0.008780 0.000000 0.000000 0.000000 0.008780 0.000000 0.000000 0.000000 0.013295 0.000000 0.000000 0.000000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 113.892 113.892 75.219 C10 H22 O6 238.278 PENTAETHYLENE GLYCOL PEG400 non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of a putative iron-regulated protein A precursor (BDI_2603) from Parabacteroides distasonis ATCC 8503 at 2.30 A resolution 10.2210/pdb4ecg/pdb pdb_00004ecg 100 1 double crystal monochromator CCD 2012-01-13 MARMOSAIC 325 mm CCD double crystal MAD M x-ray 1 0.91837 1.0 0.97949 1.0 BL9-2 SSRL 0.91837,0.97949 SYNCHROTRON SSRL BEAMLINE BL9-2 41876.543 Putative iron-regulated protein A 1 man polymer 35.453 CHLORIDE ION 1 syn non-polymer 40.078 CALCIUM ION 9 syn non-polymer 238.278 PENTAETHYLENE GLYCOL 1 syn non-polymer 18.015 water 114 nat water no yes GNDDPGKDPDVVTYDFKNLPADSGAKPTEDQ(MSE)SAVVATFVDEVALPTYKD(MSE)LTK(MSE)TAYKNAVDKFIAS GSKNDLADACDAWRAVRVPWEQSEAFLFGVADLAQLDPSLDSWPLDKNGIEEIIATGEFSKISGAVDEDAEDGPQNLRGF HTAEK(MSE)LFLDGEPRDLETSPFAKNELEYLKLVSER(MSE)LSDTQDLYNGWLKGLGTSDVPSSYAEA(MSE)KKHD GSAYSIGNVYQAIEL(MSE)LNGNNG(MSE)AGISNEVGSAKITDPVTAWNGSNKDATDPNNPGVLAVESWYSWNSLDDY KNNIVSIKNAYFGGRDLDEESASESSLHALTK(MSE)INPTLDSL(MSE)VVQIDKTIDAINAIGYPFRNNLGDTEHINT ATEACADLTTGLGVVKSKFTN GNDDPGKDPDVVTYDFKNLPADSGAKPTEDQMSAVVATFVDEVALPTYKDMLTKMTAYKNAVDKFIASGSKNDLADACDA WRAVRVPWEQSEAFLFGVADLAQLDPSLDSWPLDKNGIEEIIATGEFSKISGAVDEDAEDGPQNLRGFHTAEKMLFLDGE PRDLETSPFAKNELEYLKLVSERMLSDTQDLYNGWLKGLGTSDVPSSYAEAMKKHDGSAYSIGNVYQAIELMLNGNNGMA GISNEVGSAKITDPVTAWNGSNKDATDPNNPGVLAVESWYSWNSLDDYKNNIVSIKNAYFGGRDLDEESASESSLHALTK MINPTLDSLMVVQIDKTIDAINAIGYPFRNNLGDTEHINTATEACADLTTGLGVVKSKFTN A JCSG-394678 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ATCC 8503 sample BDI_2603 435591 Parabacteroides distasonis ATCC 8503 562 Escherichia Coli PB1 Plasmid SpeedET 1 2.91 57.77 VAPOR DIFFUSION, SITTING DROP 7.5 40.00% polyethylene glycol 400, 0.200M calcium acetate, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI:Biology software citation_author database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Refinement description Database references Database references Derived calculations 1 0 2012-04-11 1 1 2017-11-15 1 2 2018-01-24 1 3 2023-02-01 _software.classification _software.name _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2012-03-26 REL REL CL CHLORIDE ION CA CALCIUM ION 1PE PENTAETHYLENE GLYCOL HOH water THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 24-403 OF THE TARGET SEQUENCE. CL 500 2 CL CL 500 A CA 501 3 CA CA 501 A CA 502 3 CA CA 502 A CA 503 3 CA CA 503 A CA 504 3 CA CA 504 A CA 505 3 CA CA 505 A CA 506 3 CA CA 506 A CA 507 3 CA CA 507 A CA 508 3 CA CA 508 A CA 509 3 CA CA 509 A 1PE 510 4 1PE 1PE 510 A HOH 511 5 HOH HOH 601 A HOH 512 5 HOH HOH 602 A HOH 513 5 HOH HOH 603 A HOH 514 5 HOH HOH 604 A HOH 515 5 HOH HOH 605 A HOH 516 5 HOH HOH 606 A HOH 517 5 HOH HOH 607 A HOH 518 5 HOH HOH 608 A HOH 519 5 HOH HOH 609 A HOH 520 5 HOH HOH 610 A HOH 521 5 HOH HOH 611 A HOH 522 5 HOH HOH 612 A HOH 523 5 HOH HOH 613 A HOH 524 5 HOH HOH 614 A HOH 525 5 HOH HOH 615 A HOH 526 5 HOH HOH 616 A HOH 527 5 HOH HOH 617 A HOH 528 5 HOH HOH 618 A HOH 529 5 HOH HOH 619 A HOH 530 5 HOH HOH 620 A HOH 531 5 HOH HOH 621 A HOH 532 5 HOH HOH 622 A HOH 533 5 HOH HOH 623 A HOH 534 5 HOH HOH 624 A HOH 535 5 HOH HOH 625 A HOH 536 5 HOH HOH 626 A HOH 537 5 HOH HOH 627 A HOH 538 5 HOH HOH 628 A HOH 539 5 HOH HOH 629 A HOH 540 5 HOH HOH 630 A HOH 541 5 HOH HOH 631 A HOH 542 5 HOH HOH 632 A HOH 543 5 HOH HOH 633 A HOH 544 5 HOH HOH 634 A HOH 545 5 HOH HOH 635 A HOH 546 5 HOH HOH 636 A HOH 547 5 HOH HOH 637 A HOH 548 5 HOH HOH 638 A HOH 549 5 HOH HOH 639 A HOH 550 5 HOH HOH 640 A HOH 551 5 HOH HOH 641 A HOH 552 5 HOH HOH 642 A HOH 553 5 HOH HOH 643 A HOH 554 5 HOH HOH 644 A HOH 555 5 HOH HOH 645 A HOH 556 5 HOH HOH 646 A HOH 557 5 HOH HOH 647 A HOH 558 5 HOH HOH 648 A HOH 559 5 HOH HOH 649 A HOH 560 5 HOH HOH 650 A HOH 561 5 HOH HOH 651 A HOH 562 5 HOH HOH 652 A HOH 563 5 HOH HOH 653 A HOH 564 5 HOH HOH 654 A HOH 565 5 HOH HOH 655 A HOH 566 5 HOH HOH 656 A HOH 567 5 HOH HOH 657 A HOH 568 5 HOH HOH 658 A HOH 569 5 HOH HOH 659 A HOH 570 5 HOH HOH 660 A HOH 571 5 HOH HOH 661 A HOH 572 5 HOH HOH 662 A HOH 573 5 HOH HOH 663 A HOH 574 5 HOH HOH 664 A HOH 575 5 HOH HOH 665 A HOH 576 5 HOH HOH 666 A HOH 577 5 HOH HOH 667 A HOH 578 5 HOH HOH 668 A HOH 579 5 HOH HOH 669 A HOH 580 5 HOH HOH 670 A HOH 581 5 HOH HOH 671 A HOH 582 5 HOH HOH 672 A HOH 583 5 HOH HOH 673 A HOH 584 5 HOH HOH 674 A HOH 585 5 HOH HOH 675 A HOH 586 5 HOH HOH 676 A HOH 587 5 HOH HOH 677 A HOH 588 5 HOH HOH 678 A HOH 589 5 HOH HOH 679 A HOH 590 5 HOH HOH 680 A HOH 591 5 HOH HOH 681 A HOH 592 5 HOH HOH 682 A HOH 593 5 HOH HOH 683 A HOH 594 5 HOH HOH 684 A HOH 595 5 HOH HOH 685 A HOH 596 5 HOH HOH 686 A HOH 597 5 HOH HOH 687 A HOH 598 5 HOH HOH 688 A HOH 599 5 HOH HOH 689 A HOH 600 5 HOH HOH 690 A HOH 601 5 HOH HOH 691 A HOH 602 5 HOH HOH 692 A HOH 603 5 HOH HOH 693 A HOH 604 5 HOH HOH 694 A HOH 605 5 HOH HOH 695 A HOH 606 5 HOH HOH 696 A HOH 607 5 HOH HOH 697 A HOH 608 5 HOH HOH 698 A HOH 609 5 HOH HOH 699 A HOH 610 5 HOH HOH 700 A HOH 611 5 HOH HOH 701 A HOH 612 5 HOH HOH 702 A HOH 613 5 HOH HOH 703 A HOH 614 5 HOH HOH 704 A HOH 615 5 HOH HOH 705 A HOH 616 5 HOH HOH 706 A HOH 617 5 HOH HOH 707 A HOH 618 5 HOH HOH 708 A HOH 619 5 HOH HOH 709 A HOH 620 5 HOH HOH 710 A HOH 621 5 HOH HOH 711 A HOH 622 5 HOH HOH 712 A HOH 623 5 HOH HOH 713 A HOH 624 5 HOH HOH 714 A n 1 0 A n 2 24 A n 3 25 A n 4 26 A n 5 27 A n 6 28 A n 7 29 A n 8 30 A n 9 31 A n 10 32 A n 11 33 A n 12 34 A THR 35 n 13 THR 35 A TYR 36 n 14 TYR 36 A ASP 37 n 15 ASP 37 A PHE 38 n 16 PHE 38 A LYS 39 n 17 LYS 39 A ASN 40 n 18 ASN 40 A LEU 41 n 19 LEU 41 A PRO 42 n 20 PRO 42 A ALA 43 n 21 ALA 43 A ASP 44 n 22 ASP 44 A SER 45 n 23 SER 45 A GLY 46 n 24 GLY 46 A ALA 47 n 25 ALA 47 A LYS 48 n 26 LYS 48 A PRO 49 n 27 PRO 49 A THR 50 n 28 THR 50 A GLU 51 n 29 GLU 51 A ASP 52 n 30 ASP 52 A GLN 53 n 31 GLN 53 A MSE 54 n 32 MSE 54 A SER 55 n 33 SER 55 A ALA 56 n 34 ALA 56 A VAL 57 n 35 VAL 57 A VAL 58 n 36 VAL 58 A ALA 59 n 37 ALA 59 A THR 60 n 38 THR 60 A PHE 61 n 39 PHE 61 A VAL 62 n 40 VAL 62 A ASP 63 n 41 ASP 63 A GLU 64 n 42 GLU 64 A VAL 65 n 43 VAL 65 A ALA 66 n 44 ALA 66 A LEU 67 n 45 LEU 67 A PRO 68 n 46 PRO 68 A THR 69 n 47 THR 69 A TYR 70 n 48 TYR 70 A LYS 71 n 49 LYS 71 A ASP 72 n 50 ASP 72 A MSE 73 n 51 MSE 73 A LEU 74 n 52 LEU 74 A THR 75 n 53 THR 75 A LYS 76 n 54 LYS 76 A MSE 77 n 55 MSE 77 A THR 78 n 56 THR 78 A ALA 79 n 57 ALA 79 A TYR 80 n 58 TYR 80 A LYS 81 n 59 LYS 81 A ASN 82 n 60 ASN 82 A ALA 83 n 61 ALA 83 A VAL 84 n 62 VAL 84 A ASP 85 n 63 ASP 85 A LYS 86 n 64 LYS 86 A PHE 87 n 65 PHE 87 A ILE 88 n 66 ILE 88 A ALA 89 n 67 ALA 89 A SER 90 n 68 SER 90 A GLY 91 n 69 GLY 91 A SER 92 n 70 SER 92 A LYS 93 n 71 LYS 93 A ASN 94 n 72 ASN 94 A ASP 95 n 73 ASP 95 A LEU 96 n 74 LEU 96 A ALA 97 n 75 ALA 97 A ASP 98 n 76 ASP 98 A ALA 99 n 77 ALA 99 A CYS 100 n 78 CYS 100 A ASP 101 n 79 ASP 101 A ALA 102 n 80 ALA 102 A TRP 103 n 81 TRP 103 A ARG 104 n 82 ARG 104 A ALA 105 n 83 ALA 105 A VAL 106 n 84 VAL 106 A ARG 107 n 85 ARG 107 A VAL 108 n 86 VAL 108 A PRO 109 n 87 PRO 109 A TRP 110 n 88 TRP 110 A GLU 111 n 89 GLU 111 A GLN 112 n 90 GLN 112 A SER 113 n 91 SER 113 A GLU 114 n 92 GLU 114 A ALA 115 n 93 ALA 115 A PHE 116 n 94 PHE 116 A LEU 117 n 95 LEU 117 A PHE 118 n 96 PHE 118 A GLY 119 n 97 GLY 119 A VAL 120 n 98 VAL 120 A ALA 121 n 99 ALA 121 A ASP 122 n 100 ASP 122 A LEU 123 n 101 LEU 123 A ALA 124 n 102 ALA 124 A GLN 125 n 103 GLN 125 A LEU 126 n 104 LEU 126 A ASP 127 n 105 ASP 127 A PRO 128 n 106 PRO 128 A SER 129 n 107 SER 129 A LEU 130 n 108 LEU 130 A ASP 131 n 109 ASP 131 A SER 132 n 110 SER 132 A TRP 133 n 111 TRP 133 A PRO 134 n 112 PRO 134 A LEU 135 n 113 LEU 135 A ASP 136 n 114 ASP 136 A LYS 137 n 115 LYS 137 A ASN 138 n 116 ASN 138 A GLY 139 n 117 GLY 139 A ILE 140 n 118 ILE 140 A GLU 141 n 119 GLU 141 A GLU 142 n 120 GLU 142 A ILE 143 n 121 ILE 143 A ILE 144 n 122 ILE 144 A ALA 145 n 123 ALA 145 A THR 146 n 124 THR 146 A GLY 147 n 125 GLY 147 A GLU 148 n 126 GLU 148 A PHE 149 n 127 PHE 149 A SER 150 n 128 SER 150 A LYS 151 n 129 LYS 151 A ILE 152 n 130 ILE 152 A SER 153 n 131 SER 153 A GLY 154 n 132 GLY 154 A ALA 155 n 133 ALA 155 A VAL 156 n 134 VAL 156 A ASP 157 n 135 ASP 157 A GLU 158 n 136 GLU 158 A ASP 159 n 137 ASP 159 A ALA 160 n 138 ALA 160 A GLU 161 n 139 GLU 161 A ASP 162 n 140 ASP 162 A GLY 163 n 141 GLY 163 A PRO 164 n 142 PRO 164 A GLN 165 n 143 GLN 165 A ASN 166 n 144 ASN 166 A LEU 167 n 145 LEU 167 A ARG 168 n 146 ARG 168 A GLY 169 n 147 GLY 169 A PHE 170 n 148 PHE 170 A HIS 171 n 149 HIS 171 A THR 172 n 150 THR 172 A ALA 173 n 151 ALA 173 A GLU 174 n 152 GLU 174 A LYS 175 n 153 LYS 175 A MSE 176 n 154 MSE 176 A LEU 177 n 155 LEU 177 A PHE 178 n 156 PHE 178 A LEU 179 n 157 LEU 179 A ASP 180 n 158 ASP 180 A GLY 181 n 159 GLY 181 A GLU 182 n 160 GLU 182 A PRO 183 n 161 PRO 183 A ARG 184 n 162 ARG 184 A ASP 185 n 163 ASP 185 A LEU 186 n 164 LEU 186 A GLU 187 n 165 GLU 187 A THR 188 n 166 THR 188 A SER 189 n 167 SER 189 A PRO 190 n 168 PRO 190 A PHE 191 n 169 PHE 191 A ALA 192 n 170 ALA 192 A LYS 193 n 171 LYS 193 A ASN 194 n 172 ASN 194 A GLU 195 n 173 GLU 195 A LEU 196 n 174 LEU 196 A GLU 197 n 175 GLU 197 A TYR 198 n 176 TYR 198 A LEU 199 n 177 LEU 199 A LYS 200 n 178 LYS 200 A LEU 201 n 179 LEU 201 A VAL 202 n 180 VAL 202 A SER 203 n 181 SER 203 A GLU 204 n 182 GLU 204 A ARG 205 n 183 ARG 205 A MSE 206 n 184 MSE 206 A LEU 207 n 185 LEU 207 A SER 208 n 186 SER 208 A ASP 209 n 187 ASP 209 A THR 210 n 188 THR 210 A GLN 211 n 189 GLN 211 A ASP 212 n 190 ASP 212 A LEU 213 n 191 LEU 213 A TYR 214 n 192 TYR 214 A ASN 215 n 193 ASN 215 A GLY 216 n 194 GLY 216 A TRP 217 n 195 TRP 217 A LEU 218 n 196 LEU 218 A LYS 219 n 197 LYS 219 A GLY 220 n 198 GLY 220 A LEU 221 n 199 LEU 221 A GLY 222 n 200 GLY 222 A THR 223 n 201 THR 223 A SER 224 n 202 SER 224 A ASP 225 n 203 ASP 225 A VAL 226 n 204 VAL 226 A PRO 227 n 205 PRO 227 A SER 228 n 206 SER 228 A SER 229 n 207 SER 229 A TYR 230 n 208 TYR 230 A ALA 231 n 209 ALA 231 A GLU 232 n 210 GLU 232 A ALA 233 n 211 ALA 233 A MSE 234 n 212 MSE 234 A LYS 235 n 213 LYS 235 A LYS 236 n 214 LYS 236 A HIS 237 n 215 HIS 237 A ASP 238 n 216 ASP 238 A GLY 239 n 217 GLY 239 A SER 240 n 218 SER 240 A ALA 241 n 219 ALA 241 A TYR 242 n 220 TYR 242 A SER 243 n 221 SER 243 A ILE 244 n 222 ILE 244 A GLY 245 n 223 GLY 245 A ASN 246 n 224 ASN 246 A VAL 247 n 225 VAL 247 A TYR 248 n 226 TYR 248 A GLN 249 n 227 GLN 249 A ALA 250 n 228 ALA 250 A ILE 251 n 229 ILE 251 A GLU 252 n 230 GLU 252 A LEU 253 n 231 LEU 253 A MSE 254 n 232 MSE 254 A LEU 255 n 233 LEU 255 A ASN 256 n 234 ASN 256 A GLY 257 n 235 GLY 257 A ASN 258 n 236 ASN 258 A ASN 259 n 237 ASN 259 A GLY 260 n 238 GLY 260 A MSE 261 n 239 MSE 261 A ALA 262 n 240 ALA 262 A GLY 263 n 241 GLY 263 A ILE 264 n 242 ILE 264 A SER 265 n 243 SER 265 A ASN 266 n 244 ASN 266 A GLU 267 n 245 GLU 267 A VAL 268 n 246 VAL 268 A GLY 269 n 247 GLY 269 A SER 270 n 248 SER 270 A ALA 271 n 249 ALA 271 A LYS 272 n 250 LYS 272 A ILE 273 n 251 ILE 273 A THR 274 n 252 THR 274 A ASP 275 n 253 ASP 275 A PRO 276 n 254 PRO 276 A VAL 277 n 255 VAL 277 A THR 278 n 256 THR 278 A ALA 279 n 257 ALA 279 A TRP 280 n 258 TRP 280 A ASN 281 n 259 ASN 281 A GLY 282 n 260 GLY 282 A SER 283 n 261 SER 283 A ASN 284 n 262 ASN 284 A LYS 285 n 263 LYS 285 A ASP 286 n 264 ASP 286 A ALA 287 n 265 ALA 287 A THR 288 n 266 THR 288 A ASP 289 n 267 ASP 289 A PRO 290 n 268 PRO 290 A ASN 291 n 269 ASN 291 A ASN 292 n 270 ASN 292 A PRO 293 n 271 PRO 293 A GLY 294 n 272 GLY 294 A VAL 295 n 273 VAL 295 A LEU 296 n 274 LEU 296 A ALA 297 n 275 ALA 297 A VAL 298 n 276 VAL 298 A GLU 299 n 277 GLU 299 A SER 300 n 278 SER 300 A TRP 301 n 279 TRP 301 A TYR 302 n 280 TYR 302 A SER 303 n 281 SER 303 A TRP 304 n 282 TRP 304 A ASN 305 n 283 ASN 305 A SER 306 n 284 SER 306 A LEU 307 n 285 LEU 307 A ASP 308 n 286 ASP 308 A ASP 309 n 287 ASP 309 A TYR 310 n 288 TYR 310 A LYS 311 n 289 LYS 311 A ASN 312 n 290 ASN 312 A ASN 313 n 291 ASN 313 A ILE 314 n 292 ILE 314 A VAL 315 n 293 VAL 315 A SER 316 n 294 SER 316 A ILE 317 n 295 ILE 317 A LYS 318 n 296 LYS 318 A ASN 319 n 297 ASN 319 A ALA 320 n 298 ALA 320 A TYR 321 n 299 TYR 321 A PHE 322 n 300 PHE 322 A GLY 323 n 301 GLY 323 A GLY 324 n 302 GLY 324 A ARG 325 n 303 ARG 325 A ASP 326 n 304 ASP 326 A LEU 327 n 305 LEU 327 A ASP 328 n 306 ASP 328 A GLU 329 n 307 GLU 329 A GLU 330 n 308 GLU 330 A SER 331 n 309 SER 331 A ALA 332 n 310 ALA 332 A SER 333 n 311 SER 333 A GLU 334 n 312 GLU 334 A SER 335 n 313 SER 335 A SER 336 n 314 SER 336 A LEU 337 n 315 LEU 337 A HIS 338 n 316 HIS 338 A ALA 339 n 317 ALA 339 A LEU 340 n 318 LEU 340 A THR 341 n 319 THR 341 A LYS 342 n 320 LYS 342 A MSE 343 n 321 MSE 343 A ILE 344 n 322 ILE 344 A ASN 345 n 323 ASN 345 A PRO 346 n 324 PRO 346 A THR 347 n 325 THR 347 A LEU 348 n 326 LEU 348 A ASP 349 n 327 ASP 349 A SER 350 n 328 SER 350 A LEU 351 n 329 LEU 351 A MSE 352 n 330 MSE 352 A VAL 353 n 331 VAL 353 A VAL 354 n 332 VAL 354 A GLN 355 n 333 GLN 355 A ILE 356 n 334 ILE 356 A ASP 357 n 335 ASP 357 A LYS 358 n 336 LYS 358 A THR 359 n 337 THR 359 A ILE 360 n 338 ILE 360 A ASP 361 n 339 ASP 361 A ALA 362 n 340 ALA 362 A ILE 363 n 341 ILE 363 A ASN 364 n 342 ASN 364 A ALA 365 n 343 ALA 365 A ILE 366 n 344 ILE 366 A GLY 367 n 345 GLY 367 A TYR 368 n 346 TYR 368 A PRO 369 n 347 PRO 369 A PHE 370 n 348 PHE 370 A ARG 371 n 349 ARG 371 A ASN 372 n 350 ASN 372 A ASN 373 n 351 ASN 373 A LEU 374 n 352 LEU 374 A GLY 375 n 353 GLY 375 A ASP 376 n 354 ASP 376 A THR 377 n 355 THR 377 A GLU 378 n 356 GLU 378 A HIS 379 n 357 HIS 379 A ILE 380 n 358 ILE 380 A ASN 381 n 359 ASN 381 A THR 382 n 360 THR 382 A ALA 383 n 361 ALA 383 A THR 384 n 362 THR 384 A GLU 385 n 363 GLU 385 A ALA 386 n 364 ALA 386 A CYS 387 n 365 CYS 387 A ALA 388 n 366 ALA 388 A ASP 389 n 367 ASP 389 A LEU 390 n 368 LEU 390 A THR 391 n 369 THR 391 A THR 392 n 370 THR 392 A GLY 393 n 371 GLY 393 A LEU 394 n 372 LEU 394 A GLY 395 n 373 GLY 395 A VAL 396 n 374 VAL 396 A VAL 397 n 375 VAL 397 A LYS 398 n 376 LYS 398 A SER 399 n 377 SER 399 A LYS 400 n 378 LYS 400 A PHE 401 n 379 PHE 401 A THR 402 n 380 THR 402 A n 381 403 A 1.6260 0.3090 -0.0060 1.8716 0.4868 0.5646 0.1774 -0.0891 -0.2982 0.0537 -0.0663 -0.0822 -0.0104 -0.0928 -0.1111 0.0467 0.0021 -0.0685 0.0491 0.0452 0.1603 refined 96.6520 3.7100 5.9930 X-RAY DIFFRACTION A 35 A 402 X-RAY DIFFRACTION 1 author_defined_assembly 1 monomeric A GLU 114 A OE2 GLU 92 1_555 A CA 504 F CA CA 1_555 A ASP 131 A OD2 ASP 109 1_555 101.8 A GLU 114 A OE2 GLU 92 1_555 A CA 504 F CA CA 1_555 A GLU 299 A OE2 GLU 277 1_555 166.8 A ASP 131 A OD2 ASP 109 1_555 A CA 504 F CA CA 1_555 A GLU 299 A OE2 GLU 277 1_555 81.7 A GLU 114 A OE2 GLU 92 1_555 A CA 504 F CA CA 1_555 A HOH 616 M O HOH 1_555 110.6 A ASP 131 A OD2 ASP 109 1_555 A CA 504 F CA CA 1_555 A HOH 616 M O HOH 1_555 119.9 A GLU 299 A OE2 GLU 277 1_555 A CA 504 F CA CA 1_555 A HOH 616 M O HOH 1_555 57.5 A TRP 133 A O TRP 111 1_555 A CA 509 K CA CA 1_555 A HOH 708 M O HOH 1_555 67.6 A TRP 133 A O TRP 111 1_555 A CA 509 K CA CA 1_555 A HOH 709 M O HOH 1_555 74.8 A HOH 708 M O HOH 1_555 A CA 509 K CA CA 1_555 A HOH 709 M O HOH 1_555 79.9 A TRP 133 A O TRP 111 1_555 A CA 509 K CA CA 1_555 A HOH 710 M O HOH 1_555 86.9 A HOH 708 M O HOH 1_555 A CA 509 K CA CA 1_555 A HOH 710 M O HOH 1_555 139.5 A HOH 709 M O HOH 1_555 A CA 509 K CA CA 1_555 A HOH 710 M O HOH 1_555 124.5 A ASP 157 A OD1 ASP 135 1_555 A CA 505 G CA CA 1_555 A ASP 159 A OD1 ASP 137 1_555 64.1 A ASP 157 A OD1 ASP 135 1_555 A CA 505 G CA CA 1_555 A HOH 680 M O HOH 1_555 88.0 A ASP 159 A OD1 ASP 137 1_555 A CA 505 G CA CA 1_555 A HOH 680 M O HOH 1_555 60.0 A ASP 157 A OD1 ASP 135 1_555 A CA 505 G CA CA 1_555 A HOH 692 M O HOH 1_555 70.3 A ASP 159 A OD1 ASP 137 1_555 A CA 505 G CA CA 1_555 A HOH 692 M O HOH 1_555 69.6 A HOH 680 M O HOH 1_555 A CA 505 G CA CA 1_555 A HOH 692 M O HOH 1_555 129.5 A GLU 182 A OE1 GLU 160 1_555 A CA 507 I CA CA 1_555 A HOH 617 M O HOH 1_555 76.8 A GLU 182 A OE1 GLU 160 1_555 A CA 507 I CA CA 1_555 A HOH 700 M O HOH 1_555 72.7 A HOH 617 M O HOH 1_555 A CA 507 I CA CA 1_555 A HOH 700 M O HOH 1_555 62.5 A GLU 182 A OE1 GLU 160 1_555 A CA 507 I CA CA 1_555 A HOH 701 M O HOH 1_555 172.0 A HOH 617 M O HOH 1_555 A CA 507 I CA CA 1_555 A HOH 701 M O HOH 1_555 101.5 A HOH 700 M O HOH 1_555 A CA 507 I CA CA 1_555 A HOH 701 M O HOH 1_555 99.6 A GLU 182 A OE2 GLU 160 1_555 A CA 508 J CA CA 1_555 A HOH 711 M O HOH 1_555 124.5 A GLU 182 A OE2 GLU 160 1_555 A CA 508 J CA CA 1_555 A HOH 712 M O HOH 1_555 97.1 A HOH 711 M O HOH 1_555 A CA 508 J CA CA 1_555 A HOH 712 M O HOH 1_555 119.9 A GLU 182 A OE2 GLU 160 1_555 A CA 508 J CA CA 1_555 A HOH 713 M O HOH 1_555 76.7 A HOH 711 M O HOH 1_555 A CA 508 J CA CA 1_555 A HOH 713 M O HOH 1_555 116.9 A HOH 712 M O HOH 1_555 A CA 508 J CA CA 1_555 A HOH 713 M O HOH 1_555 113.2 A ASP 185 A OD1 ASP 163 1_555 A CA 502 D CA CA 1_555 A ASP 185 A OD2 ASP 163 1_555 50.0 A ASP 185 A OD1 ASP 163 1_555 A CA 502 D CA CA 1_555 A GLU 187 A OE1 GLU 165 1_555 107.5 A ASP 185 A OD2 ASP 163 1_555 A CA 502 D CA CA 1_555 A GLU 187 A OE1 GLU 165 1_555 83.1 A ASP 185 A OD1 ASP 163 1_555 A CA 502 D CA CA 1_555 A HOH 624 M O HOH 1_555 88.4 A ASP 185 A OD2 ASP 163 1_555 A CA 502 D CA CA 1_555 A HOH 624 M O HOH 1_555 52.9 A GLU 187 A OE1 GLU 165 1_555 A CA 502 D CA CA 1_555 A HOH 624 M O HOH 1_555 104.5 A ASP 185 A OD1 ASP 163 1_555 A CA 502 D CA CA 1_555 A HOH 689 M O HOH 1_555 175.4 A ASP 185 A OD2 ASP 163 1_555 A CA 502 D CA CA 1_555 A HOH 689 M O HOH 1_555 132.9 A GLU 187 A OE1 GLU 165 1_555 A CA 502 D CA CA 1_555 A HOH 689 M O HOH 1_555 77.0 A HOH 624 M O HOH 1_555 A CA 502 D CA CA 1_555 A HOH 689 M O HOH 1_555 91.6 A ASP 185 A OD1 ASP 163 1_555 A CA 502 D CA CA 1_555 A HOH 690 M O HOH 1_555 85.2 A ASP 185 A OD2 ASP 163 1_555 A CA 502 D CA CA 1_555 A HOH 690 M O HOH 1_555 126.4 A GLU 187 A OE1 GLU 165 1_555 A CA 502 D CA CA 1_555 A HOH 690 M O HOH 1_555 85.2 A HOH 624 M O HOH 1_555 A CA 502 D CA CA 1_555 A HOH 690 M O HOH 1_555 169.6 A HOH 689 M O HOH 1_555 A CA 502 D CA CA 1_555 A HOH 690 M O HOH 1_555 94.2 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 A GLN 249 A OE1 GLN 227 1_555 87.8 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 A HOH 676 M O HOH 1_555 94.7 A GLN 249 A OE1 GLN 227 1_555 A CA 501 C CA CA 1_555 A HOH 676 M O HOH 1_555 177.1 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 A HOH 678 M O HOH 1_555 143.8 A GLN 249 A OE1 GLN 227 1_555 A CA 501 C CA CA 1_555 A HOH 678 M O HOH 1_555 83.3 A HOH 676 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 678 M O HOH 1_555 95.6 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 A HOH 679 M O HOH 1_555 70.2 A GLN 249 A OE1 GLN 227 1_555 A CA 501 C CA CA 1_555 A HOH 679 M O HOH 1_555 88.7 A HOH 676 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 679 M O HOH 1_555 90.7 A HOH 678 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 679 M O HOH 1_555 144.1 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 A HOH 686 M O HOH 1_555 143.6 A GLN 249 A OE1 GLN 227 1_555 A CA 501 C CA CA 1_555 A HOH 686 M O HOH 1_555 94.1 A HOH 676 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 686 M O HOH 1_555 83.1 A HOH 678 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 686 M O HOH 1_555 72.3 A HOH 679 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 686 M O HOH 1_555 73.4 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 73.1 A GLN 249 A OE1 GLN 227 1_555 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 95.6 A HOH 676 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 86.6 A HOH 678 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 73.0 A HOH 679 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 142.9 A HOH 686 M O HOH 1_555 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 142.4 A SER 270 A O SER 248 1_555 A CA 506 H CA CA 1_555 A ASP 275 A OD1 ASP 253 1_555 77.8 A SER 270 A O SER 248 1_555 A CA 506 H CA CA 1_555 A HOH 670 M O HOH 1_555 94.6 A ASP 275 A OD1 ASP 253 1_555 A CA 506 H CA CA 1_555 A HOH 670 M O HOH 1_555 107.0 A SER 270 A O SER 248 1_555 A CA 506 H CA CA 1_555 A HOH 671 M O HOH 1_555 148.8 A ASP 275 A OD1 ASP 253 1_555 A CA 506 H CA CA 1_555 A HOH 671 M O HOH 1_555 80.0 A HOH 670 M O HOH 1_555 A CA 506 H CA CA 1_555 A HOH 671 M O HOH 1_555 71.4 A SER 270 A O SER 248 1_555 A CA 506 H CA CA 1_555 A HOH 672 M O HOH 1_555 106.2 A ASP 275 A OD1 ASP 253 1_555 A CA 506 H CA CA 1_555 A HOH 672 M O HOH 1_555 172.4 A HOH 670 M O HOH 1_555 A CA 506 H CA CA 1_555 A HOH 672 M O HOH 1_555 79.4 A HOH 671 M O HOH 1_555 A CA 506 H CA CA 1_555 A HOH 672 M O HOH 1_555 98.6 A HOH 673 M O HOH 1_555 A CA 503 E CA CA 1_555 A HOH 674 M O HOH 1_555 81.3 A HOH 673 M O HOH 1_555 A CA 503 E CA CA 1_555 A HOH 691 M O HOH 1_555 74.2 A HOH 674 M O HOH 1_555 A CA 503 E CA CA 1_555 A HOH 691 M O HOH 1_555 62.9 A MSE 54 SELENOMETHIONINE A MSE 32 MET A MSE 73 SELENOMETHIONINE A MSE 51 MET A MSE 77 SELENOMETHIONINE A MSE 55 MET A MSE 176 SELENOMETHIONINE A MSE 154 MET A MSE 206 SELENOMETHIONINE A MSE 184 MET A MSE 234 SELENOMETHIONINE A MSE 212 MET A MSE 254 SELENOMETHIONINE A MSE 232 MET A MSE 261 SELENOMETHIONINE A MSE 239 MET A MSE 343 SELENOMETHIONINE A MSE 321 MET A MSE 352 SELENOMETHIONINE A MSE 330 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 179 A N LEU 157 A O GLU 182 A O GLU 160 1 A HOH 655 M HOH 1 A GLY 0 A GLY 1 1 Y 1 A ASN 24 A ASN 2 1 Y 1 A ASP 25 A ASP 3 1 Y 1 A ASP 26 A ASP 4 1 Y 1 A PRO 27 A PRO 5 1 Y 1 A GLY 28 A GLY 6 1 Y 1 A LYS 29 A LYS 7 1 Y 1 A ASP 30 A ASP 8 1 Y 1 A PRO 31 A PRO 9 1 Y 1 A ASP 32 A ASP 10 1 Y 1 A VAL 33 A VAL 11 1 Y 1 A VAL 34 A VAL 12 1 Y 1 A ASN 403 A ASN 381 1 Y 1 14.05 2.30 111.70 125.75 A A A CD CE NZ LYS LYS LYS 193 193 193 N 1 6.11 0.90 118.30 124.41 A A A CB CG OD1 ASP ASP ASP 361 361 361 N 1 A A CG CD2 HIS HIS 237 237 0.055 0.009 1.354 1.409 N 1 A ALA 66 -60.12 -71.39 1 A GLN 112 -69.33 4.97 1 A ASP 131 -157.89 44.42 1 A ASP 180 33.19 55.74 1 A LYS 219 -140.62 -0.39 1 A HIS 237 33.78 49.92 1 A ASN 259 -145.22 17.79 1 A ALA 271 -103.29 -60.18 1 A SER 331 -140.26 14.64 1 A PHE 401 -149.88 29.73 129.420 55.4796 34.300 -1.4000 0.0000 0.0000 -1.4000 0.0000 2.8100 0.9710 0.9640 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. CALCIUM (CA) AND PEG400 (1PE) FROM THE CRYSTALLIZATION SOLUTION ARE MODELED. 0.1927 0.1617 0.1632 2.3000 29.124 1097 21391 5.1000 99.4500 1.000 0.500 11.1600 0.1340 RANDOM 1 THROUGHOUT 0.000 MAD 0.2240 0.1720 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD WITH PHASES BABINET MODEL WITH MASK 2.3000 29.124 114 2955 26 0 2815 0.017 0.020 2886 0.002 0.020 1883 1.697 1.959 3916 1.037 3.000 4637 6.147 5.000 367 35.318 26.288 132 15.491 15.000 473 12.948 15.000 7 0.095 0.200 435 0.008 0.021 3253 0.001 0.020 538 0.3150 0.2650 2.3590 87 1430 1517 20 98.7600 52.286 2.30 29.124 4ECG 21402 -3.000 0.044 1 11.970 98.100 0.486 2.300 2.380 1.8 8379 3936 1 96.400 0.344 2.380 2.480 2.5 9596 4452 1 99.300 0.271 2.480 2.590 3.3 8742 4038 1 99.300 0.185 2.590 2.730 4.7 9134 4223 1 99.000 0.132 2.730 2.900 6.4 8996 4148 1 99.200 0.084 2.900 3.120 9.8 8916 4105 1 99.100 0.053 3.120 3.430 14.5 8930 4124 1 98.100 0.034 3.430 3.930 21.2 8951 4123 1 97.100 0.027 3.930 4.930 26.8 8690 4025 1 96.800 0.022 4.930 29.3 8876 4104 1 96.100 model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing Eric de La Fortelle sharp-develop@globalphasing.com http://www.globalphasing.com/sharp/ SHARP package data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package December 29, 2011 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.6.0117 data reduction XDS phasing SHELXD Crystal structure of a putative iron-regulated protein A precursor (BDI_2603) from Parabacteroides distasonis ATCC 8503 at 2.30 A resolution 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 5 N N CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. A THR 50 A THR 28 HELX_P A VAL 65 A VAL 43 1 1 16 A VAL 65 A VAL 43 HELX_P A GLY 91 A GLY 69 1 2 27 A SER 92 A SER 70 HELX_P A GLN 112 A GLN 90 1 3 21 A SER 113 A SER 91 HELX_P A LEU 117 A LEU 95 5 4 5 A GLY 119 A GLY 97 HELX_P A ALA 124 A ALA 102 1 5 6 A GLN 125 A GLN 103 HELX_P A SER 132 A SER 110 1 6 8 A ASP 136 A ASP 114 HELX_P A GLY 147 A GLY 125 1 7 12 A GLU 148 A GLU 126 HELX_P A SER 153 A SER 131 5 8 6 A GLY 163 A GLY 141 HELX_P A LEU 167 A LEU 145 5 9 5 A ARG 168 A ARG 146 HELX_P A LEU 177 A LEU 155 1 10 10 A ALA 192 A ALA 170 HELX_P A LYS 219 A LYS 197 1 11 28 A SER 229 A SER 207 HELX_P A HIS 237 A HIS 215 1 12 9 A ASN 246 A ASN 224 HELX_P A ASN 256 A ASN 234 1 13 11 A GLY 260 A GLY 238 HELX_P A ALA 271 A ALA 249 1 14 12 A ILE 273 A ILE 251 HELX_P A GLY 282 A GLY 260 1 15 10 A ASN 292 A ASN 270 HELX_P A VAL 298 A VAL 276 1 16 7 A ASN 305 A ASN 283 HELX_P A GLY 323 A GLY 301 1 17 19 A ASP 328 A ASP 306 HELX_P A ALA 332 A ALA 310 5 18 5 A SER 336 A SER 314 HELX_P A ASN 345 A ASN 323 1 19 10 A ASN 345 A ASN 323 HELX_P A ILE 366 A ILE 344 1 20 22 A PRO 369 A PRO 347 HELX_P A ASN 373 A ASN 351 5 21 5 A ASP 376 A ASP 354 HELX_P A LYS 400 A LYS 378 1 22 25 covale 1.325 both A GLN 53 A C GLN 31 1_555 A MSE 54 A N MSE 32 1_555 covale 1.336 both A MSE 54 A C MSE 32 1_555 A SER 55 A N SER 33 1_555 covale 1.331 both A ASP 72 A C ASP 50 1_555 A MSE 73 A N MSE 51 1_555 covale 1.337 both A MSE 73 A C MSE 51 1_555 A LEU 74 A N LEU 52 1_555 covale 1.343 both A LYS 76 A C LYS 54 1_555 A MSE 77 A N MSE 55 1_555 covale 1.303 both A MSE 77 A C MSE 55 1_555 A THR 78 A N THR 56 1_555 covale 1.330 both A LYS 175 A C LYS 153 1_555 A MSE 176 A N MSE 154 1_555 covale 1.334 both A MSE 176 A C MSE 154 1_555 A LEU 177 A N LEU 155 1_555 covale 1.338 both A ARG 205 A C ARG 183 1_555 A MSE 206 A N MSE 184 1_555 covale 1.341 both A MSE 206 A C MSE 184 1_555 A LEU 207 A N LEU 185 1_555 covale 1.343 both A ALA 233 A C ALA 211 1_555 A MSE 234 A N MSE 212 1_555 covale 1.342 both A MSE 234 A C MSE 212 1_555 A LYS 235 A N LYS 213 1_555 covale 1.334 both A LEU 253 A C LEU 231 1_555 A MSE 254 A N MSE 232 1_555 covale 1.345 both A MSE 254 A C MSE 232 1_555 A LEU 255 A N LEU 233 1_555 covale 1.330 both A GLY 260 A C GLY 238 1_555 A MSE 261 A N MSE 239 1_555 covale 1.336 both A MSE 261 A C MSE 239 1_555 A ALA 262 A N ALA 240 1_555 covale 1.333 both A LYS 342 A C LYS 320 1_555 A MSE 343 A N MSE 321 1_555 covale 1.337 both A MSE 343 A C MSE 321 1_555 A ILE 344 A N ILE 322 1_555 covale 1.339 both A LEU 351 A C LEU 329 1_555 A MSE 352 A N MSE 330 1_555 covale 1.328 both A MSE 352 A C MSE 330 1_555 A VAL 353 A N VAL 331 1_555 metalc 2.748 A GLU 114 A OE2 GLU 92 1_555 A CA 504 F CA CA 1_555 metalc 2.545 A ASP 131 A OD2 ASP 109 1_555 A CA 504 F CA CA 1_555 metalc 2.333 A TRP 133 A O TRP 111 1_555 A CA 509 K CA CA 1_555 metalc 2.696 A ASP 157 A OD1 ASP 135 1_555 A CA 505 G CA CA 1_555 metalc 2.969 A ASP 159 A OD1 ASP 137 1_555 A CA 505 G CA CA 1_555 metalc 2.678 A GLU 182 A OE1 GLU 160 1_555 A CA 507 I CA CA 1_555 metalc 3.198 A GLU 182 A OE2 GLU 160 1_555 A CA 508 J CA CA 1_555 metalc 2.342 A ASP 185 A OD1 ASP 163 1_555 A CA 502 D CA CA 1_555 metalc 2.886 A ASP 185 A OD2 ASP 163 1_555 A CA 502 D CA CA 1_555 metalc 2.277 A GLU 187 A OE1 GLU 165 1_555 A CA 502 D CA CA 1_555 metalc 2.345 A SER 243 A O SER 221 1_555 A CA 501 C CA CA 1_555 metalc 2.224 A GLN 249 A OE1 GLN 227 1_555 A CA 501 C CA CA 1_555 metalc 2.645 A SER 270 A O SER 248 1_555 A CA 506 H CA CA 1_555 metalc 2.578 A ASP 275 A OD1 ASP 253 1_555 A CA 506 H CA CA 1_555 metalc 3.010 A GLU 299 A OE2 GLU 277 1_555 A CA 504 F CA CA 1_555 metalc 2.436 A CA 501 C CA CA 1_555 A HOH 676 M O HOH 1_555 metalc 2.347 A CA 501 C CA CA 1_555 A HOH 678 M O HOH 1_555 metalc 2.610 A CA 501 C CA CA 1_555 A HOH 679 M O HOH 1_555 metalc 2.332 A CA 501 C CA CA 1_555 A HOH 686 M O HOH 1_555 metalc 2.653 A CA 501 C CA CA 1_555 A HOH 688 M O HOH 1_555 metalc 2.229 A CA 502 D CA CA 1_555 A HOH 624 M O HOH 1_555 metalc 2.271 A CA 502 D CA CA 1_555 A HOH 689 M O HOH 1_555 metalc 2.633 A CA 502 D CA CA 1_555 A HOH 690 M O HOH 1_555 metalc 2.803 A CA 503 E CA CA 1_555 A HOH 673 M O HOH 1_555 metalc 2.883 A CA 503 E CA CA 1_555 A HOH 674 M O HOH 1_555 metalc 2.401 A CA 503 E CA CA 1_555 A HOH 691 M O HOH 1_555 metalc 3.065 A CA 504 F CA CA 1_555 A HOH 616 M O HOH 1_555 metalc 2.457 A CA 505 G CA CA 1_555 A HOH 680 M O HOH 1_555 metalc 2.197 A CA 505 G CA CA 1_555 A HOH 692 M O HOH 1_555 metalc 2.753 A CA 506 H CA CA 1_555 A HOH 670 M O HOH 1_555 metalc 2.485 A CA 506 H CA CA 1_555 A HOH 671 M O HOH 1_555 metalc 2.453 A CA 506 H CA CA 1_555 A HOH 672 M O HOH 1_555 metalc 2.609 A CA 507 I CA CA 1_555 A HOH 617 M O HOH 1_555 metalc 2.475 A CA 507 I CA CA 1_555 A HOH 700 M O HOH 1_555 metalc 2.767 A CA 507 I CA CA 1_555 A HOH 701 M O HOH 1_555 metalc 2.479 A CA 508 J CA CA 1_555 A HOH 711 M O HOH 1_555 metalc 2.786 A CA 508 J CA CA 1_555 A HOH 712 M O HOH 1_555 metalc 2.546 A CA 508 J CA CA 1_555 A HOH 713 M O HOH 1_555 metalc 2.397 A CA 509 K CA CA 1_555 A HOH 708 M O HOH 1_555 metalc 2.454 A CA 509 K CA CA 1_555 A HOH 709 M O HOH 1_555 metalc 2.448 A CA 509 K CA CA 1_555 A HOH 710 M O HOH 1_555 HYDROLASE Imelysin-like protein, putative metalloendopeptidase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, HYDROLASE A TRP 133 A TRP 111 1 A PRO 134 A PRO 112 -7.34 A TYR 368 A TYR 346 1 A PRO 369 A PRO 347 -5.87 A6LF58_PARD8 UNP 1 24 A6LF58 NDDPGKDPDVVTYDFKNLPADSGAKPTEDQMSAVVATFVDEVALPTYKDMLTKMTAYKNAVDKFIASGSKNDLADACDAW RAVRVPWEQSEAFLFGVADLAQLDPSLDSWPLDKNGIEEIIATGEFSKISGAVDEDAEDGPQNLRGFHTAEKMLFLDGEP RDLETSPFAKNELEYLKLVSERMLSDTQDLYNGWLKGLGTSDVPSSYAEAMKKHDGSAYSIGNVYQAIELMLNGNNGMAG ISNEVGSAKITDPVTAWNGSNKDATDPNNPGVLAVESWYSWNSLDDYKNNIVSIKNAYFGGRDLDEESASESSLHALTKM INPTLDSLMVVQIDKTIDAINAIGYPFRNNLGDTEHINTATEACADLTTGLGVVKSKFTN 24 403 4ECG 24 403 A6LF58 A 1 2 381 1 expression tag GLY 0 4ECG A A6LF58 UNP 1 2 anti-parallel A PHE 178 A PHE 156 A LEU 179 A LEU 157 A GLU 182 A GLU 160 A PRO 183 A PRO 161 BINDING SITE FOR RESIDUE CL A 500 A CL 500 Software 5 BINDING SITE FOR RESIDUE CA A 501 A CA 501 Software 7 BINDING SITE FOR RESIDUE CA A 502 A CA 502 Software 6 BINDING SITE FOR RESIDUE CA A 503 A CA 503 Software 5 BINDING SITE FOR RESIDUE CA A 504 A CA 504 Software 7 BINDING SITE FOR RESIDUE CA A 505 A CA 505 Software 4 BINDING SITE FOR RESIDUE CA A 506 A CA 506 Software 5 BINDING SITE FOR RESIDUE CA A 507 A CA 507 Software 5 BINDING SITE FOR RESIDUE CA A 508 A CA 508 Software 5 BINDING SITE FOR RESIDUE CA A 509 A CA 509 Software 4 BINDING SITE FOR RESIDUE 1PE A 510 A 1PE 510 Software 4 A TRP 304 A TRP 282 5 1_555 A SER 306 A SER 284 5 1_555 A LEU 307 A LEU 285 5 1_555 A PRO 369 A PRO 347 5 1_555 A PHE 370 A PHE 348 5 1_555 A SER 243 A SER 221 7 1_555 A GLN 249 A GLN 227 7 1_555 A HOH 676 M HOH 7 1_555 A HOH 678 M HOH 7 1_555 A HOH 679 M HOH 7 1_555 A HOH 686 M HOH 7 1_555 A HOH 688 M HOH 7 1_555 A ASP 185 A ASP 163 6 1_555 A GLU 187 A GLU 165 6 1_555 A GLU 330 A GLU 308 6 6_755 A HOH 624 M HOH 6 1_555 A HOH 689 M HOH 6 1_555 A HOH 690 M HOH 6 1_555 A LYS 193 A LYS 171 5 4_564 A CA 504 F CA 5 1_555 A HOH 673 M HOH 5 1_555 A HOH 674 M HOH 5 1_555 A HOH 691 M HOH 5 1_555 A GLU 111 A GLU 89 7 1_555 A GLU 114 A GLU 92 7 1_555 A ASP 131 A ASP 109 7 1_555 A LYS 272 A LYS 250 7 1_555 A GLU 299 A GLU 277 7 1_555 A CA 503 E CA 7 1_555 A HOH 616 M HOH 7 1_555 A ASP 157 A ASP 135 4 1_555 A ASP 159 A ASP 137 4 1_555 A HOH 680 M HOH 4 1_555 A HOH 692 M HOH 4 1_555 A SER 270 A SER 248 5 1_555 A ASP 275 A ASP 253 5 1_555 A HOH 670 M HOH 5 1_555 A HOH 671 M HOH 5 1_555 A HOH 672 M HOH 5 1_555 A GLU 182 A GLU 160 5 1_555 A ASP 328 A ASP 306 5 6_755 A HOH 617 M HOH 5 1_555 A HOH 700 M HOH 5 1_555 A HOH 701 M HOH 5 1_555 A GLU 182 A GLU 160 5 1_555 A HOH 711 M HOH 5 1_555 A HOH 712 M HOH 5 1_555 A HOH 713 M HOH 5 1_555 A HOH 714 M HOH 5 1_555 A TRP 133 A TRP 111 4 1_555 A HOH 708 M HOH 4 1_555 A HOH 709 M HOH 4 1_555 A HOH 710 M HOH 4 1_555 A GLU 141 A GLU 119 4 1_555 A LYS 175 A LYS 153 4 1_555 A GLU 195 A GLU 173 4 1_555 A HOH 698 M HOH 4 1_555 80 I 41