0.009366
0.000000
0.000000
0.000000
0.009366
0.000000
0.000000
0.000000
0.009366
0.00000
0.00000
0.00000
Kim, M.-S.
Shin, D.-H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
106.768
106.768
106.768
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Acta Crystallogr.,Sect.D
ABCRE6
1399-0047
69
669
680
10.1107/S0907444913001194
23519676
Structure of Nm23-H1 under oxidative conditions.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-04-02
ADSC QUANTUM 4
double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
4A
PAL/PLS
1
SYNCHROTRON
PAL/PLS BEAMLINE 4A
17170.721
Nucleoside diphosphate kinase A
2.7.4.6
2
man
polymer
94.971
PHOSPHATE ION
2
syn
non-polymer
18.015
water
55
nat
water
NDK A, NDP kinase A, Granzyme A-activated DNase, GAAD, Metastasis inhibition factor nm23, Tumor metastatic process-associated protein, nm23-H1
no
no
MANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEG
LNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE
MANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEG
LNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
NME1, NDPKA, NM23
9606
Homo sapiens
562
Escherichia coli
1
2.95
58.35
VAPOR DIFFUSION, HANGING DROP
6.4
2.0M sodium potassium phosphate pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 296K
296
citation
citation_author
repository
Initial release
Database references
1
0
2013-03-27
1
1
2019-12-25
_citation.country
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.pdbx_database_id_PubMed
_citation.title
_citation_author.name
RCSB
Y
PDBJ
2012-04-13
REL
REL
PO4
PHOSPHATE ION
HOH
water
PO4
161
2
PO4
PO4
201
A
PO4
161
2
PO4
PO4
201
B
HOH
1
3
HOH
HOH
301
A
HOH
2
3
HOH
HOH
302
A
HOH
6
3
HOH
HOH
303
A
HOH
9
3
HOH
HOH
304
A
HOH
10
3
HOH
HOH
305
A
HOH
12
3
HOH
HOH
306
A
HOH
14
3
HOH
HOH
307
A
HOH
16
3
HOH
HOH
308
A
HOH
17
3
HOH
HOH
309
A
HOH
19
3
HOH
HOH
310
A
HOH
21
3
HOH
HOH
311
A
HOH
22
3
HOH
HOH
312
A
HOH
25
3
HOH
HOH
313
A
HOH
29
3
HOH
HOH
314
A
HOH
33
3
HOH
HOH
315
A
HOH
36
3
HOH
HOH
316
A
HOH
41
3
HOH
HOH
317
A
HOH
45
3
HOH
HOH
318
A
HOH
48
3
HOH
HOH
319
A
HOH
49
3
HOH
HOH
320
A
HOH
50
3
HOH
HOH
321
A
HOH
51
3
HOH
HOH
322
A
HOH
53
3
HOH
HOH
323
A
HOH
54
3
HOH
HOH
324
A
HOH
55
3
HOH
HOH
325
A
HOH
3
3
HOH
HOH
301
B
HOH
4
3
HOH
HOH
302
B
HOH
5
3
HOH
HOH
303
B
HOH
7
3
HOH
HOH
304
B
HOH
8
3
HOH
HOH
305
B
HOH
11
3
HOH
HOH
306
B
HOH
13
3
HOH
HOH
307
B
HOH
15
3
HOH
HOH
308
B
HOH
18
3
HOH
HOH
309
B
HOH
20
3
HOH
HOH
310
B
HOH
23
3
HOH
HOH
311
B
HOH
24
3
HOH
HOH
312
B
HOH
26
3
HOH
HOH
313
B
HOH
27
3
HOH
HOH
314
B
HOH
28
3
HOH
HOH
315
B
HOH
30
3
HOH
HOH
316
B
HOH
31
3
HOH
HOH
317
B
HOH
32
3
HOH
HOH
318
B
HOH
34
3
HOH
HOH
319
B
HOH
35
3
HOH
HOH
320
B
HOH
37
3
HOH
HOH
321
B
HOH
38
3
HOH
HOH
322
B
HOH
39
3
HOH
HOH
323
B
HOH
40
3
HOH
HOH
324
B
HOH
42
3
HOH
HOH
325
B
HOH
43
3
HOH
HOH
326
B
HOH
44
3
HOH
HOH
327
B
HOH
46
3
HOH
HOH
328
B
HOH
47
3
HOH
HOH
329
B
HOH
52
3
HOH
HOH
330
B
MET
1
n
1
MET
1
A
ALA
2
n
2
ALA
2
A
ASN
3
n
3
ASN
3
A
CYS
4
n
4
CYS
4
A
GLU
5
n
5
GLU
5
A
ARG
6
n
6
ARG
6
A
THR
7
n
7
THR
7
A
PHE
8
n
8
PHE
8
A
ILE
9
n
9
ILE
9
A
ALA
10
n
10
ALA
10
A
ILE
11
n
11
ILE
11
A
LYS
12
n
12
LYS
12
A
PRO
13
n
13
PRO
13
A
ASP
14
n
14
ASP
14
A
GLY
15
n
15
GLY
15
A
VAL
16
n
16
VAL
16
A
GLN
17
n
17
GLN
17
A
ARG
18
n
18
ARG
18
A
GLY
19
n
19
GLY
19
A
LEU
20
n
20
LEU
20
A
VAL
21
n
21
VAL
21
A
GLY
22
n
22
GLY
22
A
GLU
23
n
23
GLU
23
A
ILE
24
n
24
ILE
24
A
ILE
25
n
25
ILE
25
A
LYS
26
n
26
LYS
26
A
ARG
27
n
27
ARG
27
A
PHE
28
n
28
PHE
28
A
GLU
29
n
29
GLU
29
A
GLN
30
n
30
GLN
30
A
LYS
31
n
31
LYS
31
A
GLY
32
n
32
GLY
32
A
PHE
33
n
33
PHE
33
A
ARG
34
n
34
ARG
34
A
LEU
35
n
35
LEU
35
A
VAL
36
n
36
VAL
36
A
GLY
37
n
37
GLY
37
A
LEU
38
n
38
LEU
38
A
LYS
39
n
39
LYS
39
A
PHE
40
n
40
PHE
40
A
MET
41
n
41
MET
41
A
GLN
42
n
42
GLN
42
A
ALA
43
n
43
ALA
43
A
SER
44
n
44
SER
44
A
GLU
45
n
45
GLU
45
A
ASP
46
n
46
ASP
46
A
LEU
47
n
47
LEU
47
A
LEU
48
n
48
LEU
48
A
LYS
49
n
49
LYS
49
A
GLU
50
n
50
GLU
50
A
HIS
51
n
51
HIS
51
A
TYR
52
n
52
TYR
52
A
VAL
53
n
53
VAL
53
A
ASP
54
n
54
ASP
54
A
LEU
55
n
55
LEU
55
A
LYS
56
n
56
LYS
56
A
ASP
57
n
57
ASP
57
A
ARG
58
n
58
ARG
58
A
PRO
59
n
59
PRO
59
A
PHE
60
n
60
PHE
60
A
PHE
61
n
61
PHE
61
A
ALA
62
n
62
ALA
62
A
GLY
63
n
63
GLY
63
A
LEU
64
n
64
LEU
64
A
VAL
65
n
65
VAL
65
A
LYS
66
n
66
LYS
66
A
TYR
67
n
67
TYR
67
A
MET
68
n
68
MET
68
A
HIS
69
n
69
HIS
69
A
SER
70
n
70
SER
70
A
GLY
71
n
71
GLY
71
A
PRO
72
n
72
PRO
72
A
VAL
73
n
73
VAL
73
A
VAL
74
n
74
VAL
74
A
ALA
75
n
75
ALA
75
A
MET
76
n
76
MET
76
A
VAL
77
n
77
VAL
77
A
TRP
78
n
78
TRP
78
A
GLU
79
n
79
GLU
79
A
GLY
80
n
80
GLY
80
A
LEU
81
n
81
LEU
81
A
ASN
82
n
82
ASN
82
A
VAL
83
n
83
VAL
83
A
VAL
84
n
84
VAL
84
A
LYS
85
n
85
LYS
85
A
THR
86
n
86
THR
86
A
GLY
87
n
87
GLY
87
A
ARG
88
n
88
ARG
88
A
VAL
89
n
89
VAL
89
A
MET
90
n
90
MET
90
A
LEU
91
n
91
LEU
91
A
GLY
92
n
92
GLY
92
A
GLU
93
n
93
GLU
93
A
THR
94
n
94
THR
94
A
ASN
95
n
95
ASN
95
A
PRO
96
n
96
PRO
96
A
ALA
97
n
97
ALA
97
A
ASP
98
n
98
ASP
98
A
SER
99
n
99
SER
99
A
LYS
100
n
100
LYS
100
A
PRO
101
n
101
PRO
101
A
GLY
102
n
102
GLY
102
A
THR
103
n
103
THR
103
A
ILE
104
n
104
ILE
104
A
ARG
105
n
105
ARG
105
A
GLY
106
n
106
GLY
106
A
ASP
107
n
107
ASP
107
A
PHE
108
n
108
PHE
108
A
CYS
109
n
109
CYS
109
A
ILE
110
n
110
ILE
110
A
GLN
111
n
111
GLN
111
A
VAL
112
n
112
VAL
112
A
GLY
113
n
113
GLY
113
A
ARG
114
n
114
ARG
114
A
ASN
115
n
115
ASN
115
A
ILE
116
n
116
ILE
116
A
ILE
117
n
117
ILE
117
A
HIS
118
n
118
HIS
118
A
GLY
119
n
119
GLY
119
A
SER
120
n
120
SER
120
A
ASP
121
n
121
ASP
121
A
SER
122
n
122
SER
122
A
VAL
123
n
123
VAL
123
A
GLU
124
n
124
GLU
124
A
SER
125
n
125
SER
125
A
ALA
126
n
126
ALA
126
A
GLU
127
n
127
GLU
127
A
LYS
128
n
128
LYS
128
A
GLU
129
n
129
GLU
129
A
ILE
130
n
130
ILE
130
A
GLY
131
n
131
GLY
131
A
LEU
132
n
132
LEU
132
A
TRP
133
n
133
TRP
133
A
PHE
134
n
134
PHE
134
A
HIS
135
n
135
HIS
135
A
PRO
136
n
136
PRO
136
A
GLU
137
n
137
GLU
137
A
GLU
138
n
138
GLU
138
A
LEU
139
n
139
LEU
139
A
VAL
140
n
140
VAL
140
A
ASP
141
n
141
ASP
141
A
TYR
142
n
142
TYR
142
A
THR
143
n
143
THR
143
A
SER
144
n
144
SER
144
A
CYS
145
n
145
CYS
145
A
ALA
146
n
146
ALA
146
A
GLN
147
n
147
GLN
147
A
ASN
148
n
148
ASN
148
A
TRP
149
n
149
TRP
149
A
ILE
150
n
150
ILE
150
A
TYR
151
n
151
TYR
151
A
n
152
152
A
MET
1
n
1
MET
1
B
ALA
2
n
2
ALA
2
B
ASN
3
n
3
ASN
3
B
CYS
4
n
4
CYS
4
B
GLU
5
n
5
GLU
5
B
ARG
6
n
6
ARG
6
B
THR
7
n
7
THR
7
B
PHE
8
n
8
PHE
8
B
ILE
9
n
9
ILE
9
B
ALA
10
n
10
ALA
10
B
ILE
11
n
11
ILE
11
B
LYS
12
n
12
LYS
12
B
PRO
13
n
13
PRO
13
B
ASP
14
n
14
ASP
14
B
GLY
15
n
15
GLY
15
B
VAL
16
n
16
VAL
16
B
GLN
17
n
17
GLN
17
B
ARG
18
n
18
ARG
18
B
GLY
19
n
19
GLY
19
B
LEU
20
n
20
LEU
20
B
VAL
21
n
21
VAL
21
B
GLY
22
n
22
GLY
22
B
GLU
23
n
23
GLU
23
B
ILE
24
n
24
ILE
24
B
ILE
25
n
25
ILE
25
B
LYS
26
n
26
LYS
26
B
ARG
27
n
27
ARG
27
B
PHE
28
n
28
PHE
28
B
GLU
29
n
29
GLU
29
B
GLN
30
n
30
GLN
30
B
LYS
31
n
31
LYS
31
B
GLY
32
n
32
GLY
32
B
PHE
33
n
33
PHE
33
B
ARG
34
n
34
ARG
34
B
LEU
35
n
35
LEU
35
B
VAL
36
n
36
VAL
36
B
GLY
37
n
37
GLY
37
B
LEU
38
n
38
LEU
38
B
LYS
39
n
39
LYS
39
B
PHE
40
n
40
PHE
40
B
MET
41
n
41
MET
41
B
GLN
42
n
42
GLN
42
B
ALA
43
n
43
ALA
43
B
SER
44
n
44
SER
44
B
GLU
45
n
45
GLU
45
B
ASP
46
n
46
ASP
46
B
LEU
47
n
47
LEU
47
B
LEU
48
n
48
LEU
48
B
LYS
49
n
49
LYS
49
B
GLU
50
n
50
GLU
50
B
HIS
51
n
51
HIS
51
B
TYR
52
n
52
TYR
52
B
VAL
53
n
53
VAL
53
B
ASP
54
n
54
ASP
54
B
LEU
55
n
55
LEU
55
B
LYS
56
n
56
LYS
56
B
ASP
57
n
57
ASP
57
B
ARG
58
n
58
ARG
58
B
PRO
59
n
59
PRO
59
B
PHE
60
n
60
PHE
60
B
PHE
61
n
61
PHE
61
B
ALA
62
n
62
ALA
62
B
GLY
63
n
63
GLY
63
B
LEU
64
n
64
LEU
64
B
VAL
65
n
65
VAL
65
B
LYS
66
n
66
LYS
66
B
TYR
67
n
67
TYR
67
B
MET
68
n
68
MET
68
B
HIS
69
n
69
HIS
69
B
SER
70
n
70
SER
70
B
GLY
71
n
71
GLY
71
B
PRO
72
n
72
PRO
72
B
VAL
73
n
73
VAL
73
B
VAL
74
n
74
VAL
74
B
ALA
75
n
75
ALA
75
B
MET
76
n
76
MET
76
B
VAL
77
n
77
VAL
77
B
TRP
78
n
78
TRP
78
B
GLU
79
n
79
GLU
79
B
GLY
80
n
80
GLY
80
B
LEU
81
n
81
LEU
81
B
ASN
82
n
82
ASN
82
B
VAL
83
n
83
VAL
83
B
VAL
84
n
84
VAL
84
B
LYS
85
n
85
LYS
85
B
THR
86
n
86
THR
86
B
GLY
87
n
87
GLY
87
B
ARG
88
n
88
ARG
88
B
VAL
89
n
89
VAL
89
B
MET
90
n
90
MET
90
B
LEU
91
n
91
LEU
91
B
GLY
92
n
92
GLY
92
B
GLU
93
n
93
GLU
93
B
THR
94
n
94
THR
94
B
ASN
95
n
95
ASN
95
B
PRO
96
n
96
PRO
96
B
ALA
97
n
97
ALA
97
B
ASP
98
n
98
ASP
98
B
SER
99
n
99
SER
99
B
LYS
100
n
100
LYS
100
B
PRO
101
n
101
PRO
101
B
GLY
102
n
102
GLY
102
B
THR
103
n
103
THR
103
B
ILE
104
n
104
ILE
104
B
ARG
105
n
105
ARG
105
B
GLY
106
n
106
GLY
106
B
ASP
107
n
107
ASP
107
B
PHE
108
n
108
PHE
108
B
CYS
109
n
109
CYS
109
B
ILE
110
n
110
ILE
110
B
GLN
111
n
111
GLN
111
B
VAL
112
n
112
VAL
112
B
GLY
113
n
113
GLY
113
B
ARG
114
n
114
ARG
114
B
ASN
115
n
115
ASN
115
B
ILE
116
n
116
ILE
116
B
ILE
117
n
117
ILE
117
B
HIS
118
n
118
HIS
118
B
GLY
119
n
119
GLY
119
B
SER
120
n
120
SER
120
B
ASP
121
n
121
ASP
121
B
SER
122
n
122
SER
122
B
VAL
123
n
123
VAL
123
B
GLU
124
n
124
GLU
124
B
SER
125
n
125
SER
125
B
ALA
126
n
126
ALA
126
B
GLU
127
n
127
GLU
127
B
LYS
128
n
128
LYS
128
B
GLU
129
n
129
GLU
129
B
ILE
130
n
130
ILE
130
B
GLY
131
n
131
GLY
131
B
LEU
132
n
132
LEU
132
B
TRP
133
n
133
TRP
133
B
PHE
134
n
134
PHE
134
B
HIS
135
n
135
HIS
135
B
PRO
136
n
136
PRO
136
B
GLU
137
n
137
GLU
137
B
GLU
138
n
138
GLU
138
B
LEU
139
n
139
LEU
139
B
VAL
140
n
140
VAL
140
B
ASP
141
n
141
ASP
141
B
TYR
142
n
142
TYR
142
B
THR
143
n
143
THR
143
B
SER
144
n
144
SER
144
B
CYS
145
n
145
CYS
145
B
ALA
146
n
146
ALA
146
B
GLN
147
n
147
GLN
147
B
ASN
148
n
148
ASN
148
B
TRP
149
n
149
TRP
149
B
n
150
150
B
n
151
151
B
n
152
152
B
author_and_software_defined_assembly
PISA
6
hexameric
11860
-96
38420
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
6_456
z-1/2,-x+1/2,-y+1
crystal symmetry operation
-53.3840000000
53.3840000000
106.7680000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
12_565
-y+1/2,-z+1,x+1/2
crystal symmetry operation
53.3840000000
106.7680000000
53.3840000000
A
N
LYS
39
A
N
LYS
39
A
O
ALA
75
A
O
ALA
75
A
O
MET
76
A
O
MET
76
A
N
ILE
9
A
N
ILE
9
A
N
ALA
10
A
N
ALA
10
A
O
HIS
118
A
O
HIS
118
B
N
ARG
34
B
N
ARG
34
B
O
GLU
79
B
O
GLU
79
B
O
TRP
78
B
O
TRP
78
B
N
THR
7
B
N
THR
7
B
N
ALA
10
B
N
ALA
10
B
O
HIS
118
B
O
HIS
118
1
A
GLU
152
A
GLU
152
1
Y
1
B
ILE
150
B
ILE
150
1
Y
1
B
TYR
151
B
TYR
151
1
Y
1
B
GLU
152
B
GLU
152
1
Y
1
B
B
O
O
TRP
HOH
149
329
2.13
1
A
A
N
O
ASP
HOH
141
308
2.14
1
A
ASN
3
-74.78
20.70
1
A
TYR
52
-94.60
32.70
1
A
ARG
58
-44.64
152.33
1
A
TYR
142
-171.74
11.84
1
A
SER
144
38.02
59.08
1
B
PRO
96
-65.68
34.75
1
B
ASN
115
-123.17
-168.73
1
B
TYR
142
-152.33
-7.65
protein_rep.param
protein.top
dna-rna_rep.param
dna-rna.top
water_rep.param
water.top
ion.param
ion.top
carbohydrate.param
carbohydrate.top
36.7
0.00
0.00
0.00
0.00
0.00
0.00
BULK SOLVENT MODEL USED
0.2559
0.1823
0.1895
2.800
47.748
1020
10255
9.95
99.89
0.36
1
RESTRAINED
1.36
MOLECULAR REPLACEMENT
24.94
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
0.42
0.32
5.00
0.46
0.37
2.800
47.748
55
2437
10
0
2372
0.009
2435
1.315
3281
17.047
899
0.097
349
0.005
423
0.3490
0.2450
2.9476
158
1304
100.00
0.2711
0.2023
3.1322
146
1287
100.00
0.2936
0.2020
3.3740
141
1299
100.00
0.2545
0.1777
3.7135
138
1316
100.00
0.2551
0.1594
4.2505
151
1307
100.00
0.2015
0.1547
5.3541
133
1353
100.00
0.2372
0.1886
47.7550
153
1369
99.00
43.6
2.80
47.755
4ENO
10277
10255
0
-3
1
99.9
2.80
1
99.9
data collection
ADSC
Quantum
phasing
EPMR
refinement
CNS
1.3
data reduction
HKL-2000
data scaling
SCALEPACK
refinement
PHENIX
1.8.1_1168
Nucleoside diphosphate kinase A (E.C.2.7.4.6)
Crystal structure of oxidized human nm23-H1
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
MET
1
A
MET
1
HELX_P
A
CYS
4
A
CYS
4
5
1
4
A
LYS
12
A
LYS
12
HELX_P
A
ARG
18
A
ARG
18
1
2
7
A
LEU
20
A
LEU
20
HELX_P
A
GLY
32
A
GLY
32
1
3
13
A
SER
44
A
SER
44
HELX_P
A
TYR
52
A
TYR
52
1
4
9
A
VAL
53
A
VAL
53
HELX_P
A
LYS
56
A
LYS
56
5
5
4
A
PHE
60
A
PHE
60
HELX_P
A
SER
70
A
SER
70
1
6
11
A
ASN
82
A
ASN
82
HELX_P
A
GLY
92
A
GLY
92
1
7
11
A
THR
103
A
THR
103
HELX_P
A
CYS
109
A
CYS
109
1
8
7
A
SER
122
A
SER
122
HELX_P
A
PHE
134
A
PHE
134
1
9
13
A
HIS
135
A
HIS
135
HELX_P
A
LEU
139
A
LEU
139
5
10
5
B
MET
1
B
MET
1
HELX_P
B
CYS
4
B
CYS
4
5
11
4
B
LYS
12
B
LYS
12
HELX_P
B
ARG
18
B
ARG
18
1
12
7
B
LEU
20
B
LEU
20
HELX_P
B
GLY
32
B
GLY
32
1
13
13
B
SER
44
B
SER
44
HELX_P
B
TYR
52
B
TYR
52
1
14
9
B
VAL
53
B
VAL
53
HELX_P
B
LYS
56
B
LYS
56
5
15
4
B
PHE
60
B
PHE
60
HELX_P
B
SER
70
B
SER
70
1
16
11
B
ASN
82
B
ASN
82
HELX_P
B
GLY
92
B
GLY
92
1
17
11
B
THR
103
B
THR
103
HELX_P
B
CYS
109
B
CYS
109
1
18
7
B
SER
122
B
SER
122
HELX_P
B
PHE
134
B
PHE
134
1
19
13
disulf
2.038
A
CYS
4
A
SG
CYS
4
1_555
A
CYS
145
A
SG
CYS
145
1_555
disulf
2.039
B
CYS
4
B
SG
CYS
4
1_555
B
CYS
145
B
SG
CYS
145
1_555
TRANSFERASE
Ferredoxin-like/Alpha, beta proteins, nucleoside diphosphate kinase, TRANSFERASE
NDKA_HUMAN
UNP
1
1
P15531
MANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEG
LNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE
1
152
4ENO
1
152
P15531
A
1
1
152
1
152
4ENO
1
152
P15531
B
1
1
152
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
34
A
ARG
34
A
MET
41
A
MET
41
A
VAL
73
A
VAL
73
A
GLU
79
A
GLU
79
A
ARG
6
A
ARG
6
A
ILE
11
A
ILE
11
A
ILE
117
A
ILE
117
A
GLY
119
A
GLY
119
B
ARG
34
B
ARG
34
B
MET
41
B
MET
41
B
VAL
73
B
VAL
73
B
GLU
79
B
GLU
79
B
ARG
6
B
ARG
6
B
ILE
11
B
ILE
11
B
ILE
117
B
ILE
117
B
GLY
119
B
GLY
119
BINDING SITE FOR RESIDUE PO4 A 201
Software
3
BINDING SITE FOR RESIDUE PO4 B 201
Software
4
A
LYS
12
A
LYS
12
3
1_555
A
TYR
52
A
TYR
52
3
1_555
A
HIS
118
A
HIS
118
3
1_555
B
LYS
12
B
LYS
12
4
1_555
B
TYR
52
B
TYR
52
4
1_555
B
HIS
118
B
HIS
118
4
1_555
B
HOH
304
F
HOH
4
1_555
198
P 21 3