0.005925 0.000000 0.000000 0.000000 0.005925 0.000000 0.000000 0.000000 0.005925 0.00000 0.00000 0.00000 Oja, T. Niiranen, L. Sandalova, T. Klika, K.D. Niemi, J. Mantsala, P. Schneider, G. Metsa-Ketela, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 48 90.00 90.00 90.00 168.790 168.790 168.790 C5 H11 O8 P 230.110 RIBULOSE-5-PHOSPHATE saccharide C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C8 H18 N2 O4 S 238.305 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HEPES non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N C N 3 R C N 4 N O N 5 R C N 6 N O N 7 N C N 8 N O N 9 N P N 10 N O N 11 N O N 12 N O N 13 N O N 14 N O N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N N N 27 S C N 28 N C N 29 N O N 30 N C N 31 N O N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N N N 40 S C N 41 N C N 42 N O N 43 N C N 44 N C N 45 N C N 46 N N N 47 N C N 48 N N N 49 N N N 50 N O N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N N N 67 S C N 68 N C N 69 N O N 70 N C N 71 N C N 72 N O N 73 N N N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N N N 84 S C N 85 N C N 86 N O N 87 N C N 88 N C N 89 N O N 90 N O N 91 N O N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N CA N 100 N CL N 101 N N N 102 R C N 103 N C N 104 N O N 105 N C N 106 N S N 107 N O N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 N C N 117 N C N 118 N N N 119 N C N 120 N C N 121 N C N 122 N C N 123 N O N 124 N C N 125 N C N 126 N S N 127 N O N 128 N O N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N N N 149 S C N 150 N C N 151 N O N 152 N C N 153 N C N 154 N C N 155 N O N 156 N N N 157 N O N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 N C N 173 N C N 174 N C N 175 N O N 176 N O N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N N N 188 N C N 189 N C N 190 N O N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C Y 202 N C Y 203 N N Y 204 N C Y 205 N C Y 206 N N N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N O N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 S C N 226 N C N 227 N C N 228 N C N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C N 248 N C N 249 N C N 250 N C N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 N C N 270 N C N 271 N C N 272 N C N 273 N N N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N S N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C N 338 N C N 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C N 355 N O N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N N N 365 S C N 366 N C N 367 N O N 368 R C N 369 N O N 370 N C N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N N Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N doub N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing Y 197 N sing Y 198 N doub Y 199 N doub N 200 N sing Y 201 N sing N 202 N sing Y 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing Y 305 N doub Y 306 N sing Y 307 N sing N 308 N sing Y 309 N doub N 310 N sing Y 311 N doub N 312 N sing Y 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing Y 374 N doub Y 375 N sing Y 376 N sing N 377 N sing Y 378 N doub Y 379 N sing Y 380 N sing N 381 N sing Y 382 N sing Y 383 N doub N 384 N sing Y 385 N doub N 386 N sing Y 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N doub N 407 N sing Y 408 N doub N 409 N sing Y 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 110 1291 1296 10.1073/pnas.1207407110 23297194 Structural basis for C-ribosylation in the alnumycin A biosynthetic pathway. 2013 10.2210/pdb4ex9/pdb pdb_00004ex9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirror CCD 2011-01-01 MARMOSAIC 225 mm CCD Si 111 CHANNEL SINGLE WAVELENGTH M x-ray 1 0.8726 1.0 ID23-2 ESRF 0.8726 SYNCHROTRON ESRF BEAMLINE ID23-2 32948.336 AlnA 1 man polymer 40.078 CALCIUM ION 2 syn non-polymer 230.110 RIBULOSE-5-PHOSPHATE 1 man non-polymer 238.305 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID 1 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 18.015 water 2 nat water no no MAHHHHHHHRSERQPDQLLEVSDEIATALAERRPVVALESSLITTDPSSETASLIEKAVRGAGAVPATIGIAGGKLVVGL TDSLIERFASTKGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTK MTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVTRMDDLHTAARAAEAHWQVNGPGTVLLTSPID EQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAVQAER MAHHHHHHHRSERQPDQLLEVSDEIATALAERRPVVALESSLITTDPSSETASLIEKAVRGAGAVPATIGIAGGKLVVGL TDSLIERFASTKGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTK MTVVSGGAKSILDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVTRMDDLHTAARAAEAHWQVNGPGTVLLTSPID EQDAVDEAIVEAAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAVQAER A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sp. CM020 sample alnA 569580 Streptomyces sp. CM020 562 Escherichia coli TOP10 PLASMID pBADdelHisB 1 3.04 59.55 VAPOR DIFFUSION, HANGING DROP 7.2 20% PEG3000, 0.15M calcium acetate, 0.1M MIB buffer, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K 277.0 audit_author chem_comp_atom chem_comp_bond database_2 struct_conn struct_ref_seq_dif struct_site pdbx_initial_refinement_model repository Initial release Database references Structure summary Data collection Database references Derived calculations Refinement description 1 0 2013-01-16 1 1 2013-02-13 1 2 2018-01-24 1 3 2024-02-28 1 4 2024-04-03 _audit_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-04-30 REL REL CA CALCIUM ION 5RP RIBULOSE-5-PHOSPHATE EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID CL CHLORIDE ION HOH water native AlnA Other experimental model CA 1 2 CA CA 401 A 5RP 1 3 5RP 5RP 402 A CA 1 2 CA CA 403 A EPE 1 4 EPE EPE 404 A CL 1 5 CL CL 405 A HOH 1 6 HOH HOH 501 A HOH 2 6 HOH HOH 502 A n 1 -9 A n 2 -8 A n 3 -7 A n 4 -6 A n 5 -5 A n 6 -4 A n 7 -3 A n 8 -2 A n 9 -1 A n 10 0 A n 11 1 A n 12 2 A n 13 3 A n 14 4 A PRO 5 n 15 PRO 5 A ASP 6 n 16 ASP 6 A GLN 7 n 17 GLN 7 A LEU 8 n 18 LEU 8 A LEU 9 n 19 LEU 9 A GLU 10 n 20 GLU 10 A VAL 11 n 21 VAL 11 A SER 12 n 22 SER 12 A ASP 13 n 23 ASP 13 A GLU 14 n 24 GLU 14 A ILE 15 n 25 ILE 15 A ALA 16 n 26 ALA 16 A THR 17 n 27 THR 17 A ALA 18 n 28 ALA 18 A LEU 19 n 29 LEU 19 A ALA 20 n 30 ALA 20 A GLU 21 n 31 GLU 21 A ARG 22 n 32 ARG 22 A ARG 23 n 33 ARG 23 A PRO 24 n 34 PRO 24 A VAL 25 n 35 VAL 25 A VAL 26 n 36 VAL 26 A ALA 27 n 37 ALA 27 A LEU 28 n 38 LEU 28 A GLU 29 n 39 GLU 29 A SER 30 n 40 SER 30 A SER 31 n 41 SER 31 A LEU 32 n 42 LEU 32 A ILE 33 n 43 ILE 33 A THR 34 n 44 THR 34 A THR 35 n 45 THR 35 A ASP 36 n 46 ASP 36 A PRO 37 n 47 PRO 37 A SER 38 n 48 SER 38 A SER 39 n 49 SER 39 A GLU 40 n 50 GLU 40 A THR 41 n 51 THR 41 A ALA 42 n 52 ALA 42 A SER 43 n 53 SER 43 A LEU 44 n 54 LEU 44 A ILE 45 n 55 ILE 45 A GLU 46 n 56 GLU 46 A LYS 47 n 57 LYS 47 A ALA 48 n 58 ALA 48 A VAL 49 n 59 VAL 49 A ARG 50 n 60 ARG 50 A GLY 51 n 61 GLY 51 A ALA 52 n 62 ALA 52 A GLY 53 n 63 GLY 53 A ALA 54 n 64 ALA 54 A VAL 55 n 65 VAL 55 A PRO 56 n 66 PRO 56 A ALA 57 n 67 ALA 57 A THR 58 n 68 THR 58 A ILE 59 n 69 ILE 59 A GLY 60 n 70 GLY 60 A ILE 61 n 71 ILE 61 A ALA 62 n 72 ALA 62 A GLY 63 n 73 GLY 63 A GLY 64 n 74 GLY 64 A LYS 65 n 75 LYS 65 A LEU 66 n 76 LEU 66 A VAL 67 n 77 VAL 67 A VAL 68 n 78 VAL 68 A GLY 69 n 79 GLY 69 A LEU 70 n 80 LEU 70 A THR 71 n 81 THR 71 A ASP 72 n 82 ASP 72 A SER 73 n 83 SER 73 A LEU 74 n 84 LEU 74 A ILE 75 n 85 ILE 75 A GLU 76 n 86 GLU 76 A ARG 77 n 87 ARG 77 A PHE 78 n 88 PHE 78 A ALA 79 n 89 ALA 79 A SER 80 n 90 SER 80 A THR 81 n 91 THR 81 A LYS 82 n 92 LYS 82 A GLY 83 n 93 GLY 83 A ILE 84 n 94 ILE 84 A PRO 85 n 95 PRO 85 A LYS 86 n 96 LYS 86 A ILE 87 n 97 ILE 87 A SER 88 n 98 SER 88 A ALA 89 n 99 ALA 89 A ARG 90 n 100 ARG 90 A ASP 91 n 101 ASP 91 A ILE 92 n 102 ILE 92 A GLY 93 n 103 GLY 93 A GLY 94 n 104 GLY 94 A ALA 95 n 105 ALA 95 A LEU 96 n 106 LEU 96 A ALA 97 n 107 ALA 97 A GLY 98 n 108 GLY 98 A GLY 99 n 109 GLY 99 A GLY 100 n 110 GLY 100 A LEU 101 n 111 LEU 101 A GLY 102 n 112 GLY 102 A ALA 103 n 113 ALA 103 A THR 104 n 114 THR 104 A THR 105 n 115 THR 105 A VAL 106 n 116 VAL 106 A ALA 107 n 117 ALA 107 A GLY 108 n 118 GLY 108 A THR 109 n 119 THR 109 A ILE 110 n 120 ILE 110 A VAL 111 n 121 VAL 111 A ILE 112 n 122 ILE 112 A ALA 113 n 123 ALA 113 A GLU 114 n 124 GLU 114 A ARG 115 n 125 ARG 115 A ALA 116 n 126 ALA 116 A GLY 117 n 127 GLY 117 A ILE 118 n 128 ILE 118 A GLN 119 n 129 GLN 119 A VAL 120 n 130 VAL 120 A PHE 121 n 131 PHE 121 A THR 122 n 132 THR 122 A THR 123 n 133 THR 123 A ALA 124 n 134 ALA 124 A GLY 125 n 135 GLY 125 A ILE 126 n 136 ILE 126 A GLY 127 n 137 GLY 127 A GLY 128 n 138 GLY 128 A VAL 129 n 139 VAL 129 A HIS 130 n 140 HIS 130 A ARG 131 n 141 ARG 131 A ARG 132 n 142 ARG 132 A GLY 133 n 143 GLY 133 A GLU 134 n 144 GLU 134 A ASP 135 n 145 ASP 135 A THR 136 n 146 THR 136 A LEU 137 n 147 LEU 137 A ASP 138 n 148 ASP 138 A ILE 139 n 149 ILE 139 A SER 140 n 150 SER 140 A PRO 141 n 151 PRO 141 A ASP 142 n 152 ASP 142 A LEU 143 n 153 LEU 143 A LEU 144 n 154 LEU 144 A GLN 145 n 155 GLN 145 A PHE 146 n 156 PHE 146 A ARG 147 n 157 ARG 147 A LYS 148 n 158 LYS 148 A THR 149 n 159 THR 149 A LYS 150 n 160 LYS 150 A MET 151 n 161 MET 151 A THR 152 n 162 THR 152 A VAL 153 n 163 VAL 153 A VAL 154 n 164 VAL 154 A SER 155 n 165 SER 155 A GLY 156 n 166 GLY 156 A GLY 157 n 167 GLY 157 A ALA 158 n 168 ALA 158 A LYS 159 n 169 LYS 159 A SER 160 n 170 SER 160 A ILE 161 n 171 ILE 161 A LEU 162 n 172 LEU 162 A ASP 163 n 173 ASP 163 A HIS 164 n 174 HIS 164 A ARG 165 n 175 ARG 165 A LEU 166 n 176 LEU 166 A THR 167 n 177 THR 167 A ALA 168 n 178 ALA 168 A GLU 169 n 179 GLU 169 A TYR 170 n 180 TYR 170 A LEU 171 n 181 LEU 171 A GLU 172 n 182 GLU 172 A THR 173 n 183 THR 173 A ALA 174 n 184 ALA 174 A GLY 175 n 185 GLY 175 A VAL 176 n 186 VAL 176 A PRO 177 n 187 PRO 177 A VAL 178 n 188 VAL 178 A TYR 179 n 189 TYR 179 A GLY 180 n 190 GLY 180 A TYR 181 n 191 TYR 181 A ARG 182 n 192 ARG 182 A THR 183 n 193 THR 183 A ASP 184 n 194 ASP 184 A LYS 185 n 195 LYS 185 A LEU 186 n 196 LEU 186 A ALA 187 n 197 ALA 187 A ALA 188 n 198 ALA 188 A PHE 189 n 199 PHE 189 A VAL 190 n 200 VAL 190 A VAL 191 n 201 VAL 191 A ARG 192 n 202 ARG 192 A GLU 193 n 203 GLU 193 A ALA 194 n 204 ALA 194 A ASP 195 n 205 ASP 195 A VAL 196 n 206 VAL 196 A PRO 197 n 207 PRO 197 A VAL 198 n 208 VAL 198 A THR 199 n 209 THR 199 A ARG 200 n 210 ARG 200 A MET 201 n 211 MET 201 A ASP 202 n 212 ASP 202 A ASP 203 n 213 ASP 203 A LEU 204 n 214 LEU 204 A HIS 205 n 215 HIS 205 A THR 206 n 216 THR 206 A ALA 207 n 217 ALA 207 A ALA 208 n 218 ALA 208 A ARG 209 n 219 ARG 209 A ALA 210 n 220 ALA 210 A ALA 211 n 221 ALA 211 A GLU 212 n 222 GLU 212 A ALA 213 n 223 ALA 213 A HIS 214 n 224 HIS 214 A TRP 215 n 225 TRP 215 A GLN 216 n 226 GLN 216 A VAL 217 n 227 VAL 217 A ASN 218 n 228 ASN 218 A GLY 219 n 229 GLY 219 A PRO 220 n 230 PRO 220 A GLY 221 n 231 GLY 221 A THR 222 n 232 THR 222 A VAL 223 n 233 VAL 223 A LEU 224 n 234 LEU 224 A LEU 225 n 235 LEU 225 A THR 226 n 236 THR 226 A SER 227 n 237 SER 227 A PRO 228 n 238 PRO 228 A ILE 229 n 239 ILE 229 A ASP 230 n 240 ASP 230 A GLU 231 n 241 GLU 231 A GLN 232 n 242 GLN 232 A ASP 233 n 243 ASP 233 A ALA 234 n 244 ALA 234 A VAL 235 n 245 VAL 235 A ASP 236 n 246 ASP 236 A GLU 237 n 247 GLU 237 A ALA 238 n 248 ALA 238 A ILE 239 n 249 ILE 239 A VAL 240 n 250 VAL 240 A GLU 241 n 251 GLU 241 A ALA 242 n 252 ALA 242 A ALA 243 n 253 ALA 243 A ILE 244 n 254 ILE 244 A ALA 245 n 255 ALA 245 A GLU 246 n 256 GLU 246 A ALA 247 n 257 ALA 247 A LEU 248 n 258 LEU 248 A ALA 249 n 259 ALA 249 A GLN 250 n 260 GLN 250 A CYS 251 n 261 CYS 251 A ASP 252 n 262 ASP 252 A GLN 253 n 263 GLN 253 A GLU 254 n 264 GLU 254 A GLY 255 n 265 GLY 255 A ILE 256 n 266 ILE 256 A VAL 257 n 267 VAL 257 A GLY 258 n 268 GLY 258 A ASN 259 n 269 ASN 259 A ALA 260 n 270 ALA 260 A VAL 261 n 271 VAL 261 A SER 262 n 272 SER 262 A PRO 263 n 273 PRO 263 A TYR 264 n 274 TYR 264 A LEU 265 n 275 LEU 265 A MET 266 n 276 MET 266 A LYS 267 n 277 LYS 267 A ALA 268 n 278 ALA 268 A LEU 269 n 279 LEU 269 A ALA 270 n 280 ALA 270 A ARG 271 n 281 ARG 271 A ALA 272 n 282 ALA 272 A SER 273 n 283 SER 273 A GLY 274 n 284 GLY 274 A GLY 275 n 285 GLY 275 A MET 276 n 286 MET 276 A LEU 277 n 287 LEU 277 A PRO 278 n 288 PRO 278 A LYS 279 n 289 LYS 279 A ALA 280 n 290 ALA 280 A GLY 281 n 291 GLY 281 A ARG 282 n 292 ARG 282 A SER 283 n 293 SER 283 A LEU 284 n 294 LEU 284 A LEU 285 n 295 LEU 285 A LEU 286 n 296 LEU 286 A SER 287 n 297 SER 287 A THR 288 n 298 THR 288 A ALA 289 n 299 ALA 289 A ARG 290 n 300 ARG 290 A VAL 291 n 301 VAL 291 A ALA 292 n 302 ALA 292 A GLY 293 n 303 GLY 293 A GLU 294 n 304 GLU 294 A PHE 295 n 305 PHE 295 A SER 296 n 306 SER 296 A ALA 297 n 307 ALA 297 A ALA 298 n 308 ALA 298 A LEU 299 n 309 LEU 299 A SER 300 n 310 SER 300 A ALA 301 n 311 ALA 301 A VAL 302 n 312 VAL 302 A GLN 303 n 313 GLN 303 A ALA 304 n 314 ALA 304 A GLU 305 n 315 GLU 305 A ARG 306 n 316 ARG 306 A 1.0952 0.3108 -0.0080 1.0518 0.2631 0.4689 0.0141 0.1545 0.0432 -0.1011 0.0073 0.0734 -0.1539 -0.1388 -0.0214 0.0541 0.0484 0.0033 0.0698 0.0179 0.0144 refined -3.0765 21.2806 -4.5472 X-RAY DIFFRACTION A 5 A 306 X-RAY DIFFRACTION 1 author_defined_assembly 3 trimeric A ASP 138 A OD1 ASP 148 1_555 A CA 401 B CA CA 1_555 A HOH 501 G O HOH 1_555 86.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5_555 z,x,y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 9_555 y,z,x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 10 A N GLU 20 A O VAL 68 A O VAL 78 A O VAL 67 A O VAL 77 A N GLY 60 A N GLY 70 A N ILE 61 A N ILE 71 A O GLY 102 A O GLY 112 A O ALA 103 A O ALA 113 A N ILE 87 A N ILE 97 A N GLU 10 A N GLU 20 A O VAL 68 A O VAL 78 A O VAL 67 A O VAL 77 A N GLY 60 A N GLY 70 A O ALA 57 A O ALA 67 A N LEU 28 A N LEU 38 A N ALA 27 A N ALA 37 A O VAL 120 A O VAL 130 A N PHE 121 A N PHE 131 A O VAL 154 A O VAL 164 A N MET 151 A N MET 161 A O VAL 223 A O VAL 233 A O THR 226 A O THR 236 A N TYR 179 A N TYR 189 A N GLY 180 A N GLY 190 A O THR 199 A O THR 209 A N LEU 186 A N LEU 196 A O VAL 196 A O VAL 206 1 A CA 403 D CA 1 A CG ARG 306 A CG ARG 316 1 Y 1 A CD ARG 306 A CD ARG 316 1 Y 1 A NE ARG 306 A NE ARG 316 1 Y 1 A CZ ARG 306 A CZ ARG 316 1 Y 1 A NH1 ARG 306 A NH1 ARG 316 1 Y 1 A NH2 ARG 306 A NH2 ARG 316 1 Y 1 A MET -9 A MET 1 1 Y 1 A ALA -8 A ALA 2 1 Y 1 A HIS -7 A HIS 3 1 Y 1 A HIS -6 A HIS 4 1 Y 1 A HIS -5 A HIS 5 1 Y 1 A HIS -4 A HIS 6 1 Y 1 A HIS -3 A HIS 7 1 Y 1 A HIS -2 A HIS 8 1 Y 1 A HIS -1 A HIS 9 1 Y 1 A ARG 0 A ARG 10 1 Y 1 A SER 1 A SER 11 1 Y 1 A GLU 2 A GLU 12 1 Y 1 A ARG 3 A ARG 13 1 Y 1 A GLN 4 A GLN 14 1 Y 1 A ARG 182 57.82 16.00 1 A ALA 188 -105.52 53.93 1 A PHE 189 64.08 -119.57 76.601 0.929 0.900 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.24838 0.21950 0.22084 3.15 50.00 353 7036 4.8 99.91 43.876 0.346 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.446 0.80 0.80 1.20 native AlnA MAXIMUM LIKELIHOOD MASK 3.15 50.00 2 2211 32 0 2177 0.004 0.019 2231 0.000 0.020 18 0.873 1.993 3032 0.217 3.000 42 4.130 5.000 301 32.594 23.846 78 13.579 15.000 358 9.918 15.000 17 0.051 0.200 374 0.002 0.021 1626 0.244 0.302 3.232 24 442 20 100.00 70.0 3.15 50.00 4EX9 7414 0.154 1 10.1 7.7 100.0 0.807 3.15 3.32 2.5 1056 1 7.9 100.0 0.059 9.96 50.00 24.4 276 1 6.4 99.0 data collection DNA phasing MOLREP refinement REFMAC 5.6.0117 data reduction MOSFLM data scaling SCALA Crystal structure of the prealnumycin C-glycosynthase AlnA in complex with ribulose 5-phosphate 1 N N 2 N N 3 N N 2 N N 4 N N 5 N N 6 N N A SER 12 A SER 22 HELX_P A GLU 21 A GLU 31 1 1 10 A SER 30 A SER 40 HELX_P A ASP 36 A ASP 46 1 2 7 A SER 38 A SER 48 HELX_P A GLY 51 A GLY 61 1 3 14 A THR 71 A THR 81 HELX_P A THR 81 A THR 91 1 4 11 A SER 88 A SER 98 HELX_P A ARG 90 A ARG 100 5 5 3 A ASP 91 A ASP 101 HELX_P A GLY 99 A GLY 109 1 6 9 A THR 105 A THR 115 HELX_P A GLY 117 A GLY 127 1 7 13 A ARG 132 A ARG 142 HELX_P A LEU 137 A LEU 147 1 8 6 A PRO 141 A PRO 151 HELX_P A THR 149 A THR 159 1 9 9 A ASP 163 A ASP 173 HELX_P A ALA 174 A ALA 184 1 10 12 A ASP 203 A ASP 213 HELX_P A GLY 219 A GLY 229 1 11 17 A ASP 230 A ASP 240 HELX_P A ALA 234 A ALA 244 5 12 5 A ASP 236 A ASP 246 HELX_P A GLY 255 A GLY 265 1 13 20 A ALA 260 A ALA 270 HELX_P A SER 273 A SER 283 1 14 14 A MET 276 A MET 286 HELX_P A ALA 304 A ALA 314 1 15 29 metalc 2.448 A ASP 135 A OD1 ASP 145 1_555 A CA 403 D CA CA 1_555 metalc 2.336 A ASP 138 A OD1 ASP 148 1_555 A CA 401 B CA CA 1_555 metalc 2.767 A CA 401 B CA CA 1_555 A HOH 501 G O HOH 1_555 LIGASE alpha/beta/alpha-domain, C-glycosynthase, ribose 5-phosphate binding, divalent metal ion binding, LIGASE B6SEG5_9ACTO UNP 1 2 B6SEG5 ERQPDQLLEVSDEIATALAERRPVVALESSLITTDPSSETASLIEKAVRGAGAVPATIGIAGGKLVVGLTDSLIERFAST KGIPKISARDIGGALAGGGLGATTVAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSI LDHRLTAEYLETAGVPVYGYRTDKLAAFVVREADVPVTRMDDLHTAARAAEAHWQVNGPGTVLLTSPIDEQDAVDEAIVE AAIAEALAQCDQEGIVGNAVSPYLMKALARASGGMLPKAGRSLLLSTARVAGEFSAALSAVQAER 2 306 4EX9 2 306 B6SEG5 A 1 12 316 1 expression tag MET -9 4EX9 A B6SEG5 UNP 1 1 expression tag ALA -8 4EX9 A B6SEG5 UNP 2 1 expression tag HIS -7 4EX9 A B6SEG5 UNP 3 1 expression tag HIS -6 4EX9 A B6SEG5 UNP 4 1 expression tag HIS -5 4EX9 A B6SEG5 UNP 5 1 expression tag HIS -4 4EX9 A B6SEG5 UNP 6 1 expression tag HIS -3 4EX9 A B6SEG5 UNP 7 1 expression tag HIS -2 4EX9 A B6SEG5 UNP 8 1 expression tag HIS -1 4EX9 A B6SEG5 UNP 9 1 expression tag ARG 0 4EX9 A B6SEG5 UNP 10 1 expression tag SER 1 4EX9 A B6SEG5 UNP 11 5 9 2 parallel anti-parallel anti-parallel parallel parallel anti-parallel parallel parallel parallel parallel parallel parallel anti-parallel A LEU 9 A LEU 19 A VAL 11 A VAL 21 A LYS 65 A LYS 75 A VAL 68 A VAL 78 A VAL 55 A VAL 65 A ALA 62 A ALA 72 A LEU 101 A LEU 111 A THR 104 A THR 114 A LYS 86 A LYS 96 A ILE 87 A ILE 97 A LEU 9 A LEU 19 A VAL 11 A VAL 21 A LYS 65 A LYS 75 A VAL 68 A VAL 78 A VAL 55 A VAL 65 A ALA 62 A ALA 72 A VAL 25 A VAL 35 A GLU 29 A GLU 39 A VAL 120 A VAL 130 A THR 122 A THR 132 A MET 151 A MET 161 A SER 155 A SER 165 A THR 222 A THR 232 A THR 226 A THR 236 A VAL 178 A VAL 188 A TYR 181 A TYR 191 A THR 199 A THR 209 A MET 201 A MET 211 A LYS 185 A LYS 195 A ALA 188 A ALA 198 A VAL 191 A VAL 201 A PRO 197 A PRO 207 BINDING SITE FOR RESIDUE CA A 401 A CA 401 Software 5 BINDING SITE FOR RESIDUE 5RP A 402 A 5RP 402 Software 9 BINDING SITE FOR RESIDUE CA A 403 A CA 403 Software 3 BINDING SITE FOR RESIDUE EPE A 404 A EPE 404 Software 3 BINDING SITE FOR RESIDUE CL A 405 A CL 405 Software 1 A ASP 138 A ASP 148 5 1_555 A GLU 169 A GLU 179 5 9_555 A GLU 172 A GLU 182 5 9_555 A ASN 259 A ASN 269 5 1_555 A HOH 501 G HOH 5 1_555 A GLU 29 A GLU 39 9 1_555 A THR 105 A THR 115 9 1_555 A VAL 106 A VAL 116 9 1_555 A HIS 130 A HIS 140 9 1_555 A SER 140 A SER 150 9 1_555 A PRO 141 A PRO 151 9 1_555 A ASP 142 A ASP 152 9 1_555 A LYS 159 A LYS 169 9 1_555 A HOH 502 G HOH 9 1_555 A ASP 135 A ASP 145 3 1_555 A ASP 135 A ASP 145 3 5_555 A ASP 135 A ASP 145 3 9_555 A ARG 147 A ARG 157 3 9_555 A ARG 147 A ARG 157 3 1_555 A ARG 147 A ARG 157 3 5_555 A LYS 86 A LYS 96 1 1_555 214 I 41 3 2