0.021073
0.000000
0.003096
0.000000
0.027837
0.000000
0.000000
0.000000
0.020498
0.000000
0.000000
0.000000
Cavazos, A.
Prigozhin, D.M.
Alber, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
98.360
90.000
47.455
35.923
49.308
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C8 H19 N O5
209.240
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
BIS-TRIS BUFFER
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
Tb 3
158.925
TERBIUM(III) ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
422
488
494
10.1016/j.jmb.2012.06.011
22727744
Structure of the sensor domain of Mycobacterium tuberculosis PknH receptor kinase reveals a conserved binding cleft.
2012
100
1
CCD
2011-09-27
ADSC QUANTUM 315r
Double flat crystal, Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.1159
1.0
17.44
69365
0.061
1.01
1.700
50.000
18089
98.80
3.80
8.3.1
ALS
1.1159
SYNCHROTRON
ALS BEAMLINE 8.3.1
20661.994
Serine/threonine protein kinase
unp residues 83332-83523
1
man
polymer
209.240
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
1
syn
non-polymer
158.925
TERBIUM(III) ION
2
syn
non-polymer
18.015
water
221
nat
water
no
no
GHQPVAEERLSALLLNSSEVNAVMGSSSMQPGKPITSMDSSPVTVSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGD
NYEHWVNQAVVAFPTADKARAFVQTSADKWKNCAGKTVTVTNKAKTYRWTFADVKGSPPTITVIDTQEGAEGWECQRAMS
VANNVVVDVNACGYQITNQAGQIAAKIVDKVNKE
GHQPVAEERLSALLLNSSEVNAVMGSSSMQPGKPITSMDSSPVTVSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGD
NYEHWVNQAVVAFPTADKARAFVQTSADKWKNCAGKTVTVTNKAKTYRWTFADVKGSPPTITVIDTQEGAEGWECQRAMS
VANNVVVDVNACGYQITNQAGQIAAKIVDKVNKE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
H37Rv
sample
pknH, Rv1266c
83332
Mycobacterium tuberculosis
511693
Escherichia coli
BL21 (DE3) CodonPlus
PLASMID
1
2.01
38.88
VAPOR DIFFUSION
5.5
0.1 M Bis-Tris, 0.2 M ammonium acetate, 25% PEG 3350, 50mM terbium nitrate, pH 5.5, VAPOR DIFFUSION, temperature 291K
291
software
repository
Initial release
Database references
Refinement description
1
0
2012-07-18
1
1
2013-01-02
1
2
2017-11-15
RCSB
Y
RCSB
2012-04-23
REL
REL
0.040
0.980
99.70
3.80
0.055
0.960
99.90
3.80
0.061
1.081
99.70
3.90
0.068
1.026
99.60
3.90
0.073
1.077
99.10
3.90
0.086
1.064
98.90
3.90
0.108
1.010
98.20
3.90
0.148
1.005
97.70
3.80
0.198
1.017
97.50
3.80
0.253
0.927
98.10
3.80
BTB
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TB
TERBIUM(III) ION
HOH
water
BTB
1
2
BTB
BTB
701
A
TB
2
3
TB
TB
702
A
TB
3
3
TB
TB
703
A
HOH
1
4
HOH
HOH
801
A
HOH
2
4
HOH
HOH
802
A
HOH
3
4
HOH
HOH
803
A
HOH
4
4
HOH
HOH
804
A
HOH
5
4
HOH
HOH
805
A
HOH
6
4
HOH
HOH
806
A
HOH
7
4
HOH
HOH
807
A
HOH
8
4
HOH
HOH
808
A
HOH
9
4
HOH
HOH
809
A
HOH
10
4
HOH
HOH
810
A
HOH
11
4
HOH
HOH
811
A
HOH
12
4
HOH
HOH
812
A
HOH
13
4
HOH
HOH
813
A
HOH
14
4
HOH
HOH
814
A
HOH
15
4
HOH
HOH
815
A
HOH
16
4
HOH
HOH
816
A
HOH
17
4
HOH
HOH
817
A
HOH
18
4
HOH
HOH
818
A
HOH
19
4
HOH
HOH
819
A
HOH
20
4
HOH
HOH
820
A
HOH
21
4
HOH
HOH
821
A
HOH
22
4
HOH
HOH
822
A
HOH
23
4
HOH
HOH
823
A
HOH
24
4
HOH
HOH
824
A
HOH
25
4
HOH
HOH
825
A
HOH
26
4
HOH
HOH
826
A
HOH
27
4
HOH
HOH
827
A
HOH
28
4
HOH
HOH
828
A
HOH
29
4
HOH
HOH
829
A
HOH
30
4
HOH
HOH
830
A
HOH
31
4
HOH
HOH
831
A
HOH
32
4
HOH
HOH
832
A
HOH
33
4
HOH
HOH
833
A
HOH
34
4
HOH
HOH
834
A
HOH
35
4
HOH
HOH
835
A
HOH
36
4
HOH
HOH
836
A
HOH
37
4
HOH
HOH
837
A
HOH
38
4
HOH
HOH
838
A
HOH
39
4
HOH
HOH
839
A
HOH
40
4
HOH
HOH
840
A
HOH
41
4
HOH
HOH
841
A
HOH
42
4
HOH
HOH
842
A
HOH
43
4
HOH
HOH
843
A
HOH
44
4
HOH
HOH
844
A
HOH
45
4
HOH
HOH
845
A
HOH
46
4
HOH
HOH
846
A
HOH
47
4
HOH
HOH
847
A
HOH
48
4
HOH
HOH
848
A
HOH
49
4
HOH
HOH
849
A
HOH
50
4
HOH
HOH
850
A
HOH
51
4
HOH
HOH
851
A
HOH
52
4
HOH
HOH
852
A
HOH
53
4
HOH
HOH
853
A
HOH
54
4
HOH
HOH
854
A
HOH
55
4
HOH
HOH
855
A
HOH
56
4
HOH
HOH
856
A
HOH
57
4
HOH
HOH
857
A
HOH
58
4
HOH
HOH
858
A
HOH
59
4
HOH
HOH
859
A
HOH
60
4
HOH
HOH
860
A
HOH
61
4
HOH
HOH
861
A
HOH
62
4
HOH
HOH
862
A
HOH
63
4
HOH
HOH
863
A
HOH
64
4
HOH
HOH
864
A
HOH
65
4
HOH
HOH
865
A
HOH
66
4
HOH
HOH
866
A
HOH
67
4
HOH
HOH
867
A
HOH
68
4
HOH
HOH
868
A
HOH
69
4
HOH
HOH
869
A
HOH
70
4
HOH
HOH
870
A
HOH
71
4
HOH
HOH
871
A
HOH
72
4
HOH
HOH
872
A
HOH
73
4
HOH
HOH
873
A
HOH
74
4
HOH
HOH
874
A
HOH
75
4
HOH
HOH
875
A
HOH
76
4
HOH
HOH
876
A
HOH
77
4
HOH
HOH
877
A
HOH
78
4
HOH
HOH
878
A
HOH
79
4
HOH
HOH
879
A
HOH
80
4
HOH
HOH
880
A
HOH
81
4
HOH
HOH
881
A
HOH
82
4
HOH
HOH
882
A
HOH
83
4
HOH
HOH
883
A
HOH
84
4
HOH
HOH
884
A
HOH
85
4
HOH
HOH
885
A
HOH
86
4
HOH
HOH
886
A
HOH
87
4
HOH
HOH
887
A
HOH
88
4
HOH
HOH
888
A
HOH
89
4
HOH
HOH
889
A
HOH
90
4
HOH
HOH
890
A
HOH
91
4
HOH
HOH
891
A
HOH
92
4
HOH
HOH
892
A
HOH
93
4
HOH
HOH
893
A
HOH
94
4
HOH
HOH
894
A
HOH
95
4
HOH
HOH
895
A
HOH
96
4
HOH
HOH
896
A
HOH
97
4
HOH
HOH
897
A
HOH
98
4
HOH
HOH
898
A
HOH
99
4
HOH
HOH
899
A
HOH
100
4
HOH
HOH
900
A
HOH
101
4
HOH
HOH
901
A
HOH
102
4
HOH
HOH
902
A
HOH
103
4
HOH
HOH
903
A
HOH
104
4
HOH
HOH
904
A
HOH
105
4
HOH
HOH
905
A
HOH
106
4
HOH
HOH
906
A
HOH
107
4
HOH
HOH
907
A
HOH
108
4
HOH
HOH
908
A
HOH
109
4
HOH
HOH
909
A
HOH
110
4
HOH
HOH
910
A
HOH
111
4
HOH
HOH
911
A
HOH
112
4
HOH
HOH
912
A
HOH
113
4
HOH
HOH
913
A
HOH
114
4
HOH
HOH
914
A
HOH
115
4
HOH
HOH
915
A
HOH
116
4
HOH
HOH
916
A
HOH
117
4
HOH
HOH
917
A
HOH
118
4
HOH
HOH
918
A
HOH
119
4
HOH
HOH
919
A
HOH
120
4
HOH
HOH
920
A
HOH
121
4
HOH
HOH
921
A
HOH
122
4
HOH
HOH
922
A
HOH
123
4
HOH
HOH
923
A
HOH
124
4
HOH
HOH
924
A
HOH
125
4
HOH
HOH
925
A
HOH
126
4
HOH
HOH
926
A
HOH
127
4
HOH
HOH
927
A
HOH
128
4
HOH
HOH
928
A
HOH
129
4
HOH
HOH
929
A
HOH
130
4
HOH
HOH
930
A
HOH
131
4
HOH
HOH
931
A
HOH
132
4
HOH
HOH
932
A
HOH
133
4
HOH
HOH
933
A
HOH
134
4
HOH
HOH
934
A
HOH
135
4
HOH
HOH
935
A
HOH
136
4
HOH
HOH
936
A
HOH
137
4
HOH
HOH
937
A
HOH
138
4
HOH
HOH
938
A
HOH
139
4
HOH
HOH
939
A
HOH
140
4
HOH
HOH
940
A
HOH
141
4
HOH
HOH
941
A
HOH
142
4
HOH
HOH
942
A
HOH
143
4
HOH
HOH
943
A
HOH
144
4
HOH
HOH
944
A
HOH
145
4
HOH
HOH
945
A
HOH
146
4
HOH
HOH
946
A
HOH
147
4
HOH
HOH
947
A
HOH
149
4
HOH
HOH
948
A
HOH
150
4
HOH
HOH
949
A
HOH
151
4
HOH
HOH
950
A
HOH
152
4
HOH
HOH
951
A
HOH
153
4
HOH
HOH
952
A
HOH
154
4
HOH
HOH
953
A
HOH
155
4
HOH
HOH
954
A
HOH
156
4
HOH
HOH
955
A
HOH
157
4
HOH
HOH
956
A
HOH
158
4
HOH
HOH
957
A
HOH
159
4
HOH
HOH
958
A
HOH
160
4
HOH
HOH
959
A
HOH
161
4
HOH
HOH
960
A
HOH
162
4
HOH
HOH
961
A
HOH
163
4
HOH
HOH
962
A
HOH
164
4
HOH
HOH
963
A
HOH
165
4
HOH
HOH
964
A
HOH
166
4
HOH
HOH
965
A
HOH
167
4
HOH
HOH
966
A
HOH
168
4
HOH
HOH
967
A
HOH
169
4
HOH
HOH
968
A
HOH
170
4
HOH
HOH
969
A
HOH
171
4
HOH
HOH
970
A
HOH
172
4
HOH
HOH
971
A
HOH
173
4
HOH
HOH
972
A
HOH
174
4
HOH
HOH
973
A
HOH
175
4
HOH
HOH
974
A
HOH
176
4
HOH
HOH
975
A
HOH
177
4
HOH
HOH
976
A
HOH
178
4
HOH
HOH
977
A
HOH
179
4
HOH
HOH
978
A
HOH
180
4
HOH
HOH
979
A
HOH
181
4
HOH
HOH
980
A
HOH
182
4
HOH
HOH
981
A
HOH
183
4
HOH
HOH
982
A
HOH
184
4
HOH
HOH
983
A
HOH
185
4
HOH
HOH
984
A
HOH
186
4
HOH
HOH
985
A
HOH
187
4
HOH
HOH
986
A
HOH
188
4
HOH
HOH
987
A
HOH
189
4
HOH
HOH
988
A
HOH
190
4
HOH
HOH
989
A
HOH
191
4
HOH
HOH
990
A
HOH
192
4
HOH
HOH
991
A
HOH
193
4
HOH
HOH
992
A
HOH
194
4
HOH
HOH
993
A
HOH
195
4
HOH
HOH
994
A
HOH
196
4
HOH
HOH
995
A
HOH
197
4
HOH
HOH
996
A
HOH
198
4
HOH
HOH
997
A
HOH
199
4
HOH
HOH
998
A
HOH
200
4
HOH
HOH
999
A
HOH
201
4
HOH
HOH
1000
A
HOH
202
4
HOH
HOH
1001
A
HOH
203
4
HOH
HOH
1002
A
HOH
205
4
HOH
HOH
1003
A
HOH
206
4
HOH
HOH
1004
A
HOH
207
4
HOH
HOH
1005
A
HOH
208
4
HOH
HOH
1006
A
HOH
209
4
HOH
HOH
1007
A
HOH
210
4
HOH
HOH
1008
A
HOH
211
4
HOH
HOH
1009
A
HOH
212
4
HOH
HOH
1010
A
HOH
213
4
HOH
HOH
1011
A
HOH
214
4
HOH
HOH
1012
A
HOH
215
4
HOH
HOH
1013
A
HOH
216
4
HOH
HOH
1014
A
HOH
217
4
HOH
HOH
1015
A
HOH
218
4
HOH
HOH
1016
A
HOH
219
4
HOH
HOH
1017
A
HOH
220
4
HOH
HOH
1018
A
HOH
221
4
HOH
HOH
1019
A
HOH
222
4
HOH
HOH
1020
A
HOH
223
4
HOH
HOH
1021
A
0.690
0.710
0.510
8491
7763
728
0.850
0.880
0.670
1147
1008
139
0.830
0.850
0.650
1439
1310
129
0.720
0.740
0.480
1424
1314
110
0.600
0.620
0.340
2517
2354
163
0.510
0.520
0.250
1568
1471
97
GLY
433
n
1
GLY
433
A
HIS
434
n
2
HIS
434
A
GLN
435
n
3
GLN
435
A
PRO
436
n
4
PRO
436
A
VAL
437
n
5
VAL
437
A
ALA
438
n
6
ALA
438
A
GLU
439
n
7
GLU
439
A
GLU
440
n
8
GLU
440
A
ARG
441
n
9
ARG
441
A
LEU
442
n
10
LEU
442
A
SER
443
n
11
SER
443
A
ALA
444
n
12
ALA
444
A
LEU
445
n
13
LEU
445
A
LEU
446
n
14
LEU
446
A
LEU
447
n
15
LEU
447
A
ASN
448
n
16
ASN
448
A
SER
449
n
17
SER
449
A
SER
450
n
18
SER
450
A
GLU
451
n
19
GLU
451
A
VAL
452
n
20
VAL
452
A
ASN
453
n
21
ASN
453
A
ALA
454
n
22
ALA
454
A
VAL
455
n
23
VAL
455
A
MET
456
n
24
MET
456
A
GLY
457
n
25
GLY
457
A
SER
458
n
26
SER
458
A
SER
459
n
27
SER
459
A
SER
460
n
28
SER
460
A
MET
461
n
29
MET
461
A
GLN
462
n
30
GLN
462
A
PRO
463
n
31
PRO
463
A
GLY
464
n
32
GLY
464
A
LYS
465
n
33
LYS
465
A
PRO
466
n
34
PRO
466
A
ILE
467
n
35
ILE
467
A
THR
468
n
36
THR
468
A
SER
469
n
37
SER
469
A
MET
470
n
38
MET
470
A
ASP
471
n
39
ASP
471
A
SER
472
n
40
SER
472
A
SER
473
n
41
SER
473
A
PRO
474
n
42
PRO
474
A
VAL
475
n
43
VAL
475
A
THR
476
n
44
THR
476
A
VAL
477
n
45
VAL
477
A
SER
478
n
46
SER
478
A
LEU
479
n
47
LEU
479
A
PRO
480
n
48
PRO
480
A
ASP
481
n
49
ASP
481
A
CYS
482
n
50
CYS
482
A
GLN
483
n
51
GLN
483
A
GLY
484
n
52
GLY
484
A
ALA
485
n
53
ALA
485
A
LEU
486
n
54
LEU
486
A
TYR
487
n
55
TYR
487
A
THR
488
n
56
THR
488
A
SER
489
n
57
SER
489
A
GLN
490
n
58
GLN
490
A
ASP
491
n
59
ASP
491
A
PRO
492
n
60
PRO
492
A
VAL
493
n
61
VAL
493
A
TYR
494
n
62
TYR
494
A
ALA
495
n
63
ALA
495
A
GLY
496
n
64
GLY
496
A
THR
497
n
65
THR
497
A
GLY
498
n
66
GLY
498
A
TYR
499
n
67
TYR
499
A
THR
500
n
68
THR
500
A
ALA
501
n
69
ALA
501
A
ILE
502
n
70
ILE
502
A
ASN
503
n
71
ASN
503
A
GLY
504
n
72
GLY
504
A
LEU
505
n
73
LEU
505
A
ILE
506
n
74
ILE
506
A
SER
507
n
75
SER
507
A
SER
508
n
76
SER
508
A
GLU
509
n
77
GLU
509
A
PRO
510
n
78
PRO
510
A
GLY
511
n
79
GLY
511
A
ASP
512
n
80
ASP
512
A
ASN
513
n
81
ASN
513
A
TYR
514
n
82
TYR
514
A
GLU
515
n
83
GLU
515
A
HIS
516
n
84
HIS
516
A
TRP
517
n
85
TRP
517
A
VAL
518
n
86
VAL
518
A
ASN
519
n
87
ASN
519
A
GLN
520
n
88
GLN
520
A
ALA
521
n
89
ALA
521
A
VAL
522
n
90
VAL
522
A
VAL
523
n
91
VAL
523
A
ALA
524
n
92
ALA
524
A
PHE
525
n
93
PHE
525
A
PRO
526
n
94
PRO
526
A
THR
527
n
95
THR
527
A
ALA
528
n
96
ALA
528
A
ASP
529
n
97
ASP
529
A
LYS
530
n
98
LYS
530
A
ALA
531
n
99
ALA
531
A
ARG
532
n
100
ARG
532
A
ALA
533
n
101
ALA
533
A
PHE
534
n
102
PHE
534
A
VAL
535
n
103
VAL
535
A
GLN
536
n
104
GLN
536
A
THR
537
n
105
THR
537
A
SER
538
n
106
SER
538
A
ALA
539
n
107
ALA
539
A
ASP
540
n
108
ASP
540
A
LYS
541
n
109
LYS
541
A
TRP
542
n
110
TRP
542
A
LYS
543
n
111
LYS
543
A
ASN
544
n
112
ASN
544
A
CYS
545
n
113
CYS
545
A
ALA
546
n
114
ALA
546
A
GLY
547
n
115
GLY
547
A
LYS
548
n
116
LYS
548
A
THR
549
n
117
THR
549
A
VAL
550
n
118
VAL
550
A
THR
551
n
119
THR
551
A
VAL
552
n
120
VAL
552
A
THR
553
n
121
THR
553
A
ASN
554
n
122
ASN
554
A
LYS
555
n
123
LYS
555
A
ALA
556
n
124
ALA
556
A
LYS
557
n
125
LYS
557
A
THR
558
n
126
THR
558
A
TYR
559
n
127
TYR
559
A
ARG
560
n
128
ARG
560
A
TRP
561
n
129
TRP
561
A
THR
562
n
130
THR
562
A
PHE
563
n
131
PHE
563
A
ALA
564
n
132
ALA
564
A
ASP
565
n
133
ASP
565
A
VAL
566
n
134
VAL
566
A
LYS
567
n
135
LYS
567
A
GLY
568
n
136
GLY
568
A
SER
569
n
137
SER
569
A
PRO
570
n
138
PRO
570
A
PRO
571
n
139
PRO
571
A
THR
572
n
140
THR
572
A
ILE
573
n
141
ILE
573
A
THR
574
n
142
THR
574
A
VAL
575
n
143
VAL
575
A
ILE
576
n
144
ILE
576
A
ASP
577
n
145
ASP
577
A
THR
578
n
146
THR
578
A
GLN
579
n
147
GLN
579
A
GLU
580
n
148
GLU
580
A
GLY
581
n
149
GLY
581
A
ALA
582
n
150
ALA
582
A
GLU
583
n
151
GLU
583
A
GLY
584
n
152
GLY
584
A
TRP
585
n
153
TRP
585
A
GLU
586
n
154
GLU
586
A
CYS
587
n
155
CYS
587
A
GLN
588
n
156
GLN
588
A
ARG
589
n
157
ARG
589
A
ALA
590
n
158
ALA
590
A
MET
591
n
159
MET
591
A
SER
592
n
160
SER
592
A
VAL
593
n
161
VAL
593
A
ALA
594
n
162
ALA
594
A
ASN
595
n
163
ASN
595
A
ASN
596
n
164
ASN
596
A
VAL
597
n
165
VAL
597
A
VAL
598
n
166
VAL
598
A
VAL
599
n
167
VAL
599
A
ASP
600
n
168
ASP
600
A
VAL
601
n
169
VAL
601
A
ASN
602
n
170
ASN
602
A
ALA
603
n
171
ALA
603
A
CYS
604
n
172
CYS
604
A
GLY
605
n
173
GLY
605
A
TYR
606
n
174
TYR
606
A
GLN
607
n
175
GLN
607
A
ILE
608
n
176
ILE
608
A
THR
609
n
177
THR
609
A
ASN
610
n
178
ASN
610
A
GLN
611
n
179
GLN
611
A
ALA
612
n
180
ALA
612
A
GLY
613
n
181
GLY
613
A
GLN
614
n
182
GLN
614
A
ILE
615
n
183
ILE
615
A
ALA
616
n
184
ALA
616
A
ALA
617
n
185
ALA
617
A
LYS
618
n
186
LYS
618
A
ILE
619
n
187
ILE
619
A
VAL
620
n
188
VAL
620
A
ASP
621
n
189
ASP
621
A
LYS
622
n
190
LYS
622
A
VAL
623
n
191
VAL
623
A
ASN
624
n
192
ASN
624
A
LYS
625
n
193
LYS
625
A
GLU
626
n
194
GLU
626
A
author_and_software_defined_assembly
PISA
1
monomeric
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O8
BTB
1_555
104.8
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1017
E
O
HOH
1_555
68.6
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1017
E
O
HOH
1_555
146.1
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O6
BTB
1_555
123.8
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O6
BTB
1_555
83.0
A
HOH
1017
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O6
BTB
1_555
129.1
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1008
E
O
HOH
1_555
71.9
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1008
E
O
HOH
1_555
68.3
A
HOH
1017
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1008
E
O
HOH
1_555
78.3
A
BTB
701
B
O6
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1008
E
O
HOH
1_555
150.7
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
N
BTB
1_555
70.9
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
N
BTB
1_555
75.1
A
HOH
1017
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
N
BTB
1_555
128.2
A
BTB
701
B
O6
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
N
BTB
1_555
57.4
A
HOH
1008
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
N
BTB
1_555
117.6
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
113.8
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
95.0
A
HOH
1017
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
61.3
A
BTB
701
B
O6
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
120.9
A
HOH
1008
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
58.4
A
BTB
701
B
N
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
170.0
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
60.6
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
134.2
A
HOH
1017
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
73.3
A
BTB
701
B
O6
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
74.3
A
HOH
1008
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
130.7
A
BTB
701
B
N
BTB
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
59.1
A
HOH
1016
E
O
HOH
1_555
A
TB
702
C
TB
TB
1_555
A
BTB
701
B
O4
BTB
1_555
130.8
A
HOH
1019
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
ASP
471
A
OD2
ASP
39
1_555
125.7
A
HOH
1019
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1018
E
O
HOH
1_555
61.7
A
ASP
471
A
OD2
ASP
39
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1018
E
O
HOH
1_555
64.9
A
HOH
1019
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1020
E
O
HOH
1_555
142.8
A
ASP
471
A
OD2
ASP
39
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1020
E
O
HOH
1_555
91.3
A
HOH
1018
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1020
E
O
HOH
1_555
151.6
A
HOH
1019
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1002
E
O
HOH
1_555
90.9
A
ASP
471
A
OD2
ASP
39
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1002
E
O
HOH
1_555
82.9
A
HOH
1018
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1002
E
O
HOH
1_555
73.2
A
HOH
1020
E
O
HOH
1_555
A
TB
703
D
TB
TB
1_555
A
HOH
1002
E
O
HOH
1_555
89.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
462
A
N
GLN
30
A
O
SER
508
A
O
SER
76
A
N
SER
507
A
N
SER
75
A
O
VAL
518
A
O
VAL
86
A
N
TRP
517
A
N
TRP
85
A
O
CYS
604
A
O
CYS
172
A
O
ALA
603
A
O
ALA
171
A
N
GLN
588
A
N
GLN
156
A
O
ARG
589
A
O
ARG
157
A
N
VAL
575
A
N
VAL
143
A
O
THR
578
A
O
THR
146
A
N
THR
562
A
N
THR
130
A
O
TYR
559
A
O
TYR
127
A
N
VAL
552
A
N
VAL
120
A
O
THR
553
A
O
THR
121
A
N
THR
476
A
N
THR
44
1
A
A
O
O
HOH
HOH
943
991
2.09
1
A
A
O
O
THR
HOH
549
982
2.15
1
A
LYS
567
-122.75
-165.49
1
A
ASN
595
53.59
-132.69
1
A
THR
609
-129.15
-63.69
1
A
ASN
610
-143.48
30.46
55.600
18.0416
7.580
-1.7031
-0.0000
-2.6978
-0.8074
0.0000
2.5105
0.1974
0.1630
0.1647
1.7000
48.7840
878
34190
34190
4.9200
96.6700
1.000
0.230
0.3900
RANDOM
1
1.350
SAD
19.0900
0.8300
1.1000
ML
FLAT BULK SOLVENT MODEL
28.9340
0.3170
1.7000
48.7840
221
1685
16
0
1448
0.013
1522
0.960
2084
0.060
236
0.004
270
18.747
556
0.2368
0.2261
1.7505
137
2595
2732
12
94.0000
0.2681
0.1985
1.8070
147
2635
2782
12
94.0000
0.2165
0.1842
1.8716
122
2686
2808
12
96.0000
0.2169
0.1635
1.9465
148
2663
2811
12
96.0000
0.2132
0.1531
2.0351
144
2710
2854
12
96.0000
0.1730
0.1512
2.1424
141
2707
2848
12
96.0000
0.2173
0.1523
2.2767
145
2735
2880
12
97.0000
0.1967
0.1703
2.4524
133
2720
2853
12
98.0000
0.2281
0.1781
2.6992
142
2756
2898
12
98.0000
0.1899
0.1739
3.0897
144
2755
2899
12
98.0000
0.1721
0.1538
3.8925
133
2775
2908
12
98.0000
0.1787
0.1461
48.8042
147
2770
2917
12
99.0000
1.700
50.000
4ESQ
34200
0.061
1.015
1
17.100
3.800
98.800
0.253
1.700
1.760
1760
0.927
1
3.800
98.100
0.198
1.760
1.830
1768
1.017
1
3.800
97.500
0.148
1.830
1.910
1786
1.005
1
3.800
97.700
0.108
1.910
2.020
1760
1.010
1
3.900
98.200
0.086
2.020
2.140
1817
1.064
1
3.900
98.900
0.073
2.140
2.310
1780
1.077
1
3.900
99.100
0.068
2.310
2.540
1841
1.026
1
3.900
99.600
0.061
2.540
2.910
1827
1.081
1
3.900
99.700
0.055
2.910
3.660
1853
0.960
1
3.800
99.900
0.040
3.660
50.000
1897
0.980
1
3.800
99.700
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
program
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Tom Terwilliger
terwilliger@LANL.gov
24-Feb-2008
http://www.solve.lanl.gov/
SOLVE
program
2.13
phasing
Thomas C. Terwilliger
terwilliger@lanl.gov
20-Mar-2010
http://www.solve.lanl.gov/
RESOLVE
program
2.15
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.1_743
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
Serine/threonine protein kinase
Crystal structure of the extracellular domain of PknH from Mycobacterium tuberculosis
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
A
ALA
438
A
ALA
6
HELX_P
A
LEU
446
A
LEU
14
5
1
9
A
ASN
448
A
ASN
16
HELX_P
A
GLY
457
A
GLY
25
1
2
10
A
LEU
479
A
LEU
47
HELX_P
A
ASP
481
A
ASP
49
5
3
3
A
CYS
482
A
CYS
50
HELX_P
A
TYR
487
A
TYR
55
1
4
6
A
GLN
490
A
GLN
58
HELX_P
A
ALA
495
A
ALA
63
1
5
6
A
THR
527
A
THR
95
HELX_P
A
ASN
544
A
ASN
112
1
6
18
A
ASN
610
A
ASN
178
HELX_P
A
LYS
625
A
LYS
193
1
7
16
disulf
2.036
A
CYS
482
A
SG
CYS
50
1_555
A
CYS
545
A
SG
CYS
113
1_555
disulf
2.049
A
CYS
587
A
SG
CYS
155
1_555
A
CYS
604
A
SG
CYS
172
1_555
metalc
2.336
A
BTB
701
B
O1
BTB
1_555
A
TB
702
C
TB
TB
1_555
metalc
2.380
A
BTB
701
B
O8
BTB
1_555
A
TB
702
C
TB
TB
1_555
metalc
2.418
A
TB
702
C
TB
TB
1_555
A
HOH
1017
E
O
HOH
1_555
metalc
2.471
A
TB
703
D
TB
TB
1_555
A
HOH
1019
E
O
HOH
1_555
metalc
2.515
A
ASP
471
A
OD2
ASP
39
1_555
A
TB
703
D
TB
TB
1_555
metalc
2.561
A
BTB
701
B
O6
BTB
1_555
A
TB
702
C
TB
TB
1_555
metalc
2.570
A
TB
702
C
TB
TB
1_555
A
HOH
1008
E
O
HOH
1_555
metalc
2.598
A
TB
703
D
TB
TB
1_555
A
HOH
1018
E
O
HOH
1_555
metalc
2.617
A
BTB
701
B
N
BTB
1_555
A
TB
702
C
TB
TB
1_555
metalc
2.703
A
TB
702
C
TB
TB
1_555
A
HOH
1016
E
O
HOH
1_555
metalc
2.808
A
TB
703
D
TB
TB
1_555
A
HOH
1020
E
O
HOH
1_555
metalc
3.067
A
BTB
701
B
O4
BTB
1_555
A
TB
702
C
TB
TB
1_555
metalc
3.266
A
TB
703
D
TB
TB
1_555
A
HOH
1002
E
O
HOH
1_555
TRANSFERASE
Receptor Kinase, Membrane, TRANSFERASE
A
PRO
570
A
PRO
138
1
A
PRO
571
A
PRO
139
-0.44
A5U1W4_MYCTA
UNP
1
83332
A5U1W4
QPVAEERLSALLLNSSEVNAVMGSSSMQPGKPITSMDSSPVTVSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNY
EHWVNQAVVAFPTADKARAFVQTSADKWKNCAGKTVTVTNKAKTYRWTFADVKGSPPTITVIDTQEGAEGWECQRAMSVA
NNVVVDVNACGYQITNQAGQIAAKIVDKVNKE
83332
83523
4ESQ
435
626
A5U1W4
A
1
3
194
1
EXPRESSION TAG
GLY
433
4ESQ
A
A5U1W4
UNP
1
1
EXPRESSION TAG
HIS
434
4ESQ
A
A5U1W4
UNP
2
9
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
462
A
GLN
30
A
PRO
463
A
PRO
31
A
ALA
501
A
ALA
69
A
SER
508
A
SER
76
A
HIS
516
A
HIS
84
A
ALA
524
A
ALA
92
A
VAL
597
A
VAL
165
A
GLY
605
A
GLY
173
A
GLU
586
A
GLU
154
A
ALA
594
A
ALA
162
A
ILE
573
A
ILE
141
A
GLN
579
A
GLN
147
A
LYS
557
A
LYS
125
A
PHE
563
A
PHE
131
A
THR
549
A
THR
117
A
ASN
554
A
ASN
122
A
THR
476
A
THR
44
A
VAL
477
A
VAL
45
BINDING SITE FOR RESIDUE BTB A 701
Software
12
BINDING SITE FOR RESIDUE TB A 702
Software
4
BINDING SITE FOR RESIDUE TB A 703
Software
4
A
ASP
512
A
ASP
80
12
1_555
A
ASN
513
A
ASN
81
12
1_555
A
TYR
514
A
TYR
82
12
1_555
A
GLN
579
A
GLN
147
12
1_555
A
GLU
583
A
GLU
151
12
1_555
A
TRP
585
A
TRP
153
12
1_555
A
TB
702
C
TB
12
1_555
A
HOH
980
E
HOH
12
1_555
A
HOH
987
E
HOH
12
1_555
A
HOH
1008
E
HOH
12
1_555
A
HOH
1014
E
HOH
12
1_555
A
HOH
1017
E
HOH
12
1_555
A
BTB
701
B
BTB
4
1_555
A
HOH
1008
E
HOH
4
1_555
A
HOH
1016
E
HOH
4
1_555
A
HOH
1017
E
HOH
4
1_555
A
ASP
471
A
ASP
39
4
1_555
A
HOH
1018
E
HOH
4
1_555
A
HOH
1019
E
HOH
4
1_555
A
HOH
1020
E
HOH
4
1_555
4
P 1 21 1