRACTION
1
CHAIN A AND (RESSEQ 0:10)
A
11
A
36
X-RAY DIFFRACTION
2
CHAIN A AND (RESSEQ 11:36)
A
37
A
58
X-RAY DIFFRACTION
3
CHAIN A AND (RESSEQ 37:58)
A
59
A
74
X-RAY DIFFRACTION
4
CHAIN A AND (RESSEQ 59:74)
A
75
A
116
X-RAY DIFFRACTION
5
CHAIN A AND (RESSEQ 75:116)
A
117
A
167
X-RAY DIFFRACTION
6
CHAIN A AND (RESSEQ 117:167)
B
419
B
486
X-RAY DIFFRACTION
7
CHAIN B AND (RESSEQ 419:486)
B
487
B
524
X-RAY DIFFRACTION
8
CHAIN B AND (RESSEQ 487:524)
B
525
B
541
X-RAY DIFFRACTION
9
CHAIN B AND (RESSEQ 525:541)
B
542
B
629
X-RAY DIFFRACTION
10
CHAIN B AND (RESSEQ 542:629)
B
630
B
682
X-RAY DIFFRACTION
11
CHAIN B AND (RESSEQ 630:682)
B
683
B
701
X-RAY DIFFRACTION
12
CHAIN B AND (RESSEQ 683:701)
B
702
B
729
X-RAY DIFFRACTION
13
CHAIN B AND (RESSEQ 702:729)
author_defined_assembly
2
dimeric
A
SER
17
A
OG
SER
19
1_555
A
MG
202
D
MG
MG
1_555
A
THR
35
A
OG1
THR
37
1_555
74.1
A
SER
17
A
OG
SER
19
1_555
A
MG
202
D
MG
MG
1_555
A
GSP
201
C
O2B
GSP
1_555
86.7
A
THR
35
A
OG1
THR
37
1_555
A
MG
202
D
MG
MG
1_555
A
GSP
201
C
O2B
GSP
1_555
159.0
A
SER
17
A
OG
SER
19
1_555
A
MG
202
D
MG
MG
1_555
A
GSP
201
C
O3G
GSP
1_555
165.6
A
THR
35
A
OG1
THR
37
1_555
A
MG
202
D
MG
MG
1_555
A
GSP
201
C
O3G
GSP
1_555
91.6
A
GSP
201
C
O2B
GSP
1_555
A
MG
202
D
MG
MG
1_555
A
GSP
201
C
O3G
GSP
1_555
107.3
A
SER
17
A
OG
SER
19
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
381
E
O
HOH
1_555
85.1
A
THR
35
A
OG1
THR
37
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
381
E
O
HOH
1_555
86.0
A
GSP
201
C
O2B
GSP
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
381
E
O
HOH
1_555
101.2
A
GSP
201
C
O3G
GSP
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
381
E
O
HOH
1_555
94.9
A
SER
17
A
OG
SER
19
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
382
E
O
HOH
1_555
84.2
A
THR
35
A
OG1
THR
37
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
382
E
O
HOH
1_555
88.3
A
GSP
201
C
O2B
GSP
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
382
E
O
HOH
1_555
81.1
A
GSP
201
C
O3G
GSP
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
382
E
O
HOH
1_555
94.7
A
HOH
381
E
O
HOH
1_555
A
MG
202
D
MG
MG
1_555
A
HOH
382
E
O
HOH
1_555
169.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
144
A
O
LEU
146
A
N
GLY
115
A
N
GLY
117
A
O
ASN
116
A
O
ASN
118
A
N
TYR
82
A
N
TYR
84
A
O
ALA
79
A
O
ALA
81
A
N
LEU
9
A
N
LEU
11
A
N
LEU
6
A
N
LEU
8
A
O
GLU
54
A
O
GLU
56
A
O
CYS
51
A
O
CYS
53
A
N
VAL
44
A
N
VAL
46
A
N
SER
39
A
N
SER
41
B
O
TYR
431
B
O
TYR
17
B
O
VAL
434
B
O
VAL
20
B
N
VAL
422
B
N
VAL
8
B
N
TYR
425
B
N
TYR
11
B
O
LEU
506
B
O
LEU
92
B
O
GLN
505
B
O
GLN
91
B
N
CYS
466
B
N
CYS
52
B
N
ILE
465
B
N
ILE
51
B
O
LEU
472
B
O
LEU
58
B
N
ILE
644
B
N
ILE
230
B
O
ILE
656
B
O
ILE
242
B
N
GLY
661
B
N
GLY
247
B
O
HIS
668
B
O
HIS
254
B
N
LEU
669
B
N
LEU
255
B
O
LEU
678
B
O
LEU
264
B
N
GLN
689
B
N
GLN
275
B
O
GLN
698
B
O
GLN
284
B
N
ILE
699
B
N
ILE
285
B
O
PHE
708
B
O
PHE
294
1
A
GLY
-1
A
GLY
1
1
Y
1
B
GLY
415
B
GLY
1
1
Y
1
B
SER
416
B
SER
2
1
Y
1
B
PRO
417
B
PRO
3
1
Y
1
B
GLU
418
B
GLU
4
1
Y
1
B
SER
611
B
SER
197
1
Y
1
B
GLU
612
B
GLU
198
1
Y
1
B
LYS
647
B
LYS
233
1
Y
1
B
ALA
648
B
ALA
234
1
Y
1
B
SER
649
B
SER
235
1
Y
1
B
PRO
650
B
PRO
236
1
Y
1
B
SER
651
B
SER
237
1
Y
1
B
ASN
652
B
ASN
238
1
Y
1
B
HIS
653
B
HIS
239
1
Y
1
B
MET
730
B
MET
316
1
Y
1
B
PRO
731
B
PRO
317
1
Y
1
B
THR
732
B
THR
318
1
Y
1
B
GLU
733
B
GLU
319
1
Y
1
B
ARG
734
B
ARG
320
1
Y
1
B
ASN
735
B
ASN
321
1
Y
1
B
SER
736
B
SER
322
1
Y
1
A
A
O
O
HOH
HOH
331
332
1.95
1
A
A
O
O
HOH
HOH
351
400
1.96
1
B
B
NH2
O
ARG
HOH
426
863
1.97
1
A
A
O3G
O
GSP
HOH
201
374
2.00
1
A
A
O
O
HOH
HOH
385
393
2.00
1
A
A
O
O
HOH
HOH
368
394
2.02
1
B
B
O
O
MET
HOH
448
1007
2.12
1
B
B
O
O
HOH
HOH
918
924
2.13
1
B
B
O
O
HOH
HOH
827
916
2.14
1
A
A
O
O
ASP
HOH
108
333
2.14
1
B
B
O
O
HOH
HOH
900
932
2.14
1
A
A
OD2
O
ASP
HOH
47
328
2.14
1
B
B
O
O
HOH
HOH
964
966
2.15
1
B
B
O
O
HOH
HOH
905
927
2.15
1
A
A
O
O
HOH
HOH
373
407
2.16
1
B
B
NH1
O
ARG
HOH
623
910
2.19
1
A
GLU
37
-172.53
116.92
1
A
LYS
117
72.01
34.15
1
A
TRP
138
-86.28
49.20
1
B
PHE
575
-103.59
-62.62
1
B
SER
592
-83.55
-73.22
1
B
PRO
595
-67.14
4.60
1
B
ASP
692
-22.14
-74.07
1
B
ASP
694
-74.92
47.79
1
B
GLU
703
-85.52
-73.10
1
B
THR
712
-172.97
139.36
190.390
41.2223
18.130
-6.1315
-0.0000
7.6899
2.3246
-0.0000
3.8068
0.2388
0.1961
0.1983
1.9500
47.4250
1936
37384
37384
5.1800
96.8900
1.000
0.440
0.3400
RANDOM
1
THROUGHOUT
1.350
MOLECULAR REPLACEMENT
27.6100
0.9800
1.2000
PDB entry 1C1Y
ML
FLAT BULK SOLVENT MODEL
31.4500
0.2970
1.9500
47.4250
327
4178
33
0
3818
28.6
1.95
50
4DXA
37653
37653
0
0
0.083
1
15.4
3.3
97.2
1.95
2.02
2.56
3774
0.881
1
3.4
98.1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
CBASS
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
refinement
PHENIX
1.7.3_928
Co-crystal structure of Rap1 in complex with KRIT1
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
GLY
15
A
GLY
17
HELX_P
A
GLY
26
A
GLY
28
1
1
12
A
PHE
64
A
PHE
66
HELX_P
A
GLY
75
A
GLY
77
1
2
12
A
ALA
86
A
ALA
88
HELX_P
A
ASP
92
A
ASP
94
1
3
7
A
ASP
92
A
ASP
94
HELX_P
A
ASP
105
A
ASP
107
1
4
14
A
LEU
120
A
LEU
122
HELX_P
A
ARG
124
A
ARG
126
5
5
5
A
GLY
127
A
GLY
129
HELX_P
A
TRP
138
A
TRP
140
1
6
12
A
ASN
153
A
ASN
155
HELX_P
A
ARG
167
A
ARG
169
1
7
15
B
HIS
438
B
HIS
24
HELX_P
B
THR
442
B
THR
28
5
8
5
B
THR
443
B
THR
29
HELX_P
B
GLU
449
B
GLU
35
1
9
7
B
GLU
456
B
GLU
42
HELX_P
B
GLN
459
B
GLN
45
5
10
4
B
LYS
479
B
LYS
65
HELX_P
B
ASP
486
B
ASP
72
1
11
8
B
ASP
486
B
ASP
72
HELX_P
B
THR
495
B
THR
81
1
12
10
B
PRO
515
B
PRO
101
HELX_P
B
LYS
520
B
LYS
106
1
13
6
B
ASP
524
B
ASP
110
HELX_P
B
GLY
542
B
GLY
128
1
14
19
B
PRO
547
B
PRO
133
HELX_P
B
GLY
564
B
GLY
150
1
15
18
B
GLU
567
B
GLU
153
HELX_P
B
LYS
572
B
LYS
158
1
16
6
B
ASN
577
B
ASN
163
HELX_P
B
LYS
582
B
LYS
168
1
17
6
B
LYS
593
B
LYS
179
HELX_P
B
HIS
596
B
HIS
182
5
18
4
B
TRP
597
B
TRP
183
HELX_P
B
THR
610
B
THR
196
1
19
14
B
GLU
617
B
GLU
203
HELX_P
B
GLU
631
B
GLU
217
1
20
15
B
GLN
714
B
GLN
300
HELX_P
B
GLN
728
B
GLN
314
1
21
15
metalc
2.520
A
SER
17
A
OG
SER
19
1_555
A
MG
202
D
MG
MG
1_555
metalc
2.496
A
THR
35
A
OG1
THR
37
1_555
A
MG
202
D
MG
MG
1_555
metalc
2.374
A
GSP
201
C
O2B
GSP
1_555
A
MG
202
D
MG
MG
1_555
metalc
2.455
A
GSP
201
C
O3G
GSP
1_555
A
MG
202
D
MG
MG
1_555
metalc
2.491
A
MG
202
D
MG
MG
1_555
A
HOH
381
E
O
HOH
1_555
metalc
2.551
A
MG
202
D
MG
MG
1_555
A
HOH
382
E
O
HOH
1_555
PROTEIN BINDING
GTPase, FERM, Protein-protein interaction, GTP binding, Cytoplasmic, PROTEIN BINDING
RAP1B_HUMAN
UNP
1
1
P61224
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFAL
VYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYD
LVRQINR
KRIT1_HUMAN
UNP
2
420
O00522
EKVRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLSLQLKPYHKPLQHVRDWPEILAELTNLDP
QRETPQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEE
NLKSIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVY
VGVNIKGLHLLNMETKALLISLKYGCFMWQLGDTDTCFQIHSMENKMSFIVHTKQAGLVVKLLMKLNGQLMPTERNS
1
167
4DXA
1
167
P61224
A
1
3
169
420
736
4DXA
420
736
O00522
B
2
6
322
1
expression tag
GLY
-1
4DXA
A
P61224
UNP
1
1
expression tag
SER
0
4DXA
A
P61224
UNP
2
1
GLY
engineered mutation
VAL
12
4DXA
A
P61224
UNP
12
14
2
expression tag
GLY
415
4DXA
B
O00522
UNP
1
2
expression tag
SER
416
4DXA
B
O00522
UNP
2
2
expression tag
PRO
417
4DXA
B
O00522
UNP
3
2
expression tag
GLU
418
4DXA
B
O00522
UNP
4
2
expression tag
PHE
419
4DXA
B
O00522
UNP
5
11
4
3
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
142
A
ALA
144
A
GLU
145
A
GLU
147
A
MET
111
A
MET
113
A
ASN
116
A
ASN
118
A
GLY
77
A
GLY
79
A
SER
83
A
SER
85
A
ARG
2
A
ARG
4
A
GLY
10
A
GLY
12
A
GLN
49
A
GLN
51
A
THR
58
A
THR
60
A
GLU
37
A
GLU
39
A
VAL
46
A
VAL
48
B
TYR
431
B
TYR
17
B
GLU
435
B
GLU
21
B
LYS
421
B
LYS
7
B
TYR
425
B
TYR
11
B
GLN
505
B
GLN
91
B
ARG
510
B
ARG
96
B
PHE
461
B
PHE
47
B
CYS
466
B
CYS
52
B
SER
471
B
SER
57
B
GLN
473
B
GLN
59
B
ALA
638
B
ALA
224
B
ILE
644
B
ILE
230
B
ILE
656
B
ILE
242
B
VAL
662
B
VAL
248
B
GLY
666
B
GLY
252
B
ASN
671
B
ASN
257
B
LEU
677
B
LEU
263
B
LYS
682
B
LYS
268
B
PHE
686
B
PHE
272
B
LEU
690
B
LEU
276
B
CYS
696
B
CYS
282
B
SER
701
B
SER
287
B
SER
707
B
SER
293
B
HIS
711
B
HIS
297
BINDING SITE FOR RESIDUE GSP A 201
A
GSP
201
Software
26
BINDING SITE FOR RESIDUE MG A 202
A
MG
202
Software
5
A
VAL
12
A
VAL
14
26
1_555
A
GLY
13
A
GLY
15
26
1_555
A
VAL
14
A
VAL
16
26
1_555
A
GLY
15
A
GLY
17
26
1_555
A
LYS
16
A
LYS
18
26
1_555
A
SER
17
A
SER
19
26
1_555
A
ALA
18
A
ALA
20
26
1_555
A
PHE
28
A
PHE
30
26
1_555
A
VAL
29
A
VAL
31
26
1_555
A
GLU
30
A
GLU
32
26
1_555
A
TYR
32
A
TYR
34
26
1_555
A
THR
35
A
THR
37
26
1_555
A
GLY
60
A
GLY
62
26
1_555
A
ASN
116
A
ASN
118
26
1_555
A
LYS
117
A
LYS
119
26
1_555
A
ASP
119
A
ASP
121
26
1_555
A
LEU
120
A
LEU
122
26
1_555
A
SER
147
A
SER
149
26
1_555
A
ALA
148
A
ALA
150
26
1_555
A
LYS
149
A
LYS
151
26
1_555
A
MG
202
D
MG
26
1_555
A
HOH
316
E
HOH
26
1_555
A
HOH
354
E
HOH
26
1_555
A
HOH
374
E
HOH
26
1_555
A
HOH
382
E
HOH
26
1_555
A
HOH
386
E
HOH
26
1_555
A
SER
17
A
SER
19
5
1_555
A
THR
35
A
THR
37
5
1_555
A
GSP
201
C
GSP
5
1_555
A
HOH
381
E
HOH
5
1_555
A
HOH
382
E
HOH
5
1_555
4
P 1 21 1