0.028063 0.000000 0.009818 0.000000 0.011138 0.000000 0.000000 0.000000 0.028550 0.00000 0.00000 0.00000 Sledz, P. Hyvonen, M. Lang, S. Stubbs, C.J. Abell, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 109.28 90.00 35.634 89.784 37.108 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C5 H12 O3 120.147 2-(2-METHOXYETHOXY)ETHANOL PEG 6000 non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C4 H10 N O6 P 199.099 n PHOSPHOTHREONINE PHOSPHONOTHREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N C N 4 N H N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N N N 29 N C N 30 N N N 31 N N N 32 N O N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N O N 55 N N N 56 N O N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 S C N 67 N C N 68 N O N 69 N C N 70 N C N 71 N O N 72 N O N 73 N O N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N N N 82 R C N 83 N C N 84 N O N 85 N C N 86 N S N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N C N 102 N O N 103 N N N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N O N 123 N O N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N N N 135 N C N 136 N C N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N C N 145 N O N 146 N C N 147 N O N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 N C Y 163 N C Y 164 N N Y 165 N C Y 166 N C Y 167 N N N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N H N 181 N H N 182 N N N 183 S C N 184 N C N 185 N O N 186 S C N 187 N C N 188 N C N 189 N C N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 S C N 206 N C N 207 N O N 208 N C N 209 N C N 210 N C N 211 N C N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N N N 227 S C N 228 N C N 229 N O N 230 N C N 231 N C N 232 N C N 233 N C N 234 N N N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N S N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 N H N 273 N H N 274 N C N 275 N O N 276 N C N 277 N C N 278 N O N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C Y 299 N C Y 300 N C Y 301 N C Y 302 N C Y 303 N C Y 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C N 322 N C N 323 N C N 324 N O N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N O N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 R C N 353 N O N 354 N C N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N N N 366 S C N 367 R C N 368 N C N 369 N O N 370 N P N 371 N O N 372 N O N 373 N O N 374 N C N 375 N O N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N N N 388 S C N 389 N C N 390 N O N 391 N C Y 392 N C Y 393 N C Y 394 N C Y 395 N N Y 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N N N 415 S C N 416 N C N 417 N O N 418 N C Y 419 N C Y 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C N 425 N O N 426 N O N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C N 443 N C N 444 N C N 445 N O N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing Y 159 N sing Y 160 N doub Y 161 N doub N 162 N sing Y 163 N sing N 164 N sing Y 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N doub N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing Y 288 N doub Y 289 N sing Y 290 N sing N 291 N sing Y 292 N doub N 293 N sing Y 294 N doub N 295 N sing Y 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N doub N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing Y 378 N doub Y 379 N sing Y 380 N sing N 381 N sing Y 382 N doub Y 383 N sing Y 384 N sing N 385 N sing Y 386 N sing Y 387 N doub N 388 N sing Y 389 N doub N 390 N sing Y 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing Y 406 N doub Y 407 N sing Y 408 N sing N 409 N sing Y 410 N doub N 411 N sing Y 412 N doub N 413 N sing Y 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing GE Angew. Chem. Int. Ed. Engl. ACIEAY 0179 1521-3773 51 7680 7683 10.1002/anie.201202660 22730171 High-throughput interrogation of ligand binding mode using a fluorescence-based assay. 2012 10.2210/pdb4e9c/pdb pdb_00004e9c 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 CCD 2010-07-14 MARMOSAIC 225 mm CCD SINGLE WAVELENGTH M x-ray 1 0.8726 1.0 ID23-2 ESRF 0.8726 SYNCHROTRON ESRF BEAMLINE ID23-2 26755.518 Serine/threonine-protein kinase PLK1 2.7.11.21 1 man polymer 1055.080 LDPPLHSpTA phosphopeptide 1 syn polymer 120.147 2-(2-METHOXYETHOXY)ETHANOL 2 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 170 nat water Polo-like kinase 1, PLK-1, Serine/threonine-protein kinase 13, STPK13 no no GPLGSPEFDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRL ILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAII LHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSR GPLGSPEFDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRL ILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAII LHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSR A polypeptide(L) no yes (ACE)LDPPLHS(TPO)A(NH2) XLDPPLHSTAX B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample PLK1, PLK 9606 Homo sapiens 562 Escherichia coli 1 2.01 38.95 VAPOR DIFFUSION, SITTING DROP 6.5 0.1 M MES pH 6.5, 30% PEG 300, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 citation citation_author chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq_dif struct_site repository Initial release Database references Other Data collection Database references Data collection Database references Derived calculations Refinement description 1 0 2012-10-10 1 1 2012-10-17 1 2 2012-12-12 1 3 2018-12-05 1 4 2023-09-13 _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-03-21 REL REL PG0 2-(2-METHOXYETHOXY)ETHANOL GOL GLYCEROL HOH water solid phase peptide synthesis sample 3P35 PDB experimental model Enzyme inhibitor LDPPLHSpTA phosphopeptide Peptide-like PG0 1 3 PG0 PG0 601 A PG0 2 3 PG0 PG0 602 A GOL 3 4 GOL GOL 101 B HOH 1 5 HOH HOH 701 A HOH 2 5 HOH HOH 702 A HOH 3 5 HOH HOH 703 A HOH 5 5 HOH HOH 704 A HOH 7 5 HOH HOH 705 A HOH 8 5 HOH HOH 706 A HOH 9 5 HOH HOH 707 A HOH 10 5 HOH HOH 708 A HOH 14 5 HOH HOH 709 A HOH 15 5 HOH HOH 710 A HOH 16 5 HOH HOH 711 A HOH 17 5 HOH HOH 712 A HOH 18 5 HOH HOH 713 A HOH 19 5 HOH HOH 714 A HOH 20 5 HOH HOH 715 A HOH 21 5 HOH HOH 716 A HOH 22 5 HOH HOH 717 A HOH 23 5 HOH HOH 718 A HOH 24 5 HOH HOH 719 A HOH 25 5 HOH HOH 720 A HOH 26 5 HOH HOH 721 A HOH 27 5 HOH HOH 722 A HOH 28 5 HOH HOH 723 A HOH 29 5 HOH HOH 724 A HOH 30 5 HOH HOH 725 A HOH 31 5 HOH HOH 726 A HOH 32 5 HOH HOH 727 A HOH 33 5 HOH HOH 728 A HOH 34 5 HOH HOH 729 A HOH 35 5 HOH HOH 730 A HOH 36 5 HOH HOH 731 A HOH 37 5 HOH HOH 732 A HOH 38 5 HOH HOH 733 A HOH 39 5 HOH HOH 734 A HOH 40 5 HOH HOH 735 A HOH 41 5 HOH HOH 736 A HOH 42 5 HOH HOH 737 A HOH 43 5 HOH HOH 738 A HOH 44 5 HOH HOH 739 A HOH 46 5 HOH HOH 740 A HOH 47 5 HOH HOH 741 A HOH 48 5 HOH HOH 742 A HOH 49 5 HOH HOH 743 A HOH 50 5 HOH HOH 744 A HOH 51 5 HOH HOH 745 A HOH 52 5 HOH HOH 746 A HOH 53 5 HOH HOH 747 A HOH 55 5 HOH HOH 748 A HOH 56 5 HOH HOH 749 A HOH 57 5 HOH HOH 750 A HOH 58 5 HOH HOH 751 A HOH 61 5 HOH HOH 752 A HOH 62 5 HOH HOH 753 A HOH 63 5 HOH HOH 754 A HOH 64 5 HOH HOH 755 A HOH 65 5 HOH HOH 756 A HOH 66 5 HOH HOH 757 A HOH 67 5 HOH HOH 758 A HOH 68 5 HOH HOH 759 A HOH 69 5 HOH HOH 760 A HOH 71 5 HOH HOH 761 A HOH 72 5 HOH HOH 762 A HOH 73 5 HOH HOH 763 A HOH 74 5 HOH HOH 764 A HOH 75 5 HOH HOH 765 A HOH 76 5 HOH HOH 766 A HOH 77 5 HOH HOH 767 A HOH 78 5 HOH HOH 768 A HOH 79 5 HOH HOH 769 A HOH 80 5 HOH HOH 770 A HOH 81 5 HOH HOH 771 A HOH 82 5 HOH HOH 772 A HOH 84 5 HOH HOH 773 A HOH 85 5 HOH HOH 774 A HOH 86 5 HOH HOH 775 A HOH 87 5 HOH HOH 776 A HOH 88 5 HOH HOH 777 A HOH 89 5 HOH HOH 778 A HOH 90 5 HOH HOH 779 A HOH 91 5 HOH HOH 780 A HOH 92 5 HOH HOH 781 A HOH 93 5 HOH HOH 782 A HOH 95 5 HOH HOH 783 A HOH 96 5 HOH HOH 784 A HOH 98 5 HOH HOH 785 A HOH 99 5 HOH HOH 786 A HOH 101 5 HOH HOH 787 A HOH 102 5 HOH HOH 788 A HOH 103 5 HOH HOH 789 A HOH 104 5 HOH HOH 790 A HOH 105 5 HOH HOH 791 A HOH 106 5 HOH HOH 792 A HOH 107 5 HOH HOH 793 A HOH 108 5 HOH HOH 794 A HOH 109 5 HOH HOH 795 A HOH 110 5 HOH HOH 796 A HOH 111 5 HOH HOH 797 A HOH 112 5 HOH HOH 798 A HOH 113 5 HOH HOH 799 A HOH 114 5 HOH HOH 800 A HOH 115 5 HOH HOH 801 A HOH 116 5 HOH HOH 802 A HOH 117 5 HOH HOH 803 A HOH 119 5 HOH HOH 804 A HOH 120 5 HOH HOH 805 A HOH 121 5 HOH HOH 806 A HOH 122 5 HOH HOH 807 A HOH 124 5 HOH HOH 808 A HOH 125 5 HOH HOH 809 A HOH 126 5 HOH HOH 810 A HOH 127 5 HOH HOH 811 A HOH 128 5 HOH HOH 812 A HOH 129 5 HOH HOH 813 A HOH 130 5 HOH HOH 814 A HOH 131 5 HOH HOH 815 A HOH 132 5 HOH HOH 816 A HOH 134 5 HOH HOH 817 A HOH 135 5 HOH HOH 818 A HOH 136 5 HOH HOH 819 A HOH 137 5 HOH HOH 820 A HOH 138 5 HOH HOH 821 A HOH 139 5 HOH HOH 822 A HOH 140 5 HOH HOH 823 A HOH 141 5 HOH HOH 824 A HOH 142 5 HOH HOH 825 A HOH 143 5 HOH HOH 826 A HOH 145 5 HOH HOH 827 A HOH 146 5 HOH HOH 828 A HOH 147 5 HOH HOH 829 A HOH 150 5 HOH HOH 830 A HOH 152 5 HOH HOH 831 A HOH 154 5 HOH HOH 832 A HOH 155 5 HOH HOH 833 A HOH 156 5 HOH HOH 834 A HOH 158 5 HOH HOH 835 A HOH 159 5 HOH HOH 836 A HOH 161 5 HOH HOH 837 A HOH 163 5 HOH HOH 838 A HOH 165 5 HOH HOH 839 A HOH 166 5 HOH HOH 840 A HOH 171 5 HOH HOH 841 A HOH 172 5 HOH HOH 842 A HOH 173 5 HOH HOH 843 A HOH 174 5 HOH HOH 844 A HOH 175 5 HOH HOH 845 A HOH 176 5 HOH HOH 846 A HOH 177 5 HOH HOH 847 A HOH 178 5 HOH HOH 848 A HOH 180 5 HOH HOH 849 A HOH 184 5 HOH HOH 850 A HOH 185 5 HOH HOH 851 A HOH 186 5 HOH HOH 852 A HOH 188 5 HOH HOH 853 A HOH 190 5 HOH HOH 854 A HOH 191 5 HOH HOH 855 A HOH 192 5 HOH HOH 856 A HOH 193 5 HOH HOH 857 A HOH 195 5 HOH HOH 858 A HOH 196 5 HOH HOH 859 A HOH 197 5 HOH HOH 860 A HOH 198 5 HOH HOH 861 A HOH 199 5 HOH HOH 862 A HOH 4 5 HOH HOH 201 B HOH 6 5 HOH HOH 202 B HOH 11 5 HOH HOH 203 B HOH 12 5 HOH HOH 204 B HOH 45 5 HOH HOH 205 B HOH 54 5 HOH HOH 206 B HOH 70 5 HOH HOH 207 B HOH 83 5 HOH HOH 208 B n 1 363 A n 2 364 A n 3 365 A n 4 366 A n 5 367 A n 6 368 A n 7 369 A n 8 370 A n 9 371 A CYS 372 n 10 CYS 372 A HIS 373 n 11 HIS 373 A LEU 374 n 12 LEU 374 A SER 375 n 13 SER 375 A ASP 376 n 14 ASP 376 A MET 377 n 15 MET 377 A LEU 378 n 16 LEU 378 A GLN 379 n 17 GLN 379 A GLN 380 n 18 GLN 380 A LEU 381 n 19 LEU 381 A HIS 382 n 20 HIS 382 A SER 383 n 21 SER 383 A VAL 384 n 22 VAL 384 A ASN 385 n 23 ASN 385 A ALA 386 n 24 ALA 386 A SER 387 n 25 SER 387 A LYS 388 n 26 LYS 388 A PRO 389 n 27 PRO 389 A SER 390 n 28 SER 390 A GLU 391 n 29 GLU 391 A ARG 392 n 30 ARG 392 A GLY 393 n 31 GLY 393 A LEU 394 n 32 LEU 394 A VAL 395 n 33 VAL 395 A ARG 396 n 34 ARG 396 A GLN 397 n 35 GLN 397 A GLU 398 n 36 GLU 398 A GLU 399 n 37 GLU 399 A ALA 400 n 38 ALA 400 A GLU 401 n 39 GLU 401 A ASP 402 n 40 ASP 402 A PRO 403 n 41 PRO 403 A ALA 404 n 42 ALA 404 A CYS 405 n 43 CYS 405 A ILE 406 n 44 ILE 406 A PRO 407 n 45 PRO 407 A ILE 408 n 46 ILE 408 A PHE 409 n 47 PHE 409 A TRP 410 n 48 TRP 410 A VAL 411 n 49 VAL 411 A SER 412 n 50 SER 412 A LYS 413 n 51 LYS 413 A TRP 414 n 52 TRP 414 A VAL 415 n 53 VAL 415 A ASP 416 n 54 ASP 416 A TYR 417 n 55 TYR 417 A SER 418 n 56 SER 418 A ASP 419 n 57 ASP 419 A LYS 420 n 58 LYS 420 A TYR 421 n 59 TYR 421 A GLY 422 n 60 GLY 422 A LEU 423 n 61 LEU 423 A GLY 424 n 62 GLY 424 A TYR 425 n 63 TYR 425 A GLN 426 n 64 GLN 426 A LEU 427 n 65 LEU 427 A CYS 428 n 66 CYS 428 A ASP 429 n 67 ASP 429 A ASN 430 n 68 ASN 430 A SER 431 n 69 SER 431 A VAL 432 n 70 VAL 432 A GLY 433 n 71 GLY 433 A VAL 434 n 72 VAL 434 A LEU 435 n 73 LEU 435 A PHE 436 n 74 PHE 436 A ASN 437 n 75 ASN 437 A ASP 438 n 76 ASP 438 A SER 439 n 77 SER 439 A THR 440 n 78 THR 440 A ARG 441 n 79 ARG 441 A LEU 442 n 80 LEU 442 A ILE 443 n 81 ILE 443 A LEU 444 n 82 LEU 444 A TYR 445 n 83 TYR 445 A ASN 446 n 84 ASN 446 A ASP 447 n 85 ASP 447 A GLY 448 n 86 GLY 448 A ASP 449 n 87 ASP 449 A SER 450 n 88 SER 450 A LEU 451 n 89 LEU 451 A GLN 452 n 90 GLN 452 A TYR 453 n 91 TYR 453 A ILE 454 n 92 ILE 454 A GLU 455 n 93 GLU 455 A ARG 456 n 94 ARG 456 A ASP 457 n 95 ASP 457 A GLY 458 n 96 GLY 458 A THR 459 n 97 THR 459 A GLU 460 n 98 GLU 460 A SER 461 n 99 SER 461 A TYR 462 n 100 TYR 462 A LEU 463 n 101 LEU 463 A THR 464 n 102 THR 464 A VAL 465 n 103 VAL 465 A SER 466 n 104 SER 466 A SER 467 n 105 SER 467 A HIS 468 n 106 HIS 468 A PRO 469 n 107 PRO 469 A ASN 470 n 108 ASN 470 A SER 471 n 109 SER 471 A LEU 472 n 110 LEU 472 A MET 473 n 111 MET 473 A LYS 474 n 112 LYS 474 A LYS 475 n 113 LYS 475 A ILE 476 n 114 ILE 476 A THR 477 n 115 THR 477 A LEU 478 n 116 LEU 478 A LEU 479 n 117 LEU 479 A LYS 480 n 118 LYS 480 A TYR 481 n 119 TYR 481 A PHE 482 n 120 PHE 482 A ARG 483 n 121 ARG 483 A ASN 484 n 122 ASN 484 A TYR 485 n 123 TYR 485 A MET 486 n 124 MET 486 A SER 487 n 125 SER 487 A GLU 488 n 126 GLU 488 A HIS 489 n 127 HIS 489 A LEU 490 n 128 LEU 490 A LEU 491 n 129 LEU 491 A LYS 492 n 130 LYS 492 A ALA 493 n 131 ALA 493 A GLY 494 n 132 GLY 494 A ALA 495 n 133 ALA 495 A ASN 496 n 134 ASN 496 A ILE 497 n 135 ILE 497 A THR 498 n 136 THR 498 A PRO 499 n 137 PRO 499 A ARG 500 n 138 ARG 500 A GLU 501 n 139 GLU 501 A GLY 502 n 140 GLY 502 A ASP 503 n 141 ASP 503 A GLU 504 n 142 GLU 504 A LEU 505 n 143 LEU 505 A ALA 506 n 144 ALA 506 A ARG 507 n 145 ARG 507 A LEU 508 n 146 LEU 508 A PRO 509 n 147 PRO 509 A TYR 510 n 148 TYR 510 A LEU 511 n 149 LEU 511 A ARG 512 n 150 ARG 512 A THR 513 n 151 THR 513 A TRP 514 n 152 TRP 514 A PHE 515 n 153 PHE 515 A ARG 516 n 154 ARG 516 A THR 517 n 155 THR 517 A ARG 518 n 156 ARG 518 A SER 519 n 157 SER 519 A ALA 520 n 158 ALA 520 A ILE 521 n 159 ILE 521 A ILE 522 n 160 ILE 522 A LEU 523 n 161 LEU 523 A HIS 524 n 162 HIS 524 A LEU 525 n 163 LEU 525 A SER 526 n 164 SER 526 A ASN 527 n 165 ASN 527 A GLY 528 n 166 GLY 528 A SER 529 n 167 SER 529 A VAL 530 n 168 VAL 530 A GLN 531 n 169 GLN 531 A ILE 532 n 170 ILE 532 A ASN 533 n 171 ASN 533 A PHE 534 n 172 PHE 534 A PHE 535 n 173 PHE 535 A GLN 536 n 174 GLN 536 A ASP 537 n 175 ASP 537 A HIS 538 n 176 HIS 538 A THR 539 n 177 THR 539 A LYS 540 n 178 LYS 540 A LEU 541 n 179 LEU 541 A ILE 542 n 180 ILE 542 A LEU 543 n 181 LEU 543 A CYS 544 n 182 CYS 544 A PRO 545 n 183 PRO 545 A LEU 546 n 184 LEU 546 A MET 547 n 185 MET 547 A ALA 548 n 186 ALA 548 A ALA 549 n 187 ALA 549 A VAL 550 n 188 VAL 550 A THR 551 n 189 THR 551 A TYR 552 n 190 TYR 552 A ILE 553 n 191 ILE 553 A ASP 554 n 192 ASP 554 A GLU 555 n 193 GLU 555 A LYS 556 n 194 LYS 556 A ARG 557 n 195 ARG 557 A ASP 558 n 196 ASP 558 A PHE 559 n 197 PHE 559 A ARG 560 n 198 ARG 560 A THR 561 n 199 THR 561 A TYR 562 n 200 TYR 562 A ARG 563 n 201 ARG 563 A LEU 564 n 202 LEU 564 A SER 565 n 203 SER 565 A LEU 566 n 204 LEU 566 A LEU 567 n 205 LEU 567 A GLU 568 n 206 GLU 568 A GLU 569 n 207 GLU 569 A TYR 570 n 208 TYR 570 A GLY 571 n 209 GLY 571 A CYS 572 n 210 CYS 572 A CYS 573 n 211 CYS 573 A LYS 574 n 212 LYS 574 A GLU 575 n 213 GLU 575 A LEU 576 n 214 LEU 576 A ALA 577 n 215 ALA 577 A SER 578 n 216 SER 578 A ARG 579 n 217 ARG 579 A LEU 580 n 218 LEU 580 A ARG 581 n 219 ARG 581 A TYR 582 n 220 TYR 582 A ALA 583 n 221 ALA 583 A ARG 584 n 222 ARG 584 A THR 585 n 223 THR 585 A MET 586 n 224 MET 586 A VAL 587 n 225 VAL 587 A ASP 588 n 226 ASP 588 A LYS 589 n 227 LYS 589 A LEU 590 n 228 LEU 590 A LEU 591 n 229 LEU 591 A SER 592 n 230 SER 592 A SER 593 n 231 SER 593 A ARG 594 n 232 ARG 594 A n 1 70 B n 2 71 B n 3 72 B PRO 73 n 4 PRO 73 B PRO 74 n 5 PRO 74 B LEU 75 n 6 LEU 75 B HIS 76 n 7 HIS 76 B SER 77 n 8 SER 77 B TPO 78 n 9 TPO 78 B ALA 79 n 10 ALA 79 B NH2 80 n 11 NH2 80 B 0.8038 0.2856 0.2650 0.8776 0.4960 1.5273 0.0282 0.0217 0.0380 0.0253 -0.0279 0.0127 0.0288 0.0432 -0.0003 0.0127 0.0091 0.0240 0.0122 0.0191 0.0676 refined 11.7300 0.4870 4.2080 X-RAY DIFFRACTION A 380 A 585 X-RAY DIFFRACTION 1 author_and_software_defined_assembly PISA 2 dimeric 1140 -8 11330 B TPO 78 PHOSPHOTHREONINE B TPO 9 THR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 415 A N VAL 53 A O GLY 424 A O GLY 62 A N LEU 423 A N LEU 61 A O LEU 435 A O LEU 73 A N VAL 432 A N VAL 70 A O LEU 444 A O LEU 82 A N ARG 441 A N ARG 79 A O ILE 454 A O ILE 92 A N LEU 451 A N LEU 89 A O LEU 463 A O LEU 101 A N PHE 515 A N PHE 153 A O ILE 522 A O ILE 160 A N LEU 523 A N LEU 161 A O GLN 531 A O GLN 169 A N VAL 530 A N VAL 168 A O LEU 543 A O LEU 181 A N LYS 540 A N LYS 178 A O ILE 553 A O ILE 191 A N VAL 550 A N VAL 188 A O TYR 562 A O TYR 200 1 A SG CYS 372 A SG CYS 10 1 Y 1 A CG GLU 398 A CG GLU 36 1 Y 1 A CD GLU 398 A CD GLU 36 1 Y 1 A OE1 GLU 398 A OE1 GLU 36 1 Y 1 A OE2 GLU 398 A OE2 GLU 36 1 Y 1 A CG LYS 420 A CG LYS 58 1 Y 1 A CD LYS 420 A CD LYS 58 1 Y 1 A CE LYS 420 A CE LYS 58 1 Y 1 A NZ LYS 420 A NZ LYS 58 1 Y 1 A CG ARG 456 A CG ARG 94 1 Y 1 A CD ARG 456 A CD ARG 94 1 Y 1 A NE ARG 456 A NE ARG 94 1 Y 1 A CZ ARG 456 A CZ ARG 94 1 Y 1 A NH1 ARG 456 A NH1 ARG 94 1 Y 1 A NH2 ARG 456 A NH2 ARG 94 1 Y 1 A CG ASP 503 A CG ASP 141 1 Y 1 A OD1 ASP 503 A OD1 ASP 141 1 Y 1 A OD2 ASP 503 A OD2 ASP 141 1 Y 1 A CG GLU 504 A CG GLU 142 1 Y 1 A CD GLU 504 A CD GLU 142 1 Y 1 A OE1 GLU 504 A OE1 GLU 142 1 Y 1 A OE2 GLU 504 A OE2 GLU 142 1 Y 1 A CG GLU 555 A CG GLU 193 1 Y 1 A CD GLU 555 A CD GLU 193 1 Y 1 A OE1 GLU 555 A OE1 GLU 193 1 Y 1 A OE2 GLU 555 A OE2 GLU 193 1 Y 1 A GLY 363 A GLY 1 1 Y 1 A PRO 364 A PRO 2 1 Y 1 A LEU 365 A LEU 3 1 Y 1 A GLY 366 A GLY 4 1 Y 1 A SER 367 A SER 5 1 Y 1 A PRO 368 A PRO 6 1 Y 1 A GLU 369 A GLU 7 1 Y 1 A PHE 370 A PHE 8 1 Y 1 A ASP 371 A ASP 9 1 Y 1 B ACE 70 B ACE 1 1 Y 1 B LEU 71 B LEU 2 1 Y 1 B ASP 72 B ASP 3 1 Y 1 A LYS 420 -137.60 -42.30 1 A TYR 421 -123.04 -52.70 1 A ASP 449 -141.91 -48.48 1 A HIS 468 61.05 67.33 16.617 0.948 0.926 0.23209 0.19235 0.19436 1.70 44.89 1235 22978 5.1 99.24 4.357 0.079 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.125 0.121 0.80 0.80 1.40 3p35 MAXIMUM LIKELIHOOD MASK 1.70 44.89 170 2036 22 0 1844 0.007 0.021 1952 1.084 1.979 2648 5.337 5.000 245 32.417 22.644 87 15.554 15.000 339 20.620 15.000 17 0.074 0.200 295 0.003 0.021 1454 0.474 1.500 1176 0.927 2.000 1901 1.418 3.000 776 2.439 4.500 738 1.70 44.89 4E9C 24458 24213 2.0 1 99 phasing MOLREP refinement REFMAC 5.5.0109 data reduction XDS data scaling XDS The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1) in complex with LDPPLHSpTA phosphopeptide 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 5 N N A HIS 373 A HIS 11 HELX_P A SER 387 A SER 25 1 1 15 A LYS 388 A LYS 26 HELX_P A ARG 392 A ARG 30 5 2 5 A ARG 396 A ARG 34 HELX_P A GLU 401 A GLU 39 5 3 6 A ASP 402 A ASP 40 HELX_P A ILE 406 A ILE 44 5 4 5 A SER 466 A SER 104 HELX_P A HIS 468 A HIS 106 5 5 3 A PRO 469 A PRO 107 HELX_P A SER 471 A SER 109 5 6 3 A LEU 472 A LEU 110 HELX_P A LEU 490 A LEU 128 1 7 19 A LEU 564 A LEU 202 HELX_P A GLY 571 A GLY 209 1 8 8 A CYS 573 A CYS 211 HELX_P A SER 593 A SER 231 1 9 21 covale 1.330 both B SER 77 B C SER 8 1_555 B TPO 78 B N TPO 9 1_555 covale 1.333 both B TPO 78 B C TPO 9 1_555 B ALA 79 B N ALA 10 1_555 covale 1.264 both B ALA 79 B C ALA 10 1_555 B NH2 80 B N NH2 11 1_555 TRANSFERASE/TRANSFERASE INHIBITOR serine/threonine kinase, transferase, phosphoprotein binding domain, TRANSFERASE-TRANSFERASE INHIBITOR complex PLK1_HUMAN UNP 1 371 P53350 DCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDS LQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSV QINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSR 4E9C PDB 2 1 4E9C XLDPPLHSTAX 371 594 4E9C 371 594 P53350 A 1 9 232 70 80 4E9C 70 80 4E9C B 2 1 11 1 expression tag GLY 363 4E9C A P53350 UNP 1 1 expression tag PRO 364 4E9C A P53350 UNP 2 1 expression tag LEU 365 4E9C A P53350 UNP 3 1 expression tag GLY 366 4E9C A P53350 UNP 4 1 expression tag SER 367 4E9C A P53350 UNP 5 1 expression tag PRO 368 4E9C A P53350 UNP 6 1 expression tag GLU 369 4E9C A P53350 UNP 7 1 expression tag PHE 370 4E9C A P53350 UNP 8 6 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 411 A VAL 49 A ASP 416 A ASP 54 A GLY 422 A GLY 60 A LEU 427 A LEU 65 A VAL 432 A VAL 70 A PHE 436 A PHE 74 A ARG 441 A ARG 79 A LEU 444 A LEU 82 A SER 450 A SER 88 A ILE 454 A ILE 92 A GLU 460 A GLU 98 A THR 464 A THR 102 A LEU 511 A LEU 149 A ARG 516 A ARG 154 A ALA 520 A ALA 158 A LEU 525 A LEU 163 A VAL 530 A VAL 168 A PHE 534 A PHE 172 A LYS 540 A LYS 178 A CYS 544 A CYS 182 A ALA 549 A ALA 187 A ILE 553 A ILE 191 A PHE 559 A PHE 197 A ARG 563 A ARG 201 BINDING SITE FOR RESIDUE PG0 A 601 A PG0 601 Software 4 BINDING SITE FOR RESIDUE PG0 A 602 A PG0 602 Software 2 BINDING SITE FOR RESIDUE GOL B 101 B GOL 101 Software 7 BINDING SITE FOR CHAIN B OF LDPPLHSPTA PHOSPHOPEPTIDE Software 25 A TYR 417 A TYR 55 4 1_555 A TYR 481 A TYR 119 4 1_555 A PHE 482 A PHE 120 4 1_555 A TYR 485 A TYR 123 4 1_555 A ASP 376 A ASP 14 2 1_555 A GLN 380 A GLN 18 2 1_555 A THR 459 A THR 97 7 1_556 A GLU 460 A GLU 98 7 1_556 A PHE 535 A PHE 173 7 1_555 A HIS 538 A HIS 176 7 1_555 B PRO 74 B PRO 5 7 1_555 B HIS 76 B HIS 7 7 1_555 B TPO 78 B TPO 9 7 1_555 A LYS 413 A LYS 51 25 1_555 A TRP 414 A TRP 52 25 1_555 A VAL 415 A VAL 53 25 1_555 A ASP 416 A ASP 54 25 1_555 A THR 459 A THR 97 25 1_556 A SER 461 A SER 99 25 1_556 A TYR 462 A TYR 100 25 1_556 A TYR 485 A TYR 123 25 1_555 A HIS 489 A HIS 127 25 1_555 A LEU 490 A LEU 128 25 1_555 A LEU 491 A LEU 129 25 1_555 A ARG 516 A ARG 154 25 1_555 A THR 517 A THR 155 25 1_555 A PHE 535 A PHE 173 25 1_555 A HIS 538 A HIS 176 25 1_555 A LYS 540 A LYS 178 25 1_555 A HOH 702 F HOH 25 1_555 A HOH 738 F HOH 25 1_556 B GOL 101 E GOL 25 1_555 B HOH 201 G HOH 25 1_555 B HOH 202 G HOH 25 1_555 B HOH 203 G HOH 25 1_555 B HOH 204 G HOH 25 1_555 B HOH 205 G HOH 25 1_555 B HOH 207 G HOH 25 1_555 4 P 1 21 1