0.008579
0.000000
0.000000
0.000000
0.008316
0.000000
0.000000
0.000000
0.025580
0.00000
0.00000
0.00000
Fairman, J.W.
Dautin, N.
Wojtowicz, D.
Wei, L.
Noinaj, N.
Barnard, T.J.
Udho, E.
Finkelstein, A.
Przytycka, T.M.
Cherezov, V.
Buchanan, S.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
116.565
120.248
39.093
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H40 O4
356.540
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
non-polymer
C21 H40 O4
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
1-Oleoyl-R-glycerol
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
Y
129
N
C
Y
130
N
N
Y
131
N
C
Y
132
N
C
Y
133
N
N
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
S
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
N
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
S
N
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
O
N
243
N
O
N
244
N
C
N
245
S
C
N
246
N
O
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
C
N
281
N
H
N
282
N
C
N
283
N
H
N
284
N
C
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
C
N
290
N
C
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
C
N
296
N
C
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
C
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
C
N
322
R
C
N
323
N
O
N
324
N
O
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
N
395
N
C
N
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
N
412
N
O
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
R
C
N
426
N
O
N
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
N
N
439
S
C
N
440
N
C
N
441
N
O
N
442
N
C
Y
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
N
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
N
452
N
O
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
N
N
466
S
C
N
467
N
C
N
468
N
O
N
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
N
476
N
O
N
477
N
O
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
N
N
490
S
C
N
491
N
C
N
492
N
O
N
493
N
C
N
494
N
C
N
495
N
C
N
496
N
O
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
Z
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
Z
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
Y
432
N
doub
Y
433
N
sing
Y
434
N
sing
N
435
N
sing
Y
436
N
doub
Y
437
N
sing
Y
438
N
sing
N
439
N
sing
Y
440
N
sing
Y
441
N
doub
N
442
N
sing
Y
443
N
doub
N
444
N
sing
Y
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
doub
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
Y
460
N
doub
Y
461
N
sing
Y
462
N
sing
N
463
N
sing
Y
464
N
doub
N
465
N
sing
Y
466
N
doub
N
467
N
sing
Y
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
doub
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
UK
Structure
STRUE6
2005
0969-2126
20
1233
1243
10.1016/j.str.2012.04.011
22658748
Crystal Structures of the Outer Membrane Domain of Intimin and Invasin from Enterohemorrhagic E. coli and Enteropathogenic Y. pseudotuberculosis.
2012
10.2210/pdb4e1s/pdb
pdb_00004e1s
100
1
100
1
K-B pair of biomorph mirrors
CCD
2010-12-17
MARMOSAIC 300 mm CCD
K-B pair of biomorph mirrors
CCD
2011-03-23
MARMOSAIC 300 mm CCD
double crystal Si(111)
SINGLE WAVELENGTH
M
x-ray
1
double crystal Si(111)
MAD
M
x-ray
1
1.034375
1.0
0.98069
1.0
0.95044
1.0
0.98047
1.0
21.07
43035
0.102
1.01
2.740
50.000
12313
88.30
3.50
23-ID-B
APS
1.034375
SYNCHROTRON
APS BEAMLINE 23-ID-B
23-ID-B
APS
0.98069,0.95044,0.98047
SYNCHROTRON
APS BEAMLINE 23-ID-B
27786.594
Intimin
transmembrane domain (UNP residues 208-449)
1
man
polymer
35.453
CHLORIDE ION
1
syn
non-polymer
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
10
syn
non-polymer
356.540
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
3
syn
non-polymer
18.015
water
163
nat
water
Attaching and effacing protein, Eae protein, Gamma-intimin
no
no
QHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKMLAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNT
RLGIGGEYWRDYFKSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVALFNSDKLQ
SNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIEPQYVNELRTLSGSRYDLVQRNNNIILE
YK
QHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKMLAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNT
RLGIGGEYWRDYFKSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVALFNSDKLQ
SNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIEPQYVNELRTLSGSRYDLVQRNNNIILE
YK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
EHEC O157:H7
sample
eae, eaeA, ECs4559, Intimin, L0025, Z5110
83334
Escherichia coli
469008
Escherichia coli
BL21(DE3)
plasmid
pET
1
2.46
50.10
LIPIDIC CUBIC PHASE MONOOLEIN
4.5
0.1 M sodium citrate, pH 4.5-5.5, 0.05-0.1 M sodium chloride, 0.1-0.15 M magnesium chloride, 30-34% PEG400, LIPIDIC CUBIC PHASE MONOOLEIN, temperature 294K
294
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2012-06-13
1
1
2012-07-25
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
invasin beta-domain
RCSB
Y
RCSB
2012-03-07
REL
REL
0.059
1.012
99.60
3.80
0.076
1.021
100.00
3.90
0.070
1.016
100.00
3.90
0.110
1.037
100.00
3.90
0.123
1.015
100.00
3.80
0.168
1.017
99.40
3.60
0.187
0.994
93.20
3.30
0.253
1.004
79.90
2.80
0.254
0.990
61.60
2.60
0.247
0.995
49.20
2.30
CL
CHLORIDE ION
OLC
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
OLB
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
HOH
water
CL
1
2
CL
CL
501
A
OLC
1
3
OLC
OLC
502
A
OLC
2
3
OLC
OLC
503
A
OLC
3
4
OLB
OLB
504
A
OLC
4
3
OLC
OLC
505
A
OLC
506
3
OLC
OLC
506
A
OLC
6
3
OLC
OLC
507
A
OLC
7
4
OLB
OLB
508
A
OLC
8
3
OLC
OLC
509
A
OLC
9
4
OLB
OLB
510
A
OLC
511
3
OLC
OLC
511
A
OLC
11
3
OLC
OLC
512
A
OLC
513
3
OLC
OLC
513
A
OLC
13
3
OLC
OLC
514
A
HOH
3
5
HOH
HOH
601
A
HOH
4
5
HOH
HOH
602
A
HOH
5
5
HOH
HOH
603
A
HOH
6
5
HOH
HOH
604
A
HOH
7
5
HOH
HOH
605
A
HOH
9
5
HOH
HOH
606
A
HOH
10
5
HOH
HOH
607
A
HOH
11
5
HOH
HOH
608
A
HOH
12
5
HOH
HOH
609
A
HOH
13
5
HOH
HOH
610
A
HOH
14
5
HOH
HOH
611
A
HOH
15
5
HOH
HOH
612
A
HOH
16
5
HOH
HOH
613
A
HOH
17
5
HOH
HOH
614
A
HOH
18
5
HOH
HOH
615
A
HOH
19
5
HOH
HOH
616
A
HOH
20
5
HOH
HOH
617
A
HOH
21
5
HOH
HOH
618
A
HOH
22
5
HOH
HOH
619
A
HOH
23
5
HOH
HOH
620
A
HOH
24
5
HOH
HOH
621
A
HOH
25
5
HOH
HOH
622
A
HOH
26
5
HOH
HOH
623
A
HOH
27
5
HOH
HOH
624
A
HOH
28
5
HOH
HOH
625
A
HOH
29
5
HOH
HOH
626
A
HOH
30
5
HOH
HOH
627
A
HOH
31
5
HOH
HOH
628
A
HOH
32
5
HOH
HOH
629
A
HOH
33
5
HOH
HOH
630
A
HOH
34
5
HOH
HOH
631
A
HOH
36
5
HOH
HOH
632
A
HOH
37
5
HOH
HOH
633
A
HOH
38
5
HOH
HOH
634
A
HOH
39
5
HOH
HOH
635
A
HOH
40
5
HOH
HOH
636
A
HOH
41
5
HOH
HOH
637
A
HOH
42
5
HOH
HOH
638
A
HOH
43
5
HOH
HOH
639
A
HOH
44
5
HOH
HOH
640
A
HOH
45
5
HOH
HOH
641
A
HOH
46
5
HOH
HOH
642
A
HOH
47
5
HOH
HOH
643
A
HOH
48
5
HOH
HOH
644
A
HOH
49
5
HOH
HOH
645
A
HOH
50
5
HOH
HOH
646
A
HOH
51
5
HOH
HOH
647
A
HOH
52
5
HOH
HOH
648
A
HOH
54
5
HOH
HOH
649
A
HOH
55
5
HOH
HOH
650
A
HOH
56
5
HOH
HOH
651
A
HOH
57
5
HOH
HOH
652
A
HOH
58
5
HOH
HOH
653
A
HOH
59
5
HOH
HOH
654
A
HOH
60
5
HOH
HOH
655
A
HOH
61
5
HOH
HOH
656
A
HOH
62
5
HOH
HOH
657
A
HOH
63
5
HOH
HOH
658
A
HOH
64
5
HOH
HOH
659
A
HOH
65
5
HOH
HOH
660
A
HOH
66
5
HOH
HOH
661
A
HOH
67
5
HOH
HOH
662
A
HOH
68
5
HOH
HOH
663
A
HOH
69
5
HOH
HOH
664
A
HOH
70
5
HOH
HOH
665
A
HOH
71
5
HOH
HOH
666
A
HOH
72
5
HOH
HOH
667
A
HOH
74
5
HOH
HOH
668
A
HOH
76
5
HOH
HOH
669
A
HOH
77
5
HOH
HOH
670
A
HOH
78
5
HOH
HOH
671
A
HOH
79
5
HOH
HOH
672
A
HOH
80
5
HOH
HOH
673
A
HOH
81
5
HOH
HOH
674
A
HOH
82
5
HOH
HOH
675
A
HOH
83
5
HOH
HOH
676
A
HOH
84
5
HOH
HOH
677
A
HOH
85
5
HOH
HOH
678
A
HOH
86
5
HOH
HOH
679
A
HOH
87
5
HOH
HOH
680
A
HOH
88
5
HOH
HOH
681
A
HOH
89
5
HOH
HOH
682
A
HOH
90
5
HOH
HOH
683
A
HOH
91
5
HOH
HOH
684
A
HOH
92
5
HOH
HOH
685
A
HOH
93
5
HOH
HOH
686
A
HOH
95
5
HOH
HOH
687
A
HOH
96
5
HOH
HOH
688
A
HOH
97
5
HOH
HOH
689
A
HOH
98
5
HOH
HOH
690
A
HOH
99
5
HOH
HOH
691
A
HOH
100
5
HOH
HOH
692
A
HOH
101
5
HOH
HOH
693
A
HOH
102
5
HOH
HOH
694
A
HOH
103
5
HOH
HOH
695
A
HOH
104
5
HOH
HOH
696
A
HOH
105
5
HOH
HOH
697
A
HOH
107
5
HOH
HOH
698
A
HOH
109
5
HOH
HOH
699
A
HOH
110
5
HOH
HOH
700
A
HOH
111
5
HOH
HOH
701
A
HOH
112
5
HOH
HOH
702
A
HOH
113
5
HOH
HOH
703
A
HOH
115
5
HOH
HOH
704
A
HOH
117
5
HOH
HOH
705
A
HOH
118
5
HOH
HOH
706
A
HOH
119
5
HOH
HOH
707
A
HOH
120
5
HOH
HOH
708
A
HOH
122
5
HOH
HOH
709
A
HOH
123
5
HOH
HOH
710
A
HOH
124
5
HOH
HOH
711
A
HOH
125
5
HOH
HOH
712
A
HOH
126
5
HOH
HOH
713
A
HOH
128
5
HOH
HOH
714
A
HOH
130
5
HOH
HOH
715
A
HOH
131
5
HOH
HOH
716
A
HOH
132
5
HOH
HOH
717
A
HOH
134
5
HOH
HOH
718
A
HOH
135
5
HOH
HOH
719
A
HOH
136
5
HOH
HOH
720
A
HOH
137
5
HOH
HOH
721
A
HOH
140
5
HOH
HOH
722
A
HOH
141
5
HOH
HOH
723
A
HOH
142
5
HOH
HOH
724
A
HOH
145
5
HOH
HOH
725
A
HOH
146
5
HOH
HOH
726
A
HOH
147
5
HOH
HOH
727
A
HOH
148
5
HOH
HOH
728
A
HOH
149
5
HOH
HOH
729
A
HOH
150
5
HOH
HOH
730
A
HOH
151
5
HOH
HOH
731
A
HOH
152
5
HOH
HOH
732
A
HOH
153
5
HOH
HOH
733
A
HOH
154
5
HOH
HOH
734
A
HOH
155
5
HOH
HOH
735
A
HOH
156
5
HOH
HOH
736
A
HOH
157
5
HOH
HOH
737
A
HOH
158
5
HOH
HOH
738
A
HOH
159
5
HOH
HOH
739
A
HOH
160
5
HOH
HOH
740
A
HOH
161
5
HOH
HOH
741
A
HOH
162
5
HOH
HOH
742
A
HOH
163
5
HOH
HOH
743
A
HOH
164
5
HOH
HOH
744
A
HOH
165
5
HOH
HOH
745
A
HOH
166
5
HOH
HOH
746
A
HOH
167
5
HOH
HOH
747
A
HOH
168
5
HOH
HOH
748
A
HOH
169
5
HOH
HOH
749
A
HOH
201
5
HOH
HOH
750
A
HOH
203
5
HOH
HOH
751
A
HOH
204
5
HOH
HOH
752
A
HOH
205
5
HOH
HOH
753
A
HOH
206
5
HOH
HOH
754
A
HOH
207
5
HOH
HOH
755
A
HOH
208
5
HOH
HOH
756
A
HOH
209
5
HOH
HOH
757
A
HOH
210
5
HOH
HOH
758
A
HOH
211
5
HOH
HOH
759
A
HOH
212
5
HOH
HOH
760
A
HOH
213
5
HOH
HOH
761
A
HOH
214
5
HOH
HOH
762
A
HOH
215
5
HOH
HOH
763
A
GLN
208
n
1
GLN
208
A
HIS
209
n
2
HIS
209
A
TYR
210
n
3
TYR
210
A
GLY
211
n
4
GLY
211
A
THR
212
n
5
THR
212
A
ALA
213
n
6
ALA
213
A
GLU
214
n
7
GLU
214
A
VAL
215
n
8
VAL
215
A
ASN
216
n
9
ASN
216
A
LEU
217
n
10
LEU
217
A
GLN
218
n
11
GLN
218
A
SER
219
n
12
SER
219
A
GLY
220
n
13
GLY
220
A
ASN
221
n
14
ASN
221
A
ASN
222
n
15
ASN
222
A
PHE
223
n
16
PHE
223
A
ASP
224
n
17
ASP
224
A
GLY
225
n
18
GLY
225
A
SER
226
n
19
SER
226
A
SER
227
n
20
SER
227
A
LEU
228
n
21
LEU
228
A
ASP
229
n
22
ASP
229
A
PHE
230
n
23
PHE
230
A
LEU
231
n
24
LEU
231
A
LEU
232
n
25
LEU
232
A
PRO
233
n
26
PRO
233
A
PHE
234
n
27
PHE
234
A
TYR
235
n
28
TYR
235
A
ASP
236
n
29
ASP
236
A
SER
237
n
30
SER
237
A
GLU
238
n
31
GLU
238
A
LYS
239
n
32
LYS
239
A
MET
240
n
33
MET
240
A
LEU
241
n
34
LEU
241
A
ALA
242
n
35
ALA
242
A
PHE
243
n
36
PHE
243
A
GLY
244
n
37
GLY
244
A
GLN
245
n
38
GLN
245
A
VAL
246
n
39
VAL
246
A
GLY
247
n
40
GLY
247
A
ALA
248
n
41
ALA
248
A
ARG
249
n
42
ARG
249
A
TYR
250
n
43
TYR
250
A
ILE
251
n
44
ILE
251
A
ASP
252
n
45
ASP
252
A
SER
253
n
46
SER
253
A
ARG
254
n
47
ARG
254
A
PHE
255
n
48
PHE
255
A
THR
256
n
49
THR
256
A
ALA
257
n
50
ALA
257
A
ASN
258
n
51
ASN
258
A
LEU
259
n
52
LEU
259
A
GLY
260
n
53
GLY
260
A
ALA
261
n
54
ALA
261
A
GLY
262
n
55
GLY
262
A
GLN
263
n
56
GLN
263
A
ARG
264
n
57
ARG
264
A
PHE
265
n
58
PHE
265
A
PHE
266
n
59
PHE
266
A
LEU
267
n
60
LEU
267
A
PRO
268
n
61
PRO
268
A
ALA
269
n
62
ALA
269
A
ASN
270
n
63
ASN
270
A
MET
271
n
64
MET
271
A
LEU
272
n
65
LEU
272
A
GLY
273
n
66
GLY
273
A
TYR
274
n
67
TYR
274
A
ASN
275
n
68
ASN
275
A
VAL
276
n
69
VAL
276
A
PHE
277
n
70
PHE
277
A
ILE
278
n
71
ILE
278
A
ASP
279
n
72
ASP
279
A
GLN
280
n
73
GLN
280
A
ASP
281
n
74
ASP
281
A
PHE
282
n
75
PHE
282
A
SER
283
n
76
SER
283
A
GLY
284
n
77
GLY
284
A
ASP
285
n
78
ASP
285
A
ASN
286
n
79
ASN
286
A
THR
287
n
80
THR
287
A
ARG
288
n
81
ARG
288
A
LEU
289
n
82
LEU
289
A
GLY
290
n
83
GLY
290
A
ILE
291
n
84
ILE
291
A
GLY
292
n
85
GLY
292
A
GLY
293
n
86
GLY
293
A
GLU
294
n
87
GLU
294
A
TYR
295
n
88
TYR
295
A
TRP
296
n
89
TRP
296
A
ARG
297
n
90
ARG
297
A
ASP
298
n
91
ASP
298
A
TYR
299
n
92
TYR
299
A
PHE
300
n
93
PHE
300
A
LYS
301
n
94
LYS
301
A
SER
302
n
95
SER
302
A
SER
303
n
96
SER
303
A
VAL
304
n
97
VAL
304
A
ASN
305
n
98
ASN
305
A
GLY
306
n
99
GLY
306
A
TYR
307
n
100
TYR
307
A
PHE
308
n
101
PHE
308
A
ARG
309
n
102
ARG
309
A
MET
310
n
103
MET
310
A
SER
311
n
104
SER
311
A
GLY
312
n
105
GLY
312
A
TRP
313
n
106
TRP
313
A
HIS
314
n
107
HIS
314
A
GLU
315
n
108
GLU
315
A
SER
316
n
109
SER
316
A
TYR
317
n
110
TYR
317
A
ASN
318
n
111
ASN
318
A
LYS
319
n
112
LYS
319
A
LYS
320
n
113
LYS
320
A
ASP
321
n
114
ASP
321
A
TYR
322
n
115
TYR
322
A
ASP
323
n
116
ASP
323
A
GLU
324
n
117
GLU
324
A
ARG
325
n
118
ARG
325
A
PRO
326
n
119
PRO
326
A
ALA
327
n
120
ALA
327
A
ASN
328
n
121
ASN
328
A
GLY
329
n
122
GLY
329
A
PHE
330
n
123
PHE
330
A
ASP
331
n
124
ASP
331
A
ILE
332
n
125
ILE
332
A
ARG
333
n
126
ARG
333
A
PHE
334
n
127
PHE
334
A
ASN
335
n
128
ASN
335
A
GLY
336
n
129
GLY
336
A
TYR
337
n
130
TYR
337
A
LEU
338
n
131
LEU
338
A
PRO
339
n
132
PRO
339
A
SER
340
n
133
SER
340
A
TYR
341
n
134
TYR
341
A
PRO
342
n
135
PRO
342
A
ALA
343
n
136
ALA
343
A
LEU
344
n
137
LEU
344
A
GLY
345
n
138
GLY
345
A
ALA
346
n
139
ALA
346
A
LYS
347
n
140
LYS
347
A
LEU
348
n
141
LEU
348
A
ILE
349
n
142
ILE
349
A
TYR
350
n
143
TYR
350
A
GLU
351
n
144
GLU
351
A
GLN
352
n
145
GLN
352
A
TYR
353
n
146
TYR
353
A
TYR
354
n
147
TYR
354
A
GLY
355
n
148
GLY
355
A
ASP
356
n
149
ASP
356
A
ASN
357
n
150
ASN
357
A
VAL
358
n
151
VAL
358
A
ALA
359
n
152
ALA
359
A
LEU
360
n
153
LEU
360
A
PHE
361
n
154
PHE
361
A
ASN
362
n
155
ASN
362
A
SER
363
n
156
SER
363
A
ASP
364
n
157
ASP
364
A
LYS
365
n
158
LYS
365
A
LEU
366
n
159
LEU
366
A
GLN
367
n
160
GLN
367
A
SER
368
n
161
SER
368
A
ASN
369
n
162
ASN
369
A
PRO
370
n
163
PRO
370
A
GLY
371
n
164
GLY
371
A
ALA
372
n
165
ALA
372
A
ALA
373
n
166
ALA
373
A
THR
374
n
167
THR
374
A
VAL
375
n
168
VAL
375
A
GLY
376
n
169
GLY
376
A
VAL
377
n
170
VAL
377
A
ASN
378
n
171
ASN
378
A
TYR
379
n
172
TYR
379
A
THR
380
n
173
THR
380
A
PRO
381
n
174
PRO
381
A
ILE
382
n
175
ILE
382
A
PRO
383
n
176
PRO
383
A
LEU
384
n
177
LEU
384
A
VAL
385
n
178
VAL
385
A
THR
386
n
179
THR
386
A
MET
387
n
180
MET
387
A
GLY
388
n
181
GLY
388
A
ILE
389
n
182
ILE
389
A
ASP
390
n
183
ASP
390
A
TYR
391
n
184
TYR
391
A
ARG
392
n
185
ARG
392
A
HIS
393
n
186
HIS
393
A
GLY
394
n
187
GLY
394
A
THR
395
n
188
THR
395
A
GLY
396
n
189
GLY
396
A
ASN
397
n
190
ASN
397
A
GLU
398
n
191
GLU
398
A
ASN
399
n
192
ASN
399
A
ASP
400
n
193
ASP
400
A
LEU
401
n
194
LEU
401
A
LEU
402
n
195
LEU
402
A
TYR
403
n
196
TYR
403
A
SER
404
n
197
SER
404
A
MET
405
n
198
MET
405
A
GLN
406
n
199
GLN
406
A
PHE
407
n
200
PHE
407
A
ARG
408
n
201
ARG
408
A
TYR
409
n
202
TYR
409
A
GLN
410
n
203
GLN
410
A
PHE
411
n
204
PHE
411
A
ASP
412
n
205
ASP
412
A
LYS
413
n
206
LYS
413
A
SER
414
n
207
SER
414
A
TRP
415
n
208
TRP
415
A
SER
416
n
209
SER
416
A
GLN
417
n
210
GLN
417
A
GLN
418
n
211
GLN
418
A
ILE
419
n
212
ILE
419
A
GLU
420
n
213
GLU
420
A
PRO
421
n
214
PRO
421
A
GLN
422
n
215
GLN
422
A
TYR
423
n
216
TYR
423
A
VAL
424
n
217
VAL
424
A
ASN
425
n
218
ASN
425
A
GLU
426
n
219
GLU
426
A
LEU
427
n
220
LEU
427
A
ARG
428
n
221
ARG
428
A
THR
429
n
222
THR
429
A
LEU
430
n
223
LEU
430
A
SER
431
n
224
SER
431
A
GLY
432
n
225
GLY
432
A
SER
433
n
226
SER
433
A
ARG
434
n
227
ARG
434
A
TYR
435
n
228
TYR
435
A
ASP
436
n
229
ASP
436
A
LEU
437
n
230
LEU
437
A
VAL
438
n
231
VAL
438
A
GLN
439
n
232
GLN
439
A
ARG
440
n
233
ARG
440
A
ASN
441
n
234
ASN
441
A
ASN
442
n
235
ASN
442
A
ASN
443
n
236
ASN
443
A
ILE
444
n
237
ILE
444
A
ILE
445
n
238
ILE
445
A
LEU
446
n
239
LEU
446
A
GLU
447
n
240
GLU
447
A
TYR
448
n
241
TYR
448
A
LYS
449
n
242
LYS
449
A
6.3557
1.9661
-3.6271
3.4590
-0.9689
7.0189
0.4423
0.0372
1.0855
-0.1291
0.4006
0.2260
-0.7461
-0.5875
-0.1906
-0.1804
0.2358
0.0989
-0.0887
-0.0443
0.0777
refined
-27.3712
-24.2683
5.8998
X-RAY DIFFRACTION
3.1351
1.7272
-1.3196
2.7507
-0.4060
2.6904
0.2825
0.1637
0.3816
0.2007
-0.0630
0.1785
-0.3442
-0.0862
-0.1592
0.1941
-0.0070
0.0010
0.0986
0.0150
0.1802
refined
-23.6948
-18.8085
0.0867
X-RAY DIFFRACTION
2.3077
0.6603
0.0547
3.0318
0.2117
2.3036
-0.2528
0.0508
0.1593
0.1666
0.0897
0.4079
-0.3294
-0.5608
-0.0208
0.0852
-0.0937
0.0233
-0.0739
0.0001
0.0777
refined
-28.9867
-18.1283
-0.2706
X-RAY DIFFRACTION
2.8773
1.6342
-0.9097
2.4121
-0.5659
0.8935
0.7125
-0.0169
-0.3678
0.5403
-0.4711
-0.3325
-0.3484
-0.0368
-0.1013
0.2023
-0.1316
-0.0321
0.0329
0.0258
0.1025
refined
-26.8451
-13.3400
-0.1963
X-RAY DIFFRACTION
3.2247
1.6108
0.0434
1.7381
0.3029
1.7545
0.0792
-0.0341
0.0099
0.1819
-0.0388
-0.0877
-0.2629
0.0446
-0.0292
0.2484
-0.0057
0.0198
0.1214
0.0120
0.1322
refined
-29.6932
-10.9298
-0.9417
X-RAY DIFFRACTION
4.7105
0.7704
1.2491
1.8323
-0.0479
1.8260
-0.0019
0.1377
0.5524
0.3483
-0.1406
0.1440
-0.3220
0.1324
0.1277
0.2260
-0.0183
-0.0004
0.0545
-0.0032
0.0985
refined
-29.8936
-8.9017
2.9728
X-RAY DIFFRACTION
1.4833
-0.4826
1.0345
1.2711
-0.5777
2.6781
-0.3441
0.1369
0.1230
0.1711
0.1396
0.1501
-0.6371
-0.0472
0.1080
0.1497
-0.0097
0.0770
0.0465
0.0004
0.0936
refined
-37.7216
-9.9874
2.7168
X-RAY DIFFRACTION
1.0194
-0.7919
0.9039
2.0625
-0.9771
3.4574
0.0912
-0.3187
0.0134
0.1607
0.0210
0.2429
-0.4022
-0.3380
0.0225
0.0930
-0.0705
0.0597
0.0551
0.0261
0.1169
refined
-39.6120
-11.5520
8.0790
X-RAY DIFFRACTION
4.1957
-1.3399
1.1444
0.7058
-0.1422
1.2998
-0.0730
-0.4379
0.0443
0.1338
0.1372
0.0014
-0.3986
-0.1135
-0.0575
0.3123
-0.0523
0.0444
0.1577
0.0195
0.1140
refined
-36.6172
-10.3716
13.9218
X-RAY DIFFRACTION
1.3027
-0.9829
-0.0022
1.4642
0.1838
1.3871
0.1051
-0.0805
0.0386
0.3446
-0.1632
0.1074
-0.1809
-0.1561
0.0083
0.3073
-0.0568
0.0750
0.1745
0.0079
0.1511
refined
-38.3661
-15.7783
15.6031
X-RAY DIFFRACTION
3.0446
-1.7712
-0.5406
1.6672
-0.2896
2.9610
-0.0044
-0.6588
-0.1363
0.0446
0.1351
0.0641
-0.2431
-0.0426
-0.1631
0.1446
-0.0915
0.0055
0.1334
-0.0077
0.1232
refined
-34.1110
-19.0035
17.9400
X-RAY DIFFRACTION
2.9400
-0.8432
-1.1829
2.1959
0.6591
2.9367
0.0098
-0.0922
0.1558
0.3932
0.0064
0.0152
0.1007
-0.2982
0.0633
0.2207
-0.0519
-0.0332
0.1808
0.0363
0.1572
refined
-32.1108
-22.0836
13.3658
X-RAY DIFFRACTION
0.2216
-1.0962
0.0242
5.7472
0.7262
1.5422
0.3203
-0.0623
0.0663
-0.0270
-0.3162
-1.1543
-0.0634
0.4743
0.0399
0.2124
-0.0698
-0.0399
0.2602
0.0715
0.2769
refined
-12.8609
-22.8144
11.2677
X-RAY DIFFRACTION
9.4640
0.4187
0.0813
0.4737
-0.0323
1.6298
0.3073
-0.3799
-0.1528
0.1586
-0.1250
-0.0045
-0.0771
-0.0262
-0.1800
0.2509
-0.0521
0.0224
0.0935
0.0216
0.1518
refined
-36.6912
-13.7446
3.7126
X-RAY DIFFRACTION
A
0
A
0
X-RAY DIFFRACTION
1
chain 'A' and ((resseq 208:222))
A
0
A
0
X-RAY DIFFRACTION
2
chain 'A' and ((resseq 223:238))
A
0
A
0
X-RAY DIFFRACTION
3
chain 'A' and ((resseq 239:252))
A
0
A
0
X-RAY DIFFRACTION
4
chain 'A' and ((resseq 253:268))
A
0
A
0
X-RAY DIFFRACTION
5
chain 'A' and ((resseq 269:283))
A
0
A
0
X-RAY DIFFRACTION
6
chain 'A' and ((resseq 284:298))
A
0
A
0
X-RAY DIFFRACTION
7
chain 'A' and ((resseq 299:317))
A
0
A
0
X-RAY DIFFRACTION
8
chain 'A' and ((resseq 318:340))
A
0
A
0
X-RAY DIFFRACTION
9
chain 'A' and ((resseq 341:360))
A
0
A
0
X-RAY DIFFRACTION
10
chain 'A' and ((resseq 361:383))
A
0
A
0
X-RAY DIFFRACTION
11
chain 'A' and ((resseq 384:395))
A
0
A
0
X-RAY DIFFRACTION
12
chain 'A' and ((resseq 396:411))
A
0
A
0
X-RAY DIFFRACTION
13
chain 'A' and ((resseq 412:434))
A
0
A
0
X-RAY DIFFRACTION
14
chain 'A' and ((resseq 435:449))
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
214
A
N
GLU
7
A
O
ASP
229
A
O
ASP
22
A
N
LEU
232
A
N
LEU
25
A
O
GLY
244
A
O
GLY
37
A
N
GLN
245
A
N
GLN
38
A
O
GLY
260
A
O
GLY
53
A
N
PHE
265
A
N
PHE
58
A
O
LEU
272
A
O
LEU
65
A
N
PHE
277
A
N
PHE
70
A
O
GLY
290
A
O
GLY
83
A
N
LEU
289
A
N
LEU
82
A
O
PHE
308
A
O
PHE
101
A
N
SER
303
A
N
SER
96
A
O
ARG
333
A
O
ARG
126
A
N
PHE
334
A
N
PHE
127
A
O
LEU
348
A
O
LEU
141
A
N
ILE
349
A
N
ILE
142
A
O
THR
374
A
O
THR
167
A
N
TYR
379
A
N
TYR
172
A
O
MET
387
A
O
MET
180
A
N
GLY
394
A
N
GLY
187
A
O
GLU
398
A
O
GLU
191
A
O
TYR
403
A
O
TYR
196
A
N
SER
219
A
N
SER
12
A
N
HIS
314
A
N
HIS
107
A
O
GLU
324
A
O
GLU
117
A
N
ARG
325
A
N
ARG
118
A
O
GLU
447
A
O
GLU
240
1
A
OLC
503
D
OLC
1
A
HOH
679
P
HOH
1
A
HOH
737
P
HOH
1
A
CD
LYS
239
A
CD
LYS
32
1
Y
1
A
CE
LYS
239
A
CE
LYS
32
1
Y
1
A
NZ
LYS
239
A
NZ
LYS
32
1
Y
1
A
CG
LYS
320
A
CG
LYS
113
1
Y
1
A
CD
LYS
320
A
CD
LYS
113
1
Y
1
A
CE
LYS
320
A
CE
LYS
113
1
Y
1
A
NZ
LYS
320
A
NZ
LYS
113
1
Y
1
A
C18
OLC
505
F
C18
OLC
1
1
N
1
A
C17
OLC
505
F
C17
OLC
1
1
N
1
A
C16
OLC
505
F
C16
OLC
1
1
N
1
A
C15
OLC
505
F
C15
OLC
1
1
N
1
A
C13
OLC
505
F
C13
OLC
1
1
N
1
A
C14
OLC
505
F
C14
OLC
1
1
N
1
A
C18
OLC
513
N
C18
OLC
1
1
N
1
A
C17
OLC
513
N
C17
OLC
1
1
N
1
A
C16
OLC
513
N
C16
OLC
1
1
N
1
A
C12
OLC
513
N
C12
OLC
1
1
N
1
A
C15
OLC
513
N
C15
OLC
1
1
N
1
A
C13
OLC
513
N
C13
OLC
1
1
N
1
A
C14
OLC
513
N
C14
OLC
1
1
N
1
A
A
O
O
HOH
HOH
710
716
1.97
1
A
A
O25
O
OLC
HOH
514
759
2.05
1
A
A
ND2
O
ASN
HOH
357
742
2.07
1
A
A
O
O
HOH
HOH
607
758
2.10
1
A
A
O
O
HOH
HOH
715
716
2.11
1
A
A
C18
C17
OLC
OLC
503
503
1.52
1_555
4_555
1
A
ASN
221
175.17
-130.96
1
A
PHE
223
-102.77
47.54
1
A
ASP
321
82.70
8.58
1
A
TYR
341
-150.27
74.50
112.630
32.0012
12.020
22.9519
-0.0000
-0.0000
-0.0277
-0.0000
-3.9726
0.2330
0.1750
0.1779
0.1779
1.855
27.899
1152
23801
22197
5.19
93.26
1.000
0.270
0.8040
0.4800
RANDOM
1,2
0.0
MAD, MOLECULAR REPLACEMENT
25.6400
0.7200
1.0000
ML
FLAT BULK SOLVENT MODEL
61.2480
0.3730
1.855
27.899
163
2436
313
0
1960
0.006
2365
1.143
3119
0.080
291
0.004
404
25.568
985
0.3638
0.2777
1.9394
112
1956
2068
8
71.0000
0.2870
0.2399
2.0416
128
2472
2600
8
88.0000
0.2494
0.1987
2.1695
146
2664
2810
8
96.0000
0.2442
0.1853
2.3369
162
2748
2910
8
99.0000
0.2307
0.1737
2.5720
143
2801
2944
8
100.0000
0.2387
0.1665
2.9438
174
2775
2949
8
100.0000
0.1980
0.1389
3.7075
159
2842
3001
8
100.0000
0.2218
0.1740
27.9017
128
2787
2915
8
93.0000
1.850
50.0
4E1S
23801
22224
1.85
1.85
0.088
1.518
1,2
8.5
5.1
93.6
0.578
1.850
1.920
1648
1.017
1,2
3.9
71.5
0.480
1.920
1.990
1985
1.036
1,2
4.2
85.0
0.398
1.990
2.080
2197
1.095
1,2
4.5
93.1
0.297
2.080
2.190
2284
1.111
1,2
4.8
97.2
0.248
2.190
2.330
2311
1.192
1,2
5.2
98.9
0.197
2.330
2.510
2348
1.316
1,2
5.5
99.7
0.141
2.510
2.760
2362
1.391
1,2
5.7
99.6
0.091
2.760
3.160
2386
1.551
1,2
5.7
99.7
0.060
3.160
3.990
2410
2.480
1,2
5.5
99.9
0.043
3.990
50.000
2293
2.381
1,2
5.0
90.6
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
phasing
Eric de La Fortelle
sharp-develop@globalphasing.com
http://www.globalphasing.com/sharp/
SHARP
package
phasing
Jan P. Abrahams
ccp4@ccp4.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/solomon.html
SOLOMON
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.1_743
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
Blu-Ice
data reduction
HKL-2000
X-ray crystal structure of the transmembrane beta-domain from intimin from EHEC strain O157:H7
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
3
N
N
3
N
N
4
N
N
3
N
N
4
N
N
3
N
N
3
N
N
3
N
N
3
N
N
5
N
N
A
SER
414
A
SER
207
HELX_P
A
ILE
419
A
ILE
212
1
1
6
A
GLN
422
A
GLN
215
HELX_P
A
THR
429
A
THR
222
1
2
8
CELL ADHESION
outer membrane beta barrel, adhesin, translocated intimin receptor, CELL ADHESION
EAE_ECO57
UNP
1
208
P43261
QHYGTAEVNLQSGNNFDGSSLDFLLPFYDSEKMLAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQDFSGDNT
RLGIGGEYWRDYFKSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPSYPALGAKLIYEQYYGDNVALFNSDKLQ
SNPGAATVGVNYTPIPLVTMGIDYRHGTGNENDLLYSMQFRYQFDKSWSQQIEPQYVNELRTLSGSRYDLVQRNNNIILE
YK
208
449
4E1S
208
449
P43261
A
1
1
242
13
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
212
A
THR
5
A
SER
219
A
SER
12
A
GLY
225
A
GLY
18
A
ASP
236
A
ASP
29
A
MET
240
A
MET
33
A
ILE
251
A
ILE
44
A
ARG
254
A
ARG
47
A
PHE
266
A
PHE
59
A
MET
271
A
MET
64
A
ASP
281
A
ASP
74
A
ASN
286
A
ASN
79
A
ARG
297
A
ARG
90
A
PHE
300
A
PHE
93
A
ARG
309
A
ARG
102
A
GLY
329
A
GLY
122
A
LEU
338
A
LEU
131
A
TYR
341
A
TYR
134
A
TYR
353
A
TYR
146
A
GLY
371
A
GLY
164
A
ILE
382
A
ILE
175
A
VAL
385
A
VAL
178
A
GLY
394
A
GLY
187
A
GLU
398
A
GLU
191
A
GLN
410
A
GLN
203
A
THR
212
A
THR
5
A
SER
219
A
SER
12
A
HIS
314
A
HIS
107
A
GLU
315
A
GLU
108
A
ASP
323
A
ASP
116
A
PRO
326
A
PRO
119
A
LEU
446
A
LEU
239
A
TYR
448
A
TYR
241
BINDING SITE FOR RESIDUE CL A 501
A
CL
501
Software
2
BINDING SITE FOR RESIDUE OLC A 502
A
OLC
502
Software
10
BINDING SITE FOR RESIDUE OLC A 503
A
OLC
503
Software
9
BINDING SITE FOR RESIDUE OLB A 504
A
OLB
504
Software
7
BINDING SITE FOR RESIDUE OLC A 505
A
OLC
505
Software
9
BINDING SITE FOR RESIDUE OLC A 506
A
OLC
506
Software
8
BINDING SITE FOR RESIDUE OLC A 507
A
OLC
507
Software
10
BINDING SITE FOR RESIDUE OLB A 508
A
OLB
508
Software
7
BINDING SITE FOR RESIDUE OLC A 509
A
OLC
509
Software
10
BINDING SITE FOR RESIDUE OLB A 510
A
OLB
510
Software
7
BINDING SITE FOR RESIDUE OLC A 511
A
OLC
511
Software
12
BINDING SITE FOR RESIDUE OLC A 512
A
OLC
512
Software
5
BINDING SITE FOR RESIDUE OLC A 513
A
OLC
513
Software
10
BINDING SITE FOR RESIDUE OLC A 514
A
OLC
514
Software
7
A
ARG
333
A
ARG
126
2
1_555
A
ASN
335
A
ASN
128
2
1_555
A
GLN
218
A
GLN
11
10
1_555
A
SER
219
A
SER
12
10
1_555
A
GLY
225
A
GLY
18
10
1_555
A
SER
226
A
SER
19
10
1_555
A
TYR
250
A
TYR
43
10
1_555
A
VAL
377
A
VAL
170
10
1_555
A
TYR
379
A
TYR
172
10
6_444
A
ILE
389
A
ILE
182
10
1_555
A
OLC
505
F
OLC
10
1_555
A
OLC
514
O
OLC
10
6_445
A
GLY
273
A
GLY
66
9
1_555
A
GLY
292
A
GLY
85
9
1_555
A
GLY
293
A
GLY
86
9
1_555
A
VAL
304
A
VAL
97
9
1_555
A
ARG
309
A
ARG
102
9
4_555
A
ASN
328
A
ASN
121
9
4_555
A
TYR
354
A
TYR
147
9
1_555
A
OLC
509
J
OLC
9
1_555
A
HOH
727
P
HOH
9
1_555
A
TYR
235
A
TYR
28
7
1_555
A
GLN
263
A
GLN
56
7
1_555
A
TYR
274
A
TYR
67
7
1_555
A
OLC
506
G
OLC
7
1_555
A
OLC
509
J
OLC
7
4_555
A
OLC
511
L
OLC
7
1_555
A
OLC
513
N
OLC
7
1_555
A
VAL
215
A
VAL
8
9
1_555
A
SER
226
A
SER
19
9
1_555
A
ALA
248
A
ALA
41
9
1_555
A
TYR
379
A
TYR
172
9
6_444
A
MET
387
A
MET
180
9
6_444
A
OLC
502
C
OLC
9
1_555
A
OLB
508
I
OLB
9
1_555
A
OLC
512
M
OLC
9
6_445
A
OLC
514
O
OLC
9
1_555
A
PHE
234
A
PHE
27
8
1_555
A
TYR
235
A
TYR
28
8
1_555
A
LEU
338
A
LEU
131
8
1_554
A
PRO
339
A
PRO
132
8
1_554
A
SER
340
A
SER
133
8
1_554
A
OLB
504
E
OLB
8
1_555
A
OLC
511
L
OLC
8
1_555
A
OLC
513
N
OLC
8
1_555
A
ARG
297
A
ARG
90
10
1_555
A
ASP
298
A
ASP
91
10
1_555
A
TYR
299
A
TYR
92
10
1_555
A
TYR
337
A
TYR
130
10
1_555
A
LEU
338
A
LEU
131
10
1_555
A
LEU
344
A
LEU
137
10
1_555
A
ALA
346
A
ALA
139
10
1_555
A
VAL
377
A
VAL
170
10
1_555
A
OLC
512
M
OLC
10
1_556
A
HOH
753
P
HOH
10
1_555
A
SER
219
A
SER
12
7
6_444
A
GLY
220
A
GLY
13
7
6_444
A
ASN
221
A
ASN
14
7
6_444
A
TYR
403
A
TYR
196
7
6_444
A
TYR
409
A
TYR
202
7
1_555
A
OLC
505
F
OLC
7
1_555
A
HOH
759
P
HOH
7
1_555
A
ARG
309
A
ARG
102
10
4_555
A
MET
310
A
MET
103
10
4_555
A
GLY
312
A
GLY
105
10
4_555
A
TRP
313
A
TRP
106
10
4_555
A
ARG
325
A
ARG
118
10
4_555
A
PHE
330
A
PHE
123
10
1_555
A
TYR
354
A
TYR
147
10
1_555
A
OLC
503
D
OLC
10
1_555
A
OLB
504
E
OLB
10
4_555
A
OLB
510
K
OLB
10
1_555
A
VAL
304
A
VAL
97
7
1_555
A
PHE
330
A
PHE
123
7
1_555
A
ILE
332
A
ILE
125
7
1_555
A
GLN
352
A
GLN
145
7
1_555
A
TYR
354
A
TYR
147
7
1_555
A
ASN
369
A
ASN
162
7
1_555
A
OLC
509
J
OLC
7
1_555
A
LEU
232
A
LEU
25
12
1_555
A
PRO
233
A
PRO
26
12
1_555
A
PHE
234
A
PHE
27
12
1_555
A
GLY
244
A
GLY
37
12
1_555
A
ALA
261
A
ALA
54
12
1_555
A
ILE
278
A
ILE
71
12
1_555
A
SER
340
A
SER
133
12
1_554
A
TYR
341
A
TYR
134
12
1_554
A
LEU
344
A
LEU
137
12
1_554
A
OLB
504
E
OLB
12
1_555
A
OLC
506
G
OLC
12
1_555
A
HOH
698
P
HOH
12
1_555
A
TYR
341
A
TYR
134
5
1_554
A
VAL
377
A
VAL
170
5
1_554
A
OLC
505
F
OLC
5
6_444
A
OLC
507
H
OLC
5
1_554
A
OLC
514
O
OLC
5
1_555
A
TYR
235
A
TYR
28
10
1_555
A
SER
237
A
SER
30
10
1_555
A
MET
240
A
MET
33
10
1_555
A
GLN
263
A
GLN
56
10
1_555
A
LEU
267
A
LEU
60
10
4_555
A
LEU
272
A
LEU
65
10
4_555
A
TYR
274
A
TYR
67
10
1_555
A
OLB
504
E
OLB
10
1_555
A
OLC
506
G
OLC
10
1_555
A
HOH
730
P
HOH
10
4_555
A
HIS
209
A
HIS
2
7
1_555
A
PHE
230
A
PHE
23
7
1_555
A
ALA
257
A
ALA
50
7
1_555
A
OLC
502
C
OLC
7
6_444
A
OLC
505
F
OLC
7
1_555
A
OLC
512
M
OLC
7
1_555
A
HOH
759
P
HOH
7
1_555
20
C 2 2 21