0.009758 0.000000 0.000000 0.000000 0.009758 0.000000 0.000000 0.000000 0.016670 0.000000 0.000000 0.000000 Chopra, R. Xu, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 102.478 102.478 59.987 C28 H27 N7 O 477.560 {5-[4-(dimethylamino)piperidin-1-yl]-1H-imidazo[4,5-b]pyridin-2-yl}[2-(isoquinolin-4-yl)pyridin-4-yl]methanone non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N C N 3 N C N 4 N O Y 5 N C Y 6 N C Y 7 N C N 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C Y 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N C Y 22 N C N 23 N N N 24 N C N 25 N C N 26 N N N 27 N C N 28 N C Y 29 N C Y 30 N C Y 31 N C Y 32 N N Y 33 N N Y 34 N N Y 35 N N Y 36 N N N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N N N 65 S C N 66 N C N 67 N O N 68 N C N 69 N O N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N N N 78 S C N 79 N C N 80 N O N 81 N C N 82 N C N 83 N C N 84 N N N 85 N C N 86 N N N 87 N N N 88 N O N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N N N 105 S C N 106 N C N 107 N O N 108 N C N 109 N C N 110 N O N 111 N N N 112 N O N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N N N 122 S C N 123 N C N 124 N O N 125 N C N 126 N C N 127 N O N 128 N O N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 R C N 139 N C N 140 N O N 141 N C N 142 N S N 143 N O N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C N 156 N C N 157 N C N 158 N O N 159 N N N 160 N O N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N N N 172 S C N 173 N C N 174 N O N 175 N C N 176 N C N 177 N C N 178 N O N 179 N O N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N N N 191 N C N 192 N C N 193 N O N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C Y 205 N C Y 206 N N Y 207 N C Y 208 N C Y 209 N N N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 S C N 226 N C N 227 N C N 228 N C N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C N 248 N C N 249 N C N 250 N C N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 N C N 270 N C N 271 N C N 272 N C N 273 N N N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N S N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C N 338 N C N 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C N 355 N O N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N N N 365 S C N 366 N C N 367 N O N 368 R C N 369 N O N 370 N C N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N N Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N doub Y 5 N doub Y 6 N sing Y 7 N sing Y 8 N sing N 9 N sing Y 10 N doub Y 11 N doub Y 12 N sing Y 13 N doub Y 14 N sing Y 15 N doub Y 16 N sing Y 17 N doub Y 18 N sing N 19 N sing N 20 N sing N 21 N doub Y 22 N sing Y 23 N sing Y 24 N doub Y 25 N doub Y 26 N sing Y 27 N sing Y 28 N sing Y 29 N doub Y 30 N doub Y 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N doub N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing Y 208 N sing Y 209 N doub Y 210 N doub N 211 N sing Y 212 N sing N 213 N sing Y 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing Y 314 N doub Y 315 N sing Y 316 N sing N 317 N sing Y 318 N doub N 319 N sing Y 320 N doub N 321 N sing Y 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N doub N 379 N sing N 380 N sing N 381 N sing N 382 N sing Y 383 N doub Y 384 N sing Y 385 N sing N 386 N sing Y 387 N doub Y 388 N sing Y 389 N sing N 390 N sing Y 391 N sing Y 392 N doub N 393 N sing Y 394 N doub N 395 N sing Y 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N doub N 407 N sing N 408 N sing N 409 N sing N 410 N sing Y 411 N doub Y 412 N sing Y 413 N sing N 414 N sing Y 415 N doub N 416 N sing Y 417 N doub N 418 N sing Y 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N doub N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing US ACS Med Chem Lett 1948-5875 3 445 449 10.1021/ml200241a 24900493 Fragment-Based Discovery of 7-Azabenzimidazoles as Potent, Highly Selective, and Orally Active CDK4/6 Inhibitors. 2012 10.2210/pdb4ez5/pdb pdb_00004ez5 1 CCD MAR CCD 165 mm SINGLE WAVELENGTH M x-ray 1 1 1.0 37 0 37 -26 22 0 8618 2.700 19.625 8618 X10SA SLS 1 SYNCHROTRON SLS BEAMLINE X10SA 35019.215 Cyclin-dependent kinase 6 2.7.11.22 UNP residues 1-301 1 man polymer 477.560 {5-[4-(dimethylamino)piperidin-1-yl]-1H-imidazo[4,5-b]pyridin-2-yl}[2-(isoquinolin-4-yl)pyridin-4-yl]methanone 1 syn non-polymer Cell division protein kinase 6, Serine/threonine-protein kinase PLSTIRE no no MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQHHHHHH MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample CDK6, CDKN6 9606 Homo sapiens 562 Escherichia coli 1 2.25 45.30 VAPOR DIFFUSION, HANGING DROP 6 0.1M MES pH 6.0, 12% PEG-3350, 0.1M NH4NO3, EVAPORATION, temperature 298K, VAPOR DIFFUSION, HANGING DROP 298 exptl_crystal_grow chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Database references Experimental preparation Data collection Database references Derived calculations Refinement description 1 0 2013-02-06 1 1 2014-09-24 1 2 2018-01-24 1 3 2023-09-13 _exptl_crystal_grow.pdbx_details _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-05-02 REL REL 0RS {5-[4-(dimethylamino)piperidin-1-yl]-1H-imidazo[4,5-b]pyridin-2-yl}[2-(isoquinolin-4-yl)pyridin-4-yl]methanone 3NUP PDB experimental model 0RS 900 2 0RS 0RS 900 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A GLN 11 n 11 GLN 11 A GLN 12 n 12 GLN 12 A TYR 13 n 13 TYR 13 A GLU 14 n 14 GLU 14 A CYS 15 n 15 CYS 15 A VAL 16 n 16 VAL 16 A ALA 17 n 17 ALA 17 A GLU 18 n 18 GLU 18 A ILE 19 n 19 ILE 19 A GLY 20 n 20 GLY 20 A GLU 21 n 21 GLU 21 A GLY 22 n 22 GLY 22 A ALA 23 n 23 ALA 23 A n 24 24 A GLY 25 n 25 GLY 25 A LYS 26 n 26 LYS 26 A VAL 27 n 27 VAL 27 A PHE 28 n 28 PHE 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A ARG 31 n 31 ARG 31 A ASP 32 n 32 ASP 32 A LEU 33 n 33 LEU 33 A LYS 34 n 34 LYS 34 A ASN 35 n 35 ASN 35 A GLY 36 n 36 GLY 36 A GLY 37 n 37 GLY 37 A ARG 38 n 38 ARG 38 A PHE 39 n 39 PHE 39 A VAL 40 n 40 VAL 40 A ALA 41 n 41 ALA 41 A LEU 42 n 42 LEU 42 A LYS 43 n 43 LYS 43 A ARG 44 n 44 ARG 44 A VAL 45 n 45 VAL 45 A n 46 46 A n 47 47 A n 48 48 A n 49 49 A n 50 50 A n 51 51 A n 52 52 A n 53 53 A n 54 54 A PRO 55 n 55 PRO 55 A LEU 56 n 56 LEU 56 A SER 57 n 57 SER 57 A THR 58 n 58 THR 58 A ILE 59 n 59 ILE 59 A ARG 60 n 60 ARG 60 A GLU 61 n 61 GLU 61 A VAL 62 n 62 VAL 62 A ALA 63 n 63 ALA 63 A VAL 64 n 64 VAL 64 A LEU 65 n 65 LEU 65 A ARG 66 n 66 ARG 66 A HIS 67 n 67 HIS 67 A LEU 68 n 68 LEU 68 A GLU 69 n 69 GLU 69 A THR 70 n 70 THR 70 A PHE 71 n 71 PHE 71 A GLU 72 n 72 GLU 72 A HIS 73 n 73 HIS 73 A PRO 74 n 74 PRO 74 A ASN 75 n 75 ASN 75 A VAL 76 n 76 VAL 76 A VAL 77 n 77 VAL 77 A ARG 78 n 78 ARG 78 A LEU 79 n 79 LEU 79 A PHE 80 n 80 PHE 80 A ASP 81 n 81 ASP 81 A VAL 82 n 82 VAL 82 A CYS 83 n 83 CYS 83 A THR 84 n 84 THR 84 A n 85 85 A n 86 86 A n 87 87 A n 88 88 A n 89 89 A n 90 90 A n 91 91 A n 92 92 A LYS 93 n 93 LYS 93 A LEU 94 n 94 LEU 94 A THR 95 n 95 THR 95 A LEU 96 n 96 LEU 96 A VAL 97 n 97 VAL 97 A PHE 98 n 98 PHE 98 A GLU 99 n 99 GLU 99 A HIS 100 n 100 HIS 100 A VAL 101 n 101 VAL 101 A ASP 102 n 102 ASP 102 A GLN 103 n 103 GLN 103 A ASP 104 n 104 ASP 104 A LEU 105 n 105 LEU 105 A THR 106 n 106 THR 106 A THR 107 n 107 THR 107 A TYR 108 n 108 TYR 108 A LEU 109 n 109 LEU 109 A ASP 110 n 110 ASP 110 A LYS 111 n 111 LYS 111 A VAL 112 n 112 VAL 112 A PRO 113 n 113 PRO 113 A GLU 114 n 114 GLU 114 A PRO 115 n 115 PRO 115 A GLY 116 n 116 GLY 116 A VAL 117 n 117 VAL 117 A PRO 118 n 118 PRO 118 A THR 119 n 119 THR 119 A GLU 120 n 120 GLU 120 A THR 121 n 121 THR 121 A ILE 122 n 122 ILE 122 A LYS 123 n 123 LYS 123 A ASP 124 n 124 ASP 124 A MET 125 n 125 MET 125 A MET 126 n 126 MET 126 A PHE 127 n 127 PHE 127 A GLN 128 n 128 GLN 128 A LEU 129 n 129 LEU 129 A LEU 130 n 130 LEU 130 A ARG 131 n 131 ARG 131 A GLY 132 n 132 GLY 132 A LEU 133 n 133 LEU 133 A ASP 134 n 134 ASP 134 A PHE 135 n 135 PHE 135 A LEU 136 n 136 LEU 136 A HIS 137 n 137 HIS 137 A SER 138 n 138 SER 138 A HIS 139 n 139 HIS 139 A ARG 140 n 140 ARG 140 A VAL 141 n 141 VAL 141 A VAL 142 n 142 VAL 142 A HIS 143 n 143 HIS 143 A ARG 144 n 144 ARG 144 A ASP 145 n 145 ASP 145 A LEU 146 n 146 LEU 146 A LYS 147 n 147 LYS 147 A PRO 148 n 148 PRO 148 A GLN 149 n 149 GLN 149 A ASN 150 n 150 ASN 150 A ILE 151 n 151 ILE 151 A LEU 152 n 152 LEU 152 A VAL 153 n 153 VAL 153 A THR 154 n 154 THR 154 A SER 155 n 155 SER 155 A SER 156 n 156 SER 156 A GLY 157 n 157 GLY 157 A GLN 158 n 158 GLN 158 A ILE 159 n 159 ILE 159 A LYS 160 n 160 LYS 160 A LEU 161 n 161 LEU 161 A ALA 162 n 162 ALA 162 A ASP 163 n 163 ASP 163 A PHE 164 n 164 PHE 164 A GLY 165 n 165 GLY 165 A LEU 166 n 166 LEU 166 A ALA 167 n 167 ALA 167 A n 168 168 A n 169 169 A n 170 170 A n 171 171 A n 172 172 A n 173 173 A n 174 174 A n 175 175 A n 176 176 A n 177 177 A n 178 178 A n 179 179 A n 180 180 A VAL 181 n 181 VAL 181 A THR 182 n 182 THR 182 A LEU 183 n 183 LEU 183 A TRP 184 n 184 TRP 184 A TYR 185 n 185 TYR 185 A ARG 186 n 186 ARG 186 A ALA 187 n 187 ALA 187 A PRO 188 n 188 PRO 188 A GLU 189 n 189 GLU 189 A VAL 190 n 190 VAL 190 A LEU 191 n 191 LEU 191 A LEU 192 n 192 LEU 192 A GLN 193 n 193 GLN 193 A SER 194 n 194 SER 194 A SER 195 n 195 SER 195 A TYR 196 n 196 TYR 196 A ALA 197 n 197 ALA 197 A THR 198 n 198 THR 198 A PRO 199 n 199 PRO 199 A VAL 200 n 200 VAL 200 A ASP 201 n 201 ASP 201 A LEU 202 n 202 LEU 202 A TRP 203 n 203 TRP 203 A SER 204 n 204 SER 204 A VAL 205 n 205 VAL 205 A GLY 206 n 206 GLY 206 A CYS 207 n 207 CYS 207 A ILE 208 n 208 ILE 208 A PHE 209 n 209 PHE 209 A ALA 210 n 210 ALA 210 A GLU 211 n 211 GLU 211 A MET 212 n 212 MET 212 A PHE 213 n 213 PHE 213 A ARG 214 n 214 ARG 214 A ARG 215 n 215 ARG 215 A LYS 216 n 216 LYS 216 A PRO 217 n 217 PRO 217 A LEU 218 n 218 LEU 218 A PHE 219 n 219 PHE 219 A ARG 220 n 220 ARG 220 A GLY 221 n 221 GLY 221 A SER 222 n 222 SER 222 A SER 223 n 223 SER 223 A ASP 224 n 224 ASP 224 A VAL 225 n 225 VAL 225 A ASP 226 n 226 ASP 226 A GLN 227 n 227 GLN 227 A LEU 228 n 228 LEU 228 A GLY 229 n 229 GLY 229 A LYS 230 n 230 LYS 230 A ILE 231 n 231 ILE 231 A LEU 232 n 232 LEU 232 A ASP 233 n 233 ASP 233 A VAL 234 n 234 VAL 234 A ILE 235 n 235 ILE 235 A GLY 236 n 236 GLY 236 A LEU 237 n 237 LEU 237 A PRO 238 n 238 PRO 238 A GLY 239 n 239 GLY 239 A GLU 240 n 240 GLU 240 A GLU 241 n 241 GLU 241 A ASP 242 n 242 ASP 242 A TRP 243 n 243 TRP 243 A PRO 244 n 244 PRO 244 A ARG 245 n 245 ARG 245 A ASP 246 n 246 ASP 246 A VAL 247 n 247 VAL 247 A ALA 248 n 248 ALA 248 A LEU 249 n 249 LEU 249 A PRO 250 n 250 PRO 250 A ARG 251 n 251 ARG 251 A GLN 252 n 252 GLN 252 A ALA 253 n 253 ALA 253 A PHE 254 n 254 PHE 254 A HIS 255 n 255 HIS 255 A n 256 256 A n 257 257 A SER 258 n 258 SER 258 A ALA 259 n 259 ALA 259 A GLN 260 n 260 GLN 260 A PRO 261 n 261 PRO 261 A ILE 262 n 262 ILE 262 A GLU 263 n 263 GLU 263 A LYS 264 n 264 LYS 264 A PHE 265 n 265 PHE 265 A VAL 266 n 266 VAL 266 A THR 267 n 267 THR 267 A ASP 268 n 268 ASP 268 A ILE 269 n 269 ILE 269 A ASP 270 n 270 ASP 270 A GLU 271 n 271 GLU 271 A LEU 272 n 272 LEU 272 A GLY 273 n 273 GLY 273 A LYS 274 n 274 LYS 274 A ASP 275 n 275 ASP 275 A LEU 276 n 276 LEU 276 A LEU 277 n 277 LEU 277 A LEU 278 n 278 LEU 278 A LYS 279 n 279 LYS 279 A CYS 280 n 280 CYS 280 A LEU 281 n 281 LEU 281 A THR 282 n 282 THR 282 A PHE 283 n 283 PHE 283 A ASN 284 n 284 ASN 284 A PRO 285 n 285 PRO 285 A ALA 286 n 286 ALA 286 A LYS 287 n 287 LYS 287 A ARG 288 n 288 ARG 288 A ILE 289 n 289 ILE 289 A SER 290 n 290 SER 290 A ALA 291 n 291 ALA 291 A TYR 292 n 292 TYR 292 A SER 293 n 293 SER 293 A ALA 294 n 294 ALA 294 A LEU 295 n 295 LEU 295 A SER 296 n 296 SER 296 A HIS 297 n 297 HIS 297 A PRO 298 n 298 PRO 298 A TYR 299 n 299 TYR 299 A PHE 300 n 300 PHE 300 A GLN 301 n 301 GLN 301 A n 302 302 A n 303 303 A n 304 304 A n 305 305 A n 306 306 A n 307 307 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 16 A N VAL 16 A O LYS 29 A O LYS 29 A N PHE 28 A N PHE 28 A O LEU 42 A O LEU 42 A N LYS 43 A N LYS 43 A O LEU 96 A O LEU 96 A O THR 95 A O THR 95 A N CYS 83 A N CYS 83 A N GLN 103 A N GLN 103 A O VAL 153 A O VAL 153 A N LEU 152 A N LEU 152 A O LYS 160 A O LYS 160 1 A MET 1 A MET 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 A LYS 3 A LYS 3 1 Y 1 A ASP 4 A ASP 4 1 Y 1 A GLY 5 A GLY 5 1 Y 1 A LEU 6 A LEU 6 1 Y 1 A CYS 7 A CYS 7 1 Y 1 A ARG 8 A ARG 8 1 Y 1 A ALA 9 A ALA 9 1 Y 1 A ASP 10 A ASP 10 1 Y 1 A TYR 24 A TYR 24 1 Y 1 A ARG 46 A ARG 46 1 Y 1 A VAL 47 A VAL 47 1 Y 1 A GLN 48 A GLN 48 1 Y 1 A THR 49 A THR 49 1 Y 1 A GLY 50 A GLY 50 1 Y 1 A GLU 51 A GLU 51 1 Y 1 A GLU 52 A GLU 52 1 Y 1 A GLY 53 A GLY 53 1 Y 1 A MET 54 A MET 54 1 Y 1 A VAL 85 A VAL 85 1 Y 1 A SER 86 A SER 86 1 Y 1 A ARG 87 A ARG 87 1 Y 1 A THR 88 A THR 88 1 Y 1 A ASP 89 A ASP 89 1 Y 1 A ARG 90 A ARG 90 1 Y 1 A GLU 91 A GLU 91 1 Y 1 A THR 92 A THR 92 1 Y 1 A ARG 168 A ARG 168 1 Y 1 A ILE 169 A ILE 169 1 Y 1 A TYR 170 A TYR 170 1 Y 1 A SER 171 A SER 171 1 Y 1 A PHE 172 A PHE 172 1 Y 1 A GLN 173 A GLN 173 1 Y 1 A MET 174 A MET 174 1 Y 1 A ALA 175 A ALA 175 1 Y 1 A LEU 176 A LEU 176 1 Y 1 A THR 177 A THR 177 1 Y 1 A SER 178 A SER 178 1 Y 1 A VAL 179 A VAL 179 1 Y 1 A VAL 180 A VAL 180 1 Y 1 A SER 256 A SER 256 1 Y 1 A LYS 257 A LYS 257 1 Y 1 A HIS 302 A HIS 302 1 Y 1 A HIS 303 A HIS 303 1 Y 1 A HIS 304 A HIS 304 1 Y 1 A HIS 305 A HIS 305 1 Y 1 A HIS 306 A HIS 306 1 Y 1 A HIS 307 A HIS 307 1 Y 1 A GLU 72 35.80 64.14 1 A PRO 115 -95.85 39.50 1 A ARG 144 81.36 -19.68 1 A SER 155 -28.03 -40.88 1 A SER 194 -133.50 -49.95 1 A ALA 197 -77.02 -166.67 1 A ARG 215 59.85 1.55 1 A ASP 268 92.41 -18.57 1 A PHE 300 -97.41 47.66 156.460 93.8221 61.600 10.1464 0.0000 -0.0000 10.1464 -0.0000 -20.2929 0.2870 0.2162 0.2196 2.7000 19.6250 408 8616 4.7400 99.9100 1.000 1.000 0.7125 0.5600 RANDOM 1 1.380 MOLECULAR REPLACEMENT 34.3600 0.9800 1.2000 3NUP ML FLAT BULK SOLVENT MODEL 62.0750 0.3190 2.7000 19.6250 0 2098 36 0 2062 0.006 2148 0.948 2909 0.061 326 0.005 367 14.314 790 0.4080 0.3360 3.0900 133 2698 2831 3 100.0000 0.3367 0.2186 3.8880 146 2718 2864 3 100.0000 0.2529 0.1997 19.6259 129 2792 2921 3 100.0000 2.7 20 4EZ5 8618 8618 0 0 0.086 1 9.8 7.46 100 data scaling Jim W. Pflugrath Jim.Pflugrath@Rigaku.com Jun 25 2008 http://www.rigaku.com/software/dtrek.html d*TREK package 9.9.3L data reduction Jim W. Pflugrath Jim.Pflugrath@Rigaku.com http://www.rigaku.com/software/dtrek.html d*TREK package refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.7.3_928 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 CDK6 (monomeric) in complex with inhibitor 1 N N 2 N N A LYS 34 A LYS 34 HELX_P A GLY 36 A GLY 36 5 1 3 A LEU 56 A LEU 56 HELX_P A PHE 71 A PHE 71 1 2 16 A LEU 105 A LEU 105 HELX_P A LYS 111 A LYS 111 1 3 7 A PRO 118 A PRO 118 HELX_P A HIS 139 A HIS 139 1 4 22 A ALA 187 A ALA 187 HELX_P A GLN 193 A GLN 193 1 5 7 A PRO 199 A PRO 199 HELX_P A ARG 215 A ARG 215 1 6 17 A SER 223 A SER 223 HELX_P A GLY 236 A GLY 236 1 7 14 A GLY 239 A GLY 239 HELX_P A TRP 243 A TRP 243 5 8 5 A PRO 250 A PRO 250 HELX_P A PHE 254 A PHE 254 5 9 5 A ASP 270 A ASP 270 HELX_P A LEU 281 A LEU 281 1 10 12 A SER 290 A SER 290 HELX_P A LEU 295 A LEU 295 1 11 6 A HIS 297 A HIS 297 HELX_P A GLN 301 A GLN 301 5 12 5 TRANSFERASE/TRANSFERASE INHIBITOR Protein Kinase, ATP Binding, TRANSFERASE-TRANSFERASE INHIBITOR complex A GLU 114 A GLU 114 1 A PRO 115 A PRO 115 -2.19 CDK6_HUMAN UNP 1 1 Q00534 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 1 301 4EZ5 1 301 Q00534 A 1 1 301 1 expression tag HIS 302 4EZ5 A Q00534 UNP 302 1 expression tag HIS 303 4EZ5 A Q00534 UNP 303 1 expression tag HIS 304 4EZ5 A Q00534 UNP 304 1 expression tag HIS 305 4EZ5 A Q00534 UNP 305 1 expression tag HIS 306 4EZ5 A Q00534 UNP 306 1 expression tag HIS 307 4EZ5 A Q00534 UNP 307 5 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 13 A TYR 13 A GLU 21 A GLU 21 A LYS 26 A LYS 26 A ASP 32 A ASP 32 A PHE 39 A PHE 39 A ARG 44 A ARG 44 A THR 95 A THR 95 A GLU 99 A GLU 99 A LEU 79 A LEU 79 A CYS 83 A CYS 83 A GLN 103 A GLN 103 A ASP 104 A ASP 104 A ILE 151 A ILE 151 A VAL 153 A VAL 153 A ILE 159 A ILE 159 A LEU 161 A LEU 161 BINDING SITE FOR RESIDUE 0RS A 900 A 0RS 900 Software 16 A ILE 19 A ILE 19 16 1_555 A VAL 27 A VAL 27 16 1_555 A LYS 43 A LYS 43 16 1_555 A VAL 77 A VAL 77 16 1_555 A PHE 98 A PHE 98 16 1_555 A GLU 99 A GLU 99 16 1_555 A HIS 100 A HIS 100 16 1_555 A VAL 101 A VAL 101 16 1_555 A ASP 102 A ASP 102 16 1_555 A ASP 104 A ASP 104 16 1_555 A THR 107 A THR 107 16 1_555 A GLN 149 A GLN 149 16 1_555 A ASN 150 A ASN 150 16 1_555 A LEU 152 A LEU 152 16 1_555 A ALA 162 A ALA 162 16 1_555 A ASP 163 A ASP 163 16 1_555 79 I 4 X, Y, Z -Y, X, Z -X, -Y, Z Y, -X, Z X+1/2, Y+1/2, Z+1/2 -Y+1/2, X+1/2, Z+1/2 -X+1/2, -Y+1/2, Z+1/2 Y+1/2, -X+1/2, Z+1/2