0.016694
0.000000
0.000000
0.000000
0.016694
0.000000
0.000000
0.000000
0.007772
0.00000
0.00000
0.00000
Wei, J.
Huang, G.
Wang, Y.
Gong, W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
59.900
59.900
128.660
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
N
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
sing
Y
339
N
doub
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
To be Published
0353
Crystal Structure of endoribonuclease Cas6e from Escherichia coli
10.2210/pdb4dzd/pdb
pdb_00004dzd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-09-27
ADSC QUANTUM 315
Si 111 channel
SINGLE WAVELENGTH
M
x-ray
1
0.9792
1.0
BL17U
SSRF
0.9792
SYNCHROTRON
SSRF BEAMLINE BL17U
24357.225
Uncharacterized protein ygcH
1
man
polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
143
nat
water
Cas6e
no
no
MGSSHHHHHHSSGLVPRGSMYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPV
STAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHP
ISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
MGSSHHHHHHSSGLVPRGSMYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPV
STAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHP
ISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
K12
sample
ygcH
83333
Escherichia coli
562
Escherichia coli
BL21
plasmid
pET28a
1
2.37
48.08
VAPOR DIFFUSION, HANGING DROP
5.5
0.1M Bis-Tris, 0.2M ammonium acetate, 25% PEG3350, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
289
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-03-06
1
1
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2012-03-01
REL
REL
GOL
GLYCEROL
HOH
water
1WJ9
PDB
experimental model
GOL
1
2
GOL
GOL
201
A
HOH
1
3
HOH
HOH
301
A
HOH
2
3
HOH
HOH
302
A
HOH
3
3
HOH
HOH
303
A
HOH
4
3
HOH
HOH
304
A
HOH
5
3
HOH
HOH
305
A
HOH
6
3
HOH
HOH
306
A
HOH
7
3
HOH
HOH
307
A
HOH
8
3
HOH
HOH
308
A
HOH
9
3
HOH
HOH
309
A
HOH
10
3
HOH
HOH
310
A
HOH
11
3
HOH
HOH
311
A
HOH
12
3
HOH
HOH
312
A
HOH
13
3
HOH
HOH
313
A
HOH
14
3
HOH
HOH
314
A
HOH
15
3
HOH
HOH
315
A
HOH
16
3
HOH
HOH
316
A
HOH
17
3
HOH
HOH
317
A
HOH
18
3
HOH
HOH
318
A
HOH
19
3
HOH
HOH
319
A
HOH
20
3
HOH
HOH
320
A
HOH
21
3
HOH
HOH
321
A
HOH
22
3
HOH
HOH
322
A
HOH
23
3
HOH
HOH
323
A
HOH
24
3
HOH
HOH
324
A
HOH
25
3
HOH
HOH
325
A
HOH
26
3
HOH
HOH
326
A
HOH
27
3
HOH
HOH
327
A
HOH
28
3
HOH
HOH
328
A
HOH
29
3
HOH
HOH
329
A
HOH
30
3
HOH
HOH
330
A
HOH
31
3
HOH
HOH
331
A
HOH
32
3
HOH
HOH
332
A
HOH
33
3
HOH
HOH
333
A
HOH
34
3
HOH
HOH
334
A
HOH
35
3
HOH
HOH
335
A
HOH
36
3
HOH
HOH
336
A
HOH
37
3
HOH
HOH
337
A
HOH
38
3
HOH
HOH
338
A
HOH
39
3
HOH
HOH
339
A
HOH
40
3
HOH
HOH
340
A
HOH
41
3
HOH
HOH
341
A
HOH
42
3
HOH
HOH
342
A
HOH
43
3
HOH
HOH
343
A
HOH
44
3
HOH
HOH
344
A
HOH
45
3
HOH
HOH
345
A
HOH
46
3
HOH
HOH
346
A
HOH
47
3
HOH
HOH
347
A
HOH
48
3
HOH
HOH
348
A
HOH
49
3
HOH
HOH
349
A
HOH
50
3
HOH
HOH
350
A
HOH
51
3
HOH
HOH
351
A
HOH
52
3
HOH
HOH
352
A
HOH
53
3
HOH
HOH
353
A
HOH
54
3
HOH
HOH
354
A
HOH
55
3
HOH
HOH
355
A
HOH
56
3
HOH
HOH
356
A
HOH
57
3
HOH
HOH
357
A
HOH
58
3
HOH
HOH
358
A
HOH
59
3
HOH
HOH
359
A
HOH
60
3
HOH
HOH
360
A
HOH
61
3
HOH
HOH
361
A
HOH
62
3
HOH
HOH
362
A
HOH
63
3
HOH
HOH
363
A
HOH
64
3
HOH
HOH
364
A
HOH
65
3
HOH
HOH
365
A
HOH
66
3
HOH
HOH
366
A
HOH
67
3
HOH
HOH
367
A
HOH
68
3
HOH
HOH
368
A
HOH
69
3
HOH
HOH
369
A
HOH
70
3
HOH
HOH
370
A
HOH
71
3
HOH
HOH
371
A
HOH
72
3
HOH
HOH
372
A
HOH
73
3
HOH
HOH
373
A
HOH
74
3
HOH
HOH
374
A
HOH
75
3
HOH
HOH
375
A
HOH
76
3
HOH
HOH
376
A
HOH
77
3
HOH
HOH
377
A
HOH
78
3
HOH
HOH
378
A
HOH
79
3
HOH
HOH
379
A
HOH
80
3
HOH
HOH
380
A
HOH
81
3
HOH
HOH
381
A
HOH
82
3
HOH
HOH
382
A
HOH
83
3
HOH
HOH
383
A
HOH
84
3
HOH
HOH
384
A
HOH
85
3
HOH
HOH
385
A
HOH
86
3
HOH
HOH
386
A
HOH
87
3
HOH
HOH
387
A
HOH
88
3
HOH
HOH
388
A
HOH
89
3
HOH
HOH
389
A
HOH
90
3
HOH
HOH
390
A
HOH
91
3
HOH
HOH
391
A
HOH
92
3
HOH
HOH
392
A
HOH
93
3
HOH
HOH
393
A
HOH
94
3
HOH
HOH
394
A
HOH
95
3
HOH
HOH
395
A
HOH
96
3
HOH
HOH
396
A
HOH
97
3
HOH
HOH
397
A
HOH
98
3
HOH
HOH
398
A
HOH
99
3
HOH
HOH
399
A
HOH
100
3
HOH
HOH
400
A
HOH
101
3
HOH
HOH
401
A
HOH
102
3
HOH
HOH
402
A
HOH
103
3
HOH
HOH
403
A
HOH
104
3
HOH
HOH
404
A
HOH
105
3
HOH
HOH
405
A
HOH
106
3
HOH
HOH
406
A
HOH
107
3
HOH
HOH
407
A
HOH
108
3
HOH
HOH
408
A
HOH
109
3
HOH
HOH
409
A
HOH
110
3
HOH
HOH
410
A
HOH
111
3
HOH
HOH
411
A
HOH
112
3
HOH
HOH
412
A
HOH
113
3
HOH
HOH
413
A
HOH
114
3
HOH
HOH
414
A
HOH
115
3
HOH
HOH
415
A
HOH
116
3
HOH
HOH
416
A
HOH
117
3
HOH
HOH
417
A
HOH
118
3
HOH
HOH
418
A
HOH
119
3
HOH
HOH
419
A
HOH
120
3
HOH
HOH
420
A
HOH
121
3
HOH
HOH
421
A
HOH
122
3
HOH
HOH
422
A
HOH
123
3
HOH
HOH
423
A
HOH
124
3
HOH
HOH
424
A
HOH
125
3
HOH
HOH
425
A
HOH
126
3
HOH
HOH
426
A
HOH
127
3
HOH
HOH
427
A
HOH
128
3
HOH
HOH
428
A
HOH
129
3
HOH
HOH
429
A
HOH
130
3
HOH
HOH
430
A
HOH
131
3
HOH
HOH
431
A
HOH
132
3
HOH
HOH
432
A
HOH
133
3
HOH
HOH
433
A
HOH
134
3
HOH
HOH
434
A
HOH
135
3
HOH
HOH
435
A
HOH
136
3
HOH
HOH
436
A
HOH
137
3
HOH
HOH
437
A
HOH
138
3
HOH
HOH
438
A
HOH
139
3
HOH
HOH
439
A
HOH
140
3
HOH
HOH
440
A
HOH
141
3
HOH
HOH
441
A
HOH
142
3
HOH
HOH
442
A
HOH
143
3
HOH
HOH
443
A
n
1
-18
A
n
2
-17
A
n
3
-16
A
n
4
-15
A
n
5
-14
A
n
6
-13
A
n
7
-12
A
n
8
-11
A
n
9
-10
A
n
10
-9
A
n
11
-8
A
n
12
-7
A
n
13
-6
A
n
14
-5
A
n
15
-4
A
n
16
-3
A
n
17
-2
A
n
18
-1
A
n
19
0
A
MET
1
n
20
MET
1
A
TYR
2
n
21
TYR
2
A
LEU
3
n
22
LEU
3
A
SER
4
n
23
SER
4
A
LYS
5
n
24
LYS
5
A
VAL
6
n
25
VAL
6
A
ILE
7
n
26
ILE
7
A
ILE
8
n
27
ILE
8
A
ALA
9
n
28
ALA
9
A
ARG
10
n
29
ARG
10
A
ALA
11
n
30
ALA
11
A
TRP
12
n
31
TRP
12
A
SER
13
n
32
SER
13
A
ARG
14
n
33
ARG
14
A
ASP
15
n
34
ASP
15
A
LEU
16
n
35
LEU
16
A
TYR
17
n
36
TYR
17
A
GLN
18
n
37
GLN
18
A
LEU
19
n
38
LEU
19
A
HIS
20
n
39
HIS
20
A
GLN
21
n
40
GLN
21
A
GLY
22
n
41
GLY
22
A
LEU
23
n
42
LEU
23
A
TRP
24
n
43
TRP
24
A
HIS
25
n
44
HIS
25
A
LEU
26
n
45
LEU
26
A
PHE
27
n
46
PHE
27
A
PRO
28
n
47
PRO
28
A
ASN
29
n
48
ASN
29
A
n
49
30
A
n
50
31
A
n
51
32
A
n
52
33
A
n
53
34
A
n
54
35
A
ASP
36
n
55
ASP
36
A
PHE
37
n
56
PHE
37
A
LEU
38
n
57
LEU
38
A
PHE
39
n
58
PHE
39
A
HIS
40
n
59
HIS
40
A
VAL
41
n
60
VAL
41
A
GLU
42
n
61
GLU
42
A
LYS
43
n
62
LYS
43
A
ARG
44
n
63
ARG
44
A
ASN
45
n
64
ASN
45
A
THR
46
n
65
THR
46
A
PRO
47
n
66
PRO
47
A
GLU
48
n
67
GLU
48
A
GLY
49
n
68
GLY
49
A
CYS
50
n
69
CYS
50
A
HIS
51
n
70
HIS
51
A
VAL
52
n
71
VAL
52
A
LEU
53
n
72
LEU
53
A
LEU
54
n
73
LEU
54
A
GLN
55
n
74
GLN
55
A
SER
56
n
75
SER
56
A
ALA
57
n
76
ALA
57
A
GLN
58
n
77
GLN
58
A
MET
59
n
78
MET
59
A
PRO
60
n
79
PRO
60
A
VAL
61
n
80
VAL
61
A
SER
62
n
81
SER
62
A
THR
63
n
82
THR
63
A
ALA
64
n
83
ALA
64
A
VAL
65
n
84
VAL
65
A
ALA
66
n
85
ALA
66
A
THR
67
n
86
THR
67
A
VAL
68
n
87
VAL
68
A
ILE
69
n
88
ILE
69
A
LYS
70
n
89
LYS
70
A
THR
71
n
90
THR
71
A
LYS
72
n
91
LYS
72
A
GLN
73
n
92
GLN
73
A
VAL
74
n
93
VAL
74
A
GLU
75
n
94
GLU
75
A
PHE
76
n
95
PHE
76
A
GLN
77
n
96
GLN
77
A
LEU
78
n
97
LEU
78
A
GLN
79
n
98
GLN
79
A
VAL
80
n
99
VAL
80
A
GLY
81
n
100
GLY
81
A
VAL
82
n
101
VAL
82
A
PRO
83
n
102
PRO
83
A
LEU
84
n
103
LEU
84
A
TYR
85
n
104
TYR
85
A
PHE
86
n
105
PHE
86
A
ARG
87
n
106
ARG
87
A
LEU
88
n
107
LEU
88
A
ARG
89
n
108
ARG
89
A
ALA
90
n
109
ALA
90
A
ASN
91
n
110
ASN
91
A
PRO
92
n
111
PRO
92
A
ILE
93
n
112
ILE
93
A
LYS
94
n
113
LYS
94
A
THR
95
n
114
THR
95
A
ILE
96
n
115
ILE
96
A
LEU
97
n
116
LEU
97
A
ASP
98
n
117
ASP
98
A
ASN
99
n
118
ASN
99
A
GLN
100
n
119
GLN
100
A
LYS
101
n
120
LYS
101
A
ARG
102
n
121
ARG
102
A
LEU
103
n
122
LEU
103
A
ASP
104
n
123
ASP
104
A
SER
105
n
124
SER
105
A
LYS
106
n
125
LYS
106
A
GLY
107
n
126
GLY
107
A
ASN
108
n
127
ASN
108
A
ILE
109
n
128
ILE
109
A
LYS
110
n
129
LYS
110
A
ARG
111
n
130
ARG
111
A
CYS
112
n
131
CYS
112
A
ARG
113
n
132
ARG
113
A
VAL
114
n
133
VAL
114
A
PRO
115
n
134
PRO
115
A
LEU
116
n
135
LEU
116
A
ILE
117
n
136
ILE
117
A
LYS
118
n
137
LYS
118
A
GLU
119
n
138
GLU
119
A
ALA
120
n
139
ALA
120
A
GLU
121
n
140
GLU
121
A
GLN
122
n
141
GLN
122
A
ILE
123
n
142
ILE
123
A
ALA
124
n
143
ALA
124
A
TRP
125
n
144
TRP
125
A
LEU
126
n
145
LEU
126
A
GLN
127
n
146
GLN
127
A
ARG
128
n
147
ARG
128
A
LYS
129
n
148
LYS
129
A
LEU
130
n
149
LEU
130
A
GLY
131
n
150
GLY
131
A
ASN
132
n
151
ASN
132
A
ALA
133
n
152
ALA
133
A
ALA
134
n
153
ALA
134
A
ARG
135
n
154
ARG
135
A
VAL
136
n
155
VAL
136
A
GLU
137
n
156
GLU
137
A
ASP
138
n
157
ASP
138
A
VAL
139
n
158
VAL
139
A
HIS
140
n
159
HIS
140
A
PRO
141
n
160
PRO
141
A
ILE
142
n
161
ILE
142
A
SER
143
n
162
SER
143
A
GLU
144
n
163
GLU
144
A
ARG
145
n
164
ARG
145
A
PRO
146
n
165
PRO
146
A
GLN
147
n
166
GLN
147
A
TYR
148
n
167
TYR
148
A
PHE
149
n
168
PHE
149
A
SER
150
n
169
SER
150
A
GLY
151
n
170
GLY
151
A
ASP
152
n
171
ASP
152
A
GLY
153
n
172
GLY
153
A
LYS
154
n
173
LYS
154
A
SER
155
n
174
SER
155
A
GLY
156
n
175
GLY
156
A
LYS
157
n
176
LYS
157
A
ILE
158
n
177
ILE
158
A
GLN
159
n
178
GLN
159
A
THR
160
n
179
THR
160
A
VAL
161
n
180
VAL
161
A
CYS
162
n
181
CYS
162
A
PHE
163
n
182
PHE
163
A
GLU
164
n
183
GLU
164
A
GLY
165
n
184
GLY
165
A
VAL
166
n
185
VAL
166
A
LEU
167
n
186
LEU
167
A
THR
168
n
187
THR
168
A
ILE
169
n
188
ILE
169
A
ASN
170
n
189
ASN
170
A
ASP
171
n
190
ASP
171
A
ALA
172
n
191
ALA
172
A
PRO
173
n
192
PRO
173
A
ALA
174
n
193
ALA
174
A
LEU
175
n
194
LEU
175
A
ILE
176
n
195
ILE
176
A
ASP
177
n
196
ASP
177
A
LEU
178
n
197
LEU
178
A
VAL
179
n
198
VAL
179
A
GLN
180
n
199
GLN
180
A
GLN
181
n
200
GLN
181
A
GLY
182
n
201
GLY
182
A
ILE
183
n
202
ILE
183
A
GLY
184
n
203
GLY
184
A
PRO
185
n
204
PRO
185
A
ALA
186
n
205
ALA
186
A
LYS
187
n
206
LYS
187
A
SER
188
n
207
SER
188
A
MET
189
n
208
MET
189
A
GLY
190
n
209
GLY
190
A
CYS
191
n
210
CYS
191
A
GLY
192
n
211
GLY
192
A
LEU
193
n
212
LEU
193
A
LEU
194
n
213
LEU
194
A
SER
195
n
214
SER
195
A
LEU
196
n
215
LEU
196
A
ALA
197
n
216
ALA
197
A
PRO
198
n
217
PRO
198
A
LEU
199
n
218
LEU
199
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
38
A
N
LEU
57
A
O
GLN
55
A
O
GLN
74
A
O
VAL
52
A
O
VAL
71
A
N
VAL
6
A
N
VAL
25
A
N
LEU
3
A
N
LEU
22
A
O
LYS
72
A
O
LYS
91
A
N
ILE
142
A
N
ILE
161
A
O
CYS
162
A
O
CYS
181
A
O
PHE
163
A
O
PHE
182
A
N
LEU
88
A
N
LEU
107
A
N
TYR
85
A
N
TYR
104
A
O
ALA
197
A
O
ALA
216
A
N
ILE
96
A
N
ILE
115
A
O
CYS
112
A
O
CYS
131
A
N
GLN
147
A
N
GLN
166
A
O
ILE
158
A
O
ILE
177
1
A
MET
-18
A
MET
1
1
Y
1
A
GLY
-17
A
GLY
2
1
Y
1
A
SER
-16
A
SER
3
1
Y
1
A
SER
-15
A
SER
4
1
Y
1
A
HIS
-14
A
HIS
5
1
Y
1
A
HIS
-13
A
HIS
6
1
Y
1
A
HIS
-12
A
HIS
7
1
Y
1
A
HIS
-11
A
HIS
8
1
Y
1
A
HIS
-10
A
HIS
9
1
Y
1
A
HIS
-9
A
HIS
10
1
Y
1
A
SER
-8
A
SER
11
1
Y
1
A
SER
-7
A
SER
12
1
Y
1
A
GLY
-6
A
GLY
13
1
Y
1
A
LEU
-5
A
LEU
14
1
Y
1
A
VAL
-4
A
VAL
15
1
Y
1
A
PRO
-3
A
PRO
16
1
Y
1
A
ARG
-2
A
ARG
17
1
Y
1
A
GLY
-1
A
GLY
18
1
Y
1
A
SER
0
A
SER
19
1
Y
1
A
ARG
30
A
ARG
49
1
Y
1
A
PRO
31
A
PRO
50
1
Y
1
A
ASP
32
A
ASP
51
1
Y
1
A
ALA
33
A
ALA
52
1
Y
1
A
ALA
34
A
ALA
53
1
Y
1
A
ARG
35
A
ARG
54
1
Y
77.410
29.5102
10.910
2.7229
0.0000
-0.0000
2.7229
-0.0000
-5.4457
0.2461
0.2019
0.2042
1.9990
35.3760
827
15697
16524
5.0000
99.7800
1.000
0.440
0.8359
0.4300
1
0.000
MOLECULAR REPLACEMENT
22.4600
0.9000
1.1100
1WJ9
ML
FLAT BULK SOLVENT MODEL
41.4700
0.3640
1.9990
35.3760
143
1672
6
0
1523
0.006
1594
0.986
2161
0.069
243
0.004
279
15.371
610
0.2601
0.2096
2.1241
152
2501
2653
6
99.0000
0.2139
0.1975
2.2881
119
2578
2697
6
100.0000
0.2584
0.1956
2.5183
126
2591
2717
6
100.0000
0.2319
0.2045
2.8825
128
2604
2732
6
100.0000
0.2674
0.1999
3.6311
132
2649
2781
6
100.0000
0.2390
0.2036
35.3818
170
2774
2944
6
100.0000
24.120
1.9990
50
4DZD
16585
16585
21.5
0.10
1
99.9
0.371
2.00
2.03
7.2
1
8.2
99.5
0.338
2.03
2.07
6.6
1
8.9
100.0
0.306
2.07
2.11
6.3
1
9.4
100.0
0.278
2.11
2.15
6.1
1
9.6
100.0
0.256
2.15
2.20
5.9
1
9.7
100.0
0.211
2.20
2.25
5.8
1
9.6
100.0
0.191
2.25
2.31
5.6
1
9.6
100.0
0.173
2.31
2.37
5.3
1
9.7
100.0
0.153
2.37
2.44
5.1
1
9.7
100.0
0.142
2.44
2.52
5.0
1
9.5
100.0
0.129
2.52
2.61
4.9
1
9.6
100.0
0.118
2.61
2.71
4.8
1
9.6
100.0
0.103
2.71
2.84
4.9
1
9.6
100.0
0.100
2.84
2.99
5.0
1
9.6
100.0
0.098
2.99
3.17
5.6
1
9.5
100.0
0.103
3.17
3.42
6.4
1
9.5
100.0
0.101
3.42
3.76
7.0
1
9.4
100.0
0.075
3.76
4.31
8.5
1
9.3
100.0
0.061
4.31
5.43
8.2
1
9.1
100.0
0.057
5.43
50
6.1
1
8.3
98.8
data collection
ADSC
Quantum
refinement
CNS
refinement
PHENIX
(phenix.refine: 1.7.1_743)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
CNS
Crystal structure of the CRISPR-associated protein Cas6e from Escherichia coli str. K-12
1
N
N
2
N
N
3
N
N
A
ARG
10
A
ARG
29
HELX_P
A
SER
13
A
SER
32
5
1
4
A
ASP
15
A
ASP
34
HELX_P
A
HIS
25
A
HIS
44
1
2
11
A
LYS
118
A
LYS
137
HELX_P
A
GLY
131
A
GLY
150
1
3
14
A
ASP
171
A
ASP
190
HELX_P
A
GLY
182
A
GLY
201
1
4
12
A
ALA
186
A
ALA
205
HELX_P
A
GLY
190
A
GLY
209
5
5
5
HYDROLASE
ferredoxin-like domain, endoribonuclease, crRNA, HYDROLASE
YGCH_ECOLI
UNP
1
1
Q46897
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQV
GVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQT
VCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
1
199
4DZD
1
199
Q46897
A
1
20
218
1
expression tag
MET
-18
4DZD
A
Q46897
UNP
1
1
expression tag
GLY
-17
4DZD
A
Q46897
UNP
2
1
expression tag
SER
-16
4DZD
A
Q46897
UNP
3
1
expression tag
SER
-15
4DZD
A
Q46897
UNP
4
1
expression tag
HIS
-14
4DZD
A
Q46897
UNP
5
1
expression tag
HIS
-13
4DZD
A
Q46897
UNP
6
1
expression tag
HIS
-12
4DZD
A
Q46897
UNP
7
1
expression tag
HIS
-11
4DZD
A
Q46897
UNP
8
1
expression tag
HIS
-10
4DZD
A
Q46897
UNP
9
1
expression tag
HIS
-9
4DZD
A
Q46897
UNP
10
1
expression tag
SER
-8
4DZD
A
Q46897
UNP
11
1
expression tag
SER
-7
4DZD
A
Q46897
UNP
12
1
expression tag
GLY
-6
4DZD
A
Q46897
UNP
13
1
expression tag
LEU
-5
4DZD
A
Q46897
UNP
14
1
expression tag
VAL
-4
4DZD
A
Q46897
UNP
15
1
expression tag
PRO
-3
4DZD
A
Q46897
UNP
16
1
expression tag
ARG
-2
4DZD
A
Q46897
UNP
17
1
expression tag
GLY
-1
4DZD
A
Q46897
UNP
18
1
expression tag
SER
0
4DZD
A
Q46897
UNP
19
4
4
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
37
A
PHE
56
A
THR
46
A
THR
65
A
GLY
49
A
GLY
68
A
SER
56
A
SER
75
A
TYR
2
A
TYR
21
A
ILE
8
A
ILE
27
A
ALA
66
A
ALA
85
A
GLN
73
A
GLN
92
A
ALA
134
A
ALA
153
A
SER
143
A
SER
162
A
VAL
161
A
VAL
180
A
ILE
169
A
ILE
188
A
PRO
83
A
PRO
102
A
ALA
90
A
ALA
109
A
LEU
194
A
LEU
213
A
PRO
198
A
PRO
217
A
ILE
93
A
ILE
112
A
LEU
97
A
LEU
116
A
ARG
111
A
ARG
130
A
PRO
115
A
PRO
134
A
GLN
147
A
GLN
166
A
TYR
148
A
TYR
167
A
LYS
157
A
LYS
176
A
ILE
158
A
ILE
177
BINDING SITE FOR RESIDUE GOL A 201
A
GOL
201
Software
3
A
ASP
36
A
ASP
55
3
1_555
A
PHE
37
A
PHE
56
3
1_555
A
LEU
38
A
LEU
57
3
1_555
92
P 41 21 2