0.014598 0.000000 0.000000 -0.000000 0.014596 0.000000 0.000000 -0.000000 0.012274 0.000000 0.000000 0.000000 Rudzka, K. Amzel, L.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 68.503 68.513 81.472 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cu 2 63.546 COPPER (II) ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Ni 2 58.693 NICKEL (II) ION non-polymer H2 O2 34.015 HYDROGEN PEROXIDE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking GW J.Biol.Inorg.Chem. JJBCFA 2154 0949-8257 18 223 232 10.1007/s00775-012-0967-z 23247335 Coordination of peroxide to the Cu(M) center of peptidylglycine alpha-hydroxylating monooxygenase (PHM): structural and computational study. 2013 100 1 CCD 2011-04-21 ADSC QUANTUM 210 SINGLE WAVELENGTH M x-ray 1 0.979 1.0 X6A NSLS 0.979 SYNCHROTRON NSLS BEAMLINE X6A 34773.883 Peptidyl-glycine alpha-amidating monooxygenase 1.14.17.3 UNP residues 45-356 1 man polymer 63.546 COPPER (II) ION 2 syn non-polymer 58.693 NICKEL (II) ION 1 syn non-polymer 34.015 HYDROGEN PEROXIDE 1 syn non-polymer 92.094 GLYCEROL 4 syn non-polymer 18.015 water 149 nat water PAM, Peptidylglycine alpha-hydroxylating monooxygenase, PHM, Peptidyl-alpha-hydroxyglycine alpha-amidating lyase, Peptidylamidoglycolate lyase, PAL no no NECLGTIGPVTPLDASDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYW FCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGM YLMMSVDTVIPPGEKVVNADISCQYKMYPMHVFAYRVHTHHLGKVVSGYRVRNGQWTLIGRQNPQLPQAFYPVEHPVDVT FGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKYALSFMTCTKNVAPDMFRTIPAEANIPIPV NECLGTIGPVTPLDASDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYW FCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGM YLMMSVDTVIPPGEKVVNADISCQYKMYPMHVFAYRVHTHHLGKVVSGYRVRNGQWTLIGRQNPQLPQAFYPVEHPVDVT FGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKYALSFMTCTKNVAPDMFRTIPAEANIPIPV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n brown rat,rat,rats sample Pam 10116 Rattus norvegicus 10029 Cricetulus griseus 1 2.75 55.26 VAPOR DIFFUSION, HANGING DROP 5.5 pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 software repository Initial release Database references Refinement description 1 0 2013-01-23 1 1 2013-07-03 1 2 2017-11-15 RCSB Y RCSB 2012-03-13 REL REL CU COPPER (II) ION NI NICKEL (II) ION PEO HYDROGEN PEROXIDE GOL GLYCEROL HOH water CU 357 2 CU CU 401 A CU 358 2 CU CU 402 A NI 359 3 NI NI 403 A PEO 1 4 PEO PEO 404 A GOL 1 5 GOL GOL 405 A GOL 2 5 GOL GOL 406 A GOL 3 5 GOL GOL 407 A GOL 5 5 GOL GOL 408 A HOH 1 6 HOH HOH 501 A HOH 2 6 HOH HOH 502 A HOH 3 6 HOH HOH 503 A HOH 4 6 HOH HOH 504 A HOH 5 6 HOH HOH 505 A HOH 6 6 HOH HOH 506 A HOH 7 6 HOH HOH 507 A HOH 8 6 HOH HOH 508 A HOH 9 6 HOH HOH 509 A HOH 10 6 HOH HOH 510 A HOH 11 6 HOH HOH 511 A HOH 12 6 HOH HOH 512 A HOH 13 6 HOH HOH 513 A HOH 14 6 HOH HOH 514 A HOH 15 6 HOH HOH 515 A HOH 16 6 HOH HOH 516 A HOH 18 6 HOH HOH 517 A HOH 19 6 HOH HOH 518 A HOH 20 6 HOH HOH 519 A HOH 21 6 HOH HOH 520 A HOH 24 6 HOH HOH 521 A HOH 25 6 HOH HOH 522 A HOH 26 6 HOH HOH 523 A HOH 27 6 HOH HOH 524 A HOH 30 6 HOH HOH 525 A HOH 31 6 HOH HOH 526 A HOH 32 6 HOH HOH 527 A HOH 33 6 HOH HOH 528 A HOH 34 6 HOH HOH 529 A HOH 36 6 HOH HOH 530 A HOH 37 6 HOH HOH 531 A HOH 38 6 HOH HOH 532 A HOH 40 6 HOH HOH 533 A HOH 42 6 HOH HOH 534 A HOH 43 6 HOH HOH 535 A HOH 44 6 HOH HOH 536 A HOH 45 6 HOH HOH 537 A HOH 46 6 HOH HOH 538 A HOH 47 6 HOH HOH 539 A HOH 48 6 HOH HOH 540 A HOH 49 6 HOH HOH 541 A HOH 53 6 HOH HOH 542 A HOH 54 6 HOH HOH 543 A HOH 56 6 HOH HOH 544 A HOH 57 6 HOH HOH 545 A HOH 59 6 HOH HOH 546 A HOH 60 6 HOH HOH 547 A HOH 61 6 HOH HOH 548 A HOH 62 6 HOH HOH 549 A HOH 63 6 HOH HOH 550 A HOH 64 6 HOH HOH 551 A HOH 72 6 HOH HOH 552 A HOH 75 6 HOH HOH 553 A HOH 77 6 HOH HOH 554 A HOH 78 6 HOH HOH 555 A HOH 79 6 HOH HOH 556 A HOH 81 6 HOH HOH 557 A HOH 84 6 HOH HOH 558 A HOH 85 6 HOH HOH 559 A HOH 87 6 HOH HOH 560 A HOH 88 6 HOH HOH 561 A HOH 89 6 HOH HOH 562 A HOH 91 6 HOH HOH 563 A HOH 97 6 HOH HOH 564 A HOH 101 6 HOH HOH 565 A HOH 102 6 HOH HOH 566 A HOH 104 6 HOH HOH 567 A HOH 105 6 HOH HOH 568 A HOH 107 6 HOH HOH 569 A HOH 113 6 HOH HOH 570 A HOH 115 6 HOH HOH 571 A HOH 119 6 HOH HOH 572 A HOH 125 6 HOH HOH 573 A HOH 129 6 HOH HOH 574 A HOH 131 6 HOH HOH 575 A HOH 132 6 HOH HOH 576 A HOH 138 6 HOH HOH 577 A HOH 141 6 HOH HOH 578 A HOH 145 6 HOH HOH 579 A HOH 146 6 HOH HOH 580 A HOH 147 6 HOH HOH 581 A HOH 150 6 HOH HOH 582 A HOH 152 6 HOH HOH 583 A HOH 153 6 HOH HOH 584 A HOH 154 6 HOH HOH 585 A HOH 155 6 HOH HOH 586 A HOH 158 6 HOH HOH 587 A HOH 159 6 HOH HOH 588 A HOH 162 6 HOH HOH 589 A HOH 163 6 HOH HOH 590 A HOH 164 6 HOH HOH 591 A HOH 165 6 HOH HOH 592 A HOH 166 6 HOH HOH 593 A HOH 167 6 HOH HOH 594 A HOH 168 6 HOH HOH 595 A HOH 169 6 HOH HOH 596 A HOH 170 6 HOH HOH 597 A HOH 171 6 HOH HOH 598 A HOH 172 6 HOH HOH 599 A HOH 173 6 HOH HOH 600 A HOH 174 6 HOH HOH 601 A HOH 175 6 HOH HOH 602 A HOH 176 6 HOH HOH 603 A HOH 177 6 HOH HOH 604 A HOH 178 6 HOH HOH 605 A HOH 179 6 HOH HOH 606 A HOH 180 6 HOH HOH 607 A HOH 181 6 HOH HOH 608 A HOH 182 6 HOH HOH 609 A HOH 183 6 HOH HOH 610 A HOH 184 6 HOH HOH 611 A HOH 185 6 HOH HOH 612 A HOH 186 6 HOH HOH 613 A HOH 187 6 HOH HOH 614 A HOH 188 6 HOH HOH 615 A HOH 189 6 HOH HOH 616 A HOH 190 6 HOH HOH 617 A HOH 192 6 HOH HOH 618 A HOH 194 6 HOH HOH 619 A HOH 195 6 HOH HOH 620 A HOH 197 6 HOH HOH 621 A HOH 199 6 HOH HOH 622 A HOH 200 6 HOH HOH 623 A HOH 201 6 HOH HOH 624 A HOH 202 6 HOH HOH 625 A HOH 203 6 HOH HOH 626 A HOH 204 6 HOH HOH 627 A HOH 205 6 HOH HOH 628 A HOH 206 6 HOH HOH 629 A HOH 207 6 HOH HOH 630 A HOH 208 6 HOH HOH 631 A HOH 209 6 HOH HOH 632 A HOH 210 6 HOH HOH 633 A HOH 211 6 HOH HOH 634 A HOH 212 6 HOH HOH 635 A HOH 213 6 HOH HOH 636 A HOH 214 6 HOH HOH 637 A HOH 215 6 HOH HOH 638 A HOH 216 6 HOH HOH 639 A HOH 217 6 HOH HOH 640 A HOH 218 6 HOH HOH 641 A HOH 219 6 HOH HOH 642 A HOH 220 6 HOH HOH 643 A HOH 221 6 HOH HOH 644 A HOH 223 6 HOH HOH 645 A HOH 224 6 HOH HOH 646 A HOH 225 6 HOH HOH 647 A HOH 226 6 HOH HOH 648 A HOH 227 6 HOH HOH 649 A ASN 45 n 1 ASN 45 A GLU 46 n 2 GLU 46 A CYS 47 n 3 CYS 47 A LEU 48 n 4 LEU 48 A GLY 49 n 5 GLY 49 A THR 50 n 6 THR 50 A ILE 51 n 7 ILE 51 A GLY 52 n 8 GLY 52 A PRO 53 n 9 PRO 53 A VAL 54 n 10 VAL 54 A THR 55 n 11 THR 55 A PRO 56 n 12 PRO 56 A LEU 57 n 13 LEU 57 A ASP 58 n 14 ASP 58 A ALA 59 n 15 ALA 59 A SER 60 n 16 SER 60 A ASP 61 n 17 ASP 61 A PHE 62 n 18 PHE 62 A ALA 63 n 19 ALA 63 A LEU 64 n 20 LEU 64 A ASP 65 n 21 ASP 65 A ILE 66 n 22 ILE 66 A ARG 67 n 23 ARG 67 A MET 68 n 24 MET 68 A PRO 69 n 25 PRO 69 A GLY 70 n 26 GLY 70 A VAL 71 n 27 VAL 71 A THR 72 n 28 THR 72 A PRO 73 n 29 PRO 73 A LYS 74 n 30 LYS 74 A GLU 75 n 31 GLU 75 A SER 76 n 32 SER 76 A ASP 77 n 33 ASP 77 A THR 78 n 34 THR 78 A TYR 79 n 35 TYR 79 A PHE 80 n 36 PHE 80 A CYS 81 n 37 CYS 81 A MET 82 n 38 MET 82 A SER 83 n 39 SER 83 A MET 84 n 40 MET 84 A ARG 85 n 41 ARG 85 A LEU 86 n 42 LEU 86 A PRO 87 n 43 PRO 87 A VAL 88 n 44 VAL 88 A ASP 89 n 45 ASP 89 A GLU 90 n 46 GLU 90 A GLU 91 n 47 GLU 91 A ALA 92 n 48 ALA 92 A PHE 93 n 49 PHE 93 A VAL 94 n 50 VAL 94 A ILE 95 n 51 ILE 95 A ASP 96 n 52 ASP 96 A PHE 97 n 53 PHE 97 A LYS 98 n 54 LYS 98 A PRO 99 n 55 PRO 99 A ARG 100 n 56 ARG 100 A ALA 101 n 57 ALA 101 A SER 102 n 58 SER 102 A MET 103 n 59 MET 103 A ASP 104 n 60 ASP 104 A THR 105 n 61 THR 105 A VAL 106 n 62 VAL 106 A HIS 107 n 63 HIS 107 A HIS 108 n 64 HIS 108 A MET 109 n 65 MET 109 A LEU 110 n 66 LEU 110 A LEU 111 n 67 LEU 111 A PHE 112 n 68 PHE 112 A GLY 113 n 69 GLY 113 A CYS 114 n 70 CYS 114 A ASN 115 n 71 ASN 115 A MET 116 n 72 MET 116 A PRO 117 n 73 PRO 117 A SER 118 n 74 SER 118 A SER 119 n 75 SER 119 A THR 120 n 76 THR 120 A GLY 121 n 77 GLY 121 A SER 122 n 78 SER 122 A TYR 123 n 79 TYR 123 A TRP 124 n 80 TRP 124 A PHE 125 n 81 PHE 125 A CYS 126 n 82 CYS 126 A ASP 127 n 83 ASP 127 A GLU 128 n 84 GLU 128 A GLY 129 n 85 GLY 129 A THR 130 n 86 THR 130 A CYS 131 n 87 CYS 131 A THR 132 n 88 THR 132 A ASP 133 n 89 ASP 133 A LYS 134 n 90 LYS 134 A ALA 135 n 91 ALA 135 A ASN 136 n 92 ASN 136 A ILE 137 n 93 ILE 137 A LEU 138 n 94 LEU 138 A TYR 139 n 95 TYR 139 A ALA 140 n 96 ALA 140 A TRP 141 n 97 TRP 141 A ALA 142 n 98 ALA 142 A ARG 143 n 99 ARG 143 A ASN 144 n 100 ASN 144 A ALA 145 n 101 ALA 145 A PRO 146 n 102 PRO 146 A PRO 147 n 103 PRO 147 A THR 148 n 104 THR 148 A ARG 149 n 105 ARG 149 A LEU 150 n 106 LEU 150 A PRO 151 n 107 PRO 151 A LYS 152 n 108 LYS 152 A GLY 153 n 109 GLY 153 A VAL 154 n 110 VAL 154 A GLY 155 n 111 GLY 155 A PHE 156 n 112 PHE 156 A ARG 157 n 113 ARG 157 A VAL 158 n 114 VAL 158 A GLY 159 n 115 GLY 159 A GLY 160 n 116 GLY 160 A GLU 161 n 117 GLU 161 A THR 162 n 118 THR 162 A GLY 163 n 119 GLY 163 A SER 164 n 120 SER 164 A LYS 165 n 121 LYS 165 A TYR 166 n 122 TYR 166 A PHE 167 n 123 PHE 167 A VAL 168 n 124 VAL 168 A LEU 169 n 125 LEU 169 A GLN 170 n 126 GLN 170 A VAL 171 n 127 VAL 171 A HIS 172 n 128 HIS 172 A TYR 173 n 129 TYR 173 A GLY 174 n 130 GLY 174 A ASP 175 n 131 ASP 175 A ILE 176 n 132 ILE 176 A SER 177 n 133 SER 177 A ALA 178 n 134 ALA 178 A PHE 179 n 135 PHE 179 A ARG 180 n 136 ARG 180 A ASP 181 n 137 ASP 181 A ASN 182 n 138 ASN 182 A HIS 183 n 139 HIS 183 A LYS 184 n 140 LYS 184 A ASP 185 n 141 ASP 185 A CYS 186 n 142 CYS 186 A SER 187 n 143 SER 187 A GLY 188 n 144 GLY 188 A VAL 189 n 145 VAL 189 A SER 190 n 146 SER 190 A VAL 191 n 147 VAL 191 A HIS 192 n 148 HIS 192 A LEU 193 n 149 LEU 193 A THR 194 n 150 THR 194 A ARG 195 n 151 ARG 195 A VAL 196 n 152 VAL 196 A PRO 197 n 153 PRO 197 A GLN 198 n 154 GLN 198 A PRO 199 n 155 PRO 199 A LEU 200 n 156 LEU 200 A ILE 201 n 157 ILE 201 A ALA 202 n 158 ALA 202 A GLY 203 n 159 GLY 203 A MET 204 n 160 MET 204 A TYR 205 n 161 TYR 205 A LEU 206 n 162 LEU 206 A MET 207 n 163 MET 207 A MET 208 n 164 MET 208 A SER 209 n 165 SER 209 A VAL 210 n 166 VAL 210 A ASP 211 n 167 ASP 211 A THR 212 n 168 THR 212 A VAL 213 n 169 VAL 213 A ILE 214 n 170 ILE 214 A PRO 215 n 171 PRO 215 A PRO 216 n 172 PRO 216 A GLY 217 n 173 GLY 217 A GLU 218 n 174 GLU 218 A LYS 219 n 175 LYS 219 A VAL 220 n 176 VAL 220 A VAL 221 n 177 VAL 221 A ASN 222 n 178 ASN 222 A ALA 223 n 179 ALA 223 A ASP 224 n 180 ASP 224 A ILE 225 n 181 ILE 225 A SER 226 n 182 SER 226 A CYS 227 n 183 CYS 227 A GLN 228 n 184 GLN 228 A TYR 229 n 185 TYR 229 A LYS 230 n 186 LYS 230 A MET 231 n 187 MET 231 A TYR 232 n 188 TYR 232 A PRO 233 n 189 PRO 233 A MET 234 n 190 MET 234 A HIS 235 n 191 HIS 235 A VAL 236 n 192 VAL 236 A PHE 237 n 193 PHE 237 A ALA 238 n 194 ALA 238 A TYR 239 n 195 TYR 239 A ARG 240 n 196 ARG 240 A VAL 241 n 197 VAL 241 A HIS 242 n 198 HIS 242 A THR 243 n 199 THR 243 A HIS 244 n 200 HIS 244 A HIS 245 n 201 HIS 245 A LEU 246 n 202 LEU 246 A GLY 247 n 203 GLY 247 A LYS 248 n 204 LYS 248 A VAL 249 n 205 VAL 249 A VAL 250 n 206 VAL 250 A SER 251 n 207 SER 251 A GLY 252 n 208 GLY 252 A TYR 253 n 209 TYR 253 A ARG 254 n 210 ARG 254 A VAL 255 n 211 VAL 255 A ARG 256 n 212 ARG 256 A ASN 257 n 213 ASN 257 A GLY 258 n 214 GLY 258 A GLN 259 n 215 GLN 259 A TRP 260 n 216 TRP 260 A THR 261 n 217 THR 261 A LEU 262 n 218 LEU 262 A ILE 263 n 219 ILE 263 A GLY 264 n 220 GLY 264 A ARG 265 n 221 ARG 265 A GLN 266 n 222 GLN 266 A ASN 267 n 223 ASN 267 A PRO 268 n 224 PRO 268 A GLN 269 n 225 GLN 269 A LEU 270 n 226 LEU 270 A PRO 271 n 227 PRO 271 A GLN 272 n 228 GLN 272 A ALA 273 n 229 ALA 273 A PHE 274 n 230 PHE 274 A TYR 275 n 231 TYR 275 A PRO 276 n 232 PRO 276 A VAL 277 n 233 VAL 277 A GLU 278 n 234 GLU 278 A HIS 279 n 235 HIS 279 A PRO 280 n 236 PRO 280 A VAL 281 n 237 VAL 281 A ASP 282 n 238 ASP 282 A VAL 283 n 239 VAL 283 A THR 284 n 240 THR 284 A PHE 285 n 241 PHE 285 A GLY 286 n 242 GLY 286 A ASP 287 n 243 ASP 287 A ILE 288 n 244 ILE 288 A LEU 289 n 245 LEU 289 A ALA 290 n 246 ALA 290 A ALA 291 n 247 ALA 291 A ARG 292 n 248 ARG 292 A CYS 293 n 249 CYS 293 A VAL 294 n 250 VAL 294 A PHE 295 n 251 PHE 295 A THR 296 n 252 THR 296 A GLY 297 n 253 GLY 297 A GLU 298 n 254 GLU 298 A GLY 299 n 255 GLY 299 A ARG 300 n 256 ARG 300 A THR 301 n 257 THR 301 A GLU 302 n 258 GLU 302 A ALA 303 n 259 ALA 303 A THR 304 n 260 THR 304 A HIS 305 n 261 HIS 305 A ILE 306 n 262 ILE 306 A GLY 307 n 263 GLY 307 A GLY 308 n 264 GLY 308 A THR 309 n 265 THR 309 A SER 310 n 266 SER 310 A SER 311 n 267 SER 311 A ASP 312 n 268 ASP 312 A GLU 313 n 269 GLU 313 A MET 314 n 270 MET 314 A CYS 315 n 271 CYS 315 A ASN 316 n 272 ASN 316 A LEU 317 n 273 LEU 317 A TYR 318 n 274 TYR 318 A ILE 319 n 275 ILE 319 A MET 320 n 276 MET 320 A TYR 321 n 277 TYR 321 A TYR 322 n 278 TYR 322 A MET 323 n 279 MET 323 A GLU 324 n 280 GLU 324 A ALA 325 n 281 ALA 325 A LYS 326 n 282 LYS 326 A TYR 327 n 283 TYR 327 A ALA 328 n 284 ALA 328 A LEU 329 n 285 LEU 329 A SER 330 n 286 SER 330 A PHE 331 n 287 PHE 331 A MET 332 n 288 MET 332 A THR 333 n 289 THR 333 A CYS 334 n 290 CYS 334 A THR 335 n 291 THR 335 A LYS 336 n 292 LYS 336 A ASN 337 n 293 ASN 337 A VAL 338 n 294 VAL 338 A ALA 339 n 295 ALA 339 A PRO 340 n 296 PRO 340 A ASP 341 n 297 ASP 341 A MET 342 n 298 MET 342 A PHE 343 n 299 PHE 343 A ARG 344 n 300 ARG 344 A THR 345 n 301 THR 345 A ILE 346 n 302 ILE 346 A PRO 347 n 303 PRO 347 A ALA 348 n 304 ALA 348 A GLU 349 n 305 GLU 349 A ALA 350 n 306 ALA 350 A ASN 351 n 307 ASN 351 A ILE 352 n 308 ILE 352 A PRO 353 n 309 PRO 353 A ILE 354 n 310 ILE 354 A PRO 355 n 311 PRO 355 A VAL 356 n 312 VAL 356 A author_and_software_defined_assembly PISA 1 monomeric A HOH 547 J O HOH 1_555 A NI 403 D NI NI 1_555 A HIS 235 A NE2 HIS 191 1_555 93.7 A HIS 107 A ND1 HIS 63 1_555 A CU 401 B CU CU 1_555 A HIS 108 A ND1 HIS 64 1_555 150.5 A HIS 107 A ND1 HIS 63 1_555 A CU 401 B CU CU 1_555 A HIS 172 A ND1 HIS 128 1_555 104.3 A HIS 108 A ND1 HIS 64 1_555 A CU 401 B CU CU 1_555 A HIS 172 A ND1 HIS 128 1_555 101.3 A PEO 404 E O2 PEO 1_555 A CU 402 C CU CU 1_555 A HIS 242 A NE2 HIS 198 1_555 141.8 A PEO 404 E O2 PEO 1_555 A CU 402 C CU CU 1_555 A HIS 244 A NE2 HIS 200 1_555 91.7 A HIS 242 A NE2 HIS 198 1_555 A CU 402 C CU CU 1_555 A HIS 244 A NE2 HIS 200 1_555 108.7 A PEO 404 E O2 PEO 1_555 A CU 402 C CU CU 1_555 A PEO 404 E O1 PEO 1_555 43.6 A HIS 242 A NE2 HIS 198 1_555 A CU 402 C CU CU 1_555 A PEO 404 E O1 PEO 1_555 107.0 A HIS 244 A NE2 HIS 200 1_555 A CU 402 C CU CU 1_555 A PEO 404 E O1 PEO 1_555 134.9 A PEO 404 E O2 PEO 1_555 A CU 402 C CU CU 1_555 A MET 314 A SD MET 270 1_555 96.4 A HIS 242 A NE2 HIS 198 1_555 A CU 402 C CU CU 1_555 A MET 314 A SD MET 270 1_555 104.5 A HIS 244 A NE2 HIS 200 1_555 A CU 402 C CU CU 1_555 A MET 314 A SD MET 270 1_555 112.6 A PEO 404 E O1 PEO 1_555 A CU 402 C CU CU 1_555 A MET 314 A SD MET 270 1_555 83.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 55 A N THR 11 A O ALA 63 A O ALA 19 A N LEU 64 A N LEU 20 A O VAL 191 A O VAL 147 A O SER 190 A O SER 146 A N LYS 98 A N LYS 54 A N ALA 92 A N ALA 48 A O VAL 158 A O VAL 114 A N GLY 155 A N GLY 111 A O LEU 200 A O LEU 156 A N TYR 205 A N TYR 161 A O ILE 319 A O ILE 275 A O TYR 318 A O TYR 274 A N ARG 240 A N ARG 196 A N TYR 239 A N TYR 195 A O TYR 275 A O TYR 231 A N THR 55 A N THR 11 A O ALA 63 A O ALA 19 A N LEU 64 A N LEU 20 A O VAL 191 A O VAL 147 A O SER 190 A O SER 146 A N LYS 98 A N LYS 54 A N ALA 92 A N ALA 48 A O VAL 158 A O VAL 114 A N GLY 155 A N GLY 111 A O LEU 200 A O LEU 156 A N LEU 206 A N LEU 162 A O MET 332 A O MET 288 A O TRP 124 A O TRP 80 A N CYS 81 A N CYS 37 A N PHE 80 A N PHE 36 A O VAL 171 A O VAL 127 A O GLN 170 A O GLN 126 A N LEU 110 A N LEU 66 A N GLY 113 A N GLY 69 A O ASN 136 A O ASN 92 A N ILE 214 A N ILE 170 A O THR 304 A O THR 260 A N VAL 221 A N VAL 177 A O PHE 295 A O PHE 251 A O ILE 288 A O ILE 244 A N VAL 255 A N VAL 211 A N ARG 254 A N ARG 210 A O THR 261 A O THR 217 1 A A O O HOH HOH 518 554 2.16 1_555 4_556 1 A A O O HOH HOH 562 586 2.19 1_555 3_646 1 A ASP 58 -164.37 -157.97 1 A ASP 127 -69.34 47.33 1 A GLU 128 82.77 31.91 1 A ILE 176 -94.66 31.36 1 A ALA 178 64.57 -12.39 1 A HIS 244 -95.42 -153.57 109.550 47.4079 23.420 0.8000 0.0000 -0.0000 -2.6400 0.0000 1.8400 0.9580 0.9430 U VALUES: REFINED INDIVIDUALLY 0.2442 0.2043 0.2063 1.9800 23.2200 1351 26633 5.1000 96.8300 1.000 1.000 4.2520 0.1190 RANDOM 1 THROUGHOUT 0.000 FOURIER SYNTHESIS 0.1740 0.1600 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD MASK 1.9800 23.2200 149 2611 29 0 2433 0.009 0.020 2537 1.216 1.958 3435 6.696 5.000 311 34.819 23.148 108 14.814 15.000 392 17.341 15.000 15 0.086 0.200 374 0.005 0.021 1932 0.3750 0.2770 2.0270 75 1591 1666 20 90.4000 1.970 25.000 4E4Z 26738 0.063 1.762 1 14.200 11.800 97.400 0.692 1.970 2.000 1291 1.453 1 9.400 95.100 0.621 2.000 2.040 1276 1.451 1 10.300 96.300 0.601 2.040 2.080 1313 1.515 1 11.000 96.800 0.530 2.080 2.120 1320 1.482 1 11.700 97.300 0.449 2.120 2.170 1309 1.515 1 12.000 98.300 0.382 2.170 2.220 1322 1.592 1 12.200 97.300 0.328 2.220 2.270 1336 1.617 1 12.300 97.700 0.294 2.270 2.340 1324 1.634 1 12.400 98.700 0.232 2.340 2.400 1329 1.631 1 12.400 98.700 0.201 2.400 2.480 1342 1.689 1 12.400 98.100 0.161 2.480 2.570 1324 1.759 1 12.400 98.300 0.136 2.570 2.670 1348 1.814 1 12.300 98.600 0.101 2.670 2.790 1356 1.882 1 12.300 98.800 0.077 2.790 2.940 1364 1.856 1 12.200 98.800 0.063 2.940 3.130 1355 1.896 1 12.200 98.400 0.050 3.130 3.370 1352 1.948 1 12.200 99.300 0.040 3.370 3.700 1382 1.848 1 12.100 98.700 0.036 3.700 4.240 1371 1.905 1 11.800 97.800 0.034 4.240 5.330 1355 2.008 1 11.500 95.600 0.040 5.330 25.000 1369 2.633 1 10.700 90.900 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.6.0117 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 data collection CBASS Peptidyl-glycine alpha-amidating monooxygenase (E.C.1.14.17.3) Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) in complex with hydrogen peroxide (1.98 A) 1 N N 2 N N 2 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N 6 N N A LEU 48 A LEU 4 HELX_P A GLY 52 A GLY 8 5 1 5 A ALA 339 A ALA 295 HELX_P A ILE 346 A ILE 302 5 2 8 A PRO 347 A PRO 303 HELX_P A ASN 351 A ASN 307 5 3 5 disulf 2.042 A CYS 47 A SG CYS 3 1_555 A CYS 186 A SG CYS 142 1_555 disulf 2.022 A CYS 81 A SG CYS 37 1_555 A CYS 126 A SG CYS 82 1_555 disulf 2.046 A CYS 114 A SG CYS 70 1_555 A CYS 131 A SG CYS 87 1_555 disulf 2.046 A CYS 227 A SG CYS 183 1_555 A CYS 334 A SG CYS 290 1_555 disulf 2.027 A CYS 293 A SG CYS 249 1_555 A CYS 315 A SG CYS 271 1_555 metalc 1.858 A NI 403 D NI NI 1_555 A HOH 547 J O HOH 1_555 metalc 1.927 A HIS 107 A ND1 HIS 63 1_555 A CU 401 B CU CU 1_555 metalc 1.981 A CU 402 C CU CU 1_555 A PEO 404 E O2 PEO 1_555 metalc 2.034 A HIS 242 A NE2 HIS 198 1_555 A CU 402 C CU CU 1_555 metalc 2.048 A HIS 108 A ND1 HIS 64 1_555 A CU 401 B CU CU 1_555 metalc 2.065 A HIS 244 A NE2 HIS 200 1_555 A CU 402 C CU CU 1_555 metalc 2.089 A CU 402 C CU CU 1_555 A PEO 404 E O1 PEO 1_555 metalc 2.116 A HIS 235 A NE2 HIS 191 1_555 A NI 403 D NI NI 1_555 metalc 2.150 A HIS 172 A ND1 HIS 128 1_555 A CU 401 B CU CU 1_555 metalc 2.400 A MET 314 A SD MET 270 1_555 A CU 402 C CU CU 1_555 OXIDOREDUCTASE Catalysis, Mixed Function Oxygenases, Multienzyme Complexes, Stereoisomerism, OXIDOREDUCTASE AMD_RAT UNP 1 45 P14925 NECLGTIGPVTPLDASDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYW FCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSVHLTRVPQPLIAGM YLMMSVDTVIPPGEKVVNADISCQYKMYPMHVFAYRVHTHHLGKVVSGYRVRNGQWTLIGRQNPQLPQAFYPVEHPVDVT FGDILAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKYALSFMTCTKNVAPDMFRTIPAEANIPIPV 45 356 4E4Z 45 356 P14925 A 1 1 312 9 7 5 2 4 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 54 A VAL 10 A PRO 56 A PRO 12 A ASP 61 A ASP 17 A ARG 67 A ARG 23 A GLY 188 A GLY 144 A THR 194 A THR 150 A ALA 92 A ALA 48 A ARG 100 A ARG 56 A VAL 154 A VAL 110 A VAL 158 A VAL 114 A LEU 200 A LEU 156 A MET 208 A MET 164 A ASN 316 A ASN 272 A GLU 324 A GLU 280 A MET 234 A MET 190 A HIS 242 A HIS 198 A TYR 275 A TYR 231 A VAL 283 A VAL 239 A VAL 54 A VAL 10 A PRO 56 A PRO 12 A ASP 61 A ASP 17 A ARG 67 A ARG 23 A GLY 188 A GLY 144 A THR 194 A THR 150 A ALA 92 A ALA 48 A ARG 100 A ARG 56 A VAL 154 A VAL 110 A VAL 158 A VAL 114 A LEU 200 A LEU 156 A MET 208 A MET 164 A PHE 331 A PHE 287 A CYS 334 A CYS 290 A TRP 124 A TRP 80 A PHE 125 A PHE 81 A TYR 79 A TYR 35 A ARG 85 A ARG 41 A TYR 166 A TYR 122 A HIS 172 A HIS 128 A HIS 108 A HIS 64 A CYS 114 A CYS 70 A ASN 136 A ASN 92 A ALA 142 A ALA 98 A VAL 213 A VAL 169 A ILE 214 A ILE 170 A THR 304 A THR 260 A HIS 305 A HIS 261 A VAL 221 A VAL 177 A GLN 228 A GLN 184 A ILE 288 A ILE 244 A PHE 295 A PHE 251 A GLY 247 A GLY 203 A ARG 256 A ARG 212 A GLN 259 A GLN 215 A GLN 266 A GLN 222 BINDING SITE FOR RESIDUE CU A 401 Software 3 BINDING SITE FOR RESIDUE CU A 402 Software 5 BINDING SITE FOR RESIDUE NI A 403 Software 3 BINDING SITE FOR RESIDUE PEO A 404 Software 6 BINDING SITE FOR RESIDUE GOL A 405 Software 7 BINDING SITE FOR RESIDUE GOL A 406 Software 7 BINDING SITE FOR RESIDUE GOL A 407 Software 7 BINDING SITE FOR RESIDUE GOL A 408 Software 8 A HIS 107 A HIS 63 3 1_555 A HIS 108 A HIS 64 3 1_555 A HIS 172 A HIS 128 3 1_555 A HIS 242 A HIS 198 5 1_555 A HIS 244 A HIS 200 5 1_555 A MET 314 A MET 270 5 1_555 A PEO 404 E PEO 5 1_555 A HOH 539 J HOH 5 1_555 A HIS 235 A HIS 191 3 1_555 A HIS 305 A HIS 261 3 4_456 A HOH 547 J HOH 3 1_555 A GLU 128 A GLU 84 6 1_555 A HIS 242 A HIS 198 6 1_555 A HIS 244 A HIS 200 6 1_555 A MET 314 A MET 270 6 1_555 A CU 402 C CU 6 1_555 A HOH 539 J HOH 6 1_555 A LEU 138 A LEU 94 7 1_555 A TYR 139 A TYR 95 7 1_555 A THR 148 A THR 104 7 1_555 A MET 320 A MET 276 7 1_555 A HOH 546 J HOH 7 1_555 A HOH 559 J HOH 7 1_555 A HOH 567 J HOH 7 1_555 A TYR 205 A TYR 161 7 1_555 A GLN 228 A GLN 184 7 1_555 A TYR 229 A TYR 185 7 1_555 A LYS 230 A LYS 186 7 1_555 A MET 231 A MET 187 7 1_555 A THR 333 A THR 289 7 1_555 A HOH 644 J HOH 7 1_555 A VAL 255 A VAL 211 7 1_555 A ARG 256 A ARG 212 7 1_555 A ASN 257 A ASN 213 7 1_555 A GLY 258 A GLY 214 7 1_555 A GLY 286 A GLY 242 7 1_555 A ILE 288 A ILE 244 7 1_555 A HOH 621 J HOH 7 1_555 A GLY 113 A GLY 69 8 1_555 A ASN 136 A ASN 92 8 1_555 A LEU 138 A LEU 94 8 1_555 A ARG 157 A ARG 113 8 1_555 A GLY 163 A GLY 119 8 1_555 A SER 164 A SER 120 8 1_555 A HOH 589 J HOH 8 1_555 A HOH 590 J HOH 8 1_555 19 P 21 21 21