0.007572
0.000000
0.000000
0.000000
0.007572
0.000000
0.000000
0.000000
0.023563
0.00000
0.00000
0.00000
Schnell, R.
Schneider, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
132.070
132.070
42.440
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
R
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
N
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
DK
Acta Crystallogr.,Sect.F
1744-3091
69
25
34
10.1107/S1744309112044739
23295481
The AEROPATH project targeting Pseudomonas aeruginosa: crystallographic studies for assessment of potential targets in early-stage drug discovery.
2013
10.2210/pdb4es6/pdb
pdb_00004es6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
mirrors
CCD
2009-10-25
ADSC QUANTUM 315r
SI (311) MONOCHROMATOR
SINGLE WAVELENGTH
M
x-ray
1
0.979400
1.0
ID23-1
ESRF
0.979400
SYNCHROTRON
ESRF BEAMLINE ID23-1
27588.447
Uroporphyrinogen-III synthase
4.2.1.75
1
man
polymer
35.453
CHLORIDE ION
2
syn
non-polymer
18.015
water
98
nat
water
UROS, Hydroxymethylbilane hydrolyase [cyclizing], Uroporphyrinogen-III cosynthase
no
no
GSHMSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRY
WPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVD
YLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRG
ASAPALLAALTSAA
GSHMSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRY
WPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVD
YLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRG
ASAPALLAALTSAA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
PAO1
sample
hemD, PA5259
208964
Pseudomonas aeruginosa
469008
Escherichia coli
BL21(DE3)
PLASMID
pET28a
1
3.35
63.33
VAPOR DIFFUSION, HANGING DROP
6.7
0.1M Na-Cacodylate pH 6.7, 0.87M Na-Citrate , VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2013-01-09
1
1
2013-01-23
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-04-22
REL
REL
CL
CHLORIDE ION
HOH
water
CL
1
2
CL
CL
301
A
CL
8
2
CL
CL
302
A
HOH
10
3
HOH
HOH
401
A
HOH
11
3
HOH
HOH
402
A
HOH
14
3
HOH
HOH
403
A
HOH
16
3
HOH
HOH
404
A
HOH
19
3
HOH
HOH
405
A
HOH
21
3
HOH
HOH
406
A
HOH
23
3
HOH
HOH
407
A
HOH
25
3
HOH
HOH
408
A
HOH
26
3
HOH
HOH
409
A
HOH
29
3
HOH
HOH
410
A
HOH
30
3
HOH
HOH
411
A
HOH
31
3
HOH
HOH
412
A
HOH
32
3
HOH
HOH
413
A
HOH
35
3
HOH
HOH
414
A
HOH
36
3
HOH
HOH
415
A
HOH
37
3
HOH
HOH
416
A
HOH
38
3
HOH
HOH
417
A
HOH
39
3
HOH
HOH
418
A
HOH
40
3
HOH
HOH
419
A
HOH
41
3
HOH
HOH
420
A
HOH
42
3
HOH
HOH
421
A
HOH
44
3
HOH
HOH
422
A
HOH
46
3
HOH
HOH
423
A
HOH
47
3
HOH
HOH
424
A
HOH
50
3
HOH
HOH
425
A
HOH
51
3
HOH
HOH
426
A
HOH
52
3
HOH
HOH
427
A
HOH
53
3
HOH
HOH
428
A
HOH
54
3
HOH
HOH
429
A
HOH
55
3
HOH
HOH
430
A
HOH
56
3
HOH
HOH
431
A
HOH
57
3
HOH
HOH
432
A
HOH
58
3
HOH
HOH
433
A
HOH
59
3
HOH
HOH
434
A
HOH
60
3
HOH
HOH
435
A
HOH
62
3
HOH
HOH
436
A
HOH
63
3
HOH
HOH
437
A
HOH
64
3
HOH
HOH
438
A
HOH
65
3
HOH
HOH
439
A
HOH
66
3
HOH
HOH
440
A
HOH
67
3
HOH
HOH
441
A
HOH
68
3
HOH
HOH
442
A
HOH
69
3
HOH
HOH
443
A
HOH
70
3
HOH
HOH
444
A
HOH
71
3
HOH
HOH
445
A
HOH
72
3
HOH
HOH
446
A
HOH
73
3
HOH
HOH
447
A
HOH
74
3
HOH
HOH
448
A
HOH
75
3
HOH
HOH
449
A
HOH
76
3
HOH
HOH
450
A
HOH
77
3
HOH
HOH
451
A
HOH
78
3
HOH
HOH
452
A
HOH
79
3
HOH
HOH
453
A
HOH
80
3
HOH
HOH
454
A
HOH
81
3
HOH
HOH
455
A
HOH
82
3
HOH
HOH
456
A
HOH
83
3
HOH
HOH
457
A
HOH
84
3
HOH
HOH
458
A
HOH
85
3
HOH
HOH
459
A
HOH
86
3
HOH
HOH
460
A
HOH
87
3
HOH
HOH
461
A
HOH
88
3
HOH
HOH
462
A
HOH
89
3
HOH
HOH
463
A
HOH
90
3
HOH
HOH
464
A
HOH
91
3
HOH
HOH
465
A
HOH
92
3
HOH
HOH
466
A
HOH
93
3
HOH
HOH
467
A
HOH
94
3
HOH
HOH
468
A
HOH
95
3
HOH
HOH
469
A
HOH
96
3
HOH
HOH
470
A
HOH
97
3
HOH
HOH
471
A
HOH
98
3
HOH
HOH
472
A
HOH
99
3
HOH
HOH
473
A
HOH
100
3
HOH
HOH
474
A
HOH
101
3
HOH
HOH
475
A
HOH
102
3
HOH
HOH
476
A
HOH
104
3
HOH
HOH
477
A
HOH
105
3
HOH
HOH
478
A
HOH
106
3
HOH
HOH
479
A
HOH
107
3
HOH
HOH
480
A
HOH
109
3
HOH
HOH
481
A
HOH
110
3
HOH
HOH
482
A
HOH
111
3
HOH
HOH
483
A
HOH
112
3
HOH
HOH
484
A
HOH
113
3
HOH
HOH
485
A
HOH
116
3
HOH
HOH
486
A
HOH
117
3
HOH
HOH
487
A
HOH
118
3
HOH
HOH
488
A
HOH
119
3
HOH
HOH
489
A
HOH
120
3
HOH
HOH
490
A
HOH
121
3
HOH
HOH
491
A
HOH
122
3
HOH
HOH
492
A
HOH
123
3
HOH
HOH
493
A
HOH
126
3
HOH
HOH
494
A
HOH
127
3
HOH
HOH
495
A
HOH
133
3
HOH
HOH
496
A
HOH
134
3
HOH
HOH
497
A
HOH
135
3
HOH
HOH
498
A
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
GLY
3
n
6
GLY
3
A
TRP
4
n
7
TRP
4
A
ARG
5
n
8
ARG
5
A
LEU
6
n
9
LEU
6
A
LEU
7
n
10
LEU
7
A
LEU
8
n
11
LEU
8
A
THR
9
n
12
THR
9
A
ARG
10
n
13
ARG
10
A
PRO
11
n
14
PRO
11
A
ASP
12
n
15
ASP
12
A
GLU
13
n
16
GLU
13
A
GLU
14
n
17
GLU
14
A
CYS
15
n
18
CYS
15
A
ALA
16
n
19
ALA
16
A
ALA
17
n
20
ALA
17
A
LEU
18
n
21
LEU
18
A
ALA
19
n
22
ALA
19
A
ALA
20
n
23
ALA
20
A
SER
21
n
24
SER
21
A
LEU
22
n
25
LEU
22
A
GLY
23
n
26
GLY
23
A
GLU
24
n
27
GLU
24
A
ALA
25
n
28
ALA
25
A
GLY
26
n
29
GLY
26
A
VAL
27
n
30
VAL
27
A
HIS
28
n
31
HIS
28
A
SER
29
n
32
SER
29
A
SER
30
n
33
SER
30
A
SER
31
n
34
SER
31
A
LEU
32
n
35
LEU
32
A
PRO
33
n
36
PRO
33
A
LEU
34
n
37
LEU
34
A
LEU
35
n
38
LEU
35
A
ALA
36
n
39
ALA
36
A
ILE
37
n
40
ILE
37
A
ASP
38
n
41
ASP
38
A
PRO
39
n
42
PRO
39
A
LEU
40
n
43
LEU
40
A
GLU
41
n
44
GLU
41
A
GLU
42
n
45
GLU
42
A
THR
43
n
46
THR
43
A
PRO
44
n
47
PRO
44
A
GLU
45
n
48
GLU
45
A
GLN
46
n
49
GLN
46
A
ARG
47
n
50
ARG
47
A
THR
48
n
51
THR
48
A
LEU
49
n
52
LEU
49
A
MET
50
n
53
MET
50
A
LEU
51
n
54
LEU
51
A
ASP
52
n
55
ASP
52
A
LEU
53
n
56
LEU
53
A
ASP
54
n
57
ASP
54
A
ARG
55
n
58
ARG
55
A
TYR
56
n
59
TYR
56
A
CYS
57
n
60
CYS
57
A
ALA
58
n
61
ALA
58
A
VAL
59
n
62
VAL
59
A
VAL
60
n
63
VAL
60
A
VAL
61
n
64
VAL
61
A
VAL
62
n
65
VAL
62
A
SER
63
n
66
SER
63
A
LYS
64
n
67
LYS
64
A
PRO
65
n
68
PRO
65
A
ALA
66
n
69
ALA
66
A
ALA
67
n
70
ALA
67
A
ARG
68
n
71
ARG
68
A
LEU
69
n
72
LEU
69
A
GLY
70
n
73
GLY
70
A
LEU
71
n
74
LEU
71
A
GLU
72
n
75
GLU
72
A
ARG
73
n
76
ARG
73
A
LEU
74
n
77
LEU
74
A
ASP
75
n
78
ASP
75
A
ARG
76
n
79
ARG
76
A
TYR
77
n
80
TYR
77
A
TRP
78
n
81
TRP
78
A
PRO
79
n
82
PRO
79
A
GLN
80
n
83
GLN
80
A
PRO
81
n
84
PRO
81
A
PRO
82
n
85
PRO
82
A
GLN
83
n
86
GLN
83
A
GLN
84
n
87
GLN
84
A
THR
85
n
88
THR
85
A
TRP
86
n
89
TRP
86
A
CYS
87
n
90
CYS
87
A
SER
88
n
91
SER
88
A
VAL
89
n
92
VAL
89
A
GLY
90
n
93
GLY
90
A
ALA
91
n
94
ALA
91
A
ALA
92
n
95
ALA
92
A
THR
93
n
96
THR
93
A
ALA
94
n
97
ALA
94
A
ALA
95
n
98
ALA
95
A
ILE
96
n
99
ILE
96
A
LEU
97
n
100
LEU
97
A
GLU
98
n
101
GLU
98
A
ALA
99
n
102
ALA
99
A
TYR
100
n
103
TYR
100
A
GLY
101
n
104
GLY
101
A
LEU
102
n
105
LEU
102
A
ASP
103
n
106
ASP
103
A
VAL
104
n
107
VAL
104
A
THR
105
n
108
THR
105
A
TYR
106
n
109
TYR
106
A
PRO
107
n
110
PRO
107
A
GLU
108
n
111
GLU
108
A
GLN
109
n
112
GLN
109
A
GLY
110
n
113
GLY
110
A
ASP
111
n
114
ASP
111
A
ASP
112
n
115
ASP
112
A
SER
113
n
116
SER
113
A
GLU
114
n
117
GLU
114
A
ALA
115
n
118
ALA
115
A
LEU
116
n
119
LEU
116
A
LEU
117
n
120
LEU
117
A
ALA
118
n
121
ALA
118
A
LEU
119
n
122
LEU
119
A
PRO
120
n
123
PRO
120
A
ALA
121
n
124
ALA
121
A
PHE
122
n
125
PHE
122
A
GLN
123
n
126
GLN
123
A
ASP
124
n
127
ASP
124
A
SER
125
n
128
SER
125
A
LEU
126
n
129
LEU
126
A
ARG
127
n
130
ARG
127
A
VAL
128
n
131
VAL
128
A
HIS
129
n
132
HIS
129
A
ASP
130
n
133
ASP
130
A
PRO
131
n
134
PRO
131
A
LYS
132
n
135
LYS
132
A
VAL
133
n
136
VAL
133
A
LEU
134
n
137
LEU
134
A
ILE
135
n
138
ILE
135
A
MET
136
n
139
MET
136
A
ARG
137
n
140
ARG
137
A
GLY
138
n
141
GLY
138
A
GLU
139
n
142
GLU
139
A
GLY
140
n
143
GLY
140
A
GLY
141
n
144
GLY
141
A
ARG
142
n
145
ARG
142
A
GLU
143
n
146
GLU
143
A
PHE
144
n
147
PHE
144
A
LEU
145
n
148
LEU
145
A
ALA
146
n
149
ALA
146
A
GLU
147
n
150
GLU
147
A
ARG
148
n
151
ARG
148
A
LEU
149
n
152
LEU
149
A
ARG
150
n
153
ARG
150
A
GLY
151
n
154
GLY
151
A
GLN
152
n
155
GLN
152
A
GLY
153
n
156
GLY
153
A
VAL
154
n
157
VAL
154
A
GLN
155
n
158
GLN
155
A
VAL
156
n
159
VAL
156
A
ASP
157
n
160
ASP
157
A
TYR
158
n
161
TYR
158
A
LEU
159
n
162
LEU
159
A
PRO
160
n
163
PRO
160
A
LEU
161
n
164
LEU
161
A
TYR
162
n
165
TYR
162
A
ARG
163
n
166
ARG
163
A
ARG
164
n
167
ARG
164
A
ARG
165
n
168
ARG
165
A
ALA
166
n
169
ALA
166
A
PRO
167
n
170
PRO
167
A
ASP
168
n
171
ASP
168
A
TYR
169
n
172
TYR
169
A
PRO
170
n
173
PRO
170
A
ALA
171
n
174
ALA
171
A
GLY
172
n
175
GLY
172
A
GLU
173
n
176
GLU
173
A
LEU
174
n
177
LEU
174
A
LEU
175
n
178
LEU
175
A
ALA
176
n
179
ALA
176
A
ARG
177
n
180
ARG
177
A
VAL
178
n
181
VAL
178
A
ARG
179
n
182
ARG
179
A
ALA
180
n
183
ALA
180
A
GLU
181
n
184
GLU
181
A
ARG
182
n
185
ARG
182
A
LEU
183
n
186
LEU
183
A
ASN
184
n
187
ASN
184
A
GLY
185
n
188
GLY
185
A
LEU
186
n
189
LEU
186
A
VAL
187
n
190
VAL
187
A
VAL
188
n
191
VAL
188
A
SER
189
n
192
SER
189
A
SER
190
n
193
SER
190
A
GLY
191
n
194
GLY
191
A
GLN
192
n
195
GLN
192
A
GLY
193
n
196
GLY
193
A
LEU
194
n
197
LEU
194
A
GLN
195
n
198
GLN
195
A
ASN
196
n
199
ASN
196
A
LEU
197
n
200
LEU
197
A
TYR
198
n
201
TYR
198
A
GLN
199
n
202
GLN
199
A
LEU
200
n
203
LEU
200
A
ALA
201
n
204
ALA
201
A
ALA
202
n
205
ALA
202
A
ALA
203
n
206
ALA
203
A
ASP
204
n
207
ASP
204
A
TRP
205
n
208
TRP
205
A
PRO
206
n
209
PRO
206
A
GLU
207
n
210
GLU
207
A
ILE
208
n
211
ILE
208
A
GLY
209
n
212
GLY
209
A
ARG
210
n
213
ARG
210
A
LEU
211
n
214
LEU
211
A
PRO
212
n
215
PRO
212
A
LEU
213
n
216
LEU
213
A
PHE
214
n
217
PHE
214
A
VAL
215
n
218
VAL
215
A
PRO
216
n
219
PRO
216
A
SER
217
n
220
SER
217
A
PRO
218
n
221
PRO
218
A
ARG
219
n
222
ARG
219
A
VAL
220
n
223
VAL
220
A
ALA
221
n
224
ALA
221
A
GLU
222
n
225
GLU
222
A
MET
223
n
226
MET
223
A
ALA
224
n
227
ALA
224
A
ARG
225
n
228
ARG
225
A
GLU
226
n
229
GLU
226
A
LEU
227
n
230
LEU
227
A
GLY
228
n
231
GLY
228
A
ALA
229
n
232
ALA
229
A
GLN
230
n
233
GLN
230
A
ARG
231
n
234
ARG
231
A
VAL
232
n
235
VAL
232
A
ILE
233
n
236
ILE
233
A
ASP
234
n
237
ASP
234
A
CYS
235
n
238
CYS
235
A
ARG
236
n
239
ARG
236
A
GLY
237
n
240
GLY
237
A
ALA
238
n
241
ALA
238
A
SER
239
n
242
SER
239
A
ALA
240
n
243
ALA
240
A
PRO
241
n
244
PRO
241
A
ALA
242
n
245
ALA
242
A
LEU
243
n
246
LEU
243
A
LEU
244
n
247
LEU
244
A
ALA
245
n
248
ALA
245
A
ALA
246
n
249
ALA
246
A
LEU
247
n
250
LEU
247
A
THR
248
n
251
THR
248
A
SER
249
n
252
SER
249
A
ALA
250
n
253
ALA
250
A
ALA
251
n
254
ALA
251
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
30
A
O
SER
33
A
N
LEU
6
A
N
LEU
9
A
N
LEU
7
A
N
LEU
10
A
O
VAL
187
A
O
VAL
190
A
N
LEU
186
A
N
LEU
189
A
O
PHE
214
A
O
PHE
217
A
N
LEU
213
A
N
LEU
216
A
O
ILE
233
A
O
ILE
236
A
N
ALA
36
A
N
ALA
39
A
O
ARG
165
A
O
ARG
168
A
O
THR
105
A
O
THR
108
A
N
TRP
86
A
N
TRP
89
A
O
CYS
87
A
O
CYS
90
A
N
VAL
59
A
N
VAL
62
A
N
VAL
60
A
N
VAL
63
A
O
MET
136
A
O
MET
139
A
N
ILE
135
A
N
ILE
138
A
O
ASP
157
A
O
ASP
160
1
A
GLY
-2
A
GLY
1
1
Y
1
A
SER
-1
A
SER
2
1
Y
1
A
HIS
0
A
HIS
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
SER
2
A
SER
5
1
Y
1
A
ARG
10
-44.44
153.07
1
A
ARG
137
-162.39
-168.37
1
A
ALA
202
46.84
-123.33
1
A
ARG
236
-91.24
54.84
39.413
0.37
0.00
0.00
0.37
0.00
-0.73
0.946
0.931
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.25183
0.21234
0.21428
2.22
41.76
940
17976
17976
5.0
98.75
5.775
0.143
RANDOM
1
Isotropic
THROUGHOUT
3.1
3.1
SAD
0.217
0.191
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
MASK
0.191
2.22
41.76
98
2005
2
0
1905
0.010
0.022
1953
1.174
1.999
2664
5.562
5.000
250
32.867
22.529
87
16.398
15.000
311
16.468
15.000
24
0.071
0.200
299
0.005
0.022
1517
0.625
1.500
1248
1.201
2.000
1991
1.752
3.000
705
3.068
4.500
672
0.452
0.381
2.278
64
1246
1246
20
93.71
42.1
2.22
66.04
4ES6
18993
18993
3.1
3.1
0.084
0.084
1
12.0
6.3
99
0.539
2.22
2.34
3.1
2611
0.539
1
4.3
95.5
data collection
ADSC
Quantum
phasing
SHELXS
refinement
REFMAC
5.5.0110
data reduction
MOSFLM
data scaling
SCALA
Crystal structure of HemD (PA5259) from Pseudomonas aeruginosa (PAO1) at 2.22 A resolution
1
N
N
2
N
N
2
N
N
3
N
N
A
PRO
11
A
PRO
14
HELX_P
A
ALA
25
A
ALA
28
1
1
15
A
THR
43
A
THR
46
HELX_P
A
ASP
52
A
ASP
55
1
2
10
A
LEU
53
A
LEU
56
HELX_P
A
TYR
56
A
TYR
59
5
3
4
A
SER
63
A
SER
66
HELX_P
A
TRP
78
A
TRP
81
1
4
16
A
GLY
90
A
GLY
93
HELX_P
A
GLY
101
A
GLY
104
1
5
12
A
ASP
112
A
ASP
115
HELX_P
A
ALA
118
A
ALA
121
1
6
7
A
LEU
119
A
LEU
122
HELX_P
A
LEU
126
A
LEU
129
1
7
8
A
GLU
143
A
GLU
146
HELX_P
A
GLN
152
A
GLN
155
1
8
10
A
GLY
172
A
GLY
175
HELX_P
A
GLU
181
A
GLU
184
1
9
10
A
SER
190
A
SER
193
HELX_P
A
ALA
202
A
ALA
205
1
10
13
A
ASP
204
A
ASP
207
HELX_P
A
GLY
209
A
GLY
212
1
11
6
A
SER
217
A
SER
220
HELX_P
A
LEU
227
A
LEU
230
1
12
11
A
SER
239
A
SER
242
HELX_P
A
ALA
250
A
ALA
253
1
13
12
LYASE
HEME-biosynthesis, Uroporphyrinogen-III synthase, cytoplasmic, LYASE
HEM4_PSEAE
UNP
1
1
P48246
MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRYWPQ
PPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLP
LYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASA
PALLAALTSAA
1
251
4ES6
1
251
P48246
A
1
4
254
1
expression tag
GLY
-2
4ES6
A
P48246
UNP
1
1
expression tag
SER
-1
4ES6
A
P48246
UNP
2
1
expression tag
HIS
0
4ES6
A
P48246
UNP
3
5
2
5
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
A
HIS
28
A
HIS
31
A
SER
31
A
SER
34
A
ARG
5
A
ARG
8
A
LEU
8
A
LEU
11
A
GLY
185
A
GLY
188
A
VAL
187
A
VAL
190
A
LEU
213
A
LEU
216
A
VAL
215
A
VAL
218
A
VAL
232
A
VAL
235
A
ASP
234
A
ASP
237
A
ALA
36
A
ALA
39
A
PRO
39
A
PRO
42
A
TYR
162
A
TYR
165
A
ARG
165
A
ARG
168
A
VAL
104
A
VAL
107
A
THR
105
A
THR
108
A
THR
85
A
THR
88
A
SER
88
A
SER
91
A
ALA
58
A
ALA
61
A
VAL
61
A
VAL
64
A
LYS
132
A
LYS
135
A
ARG
137
A
ARG
140
A
GLN
155
A
GLN
158
A
PRO
160
A
PRO
163
BINDING SITE FOR RESIDUE CL A 301
A
CL
301
Software
3
BINDING SITE FOR RESIDUE CL A 302
A
CL
302
Software
3
A
THR
9
A
THR
12
3
1_555
A
ARG
10
A
ARG
13
3
1_555
A
VAL
187
A
VAL
190
3
1_555
A
GLU
139
A
GLU
142
3
1_555
A
GLY
140
A
GLY
143
3
1_555
A
ARG
164
A
ARG
167
3
1_555
96
P 43 21 2