0.009156
0.005286
0.000000
0.000000
0.010573
0.000000
0.000000
0.000000
0.010983
0.00000
0.00000
0.00000
Marx, A.
Diederichs, K.
Obeid, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
109.213
109.213
91.047
C19 H20 N3 O12 P3
575.296
[[(2S,5R)-5-[4-azanyl-5-[2-(4-ethynylphenyl)ethynyl]-2-oxidanylidene-pyrimidin-1-yl]oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
non-polymer
C19 H18 N3 O6 P
415.336
n
[(2S,5R)-5-{4-amino-5-[(4-ethynylphenyl)ethynyl]-2-oxopyrimidin-1(2H)-yl}tetrahydrofuran-2-yl]methyl dihydrogen phosphate
DNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C6 H14 O4
150.173
TRIETHYLENE GLYCOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
P
N
5
N
O
N
6
N
P
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
O
N
11
N
O
N
12
N
O
N
13
N
O
N
14
R
C
N
15
N
N
N
16
N
C
N
17
N
C
N
18
N
C
N
19
N
C
N
20
N
N
N
21
N
C
N
22
N
C
N
23
N
O
N
24
N
N
N
25
N
O
N
26
S
C
N
27
N
C
N
28
N
C
N
29
N
C
Y
30
N
C
Y
31
N
C
Y
32
N
C
Y
33
N
C
Y
34
N
C
Y
35
N
C
N
36
N
C
N
37
N
C
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
O
N
59
N
P
N
60
N
O
N
61
N
O
N
62
R
C
N
63
N
N
N
64
N
C
N
65
N
C
N
66
N
C
N
67
N
C
N
68
N
N
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
N
N
73
N
O
N
74
S
C
N
75
N
C
N
76
N
C
N
77
N
C
Y
78
N
C
Y
79
N
C
Y
80
N
C
Y
81
N
C
Y
82
N
C
Y
83
N
C
N
84
N
C
N
85
N
C
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
O
N
104
N
H
N
105
N
N
N
106
S
C
N
107
N
C
N
108
N
O
N
109
N
C
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
N
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
N
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
O
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
CA
N
179
N
O
N
180
N
P
N
181
N
O
N
182
N
O
N
183
N
O
N
184
N
C
N
185
R
C
N
186
N
O
N
187
S
C
N
188
N
O
N
189
N
C
N
190
R
C
Y
191
N
N
Y
192
N
C
Y
193
N
N
Y
194
N
C
Y
195
N
C
N
196
N
N
Y
197
N
N
Y
198
N
C
Y
199
N
N
Y
200
N
C
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
O
N
216
N
P
N
217
N
O
N
218
N
O
N
219
N
O
N
220
N
C
N
221
R
C
N
222
N
O
N
223
S
C
N
224
N
O
N
225
N
C
N
226
R
C
N
227
N
N
N
228
N
C
N
229
N
O
N
230
N
N
N
231
N
C
N
232
N
N
N
233
N
C
N
234
N
C
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
O
N
250
N
P
N
251
N
O
N
252
N
O
N
253
N
O
N
254
N
C
N
255
R
C
N
256
N
O
N
257
S
C
N
258
N
O
N
259
N
C
N
260
R
C
Y
261
N
N
Y
262
N
C
Y
263
N
N
Y
264
N
C
N
265
N
C
N
266
N
O
N
267
N
N
N
268
N
C
N
269
N
N
N
270
N
N
Y
271
N
C
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
O
N
287
N
P
N
288
N
O
N
289
N
O
N
290
N
O
N
291
N
C
N
292
R
C
N
293
N
O
N
294
S
C
N
295
N
O
N
296
N
C
N
297
R
C
N
298
N
N
N
299
N
C
N
300
N
O
N
301
N
N
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
C
N
338
N
C
N
339
N
O
N
340
N
N
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
C
N
358
N
C
N
359
N
O
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
N
C
N
373
N
C
N
374
N
O
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
C
N
382
N
O
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
Y
400
N
C
Y
401
N
N
Y
402
N
C
Y
403
N
C
Y
404
N
N
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
O
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
S
C
N
424
N
C
N
425
N
C
N
426
N
C
N
427
N
O
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
N
N
442
S
C
N
443
N
C
N
444
N
O
N
445
N
C
N
446
N
C
N
447
N
C
N
448
N
C
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
C
N
471
N
N
N
472
N
O
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
N
N
489
S
C
N
490
N
C
N
491
N
O
N
492
N
C
N
493
N
C
N
494
N
S
N
495
N
C
N
496
N
O
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
MG
N
509
N
C
N
510
N
O
N
511
N
C
N
512
N
O
N
513
N
C
N
514
N
C
N
515
N
O
N
516
N
C
N
517
N
C
N
518
N
O
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
N
N
534
S
C
N
535
N
C
N
536
N
O
N
537
N
C
Y
538
N
C
Y
539
N
C
Y
540
N
C
Y
541
N
C
Y
542
N
C
Y
543
N
C
N
544
N
O
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
N
N
557
S
C
N
558
N
C
N
559
N
O
N
560
N
C
N
561
N
C
N
562
N
C
N
563
N
O
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
N
N
574
S
C
N
575
N
C
N
576
N
O
N
577
N
C
N
578
N
O
N
579
N
O
N
580
N
H
N
581
N
H
N
582
N
H
N
583
N
H
N
584
N
H
N
585
N
H
N
586
N
H
N
587
N
N
N
588
S
C
N
589
N
C
N
590
N
O
N
591
R
C
N
592
N
O
N
593
N
C
N
594
N
O
N
595
N
H
N
596
N
H
N
597
N
H
N
598
N
H
N
599
N
H
N
600
N
H
N
601
N
H
N
602
N
H
N
603
N
H
N
604
N
N
N
605
S
C
N
606
N
C
N
607
N
O
N
608
N
C
Y
609
N
C
Y
610
N
C
Y
611
N
C
Y
612
N
N
Y
613
N
C
Y
614
N
C
Y
615
N
C
Y
616
N
C
Y
617
N
C
N
618
N
O
N
619
N
H
N
620
N
H
N
621
N
H
N
622
N
H
N
623
N
H
N
624
N
H
N
625
N
H
N
626
N
H
N
627
N
H
N
628
N
H
N
629
N
H
N
630
N
H
N
631
N
N
N
632
S
C
N
633
N
C
N
634
N
O
N
635
N
C
Y
636
N
C
Y
637
N
C
Y
638
N
C
Y
639
N
C
Y
640
N
C
Y
641
N
C
N
642
N
O
N
643
N
O
N
644
N
H
N
645
N
H
N
646
N
H
N
647
N
H
N
648
N
H
N
649
N
H
N
650
N
H
N
651
N
H
N
652
N
H
N
653
N
H
N
654
N
H
N
655
N
N
N
656
S
C
N
657
N
C
N
658
N
O
N
659
N
C
N
660
N
C
N
661
N
C
N
662
N
O
N
663
N
H
N
664
N
H
N
665
N
H
N
666
N
H
N
667
N
H
N
668
N
H
N
669
N
H
N
670
N
H
N
671
N
H
N
672
N
H
N
673
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
doub
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
doub
N
23
N
sing
Y
24
N
doub
Y
25
N
sing
Y
26
N
sing
N
27
N
trip
N
28
N
sing
N
29
N
sing
N
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
doub
N
35
N
sing
N
36
N
trip
Y
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
trip
N
80
N
sing
N
81
N
sing
Y
82
N
doub
Y
83
N
sing
Y
84
N
sing
Y
85
N
doub
Y
86
N
doub
Y
87
N
sing
N
88
N
sing
N
89
N
trip
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
Y
201
N
sing
Y
202
N
sing
Y
203
N
doub
N
204
N
sing
Y
205
N
sing
Y
206
N
sing
Y
207
N
doub
N
208
N
sing
Y
209
N
doub
N
210
N
sing
N
211
N
sing
Y
212
N
sing
Y
213
N
doub
N
214
N
sing
Y
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
Y
274
N
sing
Y
275
N
sing
Y
276
N
doub
N
277
N
sing
Y
278
N
sing
N
279
N
sing
Y
280
N
doub
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
Y
406
N
sing
Y
407
N
doub
Y
408
N
doub
N
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
doub
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
doub
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
Y
537
N
doub
Y
538
N
sing
Y
539
N
sing
N
540
N
sing
Y
541
N
doub
N
542
N
sing
Y
543
N
doub
N
544
N
sing
Y
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
doub
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
doub
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
sing
N
577
N
sing
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
N
582
N
sing
N
583
N
sing
N
584
N
sing
N
585
N
doub
N
586
N
sing
N
587
N
sing
N
588
N
sing
N
589
N
sing
N
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
N
594
N
sing
N
595
N
sing
N
596
N
sing
N
597
N
sing
N
598
N
sing
N
599
N
sing
N
600
N
sing
N
601
N
doub
N
602
N
sing
N
603
N
sing
N
604
N
sing
N
605
N
sing
Y
606
N
doub
Y
607
N
sing
Y
608
N
sing
N
609
N
sing
Y
610
N
doub
Y
611
N
sing
Y
612
N
sing
N
613
N
sing
Y
614
N
sing
Y
615
N
doub
N
616
N
sing
Y
617
N
doub
N
618
N
sing
Y
619
N
sing
N
620
N
sing
N
621
N
sing
N
622
N
sing
N
623
N
sing
N
624
N
sing
N
625
N
sing
N
626
N
sing
N
627
N
sing
N
628
N
sing
N
629
N
doub
N
630
N
sing
N
631
N
sing
N
632
N
sing
N
633
N
sing
Y
634
N
doub
Y
635
N
sing
Y
636
N
sing
N
637
N
sing
Y
638
N
doub
N
639
N
sing
Y
640
N
doub
N
641
N
sing
Y
642
N
sing
N
643
N
sing
N
644
N
sing
N
645
N
sing
N
646
N
sing
N
647
N
sing
N
648
N
sing
N
649
N
sing
N
650
N
sing
N
651
N
sing
N
652
N
sing
N
653
N
doub
N
654
N
sing
N
655
N
sing
N
656
N
sing
N
657
N
sing
N
658
N
sing
N
659
N
sing
N
660
N
sing
N
661
N
sing
N
662
N
sing
N
663
N
sing
N
664
N
sing
To be Published
0353
Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing modified pyrimidines
10.2210/pdb4elv/pdb
pdb_00004elv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Dynamically bendable mirror, LN2 cooled fixed-exit, Si(111) monochromator
PIXEL
2010-08-13
PSI PILATUS 6M
LN2 cooled fixed-exit, Si(111) monochromator
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
X06SA
SLS
1.00
SYNCHROTRON
SLS BEAMLINE X06SA
60936.965
DNA polymerase I, thermostable
2.7.7.7
UNP RESIDUES 293-832
1
man
polymer
DNA primer
3741.509
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(0R8))-3')
1
syn
polymer
DNA template
4964.216
DNA (5'-D(*AP*AP*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3')
1
syn
polymer
24.305
MAGNESIUM ION
3
syn
non-polymer
575.296
[[(2S,5R)-5-[4-azanyl-5-[2-(4-ethynylphenyl)ethynyl]-2-oxidanylidene-pyrimidin-1-yl]oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
1
syn
non-polymer
92.094
GLYCEROL
4
syn
non-polymer
150.173
TRIETHYLENE GLYCOL
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
2
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
323
nat
water
Taq polymerase 1
no
no
ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDD
PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD
VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI
LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS
QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF
IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL
EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE
ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDD
PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD
VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI
LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS
QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF
IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL
EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE
A
polypeptide(L)
no
yes
(DG)(DA)(DC)(DC)(DA)(DC)(DG)(DG)(DC)(DG)(DC)(0R8)
GACCACGGCGCX
B
polydeoxyribonucleotide
no
no
(DA)(DA)(DA)(DG)(DG)(DG)(DC)(DG)(DC)(DC)(DG)(DT)(DG)(DG)(DT)(DC)
AAAGGGCGCCGTGGTC
C
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
polA, pol1
271
Thermus aquaticus
562
Escherichia coli
1
2.25
45.35
VAPOR DIFFUSION, HANGING DROP
8.4
50 mM Tris HCl pH=8.4, 0.2 M NH4Cl, 10 mM CaCl2, 34% PEG 4000, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
-6.044
1
19
B
101
C
216
-1.373
B_DG101:DC216_C
1
-5.570
-0.244
0.094
-0.125
2.534
1
20
B
102
C
215
5.603
B_DA102:DT215_C
2
-7.498
-0.148
0.095
-0.018
6.290
1
19
B
103
C
214
4.210
B_DC103:DG214_C
3
-14.181
0.131
-0.111
-0.204
-5.374
1
19
B
104
C
213
1.272
B_DC104:DG213_C
4
-10.338
0.243
0.232
-0.267
0.341
1
20
B
105
C
212
-1.623
B_DA105:DT212_C
5
-10.871
0.114
-0.002
-0.144
0.369
1
19
B
106
C
211
-1.123
B_DC106:DG211_C
6
-9.114
0.209
0.066
-0.187
6.531
1
19
B
107
C
210
2.044
B_DG107:DC210_C
7
-17.950
-0.232
0.358
-0.217
-4.728
1
19
B
108
C
209
-1.864
B_DG108:DC209_C
8
-9.157
-0.036
0.145
-0.137
5.856
1
19
B
109
C
208
-0.331
B_DC109:DG208_C
9
2.001
0.161
-0.431
-0.133
7.032
1
19
B
110
C
207
1.764
B_DG110:DC207_C
10
-11.338
-0.247
0.086
-0.176
8.438
1
19
B
111
C
206
-0.088
B_DC111:DG206_C
11
-4.135
0.305
0.069
-0.121
2.917
32.633
B
B
101
102
9.686
C
C
216
215
3.081
5.419
0.162
-0.775
BB_DG101DA102:DT215DC216_CC
1
0.541
-0.967
32.188
-2.248
-0.201
3.021
33.989
B
B
102
103
7.297
C
C
215
214
3.151
4.254
-0.165
-0.814
BB_DA102DC103:DG214DT215_CC
2
1.169
-2.005
33.710
-2.037
0.460
3.154
30.946
B
B
103
104
15.064
C
C
214
213
3.511
7.943
-0.483
-1.082
BB_DC103DC104:DG213DG214_CC
3
-2.507
4.754
29.830
-3.623
0.402
3.027
34.709
B
B
104
105
15.447
C
C
213
212
3.133
9.106
-0.652
0.206
BB_DC104DA105:DT212DG213_CC
4
2.577
-4.371
33.432
-0.995
1.472
3.249
32.103
B
B
105
106
2.532
C
C
212
211
3.278
1.400
0.390
-0.490
BB_DA105DC106:DG211DT212_CC
5
-0.405
0.733
32.071
-1.137
-0.778
3.121
33.639
B
B
106
107
21.091
C
C
211
210
3.188
11.952
0.242
0.396
BB_DC106DG107:DC210DG211_CC
6
-0.805
1.420
31.491
-1.264
-0.549
3.598
33.165
B
B
107
108
-1.136
C
C
210
209
3.522
-0.647
0.829
-0.424
BB_DG107DG108:DC209DC210_CC
7
3.677
-6.455
32.960
-0.625
-0.777
3.115
31.456
B
B
108
109
10.357
C
C
209
208
3.147
5.544
0.869
-0.559
BB_DG108DC109:DG208DC209_CC
8
6.769
-12.645
30.244
-2.044
-0.366
3.308
41.316
B
B
109
110
12.409
C
C
208
207
3.377
8.627
-0.345
0.029
BB_DC109DG110:DC207DG208_CC
9
-9.264
13.327
39.409
-0.930
-0.554
2.464
29.421
B
B
110
111
29.248
C
C
207
206
3.584
14.250
-0.575
-1.486
BB_DG110DC111:DG206DC207_CC
10
-1.198
2.460
25.779
-5.944
0.878
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-04-24
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-04-11
REL
REL
MG
MAGNESIUM ION
0R7
[[(2S,5R)-5-[4-azanyl-5-[2-(4-ethynylphenyl)ethynyl]-2-oxidanylidene-pyrimidin-1-yl]oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
GOL
GLYCEROL
PGE
TRIETHYLENE GLYCOL
EDO
1,2-ETHANEDIOL
CA
CALCIUM ION
HOH
water
DNA synthesizer
32630
synthetic
sample
DNA synthesizer
32630
synthetic
sample
3OJS
PDB ENTRY 3OJS
PDB
experimental model
MG
902
4
MG
MG
901
A
0R7
1
5
0R7
0R7
902
A
GOL
1
6
GOL
GOL
903
A
PGE
1
7
PGE
PGE
904
A
GOL
1
6
GOL
GOL
905
A
GOL
1
6
GOL
GOL
906
A
EDO
1
8
EDO
EDO
907
A
CA
1
9
CA
CA
908
A
MO5
1
4
MG
MG
201
B
GOL
1
6
GOL
GOL
301
C
MO5
1
4
MG
MG
302
C
EDO
1
8
EDO
EDO
303
C
HOH
2
10
HOH
HOH
1001
A
HOH
3
10
HOH
HOH
1002
A
HOH
4
10
HOH
HOH
1003
A
HOH
5
10
HOH
HOH
1004
A
HOH
6
10
HOH
HOH
1005
A
HOH
7
10
HOH
HOH
1006
A
HOH
9
10
HOH
HOH
1007
A
HOH
10
10
HOH
HOH
1008
A
HOH
11
10
HOH
HOH
1009
A
HOH
14
10
HOH
HOH
1010
A
HOH
16
10
HOH
HOH
1011
A
HOH
17
10
HOH
HOH
1012
A
HOH
18
10
HOH
HOH
1013
A
HOH
20
10
HOH
HOH
1014
A
HOH
21
10
HOH
HOH
1015
A
HOH
22
10
HOH
HOH
1016
A
HOH
23
10
HOH
HOH
1017
A
HOH
24
10
HOH
HOH
1018
A
HOH
27
10
HOH
HOH
1019
A
HOH
30
10
HOH
HOH
1020
A
HOH
31
10
HOH
HOH
1021
A
HOH
32
10
HOH
HOH
1022
A
HOH
33
10
HOH
HOH
1023
A
HOH
34
10
HOH
HOH
1024
A
HOH
36
10
HOH
HOH
1025
A
HOH
37
10
HOH
HOH
1026
A
HOH
38
10
HOH
HOH
1027
A
HOH
39
10
HOH
HOH
1028
A
HOH
40
10
HOH
HOH
1029
A
HOH
41
10
HOH
HOH
1030
A
HOH
42
10
HOH
HOH
1031
A
HOH
43
10
HOH
HOH
1032
A
HOH
44
10
HOH
HOH
1033
A
HOH
46
10
HOH
HOH
1034
A
HOH
48
10
HOH
HOH
1035
A
HOH
51
10
HOH
HOH
1036
A
HOH
52
10
HOH
HOH
1037
A
HOH
54
10
HOH
HOH
1038
A
HOH
56
10
HOH
HOH
1039
A
HOH
57
10
HOH
HOH
1040
A
HOH
58
10
HOH
HOH
1041
A
HOH
59
10
HOH
HOH
1042
A
HOH
60
10
HOH
HOH
1043
A
HOH
61
10
HOH
HOH
1044
A
HOH
62
10
HOH
HOH
1045
A
HOH
63
10
HOH
HOH
1046
A
HOH
64
10
HOH
HOH
1047
A
HOH
65
10
HOH
HOH
1048
A
HOH
66
10
HOH
HOH
1049
A
HOH
67
10
HOH
HOH
1050
A
HOH
69
10
HOH
HOH
1051
A
HOH
70
10
HOH
HOH
1052
A
HOH
71
10
HOH
HOH
1053
A
HOH
72
10
HOH
HOH
1054
A
HOH
73
10
HOH
HOH
1055
A
HOH
74
10
HOH
HOH
1056
A
HOH
75
10
HOH
HOH
1057
A
HOH
79
10
HOH
HOH
1058
A
HOH
81
10
HOH
HOH
1059
A
HOH
82
10
HOH
HOH
1060
A
HOH
83
10
HOH
HOH
1061
A
HOH
84
10
HOH
HOH
1062
A
HOH
85
10
HOH
HOH
1063
A
HOH
86
10
HOH
HOH
1064
A
HOH
87
10
HOH
HOH
1065
A
HOH
88
10
HOH
HOH
1066
A
HOH
89
10
HOH
HOH
1067
A
HOH
90
10
HOH
HOH
1068
A
HOH
92
10
HOH
HOH
1069
A
HOH
93
10
HOH
HOH
1070
A
HOH
94
10
HOH
HOH
1071
A
HOH
95
10
HOH
HOH
1072
A
HOH
98
10
HOH
HOH
1073
A
HOH
101
10
HOH
HOH
1074
A
HOH
102
10
HOH
HOH
1075
A
HOH
103
10
HOH
HOH
1076
A
HOH
104
10
HOH
HOH
1077
A
HOH
105
10
HOH
HOH
1078
A
HOH
109
10
HOH
HOH
1079
A
HOH
110
10
HOH
HOH
1080
A
HOH
111
10
HOH
HOH
1081
A
HOH
112
10
HOH
HOH
1082
A
HOH
113
10
HOH
HOH
1083
A
HOH
114
10
HOH
HOH
1084
A
HOH
115
10
HOH
HOH
1085
A
HOH
116
10
HOH
HOH
1086
A
HOH
118
10
HOH
HOH
1087
A
HOH
119
10
HOH
HOH
1088
A
HOH
122
10
HOH
HOH
1089
A
HOH
123
10
HOH
HOH
1090
A
HOH
124
10
HOH
HOH
1091
A
HOH
125
10
HOH
HOH
1092
A
HOH
126
10
HOH
HOH
1093
A
HOH
127
10
HOH
HOH
1094
A
HOH
128
10
HOH
HOH
1095
A
HOH
129
10
HOH
HOH
1096
A
HOH
131
10
HOH
HOH
1097
A
HOH
132
10
HOH
HOH
1098
A
HOH
134
10
HOH
HOH
1099
A
HOH
135
10
HOH
HOH
1100
A
HOH
136
10
HOH
HOH
1101
A
HOH
139
10
HOH
HOH
1102
A
HOH
140
10
HOH
HOH
1103
A
HOH
141
10
HOH
HOH
1104
A
HOH
142
10
HOH
HOH
1105
A
HOH
144
10
HOH
HOH
1106
A
HOH
145
10
HOH
HOH
1107
A
HOH
147
10
HOH
HOH
1108
A
HOH
148
10
HOH
HOH
1109
A
HOH
149
10
HOH
HOH
1110
A
HOH
151
10
HOH
HOH
1111
A
HOH
153
10
HOH
HOH
1112
A
HOH
155
10
HOH
HOH
1113
A
HOH
156
10
HOH
HOH
1114
A
HOH
157
10
HOH
HOH
1115
A
HOH
158
10
HOH
HOH
1116
A
HOH
160
10
HOH
HOH
1117
A
HOH
161
10
HOH
HOH
1118
A
HOH
162
10
HOH
HOH
1119
A
HOH
163
10
HOH
HOH
1120
A
HOH
164
10
HOH
HOH
1121
A
HOH
166
10
HOH
HOH
1122
A
HOH
167
10
HOH
HOH
1123
A
HOH
169
10
HOH
HOH
1124
A
HOH
170
10
HOH
HOH
1125
A
HOH
171
10
HOH
HOH
1126
A
HOH
172
10
HOH
HOH
1127
A
HOH
173
10
HOH
HOH
1128
A
HOH
174
10
HOH
HOH
1129
A
HOH
175
10
HOH
HOH
1130
A
HOH
176
10
HOH
HOH
1131
A
HOH
177
10
HOH
HOH
1132
A
HOH
178
10
HOH
HOH
1133
A
HOH
179
10
HOH
HOH
1134
A
HOH
181
10
HOH
HOH
1135
A
HOH
182
10
HOH
HOH
1136
A
HOH
183
10
HOH
HOH
1137
A
HOH
185
10
HOH
HOH
1138
A
HOH
186
10
HOH
HOH
1139
A
HOH
187
10
HOH
HOH
1140
A
HOH
188
10
HOH
HOH
1141
A
HOH
189
10
HOH
HOH
1142
A
HOH
190
10
HOH
HOH
1143
A
HOH
191
10
HOH
HOH
1144
A
HOH
192
10
HOH
HOH
1145
A
HOH
193
10
HOH
HOH
1146
A
HOH
194
10
HOH
HOH
1147
A
HOH
195
10
HOH
HOH
1148
A
HOH
196
10
HOH
HOH
1149
A
HOH
197
10
HOH
HOH
1150
A
HOH
198
10
HOH
HOH
1151
A
HOH
199
10
HOH
HOH
1152
A
HOH
200
10
HOH
HOH
1153
A
HOH
202
10
HOH
HOH
1154
A
HOH
203
10
HOH
HOH
1155
A
HOH
204
10
HOH
HOH
1156
A
HOH
205
10
HOH
HOH
1157
A
HOH
206
10
HOH
HOH
1158
A
HOH
208
10
HOH
HOH
1159
A
HOH
209
10
HOH
HOH
1160
A
HOH
210
10
HOH
HOH
1161
A
HOH
211
10
HOH
HOH
1162
A
HOH
212
10
HOH
HOH
1163
A
HOH
213
10
HOH
HOH
1164
A
HOH
214
10
HOH
HOH
1165
A
HOH
215
10
HOH
HOH
1166
A
HOH
216
10
HOH
HOH
1167
A
HOH
217
10
HOH
HOH
1168
A
HOH
219
10
HOH
HOH
1169
A
HOH
220
10
HOH
HOH
1170
A
HOH
221
10
HOH
HOH
1171
A
HOH
222
10
HOH
HOH
1172
A
HOH
223
10
HOH
HOH
1173
A
HOH
224
10
HOH
HOH
1174
A
HOH
225
10
HOH
HOH
1175
A
HOH
226
10
HOH
HOH
1176
A
HOH
228
10
HOH
HOH
1177
A
HOH
229
10
HOH
HOH
1178
A
HOH
230
10
HOH
HOH
1179
A
HOH
232
10
HOH
HOH
1180
A
HOH
233
10
HOH
HOH
1181
A
HOH
235
10
HOH
HOH
1182
A
HOH
236
10
HOH
HOH
1183
A
HOH
237
10
HOH
HOH
1184
A
HOH
238
10
HOH
HOH
1185
A
HOH
239
10
HOH
HOH
1186
A
HOH
240
10
HOH
HOH
1187
A
HOH
241
10
HOH
HOH
1188
A
HOH
243
10
HOH
HOH
1189
A
HOH
244
10
HOH
HOH
1190
A
HOH
1191
10
HOH
HOH
1191
A
HOH
249
10
HOH
HOH
1192
A
HOH
250
10
HOH
HOH
1193
A
HOH
251
10
HOH
HOH
1194
A
HOH
252
10
HOH
HOH
1195
A
HOH
253
10
HOH
HOH
1196
A
HOH
254
10
HOH
HOH
1197
A
HOH
255
10
HOH
HOH
1198
A
HOH
256
10
HOH
HOH
1199
A
HOH
257
10
HOH
HOH
1200
A
HOH
258
10
HOH
HOH
1201
A
HOH
259
10
HOH
HOH
1202
A
HOH
260
10
HOH
HOH
1203
A
HOH
261
10
HOH
HOH
1204
A
HOH
265
10
HOH
HOH
1205
A
HOH
266
10
HOH
HOH
1206
A
HOH
267
10
HOH
HOH
1207
A
HOH
268
10
HOH
HOH
1208
A
HOH
269
10
HOH
HOH
1209
A
HOH
270
10
HOH
HOH
1210
A
HOH
271
10
HOH
HOH
1211
A
HOH
272
10
HOH
HOH
1212
A
HOH
275
10
HOH
HOH
1213
A
HOH
277
10
HOH
HOH
1214
A
HOH
278
10
HOH
HOH
1215
A
HOH
279
10
HOH
HOH
1216
A
HOH
281
10
HOH
HOH
1217
A
HOH
282
10
HOH
HOH
1218
A
HOH
284
10
HOH
HOH
1219
A
HOH
285
10
HOH
HOH
1220
A
HOH
286
10
HOH
HOH
1221
A
HOH
287
10
HOH
HOH
1222
A
HOH
288
10
HOH
HOH
1223
A
HOH
289
10
HOH
HOH
1224
A
HOH
291
10
HOH
HOH
1225
A
HOH
294
10
HOH
HOH
1226
A
HOH
295
10
HOH
HOH
1227
A
HOH
299
10
HOH
HOH
1228
A
HOH
301
10
HOH
HOH
1229
A
HOH
302
10
HOH
HOH
1230
A
HOH
303
10
HOH
HOH
1231
A
HOH
305
10
HOH
HOH
1232
A
HOH
306
10
HOH
HOH
1233
A
HOH
307
10
HOH
HOH
1234
A
HOH
310
10
HOH
HOH
1235
A
HOH
311
10
HOH
HOH
1236
A
HOH
312
10
HOH
HOH
1237
A
HOH
314
10
HOH
HOH
1238
A
HOH
317
10
HOH
HOH
1239
A
HOH
319
10
HOH
HOH
1240
A
HOH
321
10
HOH
HOH
1241
A
HOH
8
10
HOH
HOH
301
B
HOH
12
10
HOH
HOH
302
B
HOH
26
10
HOH
HOH
303
B
HOH
28
10
HOH
HOH
304
B
HOH
29
10
HOH
HOH
305
B
HOH
50
10
HOH
HOH
306
B
HOH
53
10
HOH
HOH
307
B
HOH
68
10
HOH
HOH
308
B
HOH
76
10
HOH
HOH
309
B
HOH
78
10
HOH
HOH
310
B
HOH
91
10
HOH
HOH
311
B
HOH
96
10
HOH
HOH
312
B
HOH
97
10
HOH
HOH
313
B
HOH
99
10
HOH
HOH
314
B
HOH
100
10
HOH
HOH
315
B
HOH
108
10
HOH
HOH
316
B
HOH
121
10
HOH
HOH
317
B
HOH
133
10
HOH
HOH
318
B
HOH
152
10
HOH
HOH
319
B
HOH
154
10
HOH
HOH
320
B
HOH
159
10
HOH
HOH
321
B
HOH
168
10
HOH
HOH
322
B
HOH
231
10
HOH
HOH
323
B
HOH
234
10
HOH
HOH
324
B
HOH
248
10
HOH
HOH
325
B
HOH
262
10
HOH
HOH
326
B
HOH
263
10
HOH
HOH
327
B
HOH
273
10
HOH
HOH
328
B
HOH
274
10
HOH
HOH
329
B
HOH
296
10
HOH
HOH
330
B
HOH
300
10
HOH
HOH
331
B
HOH
309
10
HOH
HOH
332
B
HOH
313
10
HOH
HOH
333
B
HOH
318
10
HOH
HOH
334
B
MO5
1
10
HOH
HOH
335
B
MO5
1
10
HOH
HOH
336
B
MO5
1
10
HOH
HOH
337
B
MO5
1
10
HOH
HOH
338
B
HOH
1
10
HOH
HOH
401
C
HOH
13
10
HOH
HOH
402
C
HOH
15
10
HOH
HOH
403
C
HOH
19
10
HOH
HOH
404
C
HOH
25
10
HOH
HOH
405
C
HOH
35
10
HOH
HOH
406
C
HOH
45
10
HOH
HOH
407
C
HOH
47
10
HOH
HOH
408
C
HOH
49
10
HOH
HOH
409
C
HOH
55
10
HOH
HOH
410
C
HOH
77
10
HOH
HOH
411
C
HOH
80
10
HOH
HOH
412
C
HOH
106
10
HOH
HOH
413
C
HOH
117
10
HOH
HOH
414
C
HOH
120
10
HOH
HOH
415
C
HOH
130
10
HOH
HOH
416
C
HOH
137
10
HOH
HOH
417
C
HOH
138
10
HOH
HOH
418
C
HOH
143
10
HOH
HOH
419
C
HOH
146
10
HOH
HOH
420
C
HOH
150
10
HOH
HOH
421
C
HOH
165
10
HOH
HOH
422
C
HOH
180
10
HOH
HOH
423
C
HOH
184
10
HOH
HOH
424
C
HOH
201
10
HOH
HOH
425
C
HOH
207
10
HOH
HOH
426
C
HOH
218
10
HOH
HOH
427
C
HOH
227
10
HOH
HOH
428
C
HOH
242
10
HOH
HOH
429
C
HOH
245
10
HOH
HOH
430
C
HOH
276
10
HOH
HOH
431
C
HOH
280
10
HOH
HOH
432
C
HOH
283
10
HOH
HOH
433
C
HOH
292
10
HOH
HOH
434
C
HOH
298
10
HOH
HOH
435
C
HOH
304
10
HOH
HOH
436
C
HOH
308
10
HOH
HOH
437
C
HOH
320
10
HOH
HOH
438
C
MO5
1
10
HOH
HOH
439
C
MO5
1
10
HOH
HOH
440
C
MO5
1
10
HOH
HOH
441
C
MO5
1
10
HOH
HOH
442
C
MO5
1
10
HOH
HOH
443
C
MO5
1
10
HOH
HOH
444
C
n
1
293
A
LEU
294
n
2
LEU
294
A
GLU
295
n
3
GLU
295
A
GLU
296
n
4
GLU
296
A
ALA
297
n
5
ALA
297
A
PRO
298
n
6
PRO
298
A
TRP
299
n
7
TRP
299
A
PRO
300
n
8
PRO
300
A
PRO
301
n
9
PRO
301
A
PRO
302
n
10
PRO
302
A
GLU
303
n
11
GLU
303
A
GLY
304
n
12
GLY
304
A
ALA
305
n
13
ALA
305
A
PHE
306
n
14
PHE
306
A
VAL
307
n
15
VAL
307
A
GLY
308
n
16
GLY
308
A
PHE
309
n
17
PHE
309
A
VAL
310
n
18
VAL
310
A
LEU
311
n
19
LEU
311
A
SER
312
n
20
SER
312
A
ARG
313
n
21
ARG
313
A
LYS
314
n
22
LYS
314
A
GLU
315
n
23
GLU
315
A
PRO
316
n
24
PRO
316
A
MET
317
n
25
MET
317
A
TRP
318
n
26
TRP
318
A
ALA
319
n
27
ALA
319
A
ASP
320
n
28
ASP
320
A
LEU
321
n
29
LEU
321
A
LEU
322
n
30
LEU
322
A
ALA
323
n
31
ALA
323
A
LEU
324
n
32
LEU
324
A
ALA
325
n
33
ALA
325
A
ALA
326
n
34
ALA
326
A
ALA
327
n
35
ALA
327
A
ARG
328
n
36
ARG
328
A
GLY
329
n
37
GLY
329
A
GLY
330
n
38
GLY
330
A
ARG
331
n
39
ARG
331
A
VAL
332
n
40
VAL
332
A
HIS
333
n
41
HIS
333
A
ARG
334
n
42
ARG
334
A
ALA
335
n
43
ALA
335
A
PRO
336
n
44
PRO
336
A
GLU
337
n
45
GLU
337
A
PRO
338
n
46
PRO
338
A
TYR
339
n
47
TYR
339
A
LYS
340
n
48
LYS
340
A
ALA
341
n
49
ALA
341
A
LEU
342
n
50
LEU
342
A
ARG
343
n
51
ARG
343
A
ASP
344
n
52
ASP
344
A
LEU
345
n
53
LEU
345
A
LYS
346
n
54
LYS
346
A
GLU
347
n
55
GLU
347
A
ALA
348
n
56
ALA
348
A
ARG
349
n
57
ARG
349
A
GLY
350
n
58
GLY
350
A
LEU
351
n
59
LEU
351
A
LEU
352
n
60
LEU
352
A
ALA
353
n
61
ALA
353
A
LYS
354
n
62
LYS
354
A
ASP
355
n
63
ASP
355
A
LEU
356
n
64
LEU
356
A
SER
357
n
65
SER
357
A
VAL
358
n
66
VAL
358
A
LEU
359
n
67
LEU
359
A
ALA
360
n
68
ALA
360
A
LEU
361
n
69
LEU
361
A
ARG
362
n
70
ARG
362
A
GLU
363
n
71
GLU
363
A
GLY
364
n
72
GLY
364
A
LEU
365
n
73
LEU
365
A
GLY
366
n
74
GLY
366
A
LEU
367
n
75
LEU
367
A
PRO
368
n
76
PRO
368
A
PRO
369
n
77
PRO
369
A
GLY
370
n
78
GLY
370
A
ASP
371
n
79
ASP
371
A
ASP
372
n
80
ASP
372
A
PRO
373
n
81
PRO
373
A
MET
374
n
82
MET
374
A
LEU
375
n
83
LEU
375
A
LEU
376
n
84
LEU
376
A
ALA
377
n
85
ALA
377
A
TYR
378
n
86
TYR
378
A
LEU
379
n
87
LEU
379
A
LEU
380
n
88
LEU
380
A
ASP
381
n
89
ASP
381
A
PRO
382
n
90
PRO
382
A
SER
383
n
91
SER
383
A
ASN
384
n
92
ASN
384
A
THR
385
n
93
THR
385
A
THR
386
n
94
THR
386
A
PRO
387
n
95
PRO
387
A
GLU
388
n
96
GLU
388
A
GLY
389
n
97
GLY
389
A
VAL
390
n
98
VAL
390
A
ALA
391
n
99
ALA
391
A
ARG
392
n
100
ARG
392
A
ARG
393
n
101
ARG
393
A
TYR
394
n
102
TYR
394
A
GLY
395
n
103
GLY
395
A
GLY
396
n
104
GLY
396
A
GLU
397
n
105
GLU
397
A
TRP
398
n
106
TRP
398
A
THR
399
n
107
THR
399
A
GLU
400
n
108
GLU
400
A
GLU
401
n
109
GLU
401
A
ALA
402
n
110
ALA
402
A
GLY
403
n
111
GLY
403
A
GLU
404
n
112
GLU
404
A
ARG
405
n
113
ARG
405
A
ALA
406
n
114
ALA
406
A
ALA
407
n
115
ALA
407
A
LEU
408
n
116
LEU
408
A
SER
409
n
117
SER
409
A
GLU
410
n
118
GLU
410
A
ARG
411
n
119
ARG
411
A
LEU
412
n
120
LEU
412
A
PHE
413
n
121
PHE
413
A
ALA
414
n
122
ALA
414
A
ASN
415
n
123
ASN
415
A
LEU
416
n
124
LEU
416
A
TRP
417
n
125
TRP
417
A
GLY
418
n
126
GLY
418
A
ARG
419
n
127
ARG
419
A
LEU
420
n
128
LEU
420
A
GLU
421
n
129
GLU
421
A
GLY
422
n
130
GLY
422
A
GLU
423
n
131
GLU
423
A
GLU
424
n
132
GLU
424
A
ARG
425
n
133
ARG
425
A
LEU
426
n
134
LEU
426
A
LEU
427
n
135
LEU
427
A
TRP
428
n
136
TRP
428
A
LEU
429
n
137
LEU
429
A
TYR
430
n
138
TYR
430
A
ARG
431
n
139
ARG
431
A
GLU
432
n
140
GLU
432
A
VAL
433
n
141
VAL
433
A
GLU
434
n
142
GLU
434
A
ARG
435
n
143
ARG
435
A
PRO
436
n
144
PRO
436
A
LEU
437
n
145
LEU
437
A
SER
438
n
146
SER
438
A
ALA
439
n
147
ALA
439
A
VAL
440
n
148
VAL
440
A
LEU
441
n
149
LEU
441
A
ALA
442
n
150
ALA
442
A
HIS
443
n
151
HIS
443
A
MET
444
n
152
MET
444
A
GLU
445
n
153
GLU
445
A
ALA
446
n
154
ALA
446
A
THR
447
n
155
THR
447
A
GLY
448
n
156
GLY
448
A
VAL
449
n
157
VAL
449
A
ARG
450
n
158
ARG
450
A
LEU
451
n
159
LEU
451
A
ASP
452
n
160
ASP
452
A
VAL
453
n
161
VAL
453
A
ALA
454
n
162
ALA
454
A
TYR
455
n
163
TYR
455
A
LEU
456
n
164
LEU
456
A
ARG
457
n
165
ARG
457
A
ALA
458
n
166
ALA
458
A
LEU
459
n
167
LEU
459
A
SER
460
n
168
SER
460
A
LEU
461
n
169
LEU
461
A
GLU
462
n
170
GLU
462
A
VAL
463
n
171
VAL
463
A
ALA
464
n
172
ALA
464
A
GLU
465
n
173
GLU
465
A
GLU
466
n
174
GLU
466
A
ILE
467
n
175
ILE
467
A
ALA
468
n
176
ALA
468
A
ARG
469
n
177
ARG
469
A
LEU
470
n
178
LEU
470
A
GLU
471
n
179
GLU
471
A
ALA
472
n
180
ALA
472
A
GLU
473
n
181
GLU
473
A
VAL
474
n
182
VAL
474
A
PHE
475
n
183
PHE
475
A
ARG
476
n
184
ARG
476
A
LEU
477
n
185
LEU
477
A
ALA
478
n
186
ALA
478
A
GLY
479
n
187
GLY
479
A
HIS
480
n
188
HIS
480
A
PRO
481
n
189
PRO
481
A
PHE
482
n
190
PHE
482
A
ASN
483
n
191
ASN
483
A
LEU
484
n
192
LEU
484
A
ASN
485
n
193
ASN
485
A
SER
486
n
194
SER
486
A
ARG
487
n
195
ARG
487
A
ASP
488
n
196
ASP
488
A
GLN
489
n
197
GLN
489
A
LEU
490
n
198
LEU
490
A
GLU
491
n
199
GLU
491
A
ARG
492
n
200
ARG
492
A
VAL
493
n
201
VAL
493
A
LEU
494
n
202
LEU
494
A
PHE
495
n
203
PHE
495
A
ASP
496
n
204
ASP
496
A
GLU
497
n
205
GLU
497
A
LEU
498
n
206
LEU
498
A
GLY
499
n
207
GLY
499
A
LEU
500
n
208
LEU
500
A
PRO
501
n
209
PRO
501
A
ALA
502
n
210
ALA
502
A
ILE
503
n
211
ILE
503
A
GLY
504
n
212
GLY
504
A
LYS
505
n
213
LYS
505
A
THR
506
n
214
THR
506
A
GLU
507
n
215
GLU
507
A
LYS
508
n
216
LYS
508
A
THR
509
n
217
THR
509
A
GLY
510
n
218
GLY
510
A
LYS
511
n
219
LYS
511
A
ARG
512
n
220
ARG
512
A
SER
513
n
221
SER
513
A
THR
514
n
222
THR
514
A
SER
515
n
223
SER
515
A
ALA
516
n
224
ALA
516
A
ALA
517
n
225
ALA
517
A
VAL
518
n
226
VAL
518
A
LEU
519
n
227
LEU
519
A
GLU
520
n
228
GLU
520
A
ALA
521
n
229
ALA
521
A
LEU
522
n
230
LEU
522
A
ARG
523
n
231
ARG
523
A
GLU
524
n
232
GLU
524
A
ALA
525
n
233
ALA
525
A
HIS
526
n
234
HIS
526
A
PRO
527
n
235
PRO
527
A
ILE
528
n
236
ILE
528
A
VAL
529
n
237
VAL
529
A
GLU
530
n
238
GLU
530
A
LYS
531
n
239
LYS
531
A
ILE
532
n
240
ILE
532
A
LEU
533
n
241
LEU
533
A
GLN
534
n
242
GLN
534
A
TYR
535
n
243
TYR
535
A
ARG
536
n
244
ARG
536
A
GLU
537
n
245
GLU
537
A
LEU
538
n
246
LEU
538
A
THR
539
n
247
THR
539
A
LYS
540
n
248
LYS
540
A
LEU
541
n
249
LEU
541
A
LYS
542
n
250
LYS
542
A
SER
543
n
251
SER
543
A
THR
544
n
252
THR
544
A
TYR
545
n
253
TYR
545
A
ILE
546
n
254
ILE
546
A
ASP
547
n
255
ASP
547
A
PRO
548
n
256
PRO
548
A
LEU
549
n
257
LEU
549
A
PRO
550
n
258
PRO
550
A
ASP
551
n
259
ASP
551
A
LEU
552
n
260
LEU
552
A
ILE
553
n
261
ILE
553
A
HIS
554
n
262
HIS
554
A
PRO
555
n
263
PRO
555
A
ARG
556
n
264
ARG
556
A
THR
557
n
265
THR
557
A
GLY
558
n
266
GLY
558
A
ARG
559
n
267
ARG
559
A
LEU
560
n
268
LEU
560
A
HIS
561
n
269
HIS
561
A
THR
562
n
270
THR
562
A
ARG
563
n
271
ARG
563
A
PHE
564
n
272
PHE
564
A
ASN
565
n
273
ASN
565
A
GLN
566
n
274
GLN
566
A
THR
567
n
275
THR
567
A
ALA
568
n
276
ALA
568
A
THR
569
n
277
THR
569
A
ALA
570
n
278
ALA
570
A
THR
571
n
279
THR
571
A
GLY
572
n
280
GLY
572
A
ARG
573
n
281
ARG
573
A
LEU
574
n
282
LEU
574
A
SER
575
n
283
SER
575
A
SER
576
n
284
SER
576
A
SER
577
n
285
SER
577
A
ASP
578
n
286
ASP
578
A
PRO
579
n
287
PRO
579
A
ASN
580
n
288
ASN
580
A
LEU
581
n
289
LEU
581
A
GLN
582
n
290
GLN
582
A
ASN
583
n
291
ASN
583
A
ILE
584
n
292
ILE
584
A
PRO
585
n
293
PRO
585
A
VAL
586
n
294
VAL
586
A
ARG
587
n
295
ARG
587
A
THR
588
n
296
THR
588
A
PRO
589
n
297
PRO
589
A
LEU
590
n
298
LEU
590
A
GLY
591
n
299
GLY
591
A
GLN
592
n
300
GLN
592
A
ARG
593
n
301
ARG
593
A
ILE
594
n
302
ILE
594
A
ARG
595
n
303
ARG
595
A
ARG
596
n
304
ARG
596
A
ALA
597
n
305
ALA
597
A
PHE
598
n
306
PHE
598
A
ILE
599
n
307
ILE
599
A
ALA
600
n
308
ALA
600
A
GLU
601
n
309
GLU
601
A
GLU
602
n
310
GLU
602
A
GLY
603
n
311
GLY
603
A
TRP
604
n
312
TRP
604
A
LEU
605
n
313
LEU
605
A
LEU
606
n
314
LEU
606
A
VAL
607
n
315
VAL
607
A
ALA
608
n
316
ALA
608
A
LEU
609
n
317
LEU
609
A
ASP
610
n
318
ASP
610
A
TYR
611
n
319
TYR
611
A
SER
612
n
320
SER
612
A
GLN
613
n
321
GLN
613
A
ILE
614
n
322
ILE
614
A
GLU
615
n
323
GLU
615
A
LEU
616
n
324
LEU
616
A
ARG
617
n
325
ARG
617
A
VAL
618
n
326
VAL
618
A
LEU
619
n
327
LEU
619
A
ALA
620
n
328
ALA
620
A
HIS
621
n
329
HIS
621
A
LEU
622
n
330
LEU
622
A
SER
623
n
331
SER
623
A
GLY
624
n
332
GLY
624
A
ASP
625
n
333
ASP
625
A
GLU
626
n
334
GLU
626
A
ASN
627
n
335
ASN
627
A
LEU
628
n
336
LEU
628
A
ILE
629
n
337
ILE
629
A
ARG
630
n
338
ARG
630
A
VAL
631
n
339
VAL
631
A
PHE
632
n
340
PHE
632
A
GLN
633
n
341
GLN
633
A
GLU
634
n
342
GLU
634
A
GLY
635
n
343
GLY
635
A
ARG
636
n
344
ARG
636
A
ASP
637
n
345
ASP
637
A
ILE
638
n
346
ILE
638
A
HIS
639
n
347
HIS
639
A
THR
640
n
348
THR
640
A
GLU
641
n
349
GLU
641
A
THR
642
n
350
THR
642
A
ALA
643
n
351
ALA
643
A
SER
644
n
352
SER
644
A
TRP
645
n
353
TRP
645
A
MET
646
n
354
MET
646
A
PHE
647
n
355
PHE
647
A
GLY
648
n
356
GLY
648
A
VAL
649
n
357
VAL
649
A
PRO
650
n
358
PRO
650
A
ARG
651
n
359
ARG
651
A
GLU
652
n
360
GLU
652
A
ALA
653
n
361
ALA
653
A
VAL
654
n
362
VAL
654
A
ASP
655
n
363
ASP
655
A
PRO
656
n
364
PRO
656
A
LEU
657
n
365
LEU
657
A
MET
658
n
366
MET
658
A
ARG
659
n
367
ARG
659
A
ARG
660
n
368
ARG
660
A
ALA
661
n
369
ALA
661
A
ALA
662
n
370
ALA
662
A
LYS
663
n
371
LYS
663
A
THR
664
n
372
THR
664
A
ILE
665
n
373
ILE
665
A
ASN
666
n
374
ASN
666
A
PHE
667
n
375
PHE
667
A
GLY
668
n
376
GLY
668
A
VAL
669
n
377
VAL
669
A
LEU
670
n
378
LEU
670
A
TYR
671
n
379
TYR
671
A
GLY
672
n
380
GLY
672
A
MET
673
n
381
MET
673
A
SER
674
n
382
SER
674
A
ALA
675
n
383
ALA
675
A
HIS
676
n
384
HIS
676
A
ARG
677
n
385
ARG
677
A
LEU
678
n
386
LEU
678
A
SER
679
n
387
SER
679
A
GLN
680
n
388
GLN
680
A
GLU
681
n
389
GLU
681
A
LEU
682
n
390
LEU
682
A
ALA
683
n
391
ALA
683
A
ILE
684
n
392
ILE
684
A
PRO
685
n
393
PRO
685
A
TYR
686
n
394
TYR
686
A
GLU
687
n
395
GLU
687
A
GLU
688
n
396
GLU
688
A
ALA
689
n
397
ALA
689
A
GLN
690
n
398
GLN
690
A
ALA
691
n
399
ALA
691
A
PHE
692
n
400
PHE
692
A
ILE
693
n
401
ILE
693
A
GLU
694
n
402
GLU
694
A
ARG
695
n
403
ARG
695
A
TYR
696
n
404
TYR
696
A
PHE
697
n
405
PHE
697
A
GLN
698
n
406
GLN
698
A
SER
699
n
407
SER
699
A
PHE
700
n
408
PHE
700
A
PRO
701
n
409
PRO
701
A
LYS
702
n
410
LYS
702
A
VAL
703
n
411
VAL
703
A
ARG
704
n
412
ARG
704
A
ALA
705
n
413
ALA
705
A
TRP
706
n
414
TRP
706
A
ILE
707
n
415
ILE
707
A
GLU
708
n
416
GLU
708
A
LYS
709
n
417
LYS
709
A
THR
710
n
418
THR
710
A
LEU
711
n
419
LEU
711
A
GLU
712
n
420
GLU
712
A
GLU
713
n
421
GLU
713
A
GLY
714
n
422
GLY
714
A
ARG
715
n
423
ARG
715
A
ARG
716
n
424
ARG
716
A
ARG
717
n
425
ARG
717
A
GLY
718
n
426
GLY
718
A
TYR
719
n
427
TYR
719
A
VAL
720
n
428
VAL
720
A
GLU
721
n
429
GLU
721
A
THR
722
n
430
THR
722
A
LEU
723
n
431
LEU
723
A
PHE
724
n
432
PHE
724
A
GLY
725
n
433
GLY
725
A
ARG
726
n
434
ARG
726
A
ARG
727
n
435
ARG
727
A
ARG
728
n
436
ARG
728
A
TYR
729
n
437
TYR
729
A
VAL
730
n
438
VAL
730
A
PRO
731
n
439
PRO
731
A
ASP
732
n
440
ASP
732
A
LEU
733
n
441
LEU
733
A
GLU
734
n
442
GLU
734
A
ALA
735
n
443
ALA
735
A
ARG
736
n
444
ARG
736
A
VAL
737
n
445
VAL
737
A
LYS
738
n
446
LYS
738
A
SER
739
n
447
SER
739
A
VAL
740
n
448
VAL
740
A
ARG
741
n
449
ARG
741
A
GLU
742
n
450
GLU
742
A
ALA
743
n
451
ALA
743
A
ALA
744
n
452
ALA
744
A
GLU
745
n
453
GLU
745
A
ARG
746
n
454
ARG
746
A
MET
747
n
455
MET
747
A
ALA
748
n
456
ALA
748
A
PHE
749
n
457
PHE
749
A
ASN
750
n
458
ASN
750
A
MET
751
n
459
MET
751
A
PRO
752
n
460
PRO
752
A
VAL
753
n
461
VAL
753
A
GLN
754
n
462
GLN
754
A
GLY
755
n
463
GLY
755
A
THR
756
n
464
THR
756
A
ALA
757
n
465
ALA
757
A
ALA
758
n
466
ALA
758
A
ASP
759
n
467
ASP
759
A
LEU
760
n
468
LEU
760
A
MET
761
n
469
MET
761
A
LYS
762
n
470
LYS
762
A
LEU
763
n
471
LEU
763
A
ALA
764
n
472
ALA
764
A
MET
765
n
473
MET
765
A
VAL
766
n
474
VAL
766
A
LYS
767
n
475
LYS
767
A
LEU
768
n
476
LEU
768
A
PHE
769
n
477
PHE
769
A
PRO
770
n
478
PRO
770
A
ARG
771
n
479
ARG
771
A
LEU
772
n
480
LEU
772
A
GLU
773
n
481
GLU
773
A
GLU
774
n
482
GLU
774
A
MET
775
n
483
MET
775
A
GLY
776
n
484
GLY
776
A
ALA
777
n
485
ALA
777
A
ARG
778
n
486
ARG
778
A
MET
779
n
487
MET
779
A
LEU
780
n
488
LEU
780
A
LEU
781
n
489
LEU
781
A
GLN
782
n
490
GLN
782
A
VAL
783
n
491
VAL
783
A
HIS
784
n
492
HIS
784
A
ASP
785
n
493
ASP
785
A
GLU
786
n
494
GLU
786
A
LEU
787
n
495
LEU
787
A
VAL
788
n
496
VAL
788
A
LEU
789
n
497
LEU
789
A
GLU
790
n
498
GLU
790
A
ALA
791
n
499
ALA
791
A
PRO
792
n
500
PRO
792
A
LYS
793
n
501
LYS
793
A
GLU
794
n
502
GLU
794
A
ARG
795
n
503
ARG
795
A
ALA
796
n
504
ALA
796
A
GLU
797
n
505
GLU
797
A
ALA
798
n
506
ALA
798
A
VAL
799
n
507
VAL
799
A
ALA
800
n
508
ALA
800
A
ARG
801
n
509
ARG
801
A
LEU
802
n
510
LEU
802
A
ALA
803
n
511
ALA
803
A
LYS
804
n
512
LYS
804
A
GLU
805
n
513
GLU
805
A
VAL
806
n
514
VAL
806
A
MET
807
n
515
MET
807
A
GLU
808
n
516
GLU
808
A
GLY
809
n
517
GLY
809
A
VAL
810
n
518
VAL
810
A
TYR
811
n
519
TYR
811
A
PRO
812
n
520
PRO
812
A
LEU
813
n
521
LEU
813
A
ALA
814
n
522
ALA
814
A
VAL
815
n
523
VAL
815
A
PRO
816
n
524
PRO
816
A
LEU
817
n
525
LEU
817
A
GLU
818
n
526
GLU
818
A
VAL
819
n
527
VAL
819
A
GLU
820
n
528
GLU
820
A
VAL
821
n
529
VAL
821
A
GLY
822
n
530
GLY
822
A
ILE
823
n
531
ILE
823
A
GLY
824
n
532
GLY
824
A
GLU
825
n
533
GLU
825
A
ASP
826
n
534
ASP
826
A
TRP
827
n
535
TRP
827
A
LEU
828
n
536
LEU
828
A
SER
829
n
537
SER
829
A
ALA
830
n
538
ALA
830
A
LYS
831
n
539
LYS
831
A
GLU
832
n
540
GLU
832
A
DG
101
n
1
DG
101
B
DA
102
n
2
DA
102
B
DC
103
n
3
DC
103
B
DC
104
n
4
DC
104
B
DA
105
n
5
DA
105
B
DC
106
n
6
DC
106
B
DG
107
n
7
DG
107
B
DG
108
n
8
DG
108
B
DC
109
n
9
DC
109
B
DG
110
n
10
DG
110
B
DC
111
n
11
DC
111
B
0R8
112
n
12
0R8
112
B
n
1
201
C
n
2
202
C
n
3
203
C
DG
204
n
4
DG
204
C
DG
205
n
5
DG
205
C
DG
206
n
6
DG
206
C
DC
207
n
7
DC
207
C
DG
208
n
8
DG
208
C
DC
209
n
9
DC
209
C
DC
210
n
10
DC
210
C
DG
211
n
11
DG
211
C
DT
212
n
12
DT
212
C
DG
213
n
13
DG
213
C
DG
214
n
14
DG
214
C
DT
215
n
15
DT
215
C
DC
216
n
16
DC
216
C
1.2952
-0.2787
0.1009
2.4057
-0.0531
1.3023
0.0377
0.0541
-0.2548
-0.2331
-0.0078
-0.3006
0.2021
0.0983
-0.0092
0.2428
-0.0703
0.0536
0.1800
-0.0189
0.2399
refined
39.6541
-41.3099
-18.1133
X-RAY DIFFRACTION
1.1722
0.8312
0.0420
2.0252
0.4162
2.2516
0.0082
-0.0791
0.1730
0.0045
-0.0499
0.0883
-0.5206
-0.0101
0.0310
0.2221
-0.0289
0.0092
0.1130
0.0043
0.1890
refined
35.9605
-11.0648
1.7800
X-RAY DIFFRACTION
1.9040
0.7345
0.2599
1.6450
-1.2652
3.8707
-0.0830
-0.1555
0.2592
-0.0181
0.1950
0.3561
-0.7083
-1.1199
-0.1221
0.2502
0.1159
0.0155
0.4563
0.0230
0.2241
refined
15.0479
-21.5823
-11.6594
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resseq 294:452)
X-RAY DIFFRACTION
2
chain 'A' and (resseq 453:603)
X-RAY DIFFRACTION
3
chain 'A' and (resseq 604:832)
author_and_software_defined_assembly
PISA
3
trimeric
6950
-36
25330
A
ASP
610
A
OD2
ASP
318
1_555
A
MG
901
D
MG
MG
1_555
A
GLU
786
A
A
OE2
GLU
494
1_555
89.2
A
ASP
610
A
OD2
ASP
318
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1019
P
O
HOH
1_555
158.8
A
GLU
786
A
A
OE2
GLU
494
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1019
P
O
HOH
1_555
89.4
A
ASP
610
A
OD2
ASP
318
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1048
P
O
HOH
1_555
91.9
A
GLU
786
A
A
OE2
GLU
494
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1048
P
O
HOH
1_555
152.8
A
HOH
1019
P
O
HOH
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1048
P
O
HOH
1_555
79.9
A
ASP
610
A
OD2
ASP
318
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1129
P
O
HOH
1_555
74.9
A
GLU
786
A
A
OE2
GLU
494
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1129
P
O
HOH
1_555
84.4
A
HOH
1019
P
O
HOH
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1129
P
O
HOH
1_555
83.9
A
HOH
1048
P
O
HOH
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1129
P
O
HOH
1_555
69.8
A
ASP
610
A
OD2
ASP
318
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1196
P
O
HOH
1_555
95.5
A
GLU
786
A
A
OE2
GLU
494
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1196
P
O
HOH
1_555
87.8
A
HOH
1019
P
O
HOH
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1196
P
O
HOH
1_555
105.6
A
HOH
1048
P
O
HOH
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1196
P
O
HOH
1_555
119.1
A
HOH
1129
P
O
HOH
1_555
A
MG
901
D
MG
MG
1_555
A
HOH
1196
P
O
HOH
1_555
167.7
A
ASP
610
A
OD1
ASP
318
1_555
A
CA
908
K
CA
CA
1_555
A
TYR
611
A
O
TYR
319
1_555
78.7
A
ASP
610
A
OD1
ASP
318
1_555
A
CA
908
K
CA
CA
1_555
A
ASP
785
A
OD2
ASP
493
1_555
90.5
A
TYR
611
A
O
TYR
319
1_555
A
CA
908
K
CA
CA
1_555
A
ASP
785
A
OD2
ASP
493
1_555
91.1
A
ASP
610
A
OD1
ASP
318
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O7
0R7
1_555
95.1
A
TYR
611
A
O
TYR
319
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O7
0R7
1_555
95.6
A
ASP
785
A
OD2
ASP
493
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O7
0R7
1_555
172.0
A
ASP
610
A
OD1
ASP
318
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O9
0R7
1_555
165.3
A
TYR
611
A
O
TYR
319
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O9
0R7
1_555
88.6
A
ASP
785
A
OD2
ASP
493
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O9
0R7
1_555
97.2
A
0R7
902
E
O7
0R7
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O9
0R7
1_555
78.7
A
ASP
610
A
OD1
ASP
318
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O11
0R7
1_555
114.2
A
TYR
611
A
O
TYR
319
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O11
0R7
1_555
166.7
A
ASP
785
A
OD2
ASP
493
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O11
0R7
1_555
85.9
A
0R7
902
E
O7
0R7
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O11
0R7
1_555
86.6
A
0R7
902
E
O9
0R7
1_555
A
CA
908
K
CA
CA
1_555
A
0R7
902
E
O11
0R7
1_555
79.0
B
HOH
335
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
B
HOH
336
Q
O
HOH
1_555
179.1
B
HOH
335
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
B
HOH
337
Q
O
HOH
1_555
87.7
B
HOH
336
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
B
HOH
337
Q
O
HOH
1_555
91.5
B
HOH
335
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
B
HOH
338
Q
O
HOH
1_555
91.5
B
HOH
336
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
B
HOH
338
Q
O
HOH
1_555
88.6
B
HOH
337
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
B
HOH
338
Q
O
HOH
1_555
118.7
B
HOH
335
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
437
R
O
HOH
1_555
89.9
B
HOH
336
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
437
R
O
HOH
1_555
90.9
B
HOH
337
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
437
R
O
HOH
1_555
170.7
B
HOH
338
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
437
R
O
HOH
1_555
52.3
B
HOH
335
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
444
R
O
HOH
1_555
89.7
B
HOH
336
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
444
R
O
HOH
1_555
91.0
B
HOH
337
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
444
R
O
HOH
1_555
119.3
B
HOH
338
Q
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
444
R
O
HOH
1_555
121.9
C
HOH
437
R
O
HOH
1_555
B
MG
201
L
MG
MG
1_555
C
HOH
444
R
O
HOH
1_555
69.6
C
HOH
439
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
440
R
O
HOH
1_555
179.4
C
HOH
439
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
441
R
O
HOH
1_555
90.3
C
HOH
440
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
441
R
O
HOH
1_555
90.2
C
HOH
439
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
442
R
O
HOH
1_555
90.4
C
HOH
440
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
442
R
O
HOH
1_555
89.6
C
HOH
441
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
442
R
O
HOH
1_555
119.5
C
HOH
439
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
443
R
O
HOH
1_555
91.1
C
HOH
440
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
443
R
O
HOH
1_555
88.3
C
HOH
441
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
443
R
O
HOH
1_555
119.8
C
HOH
442
R
O
HOH
1_555
C
MG
302
N
MG
MG
1_555
C
HOH
443
R
O
HOH
1_555
120.7
B
0R8
112
B
0R8
12
DC
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
297
A
N
ALA
5
A
O
VAL
332
A
O
VAL
40
A
O
HIS
333
A
O
HIS
41
A
N
ALA
326
A
N
ALA
34
A
O
ALA
325
A
O
ALA
33
A
N
GLY
308
A
N
GLY
16
A
N
ARG
450
A
N
ARG
158
A
O
ILE
599
A
O
ILE
307
A
N
ASN
565
A
N
ASN
273
A
O
SER
575
A
O
SER
283
A
N
ARG
778
A
N
ARG
486
A
O
GLU
790
A
O
GLU
498
A
O
LEU
789
A
O
LEU
497
A
N
VAL
607
A
N
VAL
315
A
N
LEU
606
A
N
LEU
314
A
O
GLY
824
A
O
GLY
532
A
N
VAL
720
A
N
VAL
428
A
O
ARG
728
A
O
ARG
436
1
A
HOH
1175
P
HOH
1
A
HOH
1191
P
HOH
1
A
HOH
1205
P
HOH
1
A
HOH
1227
P
HOH
1
A
C1
PGE
904
G
C1
PGE
1
1
N
1
A
O1
PGE
904
G
O1
PGE
1
1
N
1
A
C2
PGE
904
G
C2
PGE
1
1
N
1
A
O4
PGE
904
G
O4
PGE
1
1
N
1
A
C6
PGE
904
G
C6
PGE
1
1
N
1
A
C5
PGE
904
G
C5
PGE
1
1
N
1
A
ALA
293
A
ALA
1
1
Y
1
C
DA
201
C
DA
1
1
Y
1
C
DA
202
C
DA
2
1
Y
1
C
DA
203
C
DA
3
1
Y
1
A
A
O10
O
0R7
HOH
902
1200
2.16
1
A
A
OE1
O
GLU
HOH
708
1166
2.18
1
2.06
0.30
108.30
110.36
B
B
B
O4'
C1'
N9
DA
DA
DA
102
102
102
N
1
-4.69
0.70
108.00
103.31
B
B
B
O4'
C1'
N9
DA
DA
DA
105
105
105
N
1
-4.60
0.70
108.00
103.40
B
B
B
O4'
C1'
N1
DC
DC
DC
106
106
106
N
1
5.34
0.30
108.30
113.64
B
B
B
O4'
C1'
N9
DG
DG
DG
108
108
108
N
1
5.16
0.30
108.30
113.46
B
B
B
O4'
C1'
N1
DC
DC
DC
109
109
109
N
1
-16.23
1.20
119.70
103.47
B
B
B
C3'
O3'
P
DC
DC
0R8
111
111
112
Y
1
12.23
1.10
110.50
122.73
B
B
B
O3'
P
OP2
DC
0R8
0R8
111
112
112
Y
1
-17.49
2.20
105.20
87.71
B
B
B
O3'
P
OP1
DC
0R8
0R8
111
112
112
Y
1
-11.26
1.50
119.60
108.34
C
C
C
OP1
P
OP2
DG
DG
DG
204
204
204
N
1
-5.57
0.70
108.00
102.43
C
C
C
O4'
C1'
N1
DT
DT
DT
212
212
212
N
1
2.99
0.30
108.30
111.29
C
C
C
O4'
C1'
N9
DG
DG
DG
214
214
214
N
1
C
C
O3'
C3'
DC
DC
210
210
-0.038
0.006
1.419
1.381
N
1
A
ASP
381
-167.08
108.64
1
A
VAL
433
-122.54
-68.45
1
A
TYR
545
-122.95
-57.47
1
A
VAL
586
-154.94
-19.20
1
A
PRO
650
-45.55
-70.63
1
A
ARG
651
178.21
-31.09
1
A
HIS
784
71.98
-67.08
1
A
TYR
811
-161.35
96.41
5.1587
-0.0000
-0.0000
5.1587
-0.0000
-5.1226
0.2157
0.1765
0.1785
1.900
47.291
2491
49722
49722
5.01
99.97
0.20
Random
1
isotropic and tls
THROUGHOUT
2.00
MOLECULAR REPLACEMENT
21.52
0.86
1.10
PDB ENTRY 3OJS
ML
FLAT BULK SOLVENT MODEL
42.089
0.351
1.900
47.291
323
5206
77
520
4286
0.007
5091
1.172
7016
16.929
1991
0.071
757
0.005
815
0.3147
0.2918
1.9366
131
2582
100.00
0.2869
0.2523
1.9761
141
2598
100.00
0.3034
0.2421
2.0191
152
2622
100.00
0.2411
0.2303
2.0660
126
2568
100.00
0.2428
0.2123
2.1177
143
2607
100.00
0.2300
0.2056
2.1749
122
2591
100.00
0.2475
0.2042
2.2389
120
2607
100.00
0.2593
0.1986
2.3112
142
2616
100.00
0.2380
0.1782
2.3938
118
2625
100.00
0.2256
0.1735
2.4897
129
2627
100.00
0.2190
0.1703
2.6030
146
2611
100.00
0.2299
0.1736
2.7402
148
2604
100.00
0.2226
0.1869
2.9118
138
2625
100.00
0.2613
0.1786
3.1366
132
2640
100.00
0.1881
0.1624
3.4522
150
2615
100.00
0.1787
0.1426
3.9515
155
2644
100.00
0.1811
0.1391
4.9776
141
2671
100.00
0.1915
0.1739
47.3052
157
2778
100.00
1.89
50
4ELV
50305
50305
0
-3
0.118
1
99.3
1.182
1.89
2.00
1.20
1
95.6
data scaling
XDS
model building
PHENIX
(phenix.refine: dev_1009)
refinement
PHENIX
(phenix.refine: dev_1009)
data reduction
XDS
phasing
PHENIX
dev_1009
Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing modified pyrimidines
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
6
N
N
6
N
N
8
N
N
9
N
N
4
N
N
6
N
N
4
N
N
8
N
N
10
N
N
10
N
N
10
N
N
A
GLU
337
A
GLU
45
HELX_P
A
ARG
343
A
ARG
51
1
1
7
A
LEU
352
A
LEU
60
HELX_P
A
GLU
363
A
GLU
71
1
2
12
A
ASP
372
A
ASP
80
HELX_P
A
ASP
381
A
ASP
89
1
3
10
A
THR
386
A
THR
94
HELX_P
A
GLY
395
A
GLY
103
1
4
10
A
GLU
401
A
GLU
109
HELX_P
A
LEU
420
A
LEU
128
1
5
20
A
GLU
423
A
GLU
131
HELX_P
A
VAL
433
A
VAL
141
1
6
11
A
VAL
433
A
VAL
141
HELX_P
A
GLY
448
A
GLY
156
1
7
16
A
ASP
452
A
ASP
160
HELX_P
A
GLY
479
A
GLY
187
1
8
28
A
SER
486
A
SER
194
HELX_P
A
ASP
496
A
ASP
204
1
9
11
A
SER
515
A
SER
223
HELX_P
A
LEU
522
A
LEU
230
1
10
8
A
PRO
527
A
PRO
235
HELX_P
A
TYR
545
A
TYR
253
1
11
19
A
PRO
548
A
PRO
256
HELX_P
A
ILE
553
A
ILE
261
5
12
6
A
THR
588
A
THR
296
HELX_P
A
ARG
596
A
ARG
304
1
13
9
A
GLN
613
A
GLN
321
HELX_P
A
GLY
624
A
GLY
332
1
14
12
A
ASP
625
A
ASP
333
HELX_P
A
GLU
634
A
GLU
342
1
15
10
A
ASP
637
A
ASP
345
HELX_P
A
GLY
648
A
GLY
356
1
16
12
A
ASP
655
A
ASP
363
HELX_P
A
TYR
671
A
TYR
379
1
17
17
A
SER
674
A
SER
382
HELX_P
A
ALA
683
A
ALA
391
1
18
10
A
PRO
685
A
PRO
393
HELX_P
A
PHE
700
A
PHE
408
1
19
16
A
PHE
700
A
PHE
408
HELX_P
A
GLY
718
A
GLY
426
1
20
19
A
PRO
731
A
PRO
439
HELX_P
A
ALA
735
A
ALA
443
5
21
5
A
VAL
737
A
VAL
445
HELX_P
A
MET
775
A
MET
483
1
22
39
A
ARG
795
A
ARG
503
HELX_P
A
GLY
809
A
GLY
517
1
23
15
A
ASP
826
A
ASP
534
HELX_P
A
LYS
831
A
LYS
539
1
24
6
covale
1.613
both
B
DC
111
B
O3'
DC
11
1_555
B
0R8
112
B
P
0R8
12
1_555
metalc
2.154
A
ASP
610
A
OD2
ASP
318
1_555
A
MG
901
D
MG
MG
1_555
metalc
2.398
A
ASP
610
A
OD1
ASP
318
1_555
A
CA
908
K
CA
CA
1_555
metalc
2.284
A
TYR
611
A
O
TYR
319
1_555
A
CA
908
K
CA
CA
1_555
metalc
2.279
A
ASP
785
A
OD2
ASP
493
1_555
A
CA
908
K
CA
CA
1_555
metalc
2.099
A
A
GLU
786
A
OE2
GLU
494
1_555
A
MG
901
D
MG
MG
1_555
metalc
2.145
A
MG
901
D
MG
MG
1_555
A
HOH
1019
P
O
HOH
1_555
metalc
2.075
A
MG
901
D
MG
MG
1_555
A
HOH
1048
P
O
HOH
1_555
metalc
2.098
A
MG
901
D
MG
MG
1_555
A
HOH
1129
P
O
HOH
1_555
metalc
2.031
A
MG
901
D
MG
MG
1_555
A
HOH
1196
P
O
HOH
1_555
metalc
2.261
A
0R7
902
E
O7
0R7
1_555
A
CA
908
K
CA
CA
1_555
metalc
2.317
A
0R7
902
E
O9
0R7
1_555
A
CA
908
K
CA
CA
1_555
metalc
2.411
A
0R7
902
E
O11
0R7
1_555
A
CA
908
K
CA
CA
1_555
metalc
2.177
B
MG
201
L
MG
MG
1_555
B
HOH
335
Q
O
HOH
1_555
metalc
2.183
B
MG
201
L
MG
MG
1_555
B
HOH
336
Q
O
HOH
1_555
metalc
2.164
B
MG
201
L
MG
MG
1_555
B
HOH
337
Q
O
HOH
1_555
metalc
2.175
B
MG
201
L
MG
MG
1_555
B
HOH
338
Q
O
HOH
1_555
metalc
2.948
B
MG
201
L
MG
MG
1_555
C
HOH
437
R
O
HOH
1_555
metalc
2.180
B
MG
201
L
MG
MG
1_555
C
HOH
444
R
O
HOH
1_555
metalc
2.179
C
MG
302
N
MG
MG
1_555
C
HOH
439
R
O
HOH
1_555
metalc
2.175
C
MG
302
N
MG
MG
1_555
C
HOH
440
R
O
HOH
1_555
metalc
2.179
C
MG
302
N
MG
MG
1_555
C
HOH
441
R
O
HOH
1_555
metalc
2.178
C
MG
302
N
MG
MG
1_555
C
HOH
442
R
O
HOH
1_555
metalc
2.180
C
MG
302
N
MG
MG
1_555
C
HOH
443
R
O
HOH
1_555
hydrog
WATSON-CRICK
B
DG
101
B
N1
DG
1
1_555
C
DC
216
C
N3
DC
16
1_555
hydrog
WATSON-CRICK
B
DG
101
B
N2
DG
1
1_555
C
DC
216
C
O2
DC
16
1_555
hydrog
WATSON-CRICK
B
DG
101
B
O6
DG
1
1_555
C
DC
216
C
N4
DC
16
1_555
hydrog
WATSON-CRICK
B
DA
102
B
N1
DA
2
1_555
C
DT
215
C
N3
DT
15
1_555
hydrog
WATSON-CRICK
B
DA
102
B
N6
DA
2
1_555
C
DT
215
C
O4
DT
15
1_555
hydrog
WATSON-CRICK
B
DC
103
B
N3
DC
3
1_555
C
DG
214
C
N1
DG
14
1_555
hydrog
WATSON-CRICK
B
DC
103
B
N4
DC
3
1_555
C
DG
214
C
O6
DG
14
1_555
hydrog
WATSON-CRICK
B
DC
103
B
O2
DC
3
1_555
C
DG
214
C
N2
DG
14
1_555
hydrog
WATSON-CRICK
B
DC
104
B
N3
DC
4
1_555
C
DG
213
C
N1
DG
13
1_555
hydrog
WATSON-CRICK
B
DC
104
B
N4
DC
4
1_555
C
DG
213
C
O6
DG
13
1_555
hydrog
WATSON-CRICK
B
DC
104
B
O2
DC
4
1_555
C
DG
213
C
N2
DG
13
1_555
hydrog
WATSON-CRICK
B
DA
105
B
N1
DA
5
1_555
C
DT
212
C
N3
DT
12
1_555
hydrog
WATSON-CRICK
B
DA
105
B
N6
DA
5
1_555
C
DT
212
C
O4
DT
12
1_555
hydrog
WATSON-CRICK
B
DC
106
B
N3
DC
6
1_555
C
DG
211
C
N1
DG
11
1_555
hydrog
WATSON-CRICK
B
DC
106
B
N4
DC
6
1_555
C
DG
211
C
O6
DG
11
1_555
hydrog
WATSON-CRICK
B
DC
106
B
O2
DC
6
1_555
C
DG
211
C
N2
DG
11
1_555
hydrog
WATSON-CRICK
B
DG
107
B
N1
DG
7
1_555
C
DC
210
C
N3
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
107
B
N2
DG
7
1_555
C
DC
210
C
O2
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
107
B
O6
DG
7
1_555
C
DC
210
C
N4
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
108
B
N1
DG
8
1_555
C
DC
209
C
N3
DC
9
1_555
hydrog
WATSON-CRICK
B
DG
108
B
N2
DG
8
1_555
C
DC
209
C
O2
DC
9
1_555
hydrog
WATSON-CRICK
B
DG
108
B
O6
DG
8
1_555
C
DC
209
C
N4
DC
9
1_555
hydrog
WATSON-CRICK
B
DC
109
B
N3
DC
9
1_555
C
DG
208
C
N1
DG
8
1_555
hydrog
WATSON-CRICK
B
DC
109
B
N4
DC
9
1_555
C
DG
208
C
O6
DG
8
1_555
hydrog
WATSON-CRICK
B
DC
109
B
O2
DC
9
1_555
C
DG
208
C
N2
DG
8
1_555
hydrog
WATSON-CRICK
B
DG
110
B
N1
DG
10
1_555
C
DC
207
C
N3
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
110
B
N2
DG
10
1_555
C
DC
207
C
O2
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
110
B
O6
DG
10
1_555
C
DC
207
C
N4
DC
7
1_555
hydrog
WATSON-CRICK
B
DC
111
B
N3
DC
11
1_555
C
DG
206
C
N1
DG
6
1_555
hydrog
WATSON-CRICK
B
DC
111
B
N4
DC
11
1_555
C
DG
206
C
O6
DG
6
1_555
hydrog
WATSON-CRICK
B
DC
111
B
O2
DC
11
1_555
C
DG
206
C
N2
DG
6
1_555
TRANSFERASE/DNA
DNA polymerase, modified nucleotides, A family, DNA synthesis, rigid linker, elongation of modified DNA, non-natural nucleotide, TRANSFERASE-DNA complex
A
TRP
299
A
TRP
7
1
A
PRO
300
A
PRO
8
1.62
A
ASP
578
A
ASP
286
1
A
PRO
579
A
PRO
287
2.48
DPO1_THEAQ
UNP
1
293
P19821
ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDD
PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD
VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI
LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS
QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF
IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL
EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE
4ELV
PDB
2
4ELV
4ELV
PDB
3
4ELV
293
832
4ELV
293
832
P19821
A
1
1
540
101
112
4ELV
101
112
4ELV
B
2
1
12
201
216
4ELV
201
216
4ELV
C
3
1
16
4
2
2
4
2
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
295
A
GLU
3
A
ALA
297
A
ALA
5
A
ARG
331
A
ARG
39
A
ARG
334
A
ARG
42
A
LEU
321
A
LEU
29
A
ARG
328
A
ARG
36
A
PHE
306
A
PHE
14
A
LEU
311
A
LEU
19
A
ARG
450
A
ARG
158
A
LEU
451
A
LEU
159
A
PHE
598
A
PHE
306
A
ILE
599
A
ILE
307
A
ARG
563
A
ARG
271
A
ASN
565
A
ASN
273
A
SER
575
A
SER
283
A
SER
577
A
SER
285
A
ARG
778
A
ARG
486
A
GLN
782
A
GLN
490
A
GLU
786
A
GLU
494
A
PRO
792
A
PRO
500
A
TRP
604
A
TRP
312
A
TYR
611
A
TYR
319
A
VAL
819
A
VAL
527
A
GLY
824
A
GLY
532
A
TYR
719
A
TYR
427
A
GLU
721
A
GLU
429
A
ARG
727
A
ARG
435
A
TYR
729
A
TYR
437
BINDING SITE FOR RESIDUE MG A 901
A
MG
901
Software
7
BINDING SITE FOR RESIDUE 0R7 A 902
A
0R7
902
Software
24
BINDING SITE FOR RESIDUE GOL A 903
A
GOL
903
Software
10
BINDING SITE FOR RESIDUE PGE A 904
A
PGE
904
Software
4
BINDING SITE FOR RESIDUE GOL A 905
A
GOL
905
Software
7
BINDING SITE FOR RESIDUE GOL A 906
A
GOL
906
Software
6
BINDING SITE FOR RESIDUE EDO A 907
A
EDO
907
Software
3
BINDING SITE FOR RESIDUE CA A 908
A
CA
908
Software
4
BINDING SITE FOR RESIDUE MG B 201
B
MG
201
Software
6
BINDING SITE FOR RESIDUE GOL C 301
C
GOL
301
Software
5
BINDING SITE FOR RESIDUE MG C 302
C
MG
302
Software
6
BINDING SITE FOR RESIDUE EDO C 303
C
EDO
303
Software
4
A
ASP
610
A
ASP
318
7
1_555
A
GLU
786
A
GLU
494
7
1_555
A
0R7
902
E
0R7
7
1_555
A
HOH
1019
P
HOH
7
1_555
A
HOH
1048
P
HOH
7
1_555
A
HOH
1129
P
HOH
7
1_555
A
HOH
1196
P
HOH
7
1_555
A
ARG
573
A
ARG
281
24
1_555
A
ASP
610
A
ASP
318
24
1_555
A
TYR
611
A
TYR
319
24
1_555
A
SER
612
A
SER
320
24
1_555
A
GLN
613
A
GLN
321
24
1_555
A
ILE
614
A
ILE
322
24
1_555
A
GLU
615
A
GLU
323
24
1_555
A
HIS
639
A
HIS
347
24
1_555
A
ARG
659
A
ARG
367
24
1_555
A
ARG
660
A
ARG
368
24
1_555
A
LYS
663
A
LYS
371
24
1_555
A
PHE
667
A
PHE
375
24
1_555
A
ASP
785
A
ASP
493
24
1_555
A
MG
901
D
MG
24
1_555
A
CA
908
K
CA
24
1_555
A
HOH
1045
P
HOH
24
1_555
A
HOH
1080
P
HOH
24
1_555
A
HOH
1196
P
HOH
24
1_555
A
HOH
1200
P
HOH
24
1_555
A
HOH
1207
P
HOH
24
1_555
A
HOH
1231
P
HOH
24
1_555
B
0R8
112
B
0R8
12
24
1_555
C
DG
204
C
DG
4
24
1_555
C
DG
205
C
DG
5
24
1_555
A
THR
544
A
THR
252
10
1_555
A
TYR
545
A
TYR
253
10
1_555
A
PRO
579
A
PRO
287
10
1_555
A
ASN
580
A
ASN
288
10
1_555
A
ASN
583
A
ASN
291
10
1_555
A
HOH
1090
P
HOH
10
1_555
A
HOH
1155
P
HOH
10
1_555
C
DC
209
C
DC
9
10
1_555
C
DC
210
C
DC
10
10
1_555
C
HOH
405
R
HOH
10
1_555
A
ASP
371
A
ASP
79
4
1_555
A
TRP
417
A
TRP
125
4
1_555
A
ARG
431
A
ARG
139
4
1_555
A
ARG
435
A
ARG
143
4
1_555
A
ARG
425
A
ARG
133
7
1_555
A
LEU
723
A
LEU
431
7
1_555
A
PHE
724
A
PHE
432
7
1_555
A
GLU
774
A
GLU
482
7
6_554
A
TYR
811
A
TYR
519
7
1_555
A
HOH
1160
P
HOH
7
1_555
A
HOH
1239
P
HOH
7
1_555
A
ASP
452
A
ASP
160
6
1_555
A
TYR
455
A
TYR
163
6
5_554
A
ARG
593
A
ARG
301
6
5_554
A
ARG
596
A
ARG
304
6
1_555
A
ILE
599
A
ILE
307
6
1_555
A
HOH
1110
P
HOH
6
5_554
A
LEU
311
A
LEU
19
3
1_555
A
GLU
400
A
GLU
108
3
1_555
A
ARG
405
A
ARG
113
3
1_555
A
ASP
610
A
ASP
318
4
1_555
A
TYR
611
A
TYR
319
4
1_555
A
ASP
785
A
ASP
493
4
1_555
A
0R7
902
E
0R7
4
1_555
B
HOH
335
Q
HOH
6
1_555
B
HOH
336
Q
HOH
6
1_555
B
HOH
337
Q
HOH
6
1_555
B
HOH
338
Q
HOH
6
1_555
C
HOH
437
R
HOH
6
1_555
C
HOH
444
R
HOH
6
1_555
C
DG
205
C
DG
5
5
1_555
C
DG
206
C
DG
6
5
1_555
C
HOH
404
R
HOH
5
1_555
C
HOH
426
R
HOH
5
1_555
C
HOH
429
R
HOH
5
1_555
C
DG
214
C
DG
14
6
1_555
C
HOH
439
R
HOH
6
1_555
C
HOH
440
R
HOH
6
1_555
C
HOH
441
R
HOH
6
1_555
C
HOH
442
R
HOH
6
1_555
C
HOH
443
R
HOH
6
1_555
A
ALA
570
A
ALA
278
4
1_555
A
ARG
728
A
ARG
436
4
1_555
C
DG
206
C
DG
6
4
1_555
C
DC
207
C
DC
7
4
1_555
152
P 31 2 1