0.010123
0.005844
0.000000
0.000000
0.011689
0.000000
0.000000
0.000000
0.012131
0.00000
0.00000
0.00000
Nakamura, T.
Zhao, Y.
Yang, W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
98.786
98.786
82.431
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
Y
299
N
C
Y
300
N
N
Y
301
N
C
Y
302
N
C
Y
303
N
N
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
S
C
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
N
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
N
392
N
C
N
393
N
S
N
394
N
C
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
N
435
N
C
N
436
N
C
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
N
C
N
452
N
O
N
453
N
O
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
N
N
462
S
C
N
463
N
C
N
464
N
O
N
465
R
C
N
466
N
O
N
467
N
C
N
468
N
O
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
N
N
479
S
C
N
480
N
C
N
481
N
O
N
482
N
C
Y
483
N
C
Y
484
N
C
Y
485
N
C
Y
486
N
N
Y
487
N
C
Y
488
N
C
Y
489
N
C
Y
490
N
C
Y
491
N
C
N
492
N
O
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
N
N
506
S
C
N
507
N
C
N
508
N
O
N
509
N
C
Y
510
N
C
Y
511
N
C
Y
512
N
C
Y
513
N
C
Y
514
N
C
Y
515
N
C
N
516
N
O
N
517
N
O
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
N
N
530
S
C
N
531
N
C
N
532
N
O
N
533
N
C
N
534
N
C
N
535
N
C
N
536
N
O
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
sing
Y
303
N
doub
Y
304
N
doub
N
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
doub
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
Y
410
N
doub
Y
411
N
sing
Y
412
N
sing
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
doub
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
doub
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
Y
479
N
doub
Y
480
N
sing
Y
481
N
sing
N
482
N
sing
Y
483
N
doub
Y
484
N
sing
Y
485
N
sing
N
486
N
sing
Y
487
N
sing
Y
488
N
doub
N
489
N
sing
Y
490
N
doub
N
491
N
sing
Y
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
doub
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
Y
507
N
doub
Y
508
N
sing
Y
509
N
sing
N
510
N
sing
Y
511
N
doub
N
512
N
sing
Y
513
N
doub
N
514
N
sing
Y
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
doub
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
UK
Nature
NATUAS
0006
0028-0836
487
196
201
10.1038/nature11181
22785315
Watching DNA polymerase eta make a phosphodiester bond
2012
10.2210/pdb4ed6/pdb
pdb_00004ed6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
95
1
CCD
2011-05-27
RIGAKU SATURN A200
SINGLE WAVELENGTH
M
x-ray
1
1.0
ROTATING ANODE
RIGAKU MICROMAX-007 HF
48617.707
DNA polymerase eta
2.7.7.7
Catalytic core (UNP RESIDUES 1-432)
1
man
polymer
3637.391
DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3')
1
syn
polymer
2739.824
DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3')
1
syn
polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
225
nat
water
RAD30 homolog A, Xeroderma pigmentosum variant type protein
no
no
GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLL
AQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTA
EETVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTL
VSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPK
TIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSH
DAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSAS
GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLL
AQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTA
EETVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTL
VSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPK
TIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSH
DAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSAS
A
polypeptide(L)
no
no
(DC)(DA)(DT)(DT)(DA)(DT)(DG)(DA)(DC)(DG)(DC)(DT)
CATTATGACGCT
T
polydeoxyribonucleotide
no
no
(DA)(DG)(DC)(DG)(DT)(DC)(DA)(DT)(DA)
AGCGTCATA
P
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
POLH, RAD30, RAD30A, XPV
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)PLYSS
PLASMID
PET28
1
2.11
41.74
VAPOR DIFFUSION, HANGING DROP
6.0
0.1M MES, 6-17%(W/V) PEG 2K-MME, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
-8.064
4
24
T
4
P
9
-90.459
T_DT4:DA9_P
1
-61.942
3.984
-1.937
-2.131
-18.869
1
20
T
5
P
8
6.580
T_DA5:DT8_P
2
-0.204
-0.317
-0.349
-0.047
-4.309
1
20
T
6
P
7
1.728
T_DT6:DA7_P
3
-14.588
-0.044
0.247
0.022
-8.184
1
19
T
7
P
6
1.663
T_DG7:DC6_P
4
-6.101
-0.230
-0.032
-0.065
-0.291
1
20
T
8
P
5
0.018
T_DA8:DT5_P
5
-3.913
0.638
-0.155
-0.237
1.614
1
19
T
9
P
4
0.699
T_DC9:DG4_P
6
-3.509
0.028
-0.293
-0.325
-5.322
1
19
T
10
P
3
0.732
T_DG10:DC3_P
7
-3.988
-0.285
-0.266
-0.225
-3.068
1
19
T
11
P
2
-0.107
T_DC11:DG2_P
8
-4.231
0.251
0.012
-0.136
19.088
1
20
T
12
P
1
6.217
T_DT12:DA1_P
9
2.310
-0.079
-0.316
-0.018
3.433
32.496
T
T
4
5
-59.489
P
P
9
8
3.120
-27.169
4.490
-0.723
TT_DT4DA5:DT8DA9_PP
1
10.152
-22.228
14.815
5.373
-5.534
2.815
25.668
T
T
5
6
4.312
P
P
8
7
3.088
1.892
0.453
-0.586
TT_DA5DT6:DA7DT8_PP
2
-6.730
15.337
24.713
-1.810
-2.767
2.692
31.167
T
T
6
7
19.233
P
P
7
6
3.321
10.121
-0.058
-1.312
TT_DT6DG7:DC6DA7_PP
3
4.346
-8.258
29.201
-4.276
0.895
3.184
35.356
T
T
7
8
5.672
P
P
6
5
3.290
3.438
-0.304
-0.769
TT_DG7DA8:DT5DC6_PP
4
1.811
-2.987
35.149
-1.770
0.766
3.370
26.526
T
T
8
9
3.450
P
P
5
4
3.396
1.579
0.677
-1.252
TT_DA8DC9:DG4DT5_PP
5
2.856
-6.240
26.328
-3.160
-0.693
3.633
36.407
T
T
9
10
4.609
P
P
4
3
3.686
2.876
-0.381
-0.743
TT_DC9DG10:DC3DG4_PP
6
-1.882
3.016
36.250
-1.637
0.316
3.342
35.610
T
T
10
11
-1.512
P
P
3
2
3.333
-0.924
-0.277
-0.731
TT_DG10DC11:DG2DC3_PP
7
0.884
-1.446
35.588
-1.057
0.584
2.958
25.978
T
T
11
12
7.956
P
P
2
1
2.971
3.566
0.600
0.052
TT_DC11DT12:DA1DG2_PP
8
0.340
-0.758
25.734
-0.779
-1.250
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2012-07-11
1
1
2012-07-25
1
2
2024-03-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2012-03-27
REL
REL
GOL
GLYCEROL
HOH
water
GOL
436
4
GOL
GOL
501
A
GOL
439
4
GOL
GOL
502
A
HOH
1
5
HOH
HOH
601
A
HOH
2
5
HOH
HOH
602
A
HOH
4
5
HOH
HOH
603
A
HOH
5
5
HOH
HOH
604
A
HOH
7
5
HOH
HOH
605
A
HOH
8
5
HOH
HOH
606
A
HOH
9
5
HOH
HOH
607
A
HOH
10
5
HOH
HOH
608
A
HOH
11
5
HOH
HOH
609
A
HOH
12
5
HOH
HOH
610
A
HOH
13
5
HOH
HOH
611
A
HOH
14
5
HOH
HOH
612
A
HOH
15
5
HOH
HOH
613
A
HOH
16
5
HOH
HOH
614
A
HOH
17
5
HOH
HOH
615
A
HOH
18
5
HOH
HOH
616
A
HOH
19
5
HOH
HOH
617
A
HOH
20
5
HOH
HOH
618
A
HOH
21
5
HOH
HOH
619
A
HOH
22
5
HOH
HOH
620
A
HOH
23
5
HOH
HOH
621
A
HOH
24
5
HOH
HOH
622
A
HOH
25
5
HOH
HOH
623
A
HOH
26
5
HOH
HOH
624
A
HOH
27
5
HOH
HOH
625
A
HOH
28
5
HOH
HOH
626
A
HOH
29
5
HOH
HOH
627
A
HOH
30
5
HOH
HOH
628
A
HOH
31
5
HOH
HOH
629
A
HOH
32
5
HOH
HOH
630
A
HOH
33
5
HOH
HOH
631
A
HOH
34
5
HOH
HOH
632
A
HOH
35
5
HOH
HOH
633
A
HOH
36
5
HOH
HOH
634
A
HOH
37
5
HOH
HOH
635
A
HOH
38
5
HOH
HOH
636
A
HOH
39
5
HOH
HOH
637
A
HOH
40
5
HOH
HOH
638
A
HOH
41
5
HOH
HOH
639
A
HOH
42
5
HOH
HOH
640
A
HOH
43
5
HOH
HOH
641
A
HOH
44
5
HOH
HOH
642
A
HOH
45
5
HOH
HOH
643
A
HOH
46
5
HOH
HOH
644
A
HOH
47
5
HOH
HOH
645
A
HOH
48
5
HOH
HOH
646
A
HOH
49
5
HOH
HOH
647
A
HOH
50
5
HOH
HOH
648
A
HOH
51
5
HOH
HOH
649
A
HOH
53
5
HOH
HOH
650
A
HOH
54
5
HOH
HOH
651
A
HOH
57
5
HOH
HOH
652
A
HOH
58
5
HOH
HOH
653
A
HOH
59
5
HOH
HOH
654
A
HOH
60
5
HOH
HOH
655
A
HOH
61
5
HOH
HOH
656
A
HOH
62
5
HOH
HOH
657
A
HOH
63
5
HOH
HOH
658
A
HOH
64
5
HOH
HOH
659
A
HOH
65
5
HOH
HOH
660
A
HOH
66
5
HOH
HOH
661
A
HOH
67
5
HOH
HOH
662
A
HOH
68
5
HOH
HOH
663
A
HOH
69
5
HOH
HOH
664
A
HOH
70
5
HOH
HOH
665
A
HOH
71
5
HOH
HOH
666
A
HOH
72
5
HOH
HOH
667
A
HOH
73
5
HOH
HOH
668
A
HOH
74
5
HOH
HOH
669
A
HOH
75
5
HOH
HOH
670
A
HOH
76
5
HOH
HOH
671
A
HOH
77
5
HOH
HOH
672
A
HOH
79
5
HOH
HOH
673
A
HOH
80
5
HOH
HOH
674
A
HOH
82
5
HOH
HOH
675
A
HOH
83
5
HOH
HOH
676
A
HOH
84
5
HOH
HOH
677
A
HOH
85
5
HOH
HOH
678
A
HOH
86
5
HOH
HOH
679
A
HOH
88
5
HOH
HOH
680
A
HOH
89
5
HOH
HOH
681
A
HOH
90
5
HOH
HOH
682
A
HOH
91
5
HOH
HOH
683
A
HOH
92
5
HOH
HOH
684
A
HOH
93
5
HOH
HOH
685
A
HOH
94
5
HOH
HOH
686
A
HOH
95
5
HOH
HOH
687
A
HOH
96
5
HOH
HOH
688
A
HOH
97
5
HOH
HOH
689
A
HOH
98
5
HOH
HOH
690
A
HOH
99
5
HOH
HOH
691
A
HOH
100
5
HOH
HOH
692
A
HOH
101
5
HOH
HOH
693
A
HOH
102
5
HOH
HOH
694
A
HOH
103
5
HOH
HOH
695
A
HOH
104
5
HOH
HOH
696
A
HOH
105
5
HOH
HOH
697
A
HOH
106
5
HOH
HOH
698
A
HOH
107
5
HOH
HOH
699
A
HOH
108
5
HOH
HOH
700
A
HOH
109
5
HOH
HOH
701
A
HOH
110
5
HOH
HOH
702
A
HOH
111
5
HOH
HOH
703
A
HOH
112
5
HOH
HOH
704
A
HOH
113
5
HOH
HOH
705
A
HOH
114
5
HOH
HOH
706
A
HOH
115
5
HOH
HOH
707
A
HOH
116
5
HOH
HOH
708
A
HOH
117
5
HOH
HOH
709
A
HOH
118
5
HOH
HOH
710
A
HOH
119
5
HOH
HOH
711
A
HOH
120
5
HOH
HOH
712
A
HOH
121
5
HOH
HOH
713
A
HOH
122
5
HOH
HOH
714
A
HOH
123
5
HOH
HOH
715
A
HOH
124
5
HOH
HOH
716
A
HOH
125
5
HOH
HOH
717
A
HOH
126
5
HOH
HOH
718
A
HOH
127
5
HOH
HOH
719
A
HOH
128
5
HOH
HOH
720
A
HOH
130
5
HOH
HOH
721
A
HOH
131
5
HOH
HOH
722
A
HOH
132
5
HOH
HOH
723
A
HOH
133
5
HOH
HOH
724
A
HOH
134
5
HOH
HOH
725
A
HOH
135
5
HOH
HOH
726
A
HOH
136
5
HOH
HOH
727
A
HOH
138
5
HOH
HOH
728
A
HOH
140
5
HOH
HOH
729
A
HOH
141
5
HOH
HOH
730
A
HOH
142
5
HOH
HOH
731
A
HOH
143
5
HOH
HOH
732
A
HOH
144
5
HOH
HOH
733
A
HOH
145
5
HOH
HOH
734
A
HOH
146
5
HOH
HOH
735
A
HOH
147
5
HOH
HOH
736
A
HOH
148
5
HOH
HOH
737
A
HOH
149
5
HOH
HOH
738
A
HOH
150
5
HOH
HOH
739
A
HOH
151
5
HOH
HOH
740
A
HOH
152
5
HOH
HOH
741
A
HOH
153
5
HOH
HOH
742
A
HOH
154
5
HOH
HOH
743
A
HOH
155
5
HOH
HOH
744
A
HOH
156
5
HOH
HOH
745
A
HOH
157
5
HOH
HOH
746
A
HOH
158
5
HOH
HOH
747
A
HOH
159
5
HOH
HOH
748
A
HOH
160
5
HOH
HOH
749
A
HOH
161
5
HOH
HOH
750
A
HOH
162
5
HOH
HOH
751
A
HOH
163
5
HOH
HOH
752
A
HOH
164
5
HOH
HOH
753
A
HOH
165
5
HOH
HOH
754
A
HOH
166
5
HOH
HOH
755
A
HOH
168
5
HOH
HOH
756
A
HOH
170
5
HOH
HOH
757
A
HOH
171
5
HOH
HOH
758
A
HOH
172
5
HOH
HOH
759
A
HOH
173
5
HOH
HOH
760
A
HOH
174
5
HOH
HOH
761
A
HOH
175
5
HOH
HOH
762
A
HOH
176
5
HOH
HOH
763
A
HOH
177
5
HOH
HOH
764
A
HOH
179
5
HOH
HOH
765
A
HOH
180
5
HOH
HOH
766
A
HOH
181
5
HOH
HOH
767
A
HOH
182
5
HOH
HOH
768
A
HOH
184
5
HOH
HOH
769
A
HOH
185
5
HOH
HOH
770
A
HOH
186
5
HOH
HOH
771
A
HOH
187
5
HOH
HOH
772
A
HOH
188
5
HOH
HOH
773
A
HOH
191
5
HOH
HOH
774
A
HOH
192
5
HOH
HOH
775
A
HOH
193
5
HOH
HOH
776
A
HOH
194
5
HOH
HOH
777
A
HOH
195
5
HOH
HOH
778
A
HOH
196
5
HOH
HOH
779
A
HOH
197
5
HOH
HOH
780
A
HOH
198
5
HOH
HOH
781
A
HOH
199
5
HOH
HOH
782
A
HOH
200
5
HOH
HOH
783
A
HOH
201
5
HOH
HOH
784
A
HOH
202
5
HOH
HOH
785
A
HOH
203
5
HOH
HOH
786
A
HOH
204
5
HOH
HOH
787
A
HOH
205
5
HOH
HOH
788
A
HOH
206
5
HOH
HOH
789
A
HOH
207
5
HOH
HOH
790
A
HOH
208
5
HOH
HOH
791
A
HOH
209
5
HOH
HOH
792
A
HOH
210
5
HOH
HOH
793
A
HOH
211
5
HOH
HOH
794
A
HOH
212
5
HOH
HOH
795
A
HOH
213
5
HOH
HOH
796
A
HOH
214
5
HOH
HOH
797
A
HOH
216
5
HOH
HOH
798
A
HOH
217
5
HOH
HOH
799
A
HOH
218
5
HOH
HOH
800
A
HOH
220
5
HOH
HOH
801
A
HOH
221
5
HOH
HOH
802
A
HOH
222
5
HOH
HOH
803
A
HOH
223
5
HOH
HOH
804
A
HOH
224
5
HOH
HOH
805
A
HOH
225
5
HOH
HOH
806
A
HOH
6
5
HOH
HOH
101
T
HOH
52
5
HOH
HOH
102
T
HOH
56
5
HOH
HOH
103
T
HOH
78
5
HOH
HOH
104
T
HOH
137
5
HOH
HOH
105
T
HOH
139
5
HOH
HOH
106
T
HOH
167
5
HOH
HOH
107
T
HOH
190
5
HOH
HOH
108
T
HOH
226
5
HOH
HOH
109
T
HOH
3
5
HOH
HOH
101
P
HOH
55
5
HOH
HOH
102
P
HOH
81
5
HOH
HOH
103
P
HOH
87
5
HOH
HOH
104
P
HOH
129
5
HOH
HOH
105
P
HOH
169
5
HOH
HOH
106
P
HOH
178
5
HOH
HOH
107
P
HOH
183
5
HOH
HOH
108
P
HOH
189
5
HOH
HOH
109
P
HOH
219
5
HOH
HOH
110
P
GLY
-2
n
1
GLY
-2
A
PRO
-1
n
2
PRO
-1
A
HIS
0
n
3
HIS
0
A
MET
1
n
4
MET
1
A
ALA
2
n
5
ALA
2
A
THR
3
n
6
THR
3
A
GLY
4
n
7
GLY
4
A
GLN
5
n
8
GLN
5
A
ASP
6
n
9
ASP
6
A
ARG
7
n
10
ARG
7
A
VAL
8
n
11
VAL
8
A
VAL
9
n
12
VAL
9
A
ALA
10
n
13
ALA
10
A
LEU
11
n
14
LEU
11
A
VAL
12
n
15
VAL
12
A
ASP
13
n
16
ASP
13
A
MET
14
n
17
MET
14
A
ASP
15
n
18
ASP
15
A
CYS
16
n
19
CYS
16
A
PHE
17
n
20
PHE
17
A
PHE
18
n
21
PHE
18
A
VAL
19
n
22
VAL
19
A
GLN
20
n
23
GLN
20
A
VAL
21
n
24
VAL
21
A
GLU
22
n
25
GLU
22
A
GLN
23
n
26
GLN
23
A
ARG
24
n
27
ARG
24
A
GLN
25
n
28
GLN
25
A
ASN
26
n
29
ASN
26
A
PRO
27
n
30
PRO
27
A
HIS
28
n
31
HIS
28
A
LEU
29
n
32
LEU
29
A
ARG
30
n
33
ARG
30
A
ASN
31
n
34
ASN
31
A
LYS
32
n
35
LYS
32
A
PRO
33
n
36
PRO
33
A
CYS
34
n
37
CYS
34
A
ALA
35
n
38
ALA
35
A
VAL
36
n
39
VAL
36
A
VAL
37
n
40
VAL
37
A
GLN
38
n
41
GLN
38
A
TYR
39
n
42
TYR
39
A
LYS
40
n
43
LYS
40
A
SER
41
n
44
SER
41
A
TRP
42
n
45
TRP
42
A
LYS
43
n
46
LYS
43
A
GLY
44
n
47
GLY
44
A
GLY
45
n
48
GLY
45
A
GLY
46
n
49
GLY
46
A
ILE
47
n
50
ILE
47
A
ILE
48
n
51
ILE
48
A
ALA
49
n
52
ALA
49
A
VAL
50
n
53
VAL
50
A
SER
51
n
54
SER
51
A
TYR
52
n
55
TYR
52
A
GLU
53
n
56
GLU
53
A
ALA
54
n
57
ALA
54
A
ARG
55
n
58
ARG
55
A
ALA
56
n
59
ALA
56
A
PHE
57
n
60
PHE
57
A
GLY
58
n
61
GLY
58
A
VAL
59
n
62
VAL
59
A
THR
60
n
63
THR
60
A
ARG
61
n
64
ARG
61
A
SER
62
n
65
SER
62
A
MET
63
n
66
MET
63
A
TRP
64
n
67
TRP
64
A
ALA
65
n
68
ALA
65
A
ASP
66
n
69
ASP
66
A
ASP
67
n
70
ASP
67
A
ALA
68
n
71
ALA
68
A
LYS
69
n
72
LYS
69
A
LYS
70
n
73
LYS
70
A
LEU
71
n
74
LEU
71
A
CYS
72
n
75
CYS
72
A
PRO
73
n
76
PRO
73
A
ASP
74
n
77
ASP
74
A
LEU
75
n
78
LEU
75
A
LEU
76
n
79
LEU
76
A
LEU
77
n
80
LEU
77
A
ALA
78
n
81
ALA
78
A
GLN
79
n
82
GLN
79
A
VAL
80
n
83
VAL
80
A
ARG
81
n
84
ARG
81
A
GLU
82
n
85
GLU
82
A
SER
83
n
86
SER
83
A
ARG
84
n
87
ARG
84
A
GLY
85
n
88
GLY
85
A
LYS
86
n
89
LYS
86
A
ALA
87
n
90
ALA
87
A
ASN
88
n
91
ASN
88
A
LEU
89
n
92
LEU
89
A
THR
90
n
93
THR
90
A
LYS
91
n
94
LYS
91
A
TYR
92
n
95
TYR
92
A
ARG
93
n
96
ARG
93
A
GLU
94
n
97
GLU
94
A
ALA
95
n
98
ALA
95
A
SER
96
n
99
SER
96
A
VAL
97
n
100
VAL
97
A
GLU
98
n
101
GLU
98
A
VAL
99
n
102
VAL
99
A
MET
100
n
103
MET
100
A
GLU
101
n
104
GLU
101
A
ILE
102
n
105
ILE
102
A
MET
103
n
106
MET
103
A
SER
104
n
107
SER
104
A
ARG
105
n
108
ARG
105
A
PHE
106
n
109
PHE
106
A
ALA
107
n
110
ALA
107
A
VAL
108
n
111
VAL
108
A
ILE
109
n
112
ILE
109
A
GLU
110
n
113
GLU
110
A
ARG
111
n
114
ARG
111
A
ALA
112
n
115
ALA
112
A
SER
113
n
116
SER
113
A
ILE
114
n
117
ILE
114
A
ASP
115
n
118
ASP
115
A
GLU
116
n
119
GLU
116
A
ALA
117
n
120
ALA
117
A
TYR
118
n
121
TYR
118
A
VAL
119
n
122
VAL
119
A
ASP
120
n
123
ASP
120
A
LEU
121
n
124
LEU
121
A
THR
122
n
125
THR
122
A
SER
123
n
126
SER
123
A
ALA
124
n
127
ALA
124
A
VAL
125
n
128
VAL
125
A
GLN
126
n
129
GLN
126
A
GLU
127
n
130
GLU
127
A
ARG
128
n
131
ARG
128
A
LEU
129
n
132
LEU
129
A
GLN
130
n
133
GLN
130
A
LYS
131
n
134
LYS
131
A
LEU
132
n
135
LEU
132
A
GLN
133
n
136
GLN
133
A
GLY
134
n
137
GLY
134
A
GLN
135
n
138
GLN
135
A
PRO
136
n
139
PRO
136
A
ILE
137
n
140
ILE
137
A
SER
138
n
141
SER
138
A
ALA
139
n
142
ALA
139
A
ASP
140
n
143
ASP
140
A
LEU
141
n
144
LEU
141
A
LEU
142
n
145
LEU
142
A
PRO
143
n
146
PRO
143
A
SER
144
n
147
SER
144
A
THR
145
n
148
THR
145
A
TYR
146
n
149
TYR
146
A
ILE
147
n
150
ILE
147
A
GLU
148
n
151
GLU
148
A
GLY
149
n
152
GLY
149
A
LEU
150
n
153
LEU
150
A
PRO
151
n
154
PRO
151
A
GLN
152
n
155
GLN
152
A
GLY
153
n
156
GLY
153
A
PRO
154
n
157
PRO
154
A
n
158
155
A
n
159
156
A
n
160
157
A
GLU
158
n
161
GLU
158
A
GLU
159
n
162
GLU
159
A
THR
160
n
163
THR
160
A
VAL
161
n
164
VAL
161
A
GLN
162
n
165
GLN
162
A
LYS
163
n
166
LYS
163
A
GLU
164
n
167
GLU
164
A
GLY
165
n
168
GLY
165
A
MET
166
n
169
MET
166
A
ARG
167
n
170
ARG
167
A
LYS
168
n
171
LYS
168
A
GLN
169
n
172
GLN
169
A
GLY
170
n
173
GLY
170
A
LEU
171
n
174
LEU
171
A
PHE
172
n
175
PHE
172
A
GLN
173
n
176
GLN
173
A
TRP
174
n
177
TRP
174
A
LEU
175
n
178
LEU
175
A
ASP
176
n
179
ASP
176
A
SER
177
n
180
SER
177
A
LEU
178
n
181
LEU
178
A
GLN
179
n
182
GLN
179
A
ILE
180
n
183
ILE
180
A
ASP
181
n
184
ASP
181
A
ASN
182
n
185
ASN
182
A
LEU
183
n
186
LEU
183
A
THR
184
n
187
THR
184
A
SER
185
n
188
SER
185
A
PRO
186
n
189
PRO
186
A
ASP
187
n
190
ASP
187
A
LEU
188
n
191
LEU
188
A
GLN
189
n
192
GLN
189
A
LEU
190
n
193
LEU
190
A
THR
191
n
194
THR
191
A
VAL
192
n
195
VAL
192
A
GLY
193
n
196
GLY
193
A
ALA
194
n
197
ALA
194
A
VAL
195
n
198
VAL
195
A
ILE
196
n
199
ILE
196
A
VAL
197
n
200
VAL
197
A
GLU
198
n
201
GLU
198
A
GLU
199
n
202
GLU
199
A
MET
200
n
203
MET
200
A
ARG
201
n
204
ARG
201
A
ALA
202
n
205
ALA
202
A
ALA
203
n
206
ALA
203
A
ILE
204
n
207
ILE
204
A
GLU
205
n
208
GLU
205
A
ARG
206
n
209
ARG
206
A
GLU
207
n
210
GLU
207
A
THR
208
n
211
THR
208
A
GLY
209
n
212
GLY
209
A
PHE
210
n
213
PHE
210
A
GLN
211
n
214
GLN
211
A
CYS
212
n
215
CYS
212
A
SER
213
n
216
SER
213
A
ALA
214
n
217
ALA
214
A
GLY
215
n
218
GLY
215
A
ILE
216
n
219
ILE
216
A
SER
217
n
220
SER
217
A
HIS
218
n
221
HIS
218
A
ASN
219
n
222
ASN
219
A
LYS
220
n
223
LYS
220
A
VAL
221
n
224
VAL
221
A
LEU
222
n
225
LEU
222
A
ALA
223
n
226
ALA
223
A
LYS
224
n
227
LYS
224
A
LEU
225
n
228
LEU
225
A
ALA
226
n
229
ALA
226
A
CYS
227
n
230
CYS
227
A
GLY
228
n
231
GLY
228
A
LEU
229
n
232
LEU
229
A
ASN
230
n
233
ASN
230
A
LYS
231
n
234
LYS
231
A
PRO
232
n
235
PRO
232
A
ASN
233
n
236
ASN
233
A
ARG
234
n
237
ARG
234
A
GLN
235
n
238
GLN
235
A
THR
236
n
239
THR
236
A
LEU
237
n
240
LEU
237
A
VAL
238
n
241
VAL
238
A
SER
239
n
242
SER
239
A
HIS
240
n
243
HIS
240
A
GLY
241
n
244
GLY
241
A
SER
242
n
245
SER
242
A
VAL
243
n
246
VAL
243
A
PRO
244
n
247
PRO
244
A
GLN
245
n
248
GLN
245
A
LEU
246
n
249
LEU
246
A
PHE
247
n
250
PHE
247
A
SER
248
n
251
SER
248
A
GLN
249
n
252
GLN
249
A
MET
250
n
253
MET
250
A
PRO
251
n
254
PRO
251
A
ILE
252
n
255
ILE
252
A
ARG
253
n
256
ARG
253
A
LYS
254
n
257
LYS
254
A
ILE
255
n
258
ILE
255
A
ARG
256
n
259
ARG
256
A
SER
257
n
260
SER
257
A
LEU
258
n
261
LEU
258
A
GLY
259
n
262
GLY
259
A
GLY
260
n
263
GLY
260
A
LYS
261
n
264
LYS
261
A
LEU
262
n
265
LEU
262
A
GLY
263
n
266
GLY
263
A
ALA
264
n
267
ALA
264
A
SER
265
n
268
SER
265
A
VAL
266
n
269
VAL
266
A
ILE
267
n
270
ILE
267
A
GLU
268
n
271
GLU
268
A
ILE
269
n
272
ILE
269
A
LEU
270
n
273
LEU
270
A
GLY
271
n
274
GLY
271
A
ILE
272
n
275
ILE
272
A
GLU
273
n
276
GLU
273
A
TYR
274
n
277
TYR
274
A
MET
275
n
278
MET
275
A
GLY
276
n
279
GLY
276
A
GLU
277
n
280
GLU
277
A
LEU
278
n
281
LEU
278
A
THR
279
n
282
THR
279
A
GLN
280
n
283
GLN
280
A
PHE
281
n
284
PHE
281
A
THR
282
n
285
THR
282
A
GLU
283
n
286
GLU
283
A
SER
284
n
287
SER
284
A
GLN
285
n
288
GLN
285
A
LEU
286
n
289
LEU
286
A
GLN
287
n
290
GLN
287
A
SER
288
n
291
SER
288
A
HIS
289
n
292
HIS
289
A
PHE
290
n
293
PHE
290
A
GLY
291
n
294
GLY
291
A
GLU
292
n
295
GLU
292
A
LYS
293
n
296
LYS
293
A
ASN
294
n
297
ASN
294
A
GLY
295
n
298
GLY
295
A
SER
296
n
299
SER
296
A
TRP
297
n
300
TRP
297
A
LEU
298
n
301
LEU
298
A
TYR
299
n
302
TYR
299
A
ALA
300
n
303
ALA
300
A
MET
301
n
304
MET
301
A
CYS
302
n
305
CYS
302
A
ARG
303
n
306
ARG
303
A
GLY
304
n
307
GLY
304
A
ILE
305
n
308
ILE
305
A
GLU
306
n
309
GLU
306
A
HIS
307
n
310
HIS
307
A
ASP
308
n
311
ASP
308
A
PRO
309
n
312
PRO
309
A
VAL
310
n
313
VAL
310
A
LYS
311
n
314
LYS
311
A
PRO
312
n
315
PRO
312
A
ARG
313
n
316
ARG
313
A
GLN
314
n
317
GLN
314
A
LEU
315
n
318
LEU
315
A
PRO
316
n
319
PRO
316
A
LYS
317
n
320
LYS
317
A
THR
318
n
321
THR
318
A
ILE
319
n
322
ILE
319
A
GLY
320
n
323
GLY
320
A
CYS
321
n
324
CYS
321
A
SER
322
n
325
SER
322
A
LYS
323
n
326
LYS
323
A
ASN
324
n
327
ASN
324
A
PHE
325
n
328
PHE
325
A
PRO
326
n
329
PRO
326
A
GLY
327
n
330
GLY
327
A
LYS
328
n
331
LYS
328
A
THR
329
n
332
THR
329
A
ALA
330
n
333
ALA
330
A
LEU
331
n
334
LEU
331
A
ALA
332
n
335
ALA
332
A
THR
333
n
336
THR
333
A
ARG
334
n
337
ARG
334
A
GLU
335
n
338
GLU
335
A
GLN
336
n
339
GLN
336
A
VAL
337
n
340
VAL
337
A
GLN
338
n
341
GLN
338
A
TRP
339
n
342
TRP
339
A
TRP
340
n
343
TRP
340
A
LEU
341
n
344
LEU
341
A
LEU
342
n
345
LEU
342
A
GLN
343
n
346
GLN
343
A
LEU
344
n
347
LEU
344
A
ALA
345
n
348
ALA
345
A
GLN
346
n
349
GLN
346
A
GLU
347
n
350
GLU
347
A
LEU
348
n
351
LEU
348
A
GLU
349
n
352
GLU
349
A
GLU
350
n
353
GLU
350
A
ARG
351
n
354
ARG
351
A
LEU
352
n
355
LEU
352
A
THR
353
n
356
THR
353
A
LYS
354
n
357
LYS
354
A
ASP
355
n
358
ASP
355
A
ARG
356
n
359
ARG
356
A
ASN
357
n
360
ASN
357
A
ASP
358
n
361
ASP
358
A
ASN
359
n
362
ASN
359
A
ASP
360
n
363
ASP
360
A
ARG
361
n
364
ARG
361
A
VAL
362
n
365
VAL
362
A
ALA
363
n
366
ALA
363
A
THR
364
n
367
THR
364
A
GLN
365
n
368
GLN
365
A
LEU
366
n
369
LEU
366
A
VAL
367
n
370
VAL
367
A
VAL
368
n
371
VAL
368
A
SER
369
n
372
SER
369
A
ILE
370
n
373
ILE
370
A
ARG
371
n
374
ARG
371
A
VAL
372
n
375
VAL
372
A
GLN
373
n
376
GLN
373
A
GLY
374
n
377
GLY
374
A
ASP
375
n
378
ASP
375
A
LYS
376
n
379
LYS
376
A
ARG
377
n
380
ARG
377
A
LEU
378
n
381
LEU
378
A
SER
379
n
382
SER
379
A
SER
380
n
383
SER
380
A
LEU
381
n
384
LEU
381
A
ARG
382
n
385
ARG
382
A
ARG
383
n
386
ARG
383
A
CYS
384
n
387
CYS
384
A
CYS
385
n
388
CYS
385
A
ALA
386
n
389
ALA
386
A
LEU
387
n
390
LEU
387
A
THR
388
n
391
THR
388
A
ARG
389
n
392
ARG
389
A
TYR
390
n
393
TYR
390
A
ASP
391
n
394
ASP
391
A
ALA
392
n
395
ALA
392
A
HIS
393
n
396
HIS
393
A
LYS
394
n
397
LYS
394
A
MET
395
n
398
MET
395
A
SER
396
n
399
SER
396
A
HIS
397
n
400
HIS
397
A
ASP
398
n
401
ASP
398
A
ALA
399
n
402
ALA
399
A
PHE
400
n
403
PHE
400
A
THR
401
n
404
THR
401
A
VAL
402
n
405
VAL
402
A
ILE
403
n
406
ILE
403
A
LYS
404
n
407
LYS
404
A
ASN
405
n
408
ASN
405
A
CYS
406
n
409
CYS
406
A
ASN
407
n
410
ASN
407
A
THR
408
n
411
THR
408
A
SER
409
n
412
SER
409
A
GLY
410
n
413
GLY
410
A
ILE
411
n
414
ILE
411
A
GLN
412
n
415
GLN
412
A
THR
413
n
416
THR
413
A
GLU
414
n
417
GLU
414
A
TRP
415
n
418
TRP
415
A
SER
416
n
419
SER
416
A
PRO
417
n
420
PRO
417
A
PRO
418
n
421
PRO
418
A
LEU
419
n
422
LEU
419
A
THR
420
n
423
THR
420
A
MET
421
n
424
MET
421
A
LEU
422
n
425
LEU
422
A
PHE
423
n
426
PHE
423
A
LEU
424
n
427
LEU
424
A
CYS
425
n
428
CYS
425
A
ALA
426
n
429
ALA
426
A
THR
427
n
430
THR
427
A
LYS
428
n
431
LYS
428
A
PHE
429
n
432
PHE
429
A
SER
430
n
433
SER
430
A
ALA
431
n
434
ALA
431
A
SER
432
n
435
SER
432
A
DC
1
n
1
DC
1
T
DA
2
n
2
DA
2
T
DT
3
n
3
DT
3
T
DT
4
n
4
DT
4
T
DA
5
n
5
DA
5
T
DT
6
n
6
DT
6
T
DG
7
n
7
DG
7
T
DA
8
n
8
DA
8
T
DC
9
n
9
DC
9
T
DG
10
n
10
DG
10
T
DC
11
n
11
DC
11
T
DT
12
n
12
DT
12
T
DA
1
n
1
DA
1
P
DG
2
n
2
DG
2
P
DC
3
n
3
DC
3
P
DG
4
n
4
DG
4
P
DT
5
n
5
DT
5
P
DC
6
n
6
DC
6
P
DA
7
n
7
DA
7
P
DT
8
n
8
DT
8
P
DA
9
n
9
DA
9
P
author_and_software_defined_assembly
PISA
3
trimeric
5150
-26
22290
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
110
A
N
GLU
113
A
O
TYR
118
A
O
TYR
121
A
O
VAL
119
A
O
VAL
122
A
N
ALA
10
A
N
ALA
13
A
N
VAL
9
A
N
VAL
12
A
O
SER
217
A
O
SER
220
A
N
ILE
216
A
N
ILE
219
A
O
THR
236
A
O
THR
239
A
O
LEU
237
A
O
LEU
240
A
N
TYR
146
A
N
TYR
149
A
O
GLY
46
A
O
GLY
49
A
N
GLN
38
A
N
GLN
41
A
N
VAL
37
A
N
VAL
40
A
O
ALA
78
A
O
ALA
81
A
N
SER
83
A
N
SER
86
A
O
LYS
86
A
O
LYS
89
A
N
ILE
319
A
N
ILE
322
A
O
ALA
426
A
O
ALA
429
A
O
TRP
415
A
O
TRP
418
A
N
ALA
332
A
N
ALA
335
A
N
ILE
319
A
N
ILE
322
A
O
ALA
426
A
O
ALA
429
A
O
CYS
425
A
O
CYS
428
A
N
VAL
367
A
N
VAL
370
A
N
VAL
368
A
N
VAL
371
A
O
ARG
383
A
O
ARG
386
A
N
VAL
362
A
N
VAL
365
A
O
SER
430
A
O
SER
433
1
A
CG
GLU
158
A
CG
GLU
161
1
Y
1
A
CD
GLU
158
A
CD
GLU
161
1
Y
1
A
OE1
GLU
158
A
OE1
GLU
161
1
Y
1
A
OE2
GLU
158
A
OE2
GLU
161
1
Y
1
A
CG
GLU
159
A
CG
GLU
162
1
Y
1
A
CD
GLU
159
A
CD
GLU
162
1
Y
1
A
OE1
GLU
159
A
OE1
GLU
162
1
Y
1
A
OE2
GLU
159
A
OE2
GLU
162
1
Y
1
T
O5'
DC
1
B
O5'
DC
1
1
Y
1
T
C5'
DC
1
B
C5'
DC
1
1
Y
1
T
C4'
DC
1
B
C4'
DC
1
1
Y
1
T
O4'
DC
1
B
O4'
DC
1
1
Y
1
T
C3'
DC
1
B
C3'
DC
1
1
Y
1
T
C2'
DC
1
B
C2'
DC
1
1
Y
1
T
C1'
DC
1
B
C1'
DC
1
1
Y
1
T
N1
DC
1
B
N1
DC
1
1
Y
1
T
C2
DC
1
B
C2
DC
1
1
Y
1
T
O2
DC
1
B
O2
DC
1
1
Y
1
T
N3
DC
1
B
N3
DC
1
1
Y
1
T
C4
DC
1
B
C4
DC
1
1
Y
1
T
N4
DC
1
B
N4
DC
1
1
Y
1
T
C5
DC
1
B
C5
DC
1
1
Y
1
T
C6
DC
1
B
C6
DC
1
1
Y
1
A
THR
155
A
THR
158
1
Y
1
A
THR
156
A
THR
159
1
Y
1
A
ALA
157
A
ALA
160
1
Y
1
-5.36
0.80
102.40
97.04
T
T
T
C3'
C2'
C1'
DT
DT
DT
3
3
3
N
1
1.98
0.30
108.30
110.28
T
T
T
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
2.87
0.30
108.30
111.17
T
T
T
O4'
C1'
N9
DA
DA
DA
8
8
8
N
1
2.18
0.30
108.30
110.48
P
P
P
O4'
C1'
N1
DT
DT
DT
8
8
8
N
1
A
CYS
16
25.43
60.99
1
A
TYR
39
68.33
173.28
1
A
LYS
40
-147.67
-26.53
1
A
THR
160
-68.87
17.65
1
A
SER
217
-160.32
-162.18
1
A
SER
257
92.44
-4.02
1
A
MET
421
-172.48
126.95
72.860
20.5522
7.150
0.5028
0.0000
-0.0000
0.5028
-0.0000
-1.0055
0.2568
0.1978
0.2009
2.211
24.012
964
18862
5.11
82.26
1.000
0.210
0.8262
0.33
1
0.01
FOURIER SYNTHESIS
24.9500
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
40.288
0.400
2.211
24.012
225
4021
12
408
3376
0.004
3922
0.818
5381
0.051
603
0.003
626
16.673
1516
0.3143
0.2545
2.3278
114
2092
2206
7
68.0000
0.2830
0.2345
2.4735
127
2356
2483
7
76.0000
0.3218
0.2297
2.6642
131
2442
2573
7
79.0000
0.2853
0.2267
2.9319
132
2610
2742
7
84.0000
0.2770
0.1970
3.3552
145
2736
2881
7
88.0000
0.2113
0.1518
4.2235
155
2855
3010
7
92.0000
0.2053
0.1629
24.0131
160
2807
2967
7
89.0000
16.150
2.2
50
4ED6
20425
0.11
1
8.4
2.2
89.2
2.20
2.26
2.1
0.445
1
2.1
78.1
data collection
StructureStudio
refinement
PHENIX
(phenix.refine: 1.6.1_357)
data reduction
XDS
data scaling
XDS
Human DNA polymerase eta - DNA ternary complex: Reaction in the AT crystal at pH 6.7 for 15 hr, Sideway translocation
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
A
CYS
16
A
CYS
19
HELX_P
A
ASN
26
A
ASN
29
1
1
11
A
PRO
27
A
PRO
30
HELX_P
A
ARG
30
A
ARG
33
5
2
4
A
SER
51
A
SER
54
HELX_P
A
ALA
56
A
ALA
59
1
3
6
A
TRP
64
A
TRP
67
HELX_P
A
CYS
72
A
CYS
75
1
4
9
A
LEU
89
A
LEU
92
HELX_P
A
ALA
107
A
ALA
110
1
5
19
A
LEU
121
A
LEU
124
HELX_P
A
LEU
132
A
LEU
135
1
6
12
A
SER
138
A
SER
141
HELX_P
A
LEU
142
A
LEU
145
5
7
5
A
GLN
162
A
GLN
165
HELX_P
A
LEU
178
A
LEU
181
1
8
17
A
SER
185
A
SER
188
HELX_P
A
GLY
209
A
GLY
212
1
9
25
A
ASN
219
A
ASN
222
HELX_P
A
GLY
228
A
GLY
231
1
10
10
A
SER
239
A
SER
242
HELX_P
A
GLY
241
A
GLY
244
5
11
3
A
SER
242
A
SER
245
HELX_P
A
GLN
249
A
GLN
252
1
12
8
A
MET
250
A
MET
253
HELX_P
A
ILE
255
A
ILE
258
5
13
6
A
GLY
260
A
GLY
263
HELX_P
A
GLY
271
A
GLY
274
1
14
12
A
TYR
274
A
TYR
277
HELX_P
A
PHE
281
A
PHE
284
5
15
8
A
THR
282
A
THR
285
HELX_P
A
GLY
291
A
GLY
294
1
16
10
A
GLY
291
A
GLY
294
HELX_P
A
CYS
302
A
CYS
305
1
17
12
A
PRO
326
A
PRO
329
HELX_P
A
ALA
330
A
ALA
333
5
18
5
A
ARG
334
A
ARG
337
HELX_P
A
ASP
360
A
ASP
363
1
19
27
A
ASP
391
A
ASP
394
HELX_P
A
LYS
404
A
LYS
407
1
20
14
A
ASN
405
A
ASN
408
HELX_P
A
ASN
407
A
ASN
410
5
21
3
hydrog
REVERSED HOOGSTEEN
T
DT
4
B
N3
DT
4
1_555
P
DA
9
C
N7
DA
9
1_555
hydrog
REVERSED HOOGSTEEN
T
DT
4
B
O2
DT
4
1_555
P
DA
9
C
N6
DA
9
1_555
hydrog
WATSON-CRICK
T
DA
5
B
N1
DA
5
1_555
P
DT
8
C
N3
DT
8
1_555
hydrog
WATSON-CRICK
T
DA
5
B
N6
DA
5
1_555
P
DT
8
C
O4
DT
8
1_555
hydrog
WATSON-CRICK
T
DT
6
B
N3
DT
6
1_555
P
DA
7
C
N1
DA
7
1_555
hydrog
WATSON-CRICK
T
DT
6
B
O4
DT
6
1_555
P
DA
7
C
N6
DA
7
1_555
hydrog
WATSON-CRICK
T
DG
7
B
N1
DG
7
1_555
P
DC
6
C
N3
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
7
B
N2
DG
7
1_555
P
DC
6
C
O2
DC
6
1_555
hydrog
WATSON-CRICK
T
DG
7
B
O6
DG
7
1_555
P
DC
6
C
N4
DC
6
1_555
hydrog
WATSON-CRICK
T
DA
8
B
N1
DA
8
1_555
P
DT
5
C
N3
DT
5
1_555
hydrog
WATSON-CRICK
T
DA
8
B
N6
DA
8
1_555
P
DT
5
C
O4
DT
5
1_555
hydrog
WATSON-CRICK
T
DC
9
B
N3
DC
9
1_555
P
DG
4
C
N1
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
9
B
N4
DC
9
1_555
P
DG
4
C
O6
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
9
B
O2
DC
9
1_555
P
DG
4
C
N2
DG
4
1_555
hydrog
WATSON-CRICK
T
DG
10
B
N1
DG
10
1_555
P
DC
3
C
N3
DC
3
1_555
hydrog
WATSON-CRICK
T
DG
10
B
N2
DG
10
1_555
P
DC
3
C
O2
DC
3
1_555
hydrog
WATSON-CRICK
T
DG
10
B
O6
DG
10
1_555
P
DC
3
C
N4
DC
3
1_555
hydrog
WATSON-CRICK
T
DC
11
B
N3
DC
11
1_555
P
DG
2
C
N1
DG
2
1_555
hydrog
WATSON-CRICK
T
DC
11
B
N4
DC
11
1_555
P
DG
2
C
O6
DG
2
1_555
hydrog
WATSON-CRICK
T
DC
11
B
O2
DC
11
1_555
P
DG
2
C
N2
DG
2
1_555
hydrog
WATSON-CRICK
T
DT
12
B
N3
DT
12
1_555
P
DA
1
C
N1
DA
1
1_555
hydrog
WATSON-CRICK
T
DT
12
B
O4
DT
12
1_555
P
DA
1
C
N6
DA
1
1_555
TRANSFERASE/DNA
TRANSFERASE-DNA COMPLEX
A
LEU
150
A
LEU
153
1
A
PRO
151
A
PRO
154
2.60
A
LYS
231
A
LYS
234
1
A
PRO
232
A
PRO
235
1.51
A
SER
416
A
SER
419
1
A
PRO
417
A
PRO
420
-8.98
POLH_HUMAN
UNP
1
1
Q9Y253
MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQV
RESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTTAEET
VQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSH
GSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIG
CSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAF
TVIKNCNTSGIQTEWSPPLTMLFLCATKFSAS
4ED6
PDB
2
4ED6
4ED6
PDB
3
4ED6
1
432
4ED6
1
432
Q9Y253
A
1
4
435
1
12
4ED6
1
12
4ED6
T
2
1
12
1
9
4ED6
1
9
4ED6
P
3
1
9
1
expression tag
GLY
-2
4ED6
A
Q9Y253
UNP
1
1
expression tag
PRO
-1
4ED6
A
Q9Y253
UNP
2
1
expression tag
HIS
0
4ED6
A
Q9Y253
UNP
3
6
3
2
3
4
2
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
108
A
VAL
111
A
ARG
111
A
ARG
114
A
GLU
116
A
GLU
119
A
ASP
120
A
ASP
123
A
VAL
9
A
VAL
12
A
MET
14
A
MET
17
A
CYS
212
A
CYS
215
A
SER
217
A
SER
220
A
GLN
235
A
GLN
238
A
LEU
237
A
LEU
240
A
THR
145
A
THR
148
A
ILE
147
A
ILE
150
A
GLY
46
A
GLY
49
A
VAL
50
A
VAL
53
A
CYS
34
A
CYS
37
A
GLN
38
A
GLN
41
A
LEU
76
A
LEU
79
A
GLN
79
A
GLN
82
A
GLU
82
A
GLU
85
A
SER
83
A
SER
86
A
LYS
86
A
LYS
89
A
ALA
87
A
ALA
90
A
ILE
319
A
ILE
322
A
ASN
324
A
ASN
327
A
GLU
414
A
GLU
417
A
THR
427
A
THR
430
A
LEU
331
A
LEU
334
A
THR
333
A
THR
336
A
ILE
319
A
ILE
322
A
ASN
324
A
ASN
327
A
GLU
414
A
GLU
417
A
THR
427
A
THR
430
A
GLN
365
A
GLN
368
A
VAL
372
A
VAL
375
A
LEU
381
A
LEU
384
A
ALA
386
A
ALA
389
A
ARG
361
A
ARG
364
A
VAL
362
A
VAL
365
A
SER
430
A
SER
433
A
ALA
431
A
ALA
434
BINDING SITE FOR RESIDUE GOL A 501
A
GOL
501
Software
9
BINDING SITE FOR RESIDUE GOL A 502
A
GOL
502
Software
9
A
ARG
24
A
ARG
27
9
6_545
A
GLN
25
A
GLN
28
9
6_545
A
PRO
244
A
PRO
247
9
1_555
A
SER
248
A
SER
251
9
1_555
A
GLY
276
A
GLY
279
9
1_555
A
GLU
277
A
GLU
280
9
1_555
A
HOH
607
F
HOH
9
1_555
A
HOH
621
F
HOH
9
1_555
A
HOH
631
F
HOH
9
1_555
A
ASN
26
A
ASN
29
9
1_555
A
PRO
27
A
PRO
30
9
1_555
A
HIS
28
A
HIS
31
9
1_555
A
GLY
271
A
GLY
274
9
5_664
A
ILE
272
A
ILE
275
9
5_664
A
GLU
273
A
GLU
276
9
5_664
A
TYR
274
A
TYR
277
9
5_664
A
GLU
277
A
GLU
280
9
5_664
A
HOH
669
F
HOH
9
5_664
169
P 61