0.007744
0.000000
0.000000
0.000000
0.007744
0.000000
0.000000
0.000000
0.012968
0.00000
0.00000
0.00000
Durand, E.
Audoly, G.
Derrez, E.
Spinelli, S.
Ortiz-Lombardia, M.
Cascales, E.
Raoult, D.
Cambillau, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
129.130
129.130
77.110
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
MN
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
O
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
S
N
348
N
O
N
349
N
O
N
350
N
O
N
351
N
O
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
R
C
N
357
N
O
N
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
N
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
N
407
N
O
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
N
N
421
S
C
N
422
N
C
N
423
N
O
N
424
N
C
N
425
N
C
N
426
N
C
N
427
N
O
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
sing
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
US
J.Biol.Chem.
JBCHA3
0071
1083-351X
Structure and functional characterization of the Vibrio cholerae toxin
from the VgrG/MARTX family.
2012
10.2210/pdb4e1f/pdb
pdb_00004e1f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
IMAGE PLATE
2012-02-23
MAR scanner 345 mm plate
mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
BRUKER AXS MICROSTAR
43741.230
VgrG protein
Vibrio cholerae VgrG1 ACD (unp residues 716-1111)
E16Q
1
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
54.938
MANGANESE (II) ION
1
syn
non-polymer
96.063
SULFATE ION
7
syn
non-polymer
18.015
water
472
nat
water
no
no
NAQPNLGRSTKATPDFPTHFPKSSIGIQNELAGLVVAMPANSAQKFGYVKSAQGDALFMLTKDMNQGSYQRPPSLQDGKN
YQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAE
SQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAE
LAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQ
YFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTESTTKSEVKLLDQFDPMKRKTVIQQVESLV
NAQPNLGRSTKATPDFPTHFPKSSIGIQNELAGLVVAMPANSAQKFGYVKSAQGDALFMLTKDMNQGSYQRPPSLQDGKN
YQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAE
SQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAE
LAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQ
YFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTESTTKSEVKLLDQFDPMKRKTVIQQVESLV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
O395
sample
VC_1416, VgrG1
666
Vibrio cholerae
511693
Escherichia coli
BL21
pETG20A
1
3.68
66.57
VAPOR DIFFUSION, SITTING DROP
6.3
300 nL of protein at 13mg/mL, 100 nL of 2.4 M AmSO4, 0.1 M Bi-Tris, pH 6.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-10-10
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-03-06
REL
REL
ADP
ADENOSINE-5'-DIPHOSPHATE
MN
MANGANESE (II) ION
SO4
SULFATE ION
HOH
water
4E1D
PDB
experimental model
ADP
1
2
ADP
ADP
401
A
MN
2
3
MN
MN
402
A
SO4
1
4
SO4
SO4
403
A
SO4
2
4
SO4
SO4
404
A
SO4
3
4
SO4
SO4
405
A
SO4
4
4
SO4
SO4
406
A
SO4
5
4
SO4
SO4
407
A
SO4
6
4
SO4
SO4
408
A
SO4
7
4
SO4
SO4
409
A
HOH
1
5
HOH
HOH
501
A
HOH
2
5
HOH
HOH
502
A
HOH
3
5
HOH
HOH
503
A
HOH
4
5
HOH
HOH
504
A
HOH
5
5
HOH
HOH
505
A
HOH
7
5
HOH
HOH
506
A
HOH
8
5
HOH
HOH
507
A
HOH
9
5
HOH
HOH
508
A
HOH
10
5
HOH
HOH
509
A
HOH
11
5
HOH
HOH
510
A
HOH
12
5
HOH
HOH
511
A
HOH
13
5
HOH
HOH
512
A
HOH
14
5
HOH
HOH
513
A
HOH
15
5
HOH
HOH
514
A
HOH
17
5
HOH
HOH
515
A
HOH
18
5
HOH
HOH
516
A
HOH
19
5
HOH
HOH
517
A
HOH
20
5
HOH
HOH
518
A
HOH
21
5
HOH
HOH
519
A
HOH
22
5
HOH
HOH
520
A
HOH
23
5
HOH
HOH
521
A
HOH
24
5
HOH
HOH
522
A
HOH
25
5
HOH
HOH
523
A
HOH
26
5
HOH
HOH
524
A
HOH
27
5
HOH
HOH
525
A
HOH
28
5
HOH
HOH
526
A
HOH
29
5
HOH
HOH
527
A
HOH
30
5
HOH
HOH
528
A
HOH
31
5
HOH
HOH
529
A
HOH
32
5
HOH
HOH
530
A
HOH
34
5
HOH
HOH
531
A
HOH
35
5
HOH
HOH
532
A
HOH
36
5
HOH
HOH
533
A
HOH
37
5
HOH
HOH
534
A
HOH
38
5
HOH
HOH
535
A
HOH
39
5
HOH
HOH
536
A
HOH
40
5
HOH
HOH
537
A
HOH
41
5
HOH
HOH
538
A
HOH
42
5
HOH
HOH
539
A
HOH
43
5
HOH
HOH
540
A
HOH
44
5
HOH
HOH
541
A
HOH
45
5
HOH
HOH
542
A
HOH
46
5
HOH
HOH
543
A
HOH
47
5
HOH
HOH
544
A
HOH
48
5
HOH
HOH
545
A
HOH
49
5
HOH
HOH
546
A
HOH
50
5
HOH
HOH
547
A
HOH
51
5
HOH
HOH
548
A
HOH
52
5
HOH
HOH
549
A
HOH
53
5
HOH
HOH
550
A
HOH
54
5
HOH
HOH
551
A
HOH
55
5
HOH
HOH
552
A
HOH
56
5
HOH
HOH
553
A
HOH
57
5
HOH
HOH
554
A
HOH
58
5
HOH
HOH
555
A
HOH
59
5
HOH
HOH
556
A
HOH
60
5
HOH
HOH
557
A
HOH
61
5
HOH
HOH
558
A
HOH
62
5
HOH
HOH
559
A
HOH
63
5
HOH
HOH
560
A
HOH
64
5
HOH
HOH
561
A
HOH
65
5
HOH
HOH
562
A
HOH
66
5
HOH
HOH
563
A
HOH
67
5
HOH
HOH
564
A
HOH
68
5
HOH
HOH
565
A
HOH
69
5
HOH
HOH
566
A
HOH
70
5
HOH
HOH
567
A
HOH
71
5
HOH
HOH
568
A
HOH
72
5
HOH
HOH
569
A
HOH
73
5
HOH
HOH
570
A
HOH
74
5
HOH
HOH
571
A
HOH
75
5
HOH
HOH
572
A
HOH
76
5
HOH
HOH
573
A
HOH
77
5
HOH
HOH
574
A
HOH
78
5
HOH
HOH
575
A
HOH
79
5
HOH
HOH
576
A
HOH
80
5
HOH
HOH
577
A
HOH
81
5
HOH
HOH
578
A
HOH
82
5
HOH
HOH
579
A
HOH
83
5
HOH
HOH
580
A
HOH
84
5
HOH
HOH
581
A
HOH
85
5
HOH
HOH
582
A
HOH
86
5
HOH
HOH
583
A
HOH
87
5
HOH
HOH
584
A
HOH
88
5
HOH
HOH
585
A
HOH
89
5
HOH
HOH
586
A
HOH
90
5
HOH
HOH
587
A
HOH
91
5
HOH
HOH
588
A
HOH
92
5
HOH
HOH
589
A
HOH
93
5
HOH
HOH
590
A
HOH
94
5
HOH
HOH
591
A
HOH
95
5
HOH
HOH
592
A
HOH
96
5
HOH
HOH
593
A
HOH
97
5
HOH
HOH
594
A
HOH
98
5
HOH
HOH
595
A
HOH
99
5
HOH
HOH
596
A
HOH
100
5
HOH
HOH
597
A
HOH
101
5
HOH
HOH
598
A
HOH
102
5
HOH
HOH
599
A
HOH
103
5
HOH
HOH
600
A
HOH
104
5
HOH
HOH
601
A
HOH
105
5
HOH
HOH
602
A
HOH
106
5
HOH
HOH
603
A
HOH
107
5
HOH
HOH
604
A
HOH
108
5
HOH
HOH
605
A
HOH
109
5
HOH
HOH
606
A
HOH
110
5
HOH
HOH
607
A
HOH
111
5
HOH
HOH
608
A
HOH
112
5
HOH
HOH
609
A
HOH
113
5
HOH
HOH
610
A
HOH
114
5
HOH
HOH
611
A
HOH
115
5
HOH
HOH
612
A
HOH
116
5
HOH
HOH
613
A
HOH
117
5
HOH
HOH
614
A
HOH
118
5
HOH
HOH
615
A
HOH
119
5
HOH
HOH
616
A
HOH
120
5
HOH
HOH
617
A
HOH
121
5
HOH
HOH
618
A
HOH
122
5
HOH
HOH
619
A
HOH
123
5
HOH
HOH
620
A
HOH
124
5
HOH
HOH
621
A
HOH
125
5
HOH
HOH
622
A
HOH
126
5
HOH
HOH
623
A
HOH
127
5
HOH
HOH
624
A
HOH
128
5
HOH
HOH
625
A
HOH
129
5
HOH
HOH
626
A
HOH
130
5
HOH
HOH
627
A
HOH
131
5
HOH
HOH
628
A
HOH
132
5
HOH
HOH
629
A
HOH
133
5
HOH
HOH
630
A
HOH
134
5
HOH
HOH
631
A
HOH
135
5
HOH
HOH
632
A
HOH
136
5
HOH
HOH
633
A
HOH
137
5
HOH
HOH
634
A
HOH
138
5
HOH
HOH
635
A
HOH
139
5
HOH
HOH
636
A
HOH
140
5
HOH
HOH
637
A
HOH
141
5
HOH
HOH
638
A
HOH
142
5
HOH
HOH
639
A
HOH
143
5
HOH
HOH
640
A
HOH
144
5
HOH
HOH
641
A
HOH
145
5
HOH
HOH
642
A
HOH
146
5
HOH
HOH
643
A
HOH
147
5
HOH
HOH
644
A
HOH
148
5
HOH
HOH
645
A
HOH
149
5
HOH
HOH
646
A
HOH
150
5
HOH
HOH
647
A
HOH
151
5
HOH
HOH
648
A
HOH
152
5
HOH
HOH
649
A
HOH
153
5
HOH
HOH
650
A
HOH
154
5
HOH
HOH
651
A
HOH
155
5
HOH
HOH
652
A
HOH
156
5
HOH
HOH
653
A
HOH
157
5
HOH
HOH
654
A
HOH
158
5
HOH
HOH
655
A
HOH
159
5
HOH
HOH
656
A
HOH
160
5
HOH
HOH
657
A
HOH
161
5
HOH
HOH
658
A
HOH
162
5
HOH
HOH
659
A
HOH
163
5
HOH
HOH
660
A
HOH
164
5
HOH
HOH
661
A
HOH
165
5
HOH
HOH
662
A
HOH
166
5
HOH
HOH
663
A
HOH
167
5
HOH
HOH
664
A
HOH
168
5
HOH
HOH
665
A
HOH
169
5
HOH
HOH
666
A
HOH
170
5
HOH
HOH
667
A
HOH
171
5
HOH
HOH
668
A
HOH
172
5
HOH
HOH
669
A
HOH
173
5
HOH
HOH
670
A
HOH
174
5
HOH
HOH
671
A
HOH
175
5
HOH
HOH
672
A
HOH
176
5
HOH
HOH
673
A
HOH
177
5
HOH
HOH
674
A
HOH
178
5
HOH
HOH
675
A
HOH
179
5
HOH
HOH
676
A
HOH
180
5
HOH
HOH
677
A
HOH
181
5
HOH
HOH
678
A
HOH
182
5
HOH
HOH
679
A
HOH
183
5
HOH
HOH
680
A
HOH
184
5
HOH
HOH
681
A
HOH
185
5
HOH
HOH
682
A
HOH
186
5
HOH
HOH
683
A
HOH
187
5
HOH
HOH
684
A
HOH
188
5
HOH
HOH
685
A
HOH
189
5
HOH
HOH
686
A
HOH
190
5
HOH
HOH
687
A
HOH
191
5
HOH
HOH
688
A
HOH
192
5
HOH
HOH
689
A
HOH
193
5
HOH
HOH
690
A
HOH
194
5
HOH
HOH
691
A
HOH
195
5
HOH
HOH
692
A
HOH
196
5
HOH
HOH
693
A
HOH
197
5
HOH
HOH
694
A
HOH
198
5
HOH
HOH
695
A
HOH
199
5
HOH
HOH
696
A
HOH
200
5
HOH
HOH
697
A
HOH
201
5
HOH
HOH
698
A
HOH
202
5
HOH
HOH
699
A
HOH
203
5
HOH
HOH
700
A
HOH
204
5
HOH
HOH
701
A
HOH
205
5
HOH
HOH
702
A
HOH
206
5
HOH
HOH
703
A
HOH
207
5
HOH
HOH
704
A
HOH
208
5
HOH
HOH
705
A
HOH
209
5
HOH
HOH
706
A
HOH
210
5
HOH
HOH
707
A
HOH
211
5
HOH
HOH
708
A
HOH
212
5
HOH
HOH
709
A
HOH
213
5
HOH
HOH
710
A
HOH
214
5
HOH
HOH
711
A
HOH
215
5
HOH
HOH
712
A
HOH
216
5
HOH
HOH
713
A
HOH
217
5
HOH
HOH
714
A
HOH
218
5
HOH
HOH
715
A
HOH
219
5
HOH
HOH
716
A
HOH
220
5
HOH
HOH
717
A
HOH
221
5
HOH
HOH
718
A
HOH
222
5
HOH
HOH
719
A
HOH
223
5
HOH
HOH
720
A
HOH
224
5
HOH
HOH
721
A
HOH
225
5
HOH
HOH
722
A
HOH
226
5
HOH
HOH
723
A
HOH
227
5
HOH
HOH
724
A
HOH
228
5
HOH
HOH
725
A
HOH
229
5
HOH
HOH
726
A
HOH
230
5
HOH
HOH
727
A
HOH
231
5
HOH
HOH
728
A
HOH
232
5
HOH
HOH
729
A
HOH
233
5
HOH
HOH
730
A
HOH
234
5
HOH
HOH
731
A
HOH
235
5
HOH
HOH
732
A
HOH
236
5
HOH
HOH
733
A
HOH
237
5
HOH
HOH
734
A
HOH
238
5
HOH
HOH
735
A
HOH
239
5
HOH
HOH
736
A
HOH
240
5
HOH
HOH
737
A
HOH
241
5
HOH
HOH
738
A
HOH
242
5
HOH
HOH
739
A
HOH
243
5
HOH
HOH
740
A
HOH
244
5
HOH
HOH
741
A
HOH
245
5
HOH
HOH
742
A
HOH
246
5
HOH
HOH
743
A
HOH
247
5
HOH
HOH
744
A
HOH
248
5
HOH
HOH
745
A
HOH
249
5
HOH
HOH
746
A
HOH
250
5
HOH
HOH
747
A
HOH
251
5
HOH
HOH
748
A
HOH
252
5
HOH
HOH
749
A
HOH
253
5
HOH
HOH
750
A
HOH
254
5
HOH
HOH
751
A
HOH
255
5
HOH
HOH
752
A
HOH
256
5
HOH
HOH
753
A
HOH
257
5
HOH
HOH
754
A
HOH
258
5
HOH
HOH
755
A
HOH
259
5
HOH
HOH
756
A
HOH
260
5
HOH
HOH
757
A
HOH
261
5
HOH
HOH
758
A
HOH
262
5
HOH
HOH
759
A
HOH
263
5
HOH
HOH
760
A
HOH
264
5
HOH
HOH
761
A
HOH
265
5
HOH
HOH
762
A
HOH
266
5
HOH
HOH
763
A
HOH
267
5
HOH
HOH
764
A
HOH
268
5
HOH
HOH
765
A
HOH
269
5
HOH
HOH
766
A
HOH
270
5
HOH
HOH
767
A
HOH
271
5
HOH
HOH
768
A
HOH
272
5
HOH
HOH
769
A
HOH
273
5
HOH
HOH
770
A
HOH
274
5
HOH
HOH
771
A
HOH
275
5
HOH
HOH
772
A
HOH
276
5
HOH
HOH
773
A
HOH
277
5
HOH
HOH
774
A
HOH
278
5
HOH
HOH
775
A
HOH
279
5
HOH
HOH
776
A
HOH
280
5
HOH
HOH
777
A
HOH
281
5
HOH
HOH
778
A
HOH
282
5
HOH
HOH
779
A
HOH
283
5
HOH
HOH
780
A
HOH
284
5
HOH
HOH
781
A
HOH
285
5
HOH
HOH
782
A
HOH
286
5
HOH
HOH
783
A
HOH
287
5
HOH
HOH
784
A
HOH
288
5
HOH
HOH
785
A
HOH
289
5
HOH
HOH
786
A
HOH
290
5
HOH
HOH
787
A
HOH
291
5
HOH
HOH
788
A
HOH
292
5
HOH
HOH
789
A
HOH
293
5
HOH
HOH
790
A
HOH
294
5
HOH
HOH
791
A
HOH
295
5
HOH
HOH
792
A
HOH
296
5
HOH
HOH
793
A
HOH
297
5
HOH
HOH
794
A
HOH
298
5
HOH
HOH
795
A
HOH
299
5
HOH
HOH
796
A
HOH
300
5
HOH
HOH
797
A
HOH
301
5
HOH
HOH
798
A
HOH
302
5
HOH
HOH
799
A
HOH
303
5
HOH
HOH
800
A
HOH
304
5
HOH
HOH
801
A
HOH
305
5
HOH
HOH
802
A
HOH
306
5
HOH
HOH
803
A
HOH
307
5
HOH
HOH
804
A
HOH
308
5
HOH
HOH
805
A
HOH
309
5
HOH
HOH
806
A
HOH
310
5
HOH
HOH
807
A
HOH
311
5
HOH
HOH
808
A
HOH
312
5
HOH
HOH
809
A
HOH
313
5
HOH
HOH
810
A
HOH
314
5
HOH
HOH
811
A
HOH
315
5
HOH
HOH
812
A
HOH
316
5
HOH
HOH
813
A
HOH
317
5
HOH
HOH
814
A
HOH
318
5
HOH
HOH
815
A
HOH
319
5
HOH
HOH
816
A
HOH
320
5
HOH
HOH
817
A
HOH
321
5
HOH
HOH
818
A
HOH
322
5
HOH
HOH
819
A
HOH
323
5
HOH
HOH
820
A
HOH
324
5
HOH
HOH
821
A
HOH
325
5
HOH
HOH
822
A
HOH
326
5
HOH
HOH
823
A
HOH
327
5
HOH
HOH
824
A
HOH
328
5
HOH
HOH
825
A
HOH
329
5
HOH
HOH
826
A
HOH
330
5
HOH
HOH
827
A
HOH
331
5
HOH
HOH
828
A
HOH
332
5
HOH
HOH
829
A
HOH
333
5
HOH
HOH
830
A
HOH
334
5
HOH
HOH
831
A
HOH
335
5
HOH
HOH
832
A
HOH
336
5
HOH
HOH
833
A
HOH
337
5
HOH
HOH
834
A
HOH
338
5
HOH
HOH
835
A
HOH
339
5
HOH
HOH
836
A
HOH
340
5
HOH
HOH
837
A
HOH
341
5
HOH
HOH
838
A
HOH
342
5
HOH
HOH
839
A
HOH
343
5
HOH
HOH
840
A
HOH
344
5
HOH
HOH
841
A
HOH
345
5
HOH
HOH
842
A
HOH
346
5
HOH
HOH
843
A
HOH
347
5
HOH
HOH
844
A
HOH
348
5
HOH
HOH
845
A
HOH
349
5
HOH
HOH
846
A
HOH
350
5
HOH
HOH
847
A
HOH
351
5
HOH
HOH
848
A
HOH
352
5
HOH
HOH
849
A
HOH
353
5
HOH
HOH
850
A
HOH
354
5
HOH
HOH
851
A
HOH
355
5
HOH
HOH
852
A
HOH
356
5
HOH
HOH
853
A
HOH
357
5
HOH
HOH
854
A
HOH
358
5
HOH
HOH
855
A
HOH
359
5
HOH
HOH
856
A
HOH
360
5
HOH
HOH
857
A
HOH
361
5
HOH
HOH
858
A
HOH
362
5
HOH
HOH
859
A
HOH
363
5
HOH
HOH
860
A
HOH
364
5
HOH
HOH
861
A
HOH
365
5
HOH
HOH
862
A
HOH
366
5
HOH
HOH
863
A
HOH
367
5
HOH
HOH
864
A
HOH
368
5
HOH
HOH
865
A
HOH
369
5
HOH
HOH
866
A
HOH
370
5
HOH
HOH
867
A
HOH
371
5
HOH
HOH
868
A
HOH
372
5
HOH
HOH
869
A
HOH
373
5
HOH
HOH
870
A
HOH
374
5
HOH
HOH
871
A
HOH
375
5
HOH
HOH
872
A
HOH
376
5
HOH
HOH
873
A
HOH
377
5
HOH
HOH
874
A
HOH
378
5
HOH
HOH
875
A
HOH
379
5
HOH
HOH
876
A
HOH
380
5
HOH
HOH
877
A
HOH
381
5
HOH
HOH
878
A
HOH
382
5
HOH
HOH
879
A
HOH
383
5
HOH
HOH
880
A
HOH
384
5
HOH
HOH
881
A
HOH
385
5
HOH
HOH
882
A
HOH
386
5
HOH
HOH
883
A
HOH
387
5
HOH
HOH
884
A
HOH
388
5
HOH
HOH
885
A
HOH
389
5
HOH
HOH
886
A
HOH
390
5
HOH
HOH
887
A
HOH
391
5
HOH
HOH
888
A
HOH
392
5
HOH
HOH
889
A
HOH
393
5
HOH
HOH
890
A
HOH
394
5
HOH
HOH
891
A
HOH
395
5
HOH
HOH
892
A
HOH
396
5
HOH
HOH
893
A
HOH
397
5
HOH
HOH
894
A
HOH
398
5
HOH
HOH
895
A
HOH
399
5
HOH
HOH
896
A
HOH
400
5
HOH
HOH
897
A
HOH
401
5
HOH
HOH
898
A
HOH
402
5
HOH
HOH
899
A
HOH
403
5
HOH
HOH
900
A
HOH
404
5
HOH
HOH
901
A
HOH
405
5
HOH
HOH
902
A
HOH
406
5
HOH
HOH
903
A
HOH
407
5
HOH
HOH
904
A
HOH
408
5
HOH
HOH
905
A
HOH
409
5
HOH
HOH
906
A
HOH
410
5
HOH
HOH
907
A
HOH
411
5
HOH
HOH
908
A
HOH
412
5
HOH
HOH
909
A
HOH
413
5
HOH
HOH
910
A
HOH
414
5
HOH
HOH
911
A
HOH
415
5
HOH
HOH
912
A
HOH
416
5
HOH
HOH
913
A
HOH
417
5
HOH
HOH
914
A
HOH
418
5
HOH
HOH
915
A
HOH
419
5
HOH
HOH
916
A
HOH
420
5
HOH
HOH
917
A
HOH
421
5
HOH
HOH
918
A
HOH
422
5
HOH
HOH
919
A
HOH
423
5
HOH
HOH
920
A
HOH
424
5
HOH
HOH
921
A
HOH
425
5
HOH
HOH
922
A
HOH
426
5
HOH
HOH
923
A
HOH
427
5
HOH
HOH
924
A
HOH
428
5
HOH
HOH
925
A
HOH
429
5
HOH
HOH
926
A
HOH
430
5
HOH
HOH
927
A
HOH
431
5
HOH
HOH
928
A
HOH
432
5
HOH
HOH
929
A
HOH
433
5
HOH
HOH
930
A
HOH
434
5
HOH
HOH
931
A
HOH
435
5
HOH
HOH
932
A
HOH
436
5
HOH
HOH
933
A
HOH
437
5
HOH
HOH
934
A
HOH
438
5
HOH
HOH
935
A
HOH
439
5
HOH
HOH
936
A
HOH
440
5
HOH
HOH
937
A
HOH
441
5
HOH
HOH
938
A
HOH
442
5
HOH
HOH
939
A
HOH
443
5
HOH
HOH
940
A
HOH
444
5
HOH
HOH
941
A
HOH
445
5
HOH
HOH
942
A
HOH
446
5
HOH
HOH
943
A
HOH
447
5
HOH
HOH
944
A
HOH
448
5
HOH
HOH
945
A
HOH
449
5
HOH
HOH
946
A
HOH
450
5
HOH
HOH
947
A
HOH
451
5
HOH
HOH
948
A
HOH
452
5
HOH
HOH
949
A
HOH
453
5
HOH
HOH
950
A
HOH
454
5
HOH
HOH
951
A
HOH
455
5
HOH
HOH
952
A
HOH
456
5
HOH
HOH
953
A
HOH
457
5
HOH
HOH
954
A
HOH
458
5
HOH
HOH
955
A
HOH
459
5
HOH
HOH
956
A
HOH
460
5
HOH
HOH
957
A
HOH
461
5
HOH
HOH
958
A
HOH
462
5
HOH
HOH
959
A
HOH
463
5
HOH
HOH
960
A
HOH
464
5
HOH
HOH
961
A
HOH
465
5
HOH
HOH
962
A
HOH
466
5
HOH
HOH
963
A
HOH
467
5
HOH
HOH
964
A
HOH
468
5
HOH
HOH
965
A
HOH
469
5
HOH
HOH
966
A
HOH
470
5
HOH
HOH
967
A
HOH
471
5
HOH
HOH
968
A
HOH
472
5
HOH
HOH
969
A
HOH
473
5
HOH
HOH
970
A
HOH
474
5
HOH
HOH
971
A
HOH
475
5
HOH
HOH
972
A
n
1
-11
A
n
2
-10
A
n
3
-9
A
n
4
-8
A
n
5
-7
A
n
6
-6
A
n
7
-5
A
n
8
-4
A
n
9
-3
A
n
10
-2
A
n
11
-1
A
ALA
0
n
12
ALA
0
A
THR
1
n
13
THR
1
A
PRO
2
n
14
PRO
2
A
ASP
3
n
15
ASP
3
A
PHE
4
n
16
PHE
4
A
PRO
5
n
17
PRO
5
A
THR
6
n
18
THR
6
A
HIS
7
n
19
HIS
7
A
PHE
8
n
20
PHE
8
A
PRO
9
n
21
PRO
9
A
LYS
10
n
22
LYS
10
A
SER
11
n
23
SER
11
A
SER
12
n
24
SER
12
A
ILE
13
n
25
ILE
13
A
GLY
14
n
26
GLY
14
A
ILE
15
n
27
ILE
15
A
GLN
16
n
28
GLN
16
A
ASN
17
n
29
ASN
17
A
GLU
18
n
30
GLU
18
A
LEU
19
n
31
LEU
19
A
ALA
20
n
32
ALA
20
A
GLY
21
n
33
GLY
21
A
LEU
22
n
34
LEU
22
A
VAL
23
n
35
VAL
23
A
VAL
24
n
36
VAL
24
A
ALA
25
n
37
ALA
25
A
MET
26
n
38
MET
26
A
PRO
27
n
39
PRO
27
A
ALA
28
n
40
ALA
28
A
ASN
29
n
41
ASN
29
A
SER
30
n
42
SER
30
A
ALA
31
n
43
ALA
31
A
GLN
32
n
44
GLN
32
A
LYS
33
n
45
LYS
33
A
PHE
34
n
46
PHE
34
A
GLY
35
n
47
GLY
35
A
TYR
36
n
48
TYR
36
A
VAL
37
n
49
VAL
37
A
LYS
38
n
50
LYS
38
A
SER
39
n
51
SER
39
A
ALA
40
n
52
ALA
40
A
GLN
41
n
53
GLN
41
A
GLY
42
n
54
GLY
42
A
ASP
43
n
55
ASP
43
A
ALA
44
n
56
ALA
44
A
LEU
45
n
57
LEU
45
A
PHE
46
n
58
PHE
46
A
MET
47
n
59
MET
47
A
LEU
48
n
60
LEU
48
A
THR
49
n
61
THR
49
A
LYS
50
n
62
LYS
50
A
ASP
51
n
63
ASP
51
A
MET
52
n
64
MET
52
A
ASN
53
n
65
ASN
53
A
GLN
54
n
66
GLN
54
A
GLY
55
n
67
GLY
55
A
SER
56
n
68
SER
56
A
TYR
57
n
69
TYR
57
A
GLN
58
n
70
GLN
58
A
ARG
59
n
71
ARG
59
A
PRO
60
n
72
PRO
60
A
PRO
61
n
73
PRO
61
A
SER
62
n
74
SER
62
A
LEU
63
n
75
LEU
63
A
GLN
64
n
76
GLN
64
A
ASP
65
n
77
ASP
65
A
GLY
66
n
78
GLY
66
A
LYS
67
n
79
LYS
67
A
ASN
68
n
80
ASN
68
A
TYR
69
n
81
TYR
69
A
GLN
70
n
82
GLN
70
A
ASN
71
n
83
ASN
71
A
TRP
72
n
84
TRP
72
A
GLN
73
n
85
GLN
73
A
THR
74
n
86
THR
74
A
HIS
75
n
87
HIS
75
A
THR
76
n
88
THR
76
A
VAL
77
n
89
VAL
77
A
GLU
78
n
90
GLU
78
A
LEU
79
n
91
LEU
79
A
VAL
80
n
92
VAL
80
A
SER
81
n
93
SER
81
A
TYR
82
n
94
TYR
82
A
PRO
83
n
95
PRO
83
A
CYS
84
n
96
CYS
84
A
GLU
85
n
97
GLU
85
A
MET
86
n
98
MET
86
A
ASP
87
n
99
ASP
87
A
ASP
88
n
100
ASP
88
A
LYS
89
n
101
LYS
89
A
ALA
90
n
102
ALA
90
A
ALA
91
n
103
ALA
91
A
VAL
92
n
104
VAL
92
A
GLU
93
n
105
GLU
93
A
THR
94
n
106
THR
94
A
ARG
95
n
107
ARG
95
A
LYS
96
n
108
LYS
96
A
GLN
97
n
109
GLN
97
A
ALA
98
n
110
ALA
98
A
MET
99
n
111
MET
99
A
LEU
100
n
112
LEU
100
A
TRP
101
n
113
TRP
101
A
LEU
102
n
114
LEU
102
A
ALA
103
n
115
ALA
103
A
THR
104
n
116
THR
104
A
HIS
105
n
117
HIS
105
A
PHE
106
n
118
PHE
106
A
THR
107
n
119
THR
107
A
THR
108
n
120
THR
108
A
HIS
109
n
121
HIS
109
A
ILE
110
n
122
ILE
110
A
ASP
111
n
123
ASP
111
A
GLN
112
n
124
GLN
112
A
SER
113
n
125
SER
113
A
ASN
114
n
126
ASN
114
A
HIS
115
n
127
HIS
115
A
GLN
116
n
128
GLN
116
A
PRO
117
n
129
PRO
117
A
LEU
118
n
130
LEU
118
A
ALA
119
n
131
ALA
119
A
PRO
120
n
132
PRO
120
A
ILE
121
n
133
ILE
121
A
GLN
122
n
134
GLN
122
A
SER
123
n
135
SER
123
A
GLU
124
n
136
GLU
124
A
ASP
125
n
137
ASP
125
A
GLY
126
n
138
GLY
126
A
ARG
127
n
139
ARG
127
A
PHE
128
n
140
PHE
128
A
VAL
129
n
141
VAL
129
A
ILE
130
n
142
ILE
130
A
GLU
131
n
143
GLU
131
A
ILE
132
n
144
ILE
132
A
THR
133
n
145
THR
133
A
ASN
134
n
146
ASN
134
A
ALA
135
n
147
ALA
135
A
LYS
136
n
148
LYS
136
A
HIS
137
n
149
HIS
137
A
VAL
138
n
150
VAL
138
A
ILE
139
n
151
ILE
139
A
ALA
140
n
152
ALA
140
A
ALA
141
n
153
ALA
141
A
GLY
142
n
154
GLY
142
A
ASN
143
n
155
ASN
143
A
GLY
144
n
156
GLY
144
A
ILE
145
n
157
ILE
145
A
SER
146
n
158
SER
146
A
ALA
147
n
159
ALA
147
A
GLU
148
n
160
GLU
148
A
SER
149
n
161
SER
149
A
GLN
150
n
162
GLN
150
A
GLY
151
n
163
GLY
151
A
GLN
152
n
164
GLN
152
A
THR
153
n
165
THR
153
A
ILE
154
n
166
ILE
154
A
THR
155
n
167
THR
155
A
MET
156
n
168
MET
156
A
THR
157
n
169
THR
157
A
PRO
158
n
170
PRO
158
A
SER
159
n
171
SER
159
A
GLY
160
n
172
GLY
160
A
GLN
161
n
173
GLN
161
A
GLN
162
n
174
GLN
162
A
ALA
163
n
175
ALA
163
A
THR
164
n
176
THR
164
A
VAL
165
n
177
VAL
165
A
GLY
166
n
178
GLY
166
A
VAL
167
n
179
VAL
167
A
ALA
168
n
180
ALA
168
A
ALA
169
n
181
ALA
169
A
LYS
170
n
182
LYS
170
A
GLY
171
n
183
GLY
171
A
PHE
172
n
184
PHE
172
A
GLY
173
n
185
GLY
173
A
THR
174
n
186
THR
174
A
SER
175
n
187
SER
175
A
ALA
176
n
188
ALA
176
A
THR
177
n
189
THR
177
A
PRO
178
n
190
PRO
178
A
GLU
179
n
191
GLU
179
A
LEU
180
n
192
LEU
180
A
ARG
181
n
193
ARG
181
A
LEU
182
n
194
LEU
182
A
LEU
183
n
195
LEU
183
A
GLU
184
n
196
GLU
184
A
SER
185
n
197
SER
185
A
ALA
186
n
198
ALA
186
A
PRO
187
n
199
PRO
187
A
TRP
188
n
200
TRP
188
A
TYR
189
n
201
TYR
189
A
GLN
190
n
202
GLN
190
A
LYS
191
n
203
LYS
191
A
SER
192
n
204
SER
192
A
LEU
193
n
205
LEU
193
A
LYS
194
n
206
LYS
194
A
SER
195
n
207
SER
195
A
GLN
196
n
208
GLN
196
A
PHE
197
n
209
PHE
197
A
ALA
198
n
210
ALA
198
A
SER
199
n
211
SER
199
A
LEU
200
n
212
LEU
200
A
THR
201
n
213
THR
201
A
SER
202
n
214
SER
202
A
ALA
203
n
215
ALA
203
A
GLU
204
n
216
GLU
204
A
ASN
205
n
217
ASN
205
A
LEU
206
n
218
LEU
206
A
ASP
207
n
219
ASP
207
A
ASP
208
n
220
ASP
208
A
LYS
209
n
221
LYS
209
A
GLU
210
n
222
GLU
210
A
LEU
211
n
223
LEU
211
A
ALA
212
n
224
ALA
212
A
ALA
213
n
225
ALA
213
A
ASN
214
n
226
ASN
214
A
VAL
215
n
227
VAL
215
A
PHE
216
n
228
PHE
216
A
ALA
217
n
229
ALA
217
A
TYR
218
n
230
TYR
218
A
LEU
219
n
231
LEU
219
A
THR
220
n
232
THR
220
A
SER
221
n
233
SER
221
A
ILE
222
n
234
ILE
222
A
TYR
223
n
235
TYR
223
A
LEU
224
n
236
LEU
224
A
LYS
225
n
237
LYS
225
A
THR
226
n
238
THR
226
A
ALA
227
n
239
ALA
227
A
GLU
228
n
240
GLU
228
A
LEU
229
n
241
LEU
229
A
ALA
230
n
242
ALA
230
A
LYS
231
n
243
LYS
231
A
LYS
232
n
244
LYS
232
A
PHE
233
n
245
PHE
233
A
GLY
234
n
246
GLY
234
A
ILE
235
n
247
ILE
235
A
TYR
236
n
248
TYR
236
A
ILE
237
n
249
ILE
237
A
ASN
238
n
250
ASN
238
A
GLU
239
n
251
GLU
239
A
TRP
240
n
252
TRP
240
A
ASP
241
n
253
ASP
241
A
PRO
242
n
254
PRO
242
A
MET
243
n
255
MET
243
A
SER
244
n
256
SER
244
A
GLU
245
n
257
GLU
245
A
GLN
246
n
258
GLN
246
A
ILE
247
n
259
ILE
247
A
THR
248
n
260
THR
248
A
PRO
249
n
261
PRO
249
A
ASN
250
n
262
ASN
250
A
ALA
251
n
263
ALA
251
A
ASN
252
n
264
ASN
252
A
GLY
253
n
265
GLY
253
A
LEU
254
n
266
LEU
254
A
THR
255
n
267
THR
255
A
ASP
256
n
268
ASP
256
A
PRO
257
n
269
PRO
257
A
LYS
258
n
270
LYS
258
A
VAL
259
n
271
VAL
259
A
LYS
260
n
272
LYS
260
A
ASN
261
n
273
ASN
261
A
ALA
262
n
274
ALA
262
A
TRP
263
n
275
TRP
263
A
GLU
264
n
276
GLU
264
A
ILE
265
n
277
ILE
265
A
LEU
266
n
278
LEU
266
A
PRO
267
n
279
PRO
267
A
ARG
268
n
280
ARG
268
A
THR
269
n
281
THR
269
A
LYS
270
n
282
LYS
270
A
PRO
271
n
283
PRO
271
A
SER
272
n
284
SER
272
A
LYS
273
n
285
LYS
273
A
ILE
274
n
286
ILE
274
A
VAL
275
n
287
VAL
275
A
GLU
276
n
288
GLU
276
A
ILE
277
n
289
ILE
277
A
LEU
278
n
290
LEU
278
A
SER
279
n
291
SER
279
A
LYS
280
n
292
LYS
280
A
SER
281
n
293
SER
281
A
ASP
282
n
294
ASP
282
A
ALA
283
n
295
ALA
283
A
LYS
284
n
296
LYS
284
A
ALA
285
n
297
ALA
285
A
VAL
286
n
298
VAL
286
A
MET
287
n
299
MET
287
A
LYS
288
n
300
LYS
288
A
HIS
289
n
301
HIS
289
A
ILE
290
n
302
ILE
290
A
LYS
291
n
303
LYS
291
A
PRO
292
n
304
PRO
292
A
GLN
293
n
305
GLN
293
A
LEU
294
n
306
LEU
294
A
GLN
295
n
307
GLN
295
A
SER
296
n
308
SER
296
A
ARG
297
n
309
ARG
297
A
TYR
298
n
310
TYR
298
A
SER
299
n
311
SER
299
A
GLU
300
n
312
GLU
300
A
SER
301
n
313
SER
301
A
LEU
302
n
314
LEU
302
A
SER
303
n
315
SER
303
A
LYS
304
n
316
LYS
304
A
ASN
305
n
317
ASN
305
A
VAL
306
n
318
VAL
306
A
PHE
307
n
319
PHE
307
A
GLN
308
n
320
GLN
308
A
TYR
309
n
321
TYR
309
A
PHE
310
n
322
PHE
310
A
GLN
311
n
323
GLN
311
A
ASP
312
n
324
ASP
312
A
GLY
313
n
325
GLY
313
A
GLY
314
n
326
GLY
314
A
GLU
315
n
327
GLU
315
A
VAL
316
n
328
VAL
316
A
ALA
317
n
329
ALA
317
A
GLY
318
n
330
GLY
318
A
HIS
319
n
331
HIS
319
A
GLY
320
n
332
GLY
320
A
ILE
321
n
333
ILE
321
A
ASN
322
n
334
ASN
322
A
ASN
323
n
335
ASN
323
A
ALA
324
n
336
ALA
324
A
THR
325
n
337
THR
325
A
VAL
326
n
338
VAL
326
A
GLY
327
n
339
GLY
327
A
ASP
328
n
340
ASP
328
A
LYS
329
n
341
LYS
329
A
HIS
330
n
342
HIS
330
A
SER
331
n
343
SER
331
A
PRO
332
n
344
PRO
332
A
GLU
333
n
345
GLU
333
A
LEU
334
n
346
LEU
334
A
ALA
335
n
347
ALA
335
A
ILE
336
n
348
ILE
336
A
LEU
337
n
349
LEU
337
A
PHE
338
n
350
PHE
338
A
GLU
339
n
351
GLU
339
A
PHE
340
n
352
PHE
340
A
ARG
341
n
353
ARG
341
A
THR
342
n
354
THR
342
A
VAL
343
n
355
VAL
343
A
PRO
344
n
356
PRO
344
A
ASN
345
n
357
ASN
345
A
GLU
346
n
358
GLU
346
A
LEU
347
n
359
LEU
347
A
GLN
348
n
360
GLN
348
A
SER
349
n
361
SER
349
A
TYR
350
n
362
TYR
350
A
LEU
351
n
363
LEU
351
A
PRO
352
n
364
PRO
352
A
LYS
353
n
365
LYS
353
A
THR
354
n
366
THR
354
A
n
367
355
A
n
368
356
A
n
369
357
A
n
370
358
A
n
371
359
A
n
372
360
A
n
373
361
A
n
374
362
A
n
375
363
A
n
376
364
A
n
377
365
A
n
378
366
A
n
379
367
A
n
380
368
A
n
381
369
A
n
382
370
A
n
383
371
A
n
384
372
A
n
385
373
A
n
386
374
A
n
387
375
A
n
388
376
A
n
389
377
A
n
390
378
A
n
391
379
A
n
392
380
A
n
393
381
A
n
394
382
A
n
395
383
A
n
396
384
A
0.2710
0.1134
0.1133
0.0000
-0.2726
0.0000
0.0019
-0.0032
-0.0072
0.0027
0.0016
-0.0119
0.0058
-0.0062
-0.0035
-0.0261
-0.0213
0.0223
0.0291
0.0178
-0.0138
refined
34.5350
89.5371
16.5599
X-RAY DIFFRACTION
1.3318
0.4477
-0.3194
0.0000
0.1994
0.1749
0.0041
-0.0104
-0.0115
-0.0049
-0.0057
0.0103
0.0060
-0.0055
0.0015
-0.0296
-0.0099
0.0195
0.0466
0.0182
-0.0195
refined
46.3864
90.3370
6.3360
X-RAY DIFFRACTION
0.3911
0.2422
0.1703
0.0329
0.3412
0.4385
0.0010
0.0085
-0.0137
-0.0129
0.0080
-0.0011
0.0089
-0.0035
-0.0090
-0.0440
-0.0060
0.0081
0.0451
-0.0235
0.0061
refined
55.5040
88.1814
-7.2006
X-RAY DIFFRACTION
0.4529
0.1787
0.6030
0.1999
-0.0012
0.7011
0.0004
-0.0236
0.0114
0.0153
-0.0141
-0.0034
0.0042
-0.0294
0.0136
-0.0492
-0.0403
0.0136
0.0426
0.0005
-0.0200
refined
46.7058
98.8180
11.3013
X-RAY DIFFRACTION
0.9322
0.1192
-0.0044
0.0000
0.2868
0.0537
-0.0024
-0.0229
-0.0049
-0.0063
0.0003
-0.0037
0.0047
0.0066
0.0021
-0.0281
-0.0073
0.0104
0.0556
0.0072
-0.0217
refined
54.3456
93.4398
9.5016
X-RAY DIFFRACTION
0.0858
0.2725
0.4546
0.2234
-0.2134
0.4737
-0.0011
-0.0099
0.0197
-0.0161
-0.0079
0.0024
-0.0219
-0.0124
0.0090
-0.0369
-0.0084
0.0320
0.0228
0.0079
-0.0040
refined
40.9819
99.3534
2.8013
X-RAY DIFFRACTION
0.7441
0.0201
-0.3086
0.0000
0.0704
0.4553
0.0020
-0.0075
0.0076
0.0073
0.0091
0.0050
-0.0129
-0.0060
-0.0111
-0.1005
0.0310
0.0252
0.1227
-0.0210
-0.0259
refined
9.4222
91.7074
13.1352
X-RAY DIFFRACTION
1.2512
0.2472
0.6577
0.0493
-0.2804
0.0519
0.0034
-0.0328
0.0018
-0.0070
-0.0045
0.0006
0.0014
-0.0111
0.0010
-0.1033
0.0022
-0.0110
0.0847
0.0068
-0.0020
refined
12.5680
85.9742
3.9980
X-RAY DIFFRACTION
1.1289
0.0987
-0.5129
0.0190
-0.2537
0.4781
-0.0063
-0.0037
0.0029
-0.0158
0.0082
-0.0042
0.0149
-0.0028
-0.0020
-0.0417
0.0013
0.0004
0.0655
0.0254
-0.0335
refined
20.8328
86.0856
-7.0622
X-RAY DIFFRACTION
1.5086
-0.1538
-0.4980
0.0000
-0.1776
0.9436
0.0050
-0.0089
-0.0381
0.0112
-0.0138
-0.0033
0.0088
-0.0236
0.0088
-0.1309
-0.0536
-0.0272
0.1140
0.0367
0.0058
refined
12.0601
78.6433
4.7468
X-RAY DIFFRACTION
0.6195
0.2401
0.1749
0.1010
-0.2285
0.0976
0.0052
-0.0105
-0.0045
0.0029
-0.0006
-0.0113
0.0007
-0.0118
-0.0046
-0.0389
-0.0329
-0.0101
0.0591
0.0252
-0.0227
refined
26.3480
87.0073
15.8391
X-RAY DIFFRACTION
0.0035
0.0461
0.0545
0.0472
0.1117
0.0802
0.0004
-0.0003
0.0034
-0.0021
-0.0009
0.0011
-0.0057
0.0007
0.0004
-0.0095
-0.0021
0.0099
0.0221
-0.0198
0.0008
refined
32.4123
105.0380
10.6074
X-RAY DIFFRACTION
0.0481
0.0398
0.0404
0.0000
0.0206
0.0112
0.0005
-0.0004
-0.0008
-0.0035
-0.0007
-0.0011
0.0008
-0.0003
0.0002
-0.0068
-0.0086
-0.0149
0.0087
-0.0023
-0.0011
refined
33.7842
88.8292
9.9572
X-RAY DIFFRACTION
A
0
A
17
X-RAY DIFFRACTION
1
{ A|0 - A|17 }
A
18
A
53
X-RAY DIFFRACTION
2
{ A|18 - A|53 }
A
54
A
78
X-RAY DIFFRACTION
3
{ A|54 - A|78 }
A
79
A
116
X-RAY DIFFRACTION
4
{ A|79 - A|116 }
A
117
A
143
X-RAY DIFFRACTION
5
{ A|117 - A|143 }
A
144
A
170
X-RAY DIFFRACTION
6
{ A|144 - A|170 }
A
171
A
206
X-RAY DIFFRACTION
7
{ A|171 - A|206 }
A
207
A
236
X-RAY DIFFRACTION
8
{ A|207 - A|236 }
A
237
A
269
X-RAY DIFFRACTION
9
{ A|237 - A|269 }
A
270
A
319
X-RAY DIFFRACTION
10
{ A|270 - A|319 }
A
320
A
343
X-RAY DIFFRACTION
11
{ A|320 - A|343 }
A
344
A
354
X-RAY DIFFRACTION
12
{ A|344 - A|354 }
A
401
A
401
X-RAY DIFFRACTION
13
{ A|401 - A|401 }
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
6720
-212
30400
A
ADP
401
B
O3B
ADP
1_555
A
MN
402
C
MN
MN
1_555
A
HOH
809
K
O
HOH
1_555
153.2
A
ADP
401
B
O3B
ADP
1_555
A
MN
402
C
MN
MN
1_555
A
HOH
927
K
O
HOH
1_555
86.5
A
HOH
809
K
O
HOH
1_555
A
MN
402
C
MN
MN
1_555
A
HOH
927
K
O
HOH
1_555
84.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_664
-y+1,-x+1,-z-1/4
crystal symmetry operation
129.1300000000
129.1300000000
-19.2775000000
1
A
ASN
-11
A
ASN
1
1
Y
1
A
ALA
-10
A
ALA
2
1
Y
1
A
GLN
-9
A
GLN
3
1
Y
1
A
PRO
-8
A
PRO
4
1
Y
1
A
ASN
-7
A
ASN
5
1
Y
1
A
LEU
-6
A
LEU
6
1
Y
1
A
GLY
-5
A
GLY
7
1
Y
1
A
ARG
-4
A
ARG
8
1
Y
1
A
SER
-3
A
SER
9
1
Y
1
A
THR
-2
A
THR
10
1
Y
1
A
LYS
-1
A
LYS
11
1
Y
1
A
GLU
355
A
GLU
367
1
Y
1
A
SER
356
A
SER
368
1
Y
1
A
THR
357
A
THR
369
1
Y
1
A
THR
358
A
THR
370
1
Y
1
A
LYS
359
A
LYS
371
1
Y
1
A
SER
360
A
SER
372
1
Y
1
A
GLU
361
A
GLU
373
1
Y
1
A
VAL
362
A
VAL
374
1
Y
1
A
LYS
363
A
LYS
375
1
Y
1
A
LEU
364
A
LEU
376
1
Y
1
A
LEU
365
A
LEU
377
1
Y
1
A
ASP
366
A
ASP
378
1
Y
1
A
GLN
367
A
GLN
379
1
Y
1
A
PHE
368
A
PHE
380
1
Y
1
A
ASP
369
A
ASP
381
1
Y
1
A
PRO
370
A
PRO
382
1
Y
1
A
MET
371
A
MET
383
1
Y
1
A
LYS
372
A
LYS
384
1
Y
1
A
ARG
373
A
ARG
385
1
Y
1
A
LYS
374
A
LYS
386
1
Y
1
A
THR
375
A
THR
387
1
Y
1
A
VAL
376
A
VAL
388
1
Y
1
A
ILE
377
A
ILE
389
1
Y
1
A
GLN
378
A
GLN
390
1
Y
1
A
GLN
379
A
GLN
391
1
Y
1
A
VAL
380
A
VAL
392
1
Y
1
A
GLU
381
A
GLU
393
1
Y
1
A
SER
382
A
SER
394
1
Y
1
A
LEU
383
A
LEU
395
1
Y
1
A
VAL
384
A
VAL
396
1
Y
1
A
LYS
10
-138.85
-148.84
1
A
ASP
51
-118.96
-88.64
1
A
ASN
238
51.36
-113.83
1
A
GLU
264
72.07
-57.73
1
A
ALA
317
-155.81
67.26
29.35
-2.7917
0.0000
0.0000
-2.7917
0.0000
5.5835
0.9331
0.9240
0.1882
0.1730
0.1735
2.10
46.22
1210
38592
38592
3.14
99.96
0.131
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
4E1D
Engh & Huber
0.234
2.10
46.22
472
3288
63
0
2753
0.010
2885
HARMONIC
2.00
1.10
3930
HARMONIC
2.00
982
SINUSOIDAL
2.00
79
HARMONIC
2.00
419
HARMONIC
5.00
2885
HARMONIC
20.00
0
SEMIHARMONIC
5.00
3.26
19.27
0
384
SEMIHARMONIC
5.00
3554
SEMIHARMONIC
4.00
0.2264
0.1914
0.1925
2.16
93
2858
2951
19
3.15
99.96
27.45
2.1
50
4E1F
72859
72859
0
0
0.052
1
0.363
10.1
100
0.281
2.1
2.15
10.1
1
9.9
100
data collection
MAR345dtb
phasing
MOLREP
refinement
BUSTER
2.11.2
data reduction
XDS
data scaling
XSCALE
Structure of a VgrG Vibrio cholerae toxin ACD domain Glu16Gln mutant in complex with ADP and Mn++
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
A
PRO
60
A
PRO
72
HELX_P
A
GLN
64
A
GLN
76
5
1
5
A
ASP
88
A
ASP
100
HELX_P
A
SER
113
A
SER
125
1
2
26
A
THR
157
A
THR
169
HELX_P
A
SER
159
A
SER
171
5
3
3
A
LYS
170
A
LYS
182
HELX_P
A
PHE
172
A
PHE
184
5
4
3
A
THR
177
A
THR
189
HELX_P
A
SER
185
A
SER
197
1
5
9
A
LYS
191
A
LYS
203
HELX_P
A
THR
201
A
THR
213
1
6
11
A
ASP
208
A
ASP
220
HELX_P
A
GLY
234
A
GLY
246
1
7
27
A
ASP
241
A
ASP
253
HELX_P
A
GLN
246
A
GLN
258
5
8
6
A
ASP
256
A
ASP
268
HELX_P
A
GLU
264
A
GLU
276
1
9
9
A
LYS
270
A
LYS
282
HELX_P
A
LEU
278
A
LEU
290
5
10
9
A
SER
279
A
SER
291
HELX_P
A
SER
296
A
SER
308
1
11
18
A
SER
299
A
SER
311
HELX_P
A
ASP
312
A
ASP
324
1
12
14
A
PRO
344
A
PRO
356
HELX_P
A
LEU
351
A
LEU
363
5
13
8
metalc
2.520
A
ADP
401
B
O3B
ADP
1_555
A
MN
402
C
MN
MN
1_555
metalc
2.042
A
MN
402
C
MN
MN
1_555
A
HOH
809
K
O
HOH
1_555
metalc
2.720
A
MN
402
C
MN
MN
1_555
A
HOH
927
K
O
HOH
1_555
TOXIN
alpha/beta protein, G-actin cross-linking toxin, G-actin (substrate), TOXIN
Q9KS45_VIBCH
UNP
1
716
Q9KS45
NAQPNLGRSTKATPDFPTHFPKSSIGIENELAGLVVAMPANSAQKFGYVKSAQGDALFMLTKDMNQGSYQRPPSLQDGKN
YQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAE
SQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAE
LAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQ
YFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTESTTKSEVKLLDQFDPMKRKTVIQQVESLV
716
1111
4E1F
-11
384
Q9KS45
A
1
1
396
1
GLU
engineered mutation
GLN
16
4E1F
A
Q9KS45
UNP
743
28
BINDING SITE FOR RESIDUE ADP A 401
A
ADP
401
Software
17
BINDING SITE FOR RESIDUE MN A 402
A
MN
402
Software
4
BINDING SITE FOR RESIDUE SO4 A 403
A
SO4
403
Software
7
BINDING SITE FOR RESIDUE SO4 A 404
A
SO4
404
Software
6
BINDING SITE FOR RESIDUE SO4 A 405
A
SO4
405
Software
3
BINDING SITE FOR RESIDUE SO4 A 406
A
SO4
406
Software
3
BINDING SITE FOR RESIDUE SO4 A 407
A
SO4
407
Software
6
BINDING SITE FOR RESIDUE SO4 A 408
A
SO4
408
Software
8
BINDING SITE FOR RESIDUE SO4 A 409
A
SO4
409
Software
5
A
PHE
4
A
PHE
16
17
1_555
A
SER
12
A
SER
24
17
1_555
A
GLY
14
A
GLY
26
17
1_555
A
ILE
15
A
ILE
27
17
1_555
A
GLN
16
A
GLN
28
17
1_555
A
VAL
80
A
VAL
92
17
1_555
A
SER
81
A
SER
93
17
1_555
A
PRO
83
A
PRO
95
17
1_555
A
THR
164
A
THR
176
17
1_555
A
ILE
321
A
ILE
333
17
1_555
A
LEU
337
A
LEU
349
17
1_555
A
MN
402
C
MN
17
1_555
A
HOH
510
K
HOH
17
1_555
A
HOH
535
K
HOH
17
1_555
A
HOH
917
K
HOH
17
1_555
A
HOH
918
K
HOH
17
1_555
A
HOH
924
K
HOH
17
1_555
A
GLU
78
A
GLU
90
4
1_555
A
ADP
401
B
ADP
4
1_555
A
HOH
809
K
HOH
4
1_555
A
HOH
927
K
HOH
4
1_555
A
GLN
32
A
GLN
44
7
1_555
A
LYS
50
A
LYS
62
7
1_555
A
GLY
55
A
GLY
67
7
8_664
A
SER
56
A
SER
68
7
8_664
A
HOH
512
K
HOH
7
1_555
A
HOH
721
K
HOH
7
1_555
A
HOH
852
K
HOH
7
1_555
A
PRO
60
A
PRO
72
6
1_555
A
PRO
61
A
PRO
73
6
1_555
A
SER
62
A
SER
74
6
1_555
A
ALA
147
A
ALA
159
6
1_555
A
HOH
588
K
HOH
6
1_555
A
HOH
764
K
HOH
6
1_555
A
PRO
178
A
PRO
190
3
1_555
A
ARG
181
A
ARG
193
3
1_555
A
HOH
851
K
HOH
3
1_555
A
GLN
190
A
GLN
202
3
1_555
A
LYS
191
A
LYS
203
3
1_555
A
SER
192
A
SER
204
3
1_555
A
PRO
257
A
PRO
269
6
1_555
A
LYS
260
A
LYS
272
6
1_555
A
ARG
341
A
ARG
353
6
1_555
A
HOH
755
K
HOH
6
1_555
A
HOH
923
K
HOH
6
1_555
A
HOH
936
K
HOH
6
1_555
A
ALA
141
A
ALA
153
8
1_555
A
GLY
142
A
GLY
154
8
1_555
A
ASN
143
A
ASN
155
8
1_555
A
ILE
145
A
ILE
157
8
1_555
A
SER
146
A
SER
158
8
1_555
A
HOH
585
K
HOH
8
1_555
A
HOH
686
K
HOH
8
1_555
A
HOH
822
K
HOH
8
1_555
A
TRP
101
A
TRP
113
5
1_555
A
HIS
105
A
HIS
117
5
1_555
A
ILE
121
A
ILE
133
5
1_555
A
GLU
124
A
GLU
136
5
1_555
A
HOH
777
K
HOH
5
1_555
95
P 43 2 2