0.022146
0.012786
0.000000
0.000000
0.025572
0.000000
0.000000
0.000000
0.009612
0.000000
0.000000
0.000000
Malinina, L.
Popov, A.
Tamjar, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
45.154
45.154
104.036
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
H2 O
18.015
WATER
non-polymer
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
N
14
N
N
N
15
N
C
N
16
N
O
N
17
N
N
N
18
N
C
N
19
N
N
N
20
N
C
N
21
N
C
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
O
N
37
N
P
N
38
N
O
N
39
N
O
N
40
N
O
N
41
N
C
N
42
R
C
N
43
N
O
N
44
S
C
N
45
N
O
N
46
R
C
N
47
N
O
N
48
R
C
Y
49
N
N
Y
50
N
C
Y
51
N
N
Y
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
C
N
57
N
N
N
58
N
N
Y
59
N
C
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
O
N
78
N
P
N
79
N
O
N
80
N
O
N
81
N
O
N
82
N
C
N
83
R
C
N
84
N
O
N
85
S
C
N
86
N
O
N
87
R
C
N
88
N
O
N
89
R
C
N
90
N
N
N
91
N
C
N
92
N
O
N
93
N
N
N
94
N
C
N
95
N
O
N
96
N
C
N
97
N
C
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
doub
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
doub
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
Y
61
N
sing
Y
62
N
sing
Y
63
N
doub
N
64
N
sing
Y
65
N
sing
N
66
N
sing
Y
67
N
doub
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
US
J.Biomol.Struct.Dyn.
JBSDD6
0646
0739-1102
30
505
523
10.1080/07391102.2012.687517
22731704
Structural dynamics of double-helical RNAs composed of CUG/CUG- and CUG/CGG-repeats.
2012
10.2210/pdb4e5c/pdb
pdb_00004e5c
100
1
CCD
2010-12-05
ADSC QUANTUM 315r
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.9724
1.0
ID23-1
ESRF
0.9724
SYNCHROTRON
ESRF BEAMLINE ID23-1
pGG(CGG)3(CUG)2CC
6155.705
5'-R(P*GP*GP*CP*GP*GP*CP*GP*GP*CP*GP*GP*CP*UP*GP*CP*UP*GP*CP*C)-3'
2
syn
polymer
18.015
water
164
nat
water
no
no
GGCGGCGGCGGCUGCUGCC
GGCGGCGGCGGCUGCUGCC
A,B
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
2.49
50.54
VAPOR DIFFUSION, HANGING DROP
6.0
1.8 mM ammonium sulfate, 0.1 M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
-7.433
1
19
A
1
B
19
-0.548
A_G1:C19_B
1
-2.023
-0.263
-0.277
-0.113
-4.534
1
19
A
2
B
18
-2.963
A_G2:C18_B
2
-4.972
-0.321
-0.226
-0.200
0.666
1
19
A
3
B
17
-2.852
A_C3:G17_B
3
-0.174
0.157
-0.132
-0.166
-2.442
1
28
A
4
B
16
0.417
A_G4:U16_B
4
-10.516
-2.429
-0.119
-0.574
-7.651
1
19
A
5
B
15
-0.111
A_G5:C15_B
5
-5.421
-0.161
-0.243
-0.123
-3.383
1
19
A
6
B
14
0.163
A_C6:G14_B
6
-0.744
0.213
-0.060
-0.087
-0.743
1
28
A
7
B
13
-4.433
A_G7:U13_B
7
-9.099
-2.377
0.004
-0.660
1.167
1
19
A
8
B
12
-0.489
A_G8:C12_B
8
-10.219
-0.252
0.042
-0.183
3.339
1
19
A
9
B
11
-2.376
A_C9:G11_B
9
-9.175
0.250
-0.031
-0.188
-10.036
3
6
A
10
B
10
-89.071
A_G10:G10_B
10
-3.211
1.623
0.031
3.445
0.453
1
19
A
11
B
9
-0.328
A_G11:C9_B
11
-6.925
-0.212
0.081
-0.163
9.345
1
19
A
12
B
8
0.085
A_C12:G8_B
12
-11.476
0.275
-0.039
-0.103
5.525
1
28
A
13
B
7
0.739
A_U13:G7_B
13
-14.405
2.172
-0.212
-0.455
-1.585
1
19
A
14
B
6
-0.658
A_G14:C6_B
14
-6.560
-0.360
-0.097
-0.121
1.871
1
19
A
15
B
5
-0.771
A_C15:G5_B
15
-10.507
0.211
0.017
-0.144
1.420
1
28
A
16
B
4
-2.157
A_U16:G4_B
16
-15.723
2.545
0.056
-0.587
-4.229
1
19
A
17
B
3
2.181
A_G17:C3_B
17
-14.364
-0.255
-0.126
-0.104
3.651
1
19
A
18
B
2
0.107
A_C18:G2_B
18
-17.180
0.412
-0.234
-0.134
7.945
1
19
A
19
B
1
0.601
A_C19:G1_B
19
-11.729
0.297
-0.289
0.362
3.055
29.747
A
A
1
2
6.430
B
B
19
18
3.281
3.293
-0.647
-2.176
AA_G1G2:C18C19_BB
1
-1.595
3.114
29.526
-4.908
0.935
3.027
30.138
A
A
2
3
7.267
B
B
18
17
3.273
3.769
-0.154
-1.827
AA_G2C3:G17C18_BB
2
-0.698
1.346
29.899
-4.257
0.159
2.434
20.662
A
A
3
4
19.540
B
B
17
16
3.390
6.877
1.556
-2.286
AA_C3G4:U16G17_BB
3
-0.176
0.501
19.494
-9.125
-4.408
3.054
40.918
A
A
4
5
9.246
B
B
16
15
3.382
6.439
-0.462
-1.987
AA_G4G5:C15U16_BB
4
-1.011
1.452
40.418
-3.540
0.551
3.026
30.189
A
A
5
6
4.175
B
B
15
14
3.196
2.173
0.307
-2.353
AA_G5C6:G14C15_BB
5
0.389
-0.748
30.110
-4.938
-0.514
1.966
16.068
A
A
6
7
21.364
B
B
14
13
3.171
5.837
0.088
-2.743
AA_C6G7:U13G14_BB
6
-0.031
0.112
14.977
-13.247
-0.331
3.023
41.211
A
A
7
8
8.354
B
B
13
12
3.248
5.858
-0.245
-1.498
AA_G7G8:C12U13_BB
7
-2.714
3.871
40.724
-2.738
0.066
2.779
32.615
A
A
8
9
11.541
B
B
12
11
3.223
6.441
-0.207
-2.003
AA_G8C9:G11C12_BB
8
-0.319
0.571
31.988
-4.604
0.317
2.906
79.721
A
A
9
10
5.873
B
B
11
10
3.175
7.512
0.713
-3.892
AA_C9G10:G10G11_BB
9
7.823
-6.116
79.102
-3.224
-0.361
2.907
-24.312
A
A
10
11
-14.680
B
B
10
9
3.214
6.110
-1.565
0.237
AA_G10G11:C9G10_BB
10
-2.138
-5.136
-23.447
-2.395
-4.356
2.938
33.707
A
A
11
12
5.212
B
B
9
8
3.084
3.018
-0.254
-1.578
AA_G11C12:G8C9_BB
11
-0.495
0.854
33.572
-3.174
0.363
3.125
38.862
A
A
12
13
7.995
B
B
8
7
3.341
5.296
0.631
-1.774
AA_C12U13:G7G8_BB
12
3.917
-5.913
38.321
-3.308
-0.474
1.713
24.043
A
A
13
14
33.845
B
B
7
6
3.338
13.263
-1.702
-2.372
AA_U13G14:C6G7_BB
13
-3.692
9.422
19.759
-9.326
3.076
2.819
33.337
A
A
14
15
12.930
B
B
6
5
3.243
7.357
-0.098
-1.625
AA_G14C15:G5C6_BB
14
-1.528
2.685
32.503
-3.981
-0.068
2.999
42.887
A
A
15
16
11.698
B
B
5
4
3.302
8.500
-0.063
-1.270
AA_C15U16:G4G5_BB
15
1.365
-1.879
42.054
-2.559
0.218
1.228
25.154
A
A
16
17
37.818
B
B
4
3
3.142
15.302
-0.185
-2.042
AA_U16G17:C3G4_BB
16
3.025
-7.475
19.795
-8.067
1.093
2.966
36.652
A
A
17
18
6.656
B
B
3
2
3.092
4.177
-0.072
-0.969
AA_G17C18:G2C3_BB
17
0.215
-0.343
36.421
-2.072
0.142
2.898
30.851
A
A
18
19
10.796
B
B
2
1
3.206
5.707
0.207
-1.450
AA_C18C19:G1G2_BB
18
2.152
-4.070
30.257
-3.772
0.006
software
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Database references
Refinement description
Data collection
Database references
1
0
2012-07-11
1
1
2012-08-29
1
2
2017-11-15
1
3
2024-02-28
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
crystal structure of RNA duplex composed of CUG repeats
RCSB
Y
RCSB
2012-03-14
REL
REL
HOH
water
HOH
3
2
HOH
HOH
101
A
HOH
5
2
HOH
HOH
102
A
HOH
8
2
HOH
HOH
103
A
HOH
13
2
HOH
HOH
104
A
HOH
16
2
HOH
HOH
105
A
HOH
17
2
HOH
HOH
106
A
HOH
21
2
HOH
HOH
107
A
HOH
22
2
HOH
HOH
108
A
HOH
26
2
HOH
HOH
109
A
HOH
27
2
HOH
HOH
110
A
HOH
30
2
HOH
HOH
111
A
HOH
31
2
HOH
HOH
112
A
HOH
33
2
HOH
HOH
113
A
HOH
34
2
HOH
HOH
114
A
HOH
35
2
HOH
HOH
115
A
HOH
36
2
HOH
HOH
116
A
HOH
37
2
HOH
HOH
117
A
HOH
38
2
HOH
HOH
118
A
HOH
39
2
HOH
HOH
119
A
HOH
40
2
HOH
HOH
120
A
HOH
42
2
HOH
HOH
121
A
HOH
44
2
HOH
HOH
122
A
HOH
45
2
HOH
HOH
123
A
HOH
46
2
HOH
HOH
124
A
HOH
47
2
HOH
HOH
125
A
HOH
48
2
HOH
HOH
126
A
HOH
49
2
HOH
HOH
127
A
HOH
51
2
HOH
HOH
128
A
HOH
52
2
HOH
HOH
129
A
HOH
53
2
HOH
HOH
130
A
HOH
56
2
HOH
HOH
131
A
HOH
59
2
HOH
HOH
132
A
HOH
63
2
HOH
HOH
133
A
HOH
64
2
HOH
HOH
134
A
HOH
65
2
HOH
HOH
135
A
HOH
70
2
HOH
HOH
136
A
HOH
71
2
HOH
HOH
137
A
HOH
72
2
HOH
HOH
138
A
HOH
74
2
HOH
HOH
139
A
HOH
75
2
HOH
HOH
140
A
HOH
77
2
HOH
HOH
141
A
HOH
78
2
HOH
HOH
142
A
HOH
79
2
HOH
HOH
143
A
HOH
80
2
HOH
HOH
144
A
HOH
82
2
HOH
HOH
145
A
HOH
83
2
HOH
HOH
146
A
HOH
84
2
HOH
HOH
147
A
HOH
86
2
HOH
HOH
148
A
HOH
87
2
HOH
HOH
149
A
HOH
88
2
HOH
HOH
150
A
HOH
91
2
HOH
HOH
151
A
HOH
93
2
HOH
HOH
152
A
HOH
94
2
HOH
HOH
153
A
HOH
100
2
HOH
HOH
154
A
HOH
103
2
HOH
HOH
155
A
HOH
105
2
HOH
HOH
156
A
HOH
107
2
HOH
HOH
157
A
HOH
108
2
HOH
HOH
158
A
HOH
109
2
HOH
HOH
159
A
HOH
111
2
HOH
HOH
160
A
HOH
112
2
HOH
HOH
161
A
HOH
113
2
HOH
HOH
162
A
HOH
114
2
HOH
HOH
163
A
HOH
115
2
HOH
HOH
164
A
HOH
116
2
HOH
HOH
165
A
HOH
118
2
HOH
HOH
166
A
HOH
119
2
HOH
HOH
167
A
HOH
120
2
HOH
HOH
168
A
HOH
123
2
HOH
HOH
169
A
HOH
127
2
HOH
HOH
170
A
HOH
129
2
HOH
HOH
171
A
HOH
131
2
HOH
HOH
172
A
HOH
134
2
HOH
HOH
173
A
HOH
136
2
HOH
HOH
174
A
HOH
137
2
HOH
HOH
175
A
HOH
138
2
HOH
HOH
176
A
HOH
140
2
HOH
HOH
177
A
HOH
141
2
HOH
HOH
178
A
HOH
144
2
HOH
HOH
179
A
HOH
145
2
HOH
HOH
180
A
HOH
146
2
HOH
HOH
181
A
HOH
147
2
HOH
HOH
182
A
HOH
159
2
HOH
HOH
183
A
HOH
160
2
HOH
HOH
184
A
HOH
163
2
HOH
HOH
185
A
HOH
164
2
HOH
HOH
186
A
HOH
1
2
HOH
HOH
101
B
HOH
2
2
HOH
HOH
102
B
HOH
4
2
HOH
HOH
103
B
HOH
6
2
HOH
HOH
104
B
HOH
7
2
HOH
HOH
105
B
HOH
9
2
HOH
HOH
106
B
HOH
10
2
HOH
HOH
107
B
HOH
11
2
HOH
HOH
108
B
HOH
12
2
HOH
HOH
109
B
HOH
14
2
HOH
HOH
110
B
HOH
15
2
HOH
HOH
111
B
HOH
18
2
HOH
HOH
112
B
HOH
19
2
HOH
HOH
113
B
HOH
20
2
HOH
HOH
114
B
HOH
23
2
HOH
HOH
115
B
HOH
24
2
HOH
HOH
116
B
HOH
25
2
HOH
HOH
117
B
HOH
28
2
HOH
HOH
118
B
HOH
29
2
HOH
HOH
119
B
HOH
32
2
HOH
HOH
120
B
HOH
41
2
HOH
HOH
121
B
HOH
43
2
HOH
HOH
122
B
HOH
50
2
HOH
HOH
123
B
HOH
54
2
HOH
HOH
124
B
HOH
55
2
HOH
HOH
125
B
HOH
57
2
HOH
HOH
126
B
HOH
58
2
HOH
HOH
127
B
HOH
60
2
HOH
HOH
128
B
HOH
61
2
HOH
HOH
129
B
HOH
62
2
HOH
HOH
130
B
HOH
66
2
HOH
HOH
131
B
HOH
67
2
HOH
HOH
132
B
HOH
68
2
HOH
HOH
133
B
HOH
69
2
HOH
HOH
134
B
HOH
73
2
HOH
HOH
135
B
HOH
76
2
HOH
HOH
136
B
HOH
81
2
HOH
HOH
137
B
HOH
85
2
HOH
HOH
138
B
HOH
89
2
HOH
HOH
139
B
HOH
90
2
HOH
HOH
140
B
HOH
92
2
HOH
HOH
141
B
HOH
95
2
HOH
HOH
142
B
HOH
96
2
HOH
HOH
143
B
HOH
97
2
HOH
HOH
144
B
HOH
98
2
HOH
HOH
145
B
HOH
99
2
HOH
HOH
146
B
HOH
101
2
HOH
HOH
147
B
HOH
102
2
HOH
HOH
148
B
HOH
104
2
HOH
HOH
149
B
HOH
106
2
HOH
HOH
150
B
HOH
110
2
HOH
HOH
151
B
HOH
117
2
HOH
HOH
152
B
HOH
121
2
HOH
HOH
153
B
HOH
122
2
HOH
HOH
154
B
HOH
124
2
HOH
HOH
155
B
HOH
125
2
HOH
HOH
156
B
HOH
126
2
HOH
HOH
157
B
HOH
128
2
HOH
HOH
158
B
HOH
130
2
HOH
HOH
159
B
HOH
132
2
HOH
HOH
160
B
HOH
133
2
HOH
HOH
161
B
HOH
135
2
HOH
HOH
162
B
HOH
139
2
HOH
HOH
163
B
HOH
142
2
HOH
HOH
164
B
HOH
143
2
HOH
HOH
165
B
HOH
148
2
HOH
HOH
166
B
HOH
149
2
HOH
HOH
167
B
HOH
150
2
HOH
HOH
168
B
HOH
151
2
HOH
HOH
169
B
HOH
152
2
HOH
HOH
170
B
HOH
153
2
HOH
HOH
171
B
HOH
154
2
HOH
HOH
172
B
HOH
155
2
HOH
HOH
173
B
HOH
156
2
HOH
HOH
174
B
HOH
157
2
HOH
HOH
175
B
HOH
158
2
HOH
HOH
176
B
HOH
161
2
HOH
HOH
177
B
HOH
162
2
HOH
HOH
178
B
G
1
n
1
G
1
A
G
2
n
2
G
2
A
C
3
n
3
C
3
A
G
4
n
4
G
4
A
G
5
n
5
G
5
A
C
6
n
6
C
6
A
G
7
n
7
G
7
A
G
8
n
8
G
8
A
C
9
n
9
C
9
A
G
10
n
10
G
10
A
G
11
n
11
G
11
A
C
12
n
12
C
12
A
U
13
n
13
U
13
A
G
14
n
14
G
14
A
C
15
n
15
C
15
A
U
16
n
16
U
16
A
G
17
n
17
G
17
A
C
18
n
18
C
18
A
C
19
n
19
C
19
A
G
1
n
1
G
1
B
G
2
n
2
G
2
B
C
3
n
3
C
3
B
G
4
n
4
G
4
B
G
5
n
5
G
5
B
C
6
n
6
C
6
B
G
7
n
7
G
7
B
G
8
n
8
G
8
B
C
9
n
9
C
9
B
G
10
n
10
G
10
B
G
11
n
11
G
11
B
C
12
n
12
C
12
B
U
13
n
13
U
13
B
G
14
n
14
G
14
B
C
15
n
15
C
15
B
U
16
n
16
U
16
B
G
17
n
17
G
17
B
C
18
n
18
C
18
B
C
19
n
19
C
19
B
0.8481
-0.1046
0.0608
0.5322
-0.6048
0.6914
0.0591
-0.1607
-0.1100
0.1930
0.0737
0.0503
0.0226
-0.1544
-0.1328
-0.0222
0.0054
-0.0116
-0.0668
0.0180
-0.0540
refined
-11.5977
28.3491
28.4265
X-RAY DIFFRACTION
A
1
A
19
X-RAY DIFFRACTION
1
B
1
B
19
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
2
dimeric
1970
-14
7180
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HOH
101
C
HOH
1
A
HOH
102
C
HOH
1
A
HOH
103
C
HOH
1
A
HOH
105
C
HOH
1
A
HOH
106
C
HOH
1
A
HOH
130
C
HOH
1
B
HOH
101
D
HOH
1
B
HOH
103
D
HOH
1
B
HOH
107
D
HOH
1
B
HOH
108
D
HOH
1
B
HOH
115
D
HOH
1
B
HOH
121
D
HOH
1
A
A
OP2
O
C
HOH
3
155
2.18
1
-3.80
0.50
111.90
108.10
A
A
A
C2
N3
C4
G
G
G
2
2
2
N
1
-5.73
0.90
105.70
99.97
A
A
A
O5'
P
OP2
C
C
C
3
3
3
N
1
-7.32
1.00
102.60
95.28
A
A
A
C4'
C3'
C2'
G
G
G
7
7
7
N
1
-7.60
1.10
112.00
104.40
B
B
B
N9
C1'
C2'
G
G
G
10
10
10
N
1
5.35
0.70
108.50
113.85
B
B
B
O4'
C1'
N9
G
G
G
10
10
10
N
1
A
A
P
OP3
G
G
1
1
-0.138
0.012
1.607
1.469
N
1
B
B
P
OP3
G
G
1
1
-0.130
0.012
1.607
1.477
N
1
A
A
O
O
HOH
HOH
146
146
2.05
1_555
3_465
59.970
28.382
13.980
0.4900
0.2500
0.0000
0.4900
0.0000
-0.7400
0.9480
0.9350
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2444
0.2125
0.2140
1.700
15.00
666
13498
4.9000
94.78
0.3241
0.3109
1.000
0.330
0.8192
2.5230
0.0680
0.1637
0.1474
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.1240
0.1190
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD
MASK
1.700
15.00
164
986
0
822
0
0.011
0.021
916
0.003
0.020
308
1.865
3.000
1430
1.083
3.000
806
0.074
0.200
190
0.009
0.020
402
0.001
0.020
80
0.109
0.200
90
0.260
0.200
395
0.242
0.200
323
0.059
0.200
195
0.162
0.200
92
0.063
0.200
9
0.129
0.200
37
0.273
0.200
26
1.353
3.000
1353
1.828
4.500
1430
0.1970
0.1980
1.740
48
764
812
20
78.23
1.700
20.0
4E5C
14282
13505
2
2
0.041
1.132
1
21.200
3.200
94.800
0.098
1.700
1.760
1124
1.101
1
2.1
80.4
0.115
1.760
1.830
1262
1.274
1
2.4
91.3
0.110
1.830
1.910
1368
1.317
1
3.2
97.6
0.079
1.910
2.020
1381
1.185
1
3.5
99.8
0.056
2.020
2.140
1426
1.032
1
3.5
99.9
0.044
2.140
2.310
1389
0.972
1
3.5
99.8
0.035
2.310
2.540
1419
0.877
1
3.5
99.9
0.028
2.540
2.900
1430
0.769
1
3.5
99.5
0.041
2.900
3.660
1386
1.524
1
3.3
95.7
0.036
3.660
20.00
1327
1.479
1
3.0
85.2
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Jorge Navaza
ccp4@ccp4.ac.uk
Fortran_77
http://www.ccp4.ac.uk/
AMoRE
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
ADSC
Quantum
Crystal Structure of 19mer double-helical RNA containing CUG/CGG-repeats
1
N
N
1
N
N
2
N
N
2
N
N
hydrog
WATSON-CRICK
A
G
1
A
N1
G
1
1_555
B
C
19
B
N3
C
19
1_555
hydrog
WATSON-CRICK
A
G
1
A
N2
G
1
1_555
B
C
19
B
O2
C
19
1_555
hydrog
WATSON-CRICK
A
G
1
A
O6
G
1
1_555
B
C
19
B
N4
C
19
1_555
hydrog
WATSON-CRICK
A
G
2
A
N1
G
2
1_555
B
C
18
B
N3
C
18
1_555
hydrog
WATSON-CRICK
A
G
2
A
N2
G
2
1_555
B
C
18
B
O2
C
18
1_555
hydrog
WATSON-CRICK
A
G
2
A
O6
G
2
1_555
B
C
18
B
N4
C
18
1_555
hydrog
WATSON-CRICK
A
C
3
A
N3
C
3
1_555
B
G
17
B
N1
G
17
1_555
hydrog
WATSON-CRICK
A
C
3
A
N4
C
3
1_555
B
G
17
B
O6
G
17
1_555
hydrog
WATSON-CRICK
A
C
3
A
O2
C
3
1_555
B
G
17
B
N2
G
17
1_555
hydrog
TYPE_28_PAIR
A
G
4
A
N1
G
4
1_555
B
U
16
B
O2
U
16
1_555
hydrog
TYPE_28_PAIR
A
G
4
A
O6
G
4
1_555
B
U
16
B
N3
U
16
1_555
hydrog
WATSON-CRICK
A
G
5
A
N1
G
5
1_555
B
C
15
B
N3
C
15
1_555
hydrog
WATSON-CRICK
A
G
5
A
N2
G
5
1_555
B
C
15
B
O2
C
15
1_555
hydrog
WATSON-CRICK
A
G
5
A
O6
G
5
1_555
B
C
15
B
N4
C
15
1_555
hydrog
WATSON-CRICK
A
C
6
A
N3
C
6
1_555
B
G
14
B
N1
G
14
1_555
hydrog
WATSON-CRICK
A
C
6
A
N4
C
6
1_555
B
G
14
B
O6
G
14
1_555
hydrog
WATSON-CRICK
A
C
6
A
O2
C
6
1_555
B
G
14
B
N2
G
14
1_555
hydrog
TYPE_28_PAIR
A
G
7
A
N1
G
7
1_555
B
U
13
B
O2
U
13
1_555
hydrog
TYPE_28_PAIR
A
G
7
A
O6
G
7
1_555
B
U
13
B
N3
U
13
1_555
hydrog
WATSON-CRICK
A
G
8
A
N1
G
8
1_555
B
C
12
B
N3
C
12
1_555
hydrog
WATSON-CRICK
A
G
8
A
N2
G
8
1_555
B
C
12
B
O2
C
12
1_555
hydrog
WATSON-CRICK
A
G
8
A
O6
G
8
1_555
B
C
12
B
N4
C
12
1_555
hydrog
WATSON-CRICK
A
C
9
A
N3
C
9
1_555
B
G
11
B
N1
G
11
1_555
hydrog
WATSON-CRICK
A
C
9
A
N4
C
9
1_555
B
G
11
B
O6
G
11
1_555
hydrog
WATSON-CRICK
A
C
9
A
O2
C
9
1_555
B
G
11
B
N2
G
11
1_555
hydrog
TYPE_6_PAIR
A
G
10
A
N1
G
10
1_555
B
G
10
B
O6
G
10
1_555
hydrog
TYPE_6_PAIR
A
G
10
A
N2
G
10
1_555
B
G
10
B
N7
G
10
1_555
hydrog
WATSON-CRICK
A
G
11
A
N1
G
11
1_555
B
C
9
B
N3
C
9
1_555
hydrog
WATSON-CRICK
A
G
11
A
N2
G
11
1_555
B
C
9
B
O2
C
9
1_555
hydrog
WATSON-CRICK
A
G
11
A
O6
G
11
1_555
B
C
9
B
N4
C
9
1_555
hydrog
WATSON-CRICK
A
C
12
A
N3
C
12
1_555
B
G
8
B
N1
G
8
1_555
hydrog
WATSON-CRICK
A
C
12
A
N4
C
12
1_555
B
G
8
B
O6
G
8
1_555
hydrog
WATSON-CRICK
A
C
12
A
O2
C
12
1_555
B
G
8
B
N2
G
8
1_555
hydrog
TYPE_28_PAIR
A
U
13
A
N3
U
13
1_555
B
G
7
B
O6
G
7
1_555
hydrog
TYPE_28_PAIR
A
U
13
A
O2
U
13
1_555
B
G
7
B
N1
G
7
1_555
hydrog
WATSON-CRICK
A
G
14
A
N1
G
14
1_555
B
C
6
B
N3
C
6
1_555
hydrog
WATSON-CRICK
A
G
14
A
N2
G
14
1_555
B
C
6
B
O2
C
6
1_555
hydrog
WATSON-CRICK
A
G
14
A
O6
G
14
1_555
B
C
6
B
N4
C
6
1_555
hydrog
WATSON-CRICK
A
C
15
A
N3
C
15
1_555
B
G
5
B
N1
G
5
1_555
hydrog
WATSON-CRICK
A
C
15
A
N4
C
15
1_555
B
G
5
B
O6
G
5
1_555
hydrog
WATSON-CRICK
A
C
15
A
O2
C
15
1_555
B
G
5
B
N2
G
5
1_555
hydrog
TYPE_28_PAIR
A
U
16
A
N3
U
16
1_555
B
G
4
B
O6
G
4
1_555
hydrog
TYPE_28_PAIR
A
U
16
A
O2
U
16
1_555
B
G
4
B
N1
G
4
1_555
hydrog
WATSON-CRICK
A
G
17
A
N1
G
17
1_555
B
C
3
B
N3
C
3
1_555
hydrog
WATSON-CRICK
A
G
17
A
N2
G
17
1_555
B
C
3
B
O2
C
3
1_555
hydrog
WATSON-CRICK
A
G
17
A
O6
G
17
1_555
B
C
3
B
N4
C
3
1_555
hydrog
WATSON-CRICK
A
C
18
A
N3
C
18
1_555
B
G
2
B
N1
G
2
1_555
hydrog
WATSON-CRICK
A
C
18
A
N4
C
18
1_555
B
G
2
B
O6
G
2
1_555
hydrog
WATSON-CRICK
A
C
18
A
O2
C
18
1_555
B
G
2
B
N2
G
2
1_555
hydrog
WATSON-CRICK
A
C
19
A
N3
C
19
1_555
B
G
1
B
N1
G
1
1_555
hydrog
WATSON-CRICK
A
C
19
A
N4
C
19
1_555
B
G
1
B
O6
G
1
1_555
hydrog
WATSON-CRICK
A
C
19
A
O2
C
19
1_555
B
G
1
B
N2
G
1
1_555
RNA
siRNA, trinucleotide repeat expansion, RNA
4E5C
PDB
1
1
4E5C
GGCGGCGGCGGCUGCUGCC
1
19
4E5C
1
19
4E5C
A
1
1
19
1
19
4E5C
1
19
4E5C
B
1
1
19
150
P 3 2 1