0.010347 0.000000 0.000000 0.000000 0.008692 0.000000 0.000000 0.000000 0.025403 0.00000 0.00000 0.00000 Zahn, M. Straeter, N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 96.645 115.047 39.366 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N C N 340 N C N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing To be Published 0353 Structural studies of DnaK in complex with proline rich antimicrobial peptides reveal two different peptide binding modes 10.2210/pdb4ezu/pdb pdb_00004ezu 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2010-10-19 MARMOSAIC 225 mm CCD Si - 111 SINGLE WAVELENGTH M x-ray 1 0.91841 1.0 14.2 BESSY 0.91841 SYNCHROTRON BESSY BEAMLINE 14.2 23820.777 Chaperone protein DnaK UNP residues 389-607 1 man polymer 2040.453 Proline rich bombesin-related protein UNP residues 46-60 1 syn polymer 18.015 water 80 nat water HSP70, Heat shock 70 kDa protein, Heat shock protein 70 no no VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA A polypeptide(L) no no EKKPPRPPQWAVGHFMM EKKPPRPPQWAVGHFMM B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K12 sample b0014, dnaK, groP, grpF, JW0013, seg 83333 Escherichia coli 562 Escherichia coli 1 2.11 41.64 VAPOR DIFFUSION, HANGING DROP 8.0 3.0 M ammonium sulfate, 0.1 M HEPES pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K 292 software chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif repository Initial release Refinement description Data collection Database references 1 0 2013-04-24 1 1 2017-11-15 1 2 2024-02-28 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2012-05-03 REL REL HOH water This sequence occurs naturally in Bombina maxima. C-terminus is amidated. 161274 Chinese red belly toad Bombina maxima sample HOH 1 3 HOH HOH 701 A HOH 2 3 HOH HOH 702 A HOH 3 3 HOH HOH 703 A HOH 4 3 HOH HOH 704 A HOH 5 3 HOH HOH 705 A HOH 6 3 HOH HOH 706 A HOH 7 3 HOH HOH 707 A HOH 8 3 HOH HOH 708 A HOH 9 3 HOH HOH 709 A HOH 10 3 HOH HOH 710 A HOH 11 3 HOH HOH 711 A HOH 12 3 HOH HOH 712 A HOH 13 3 HOH HOH 713 A HOH 14 3 HOH HOH 714 A HOH 15 3 HOH HOH 715 A HOH 16 3 HOH HOH 716 A HOH 18 3 HOH HOH 717 A HOH 19 3 HOH HOH 718 A HOH 20 3 HOH HOH 719 A HOH 21 3 HOH HOH 720 A HOH 22 3 HOH HOH 721 A HOH 23 3 HOH HOH 722 A HOH 24 3 HOH HOH 723 A HOH 25 3 HOH HOH 724 A HOH 26 3 HOH HOH 725 A HOH 27 3 HOH HOH 726 A HOH 28 3 HOH HOH 727 A HOH 29 3 HOH HOH 728 A HOH 30 3 HOH HOH 729 A HOH 31 3 HOH HOH 730 A HOH 32 3 HOH HOH 731 A HOH 33 3 HOH HOH 732 A HOH 34 3 HOH HOH 733 A HOH 35 3 HOH HOH 734 A HOH 36 3 HOH HOH 735 A HOH 37 3 HOH HOH 736 A HOH 38 3 HOH HOH 737 A HOH 39 3 HOH HOH 738 A HOH 40 3 HOH HOH 739 A HOH 41 3 HOH HOH 740 A HOH 42 3 HOH HOH 741 A HOH 43 3 HOH HOH 742 A HOH 44 3 HOH HOH 743 A HOH 45 3 HOH HOH 744 A HOH 46 3 HOH HOH 745 A HOH 47 3 HOH HOH 746 A HOH 48 3 HOH HOH 747 A HOH 49 3 HOH HOH 748 A HOH 50 3 HOH HOH 749 A HOH 51 3 HOH HOH 750 A HOH 52 3 HOH HOH 751 A HOH 54 3 HOH HOH 752 A HOH 55 3 HOH HOH 753 A HOH 56 3 HOH HOH 754 A HOH 57 3 HOH HOH 755 A HOH 58 3 HOH HOH 756 A HOH 59 3 HOH HOH 757 A HOH 60 3 HOH HOH 758 A HOH 61 3 HOH HOH 759 A HOH 62 3 HOH HOH 760 A HOH 63 3 HOH HOH 761 A HOH 64 3 HOH HOH 762 A HOH 65 3 HOH HOH 763 A HOH 66 3 HOH HOH 764 A HOH 67 3 HOH HOH 765 A HOH 68 3 HOH HOH 766 A HOH 69 3 HOH HOH 767 A HOH 70 3 HOH HOH 768 A HOH 71 3 HOH HOH 769 A HOH 72 3 HOH HOH 770 A HOH 73 3 HOH HOH 771 A HOH 74 3 HOH HOH 772 A HOH 75 3 HOH HOH 773 A HOH 76 3 HOH HOH 774 A HOH 77 3 HOH HOH 775 A HOH 78 3 HOH HOH 776 A HOH 79 3 HOH HOH 777 A HOH 80 3 HOH HOH 778 A HOH 17 3 HOH HOH 101 B HOH 53 3 HOH HOH 102 B VAL 389 n 1 VAL 389 A LEU 390 n 2 LEU 390 A LEU 391 n 3 LEU 391 A LEU 392 n 4 LEU 392 A ASP 393 n 5 ASP 393 A VAL 394 n 6 VAL 394 A THR 395 n 7 THR 395 A PRO 396 n 8 PRO 396 A LEU 397 n 9 LEU 397 A SER 398 n 10 SER 398 A LEU 399 n 11 LEU 399 A GLY 400 n 12 GLY 400 A ILE 401 n 13 ILE 401 A GLU 402 n 14 GLU 402 A THR 403 n 15 THR 403 A MET 404 n 16 MET 404 A GLY 405 n 17 GLY 405 A GLY 406 n 18 GLY 406 A VAL 407 n 19 VAL 407 A MET 408 n 20 MET 408 A THR 409 n 21 THR 409 A THR 410 n 22 THR 410 A LEU 411 n 23 LEU 411 A ILE 412 n 24 ILE 412 A ALA 413 n 25 ALA 413 A LYS 414 n 26 LYS 414 A ASN 415 n 27 ASN 415 A THR 416 n 28 THR 416 A THR 417 n 29 THR 417 A ILE 418 n 30 ILE 418 A PRO 419 n 31 PRO 419 A THR 420 n 32 THR 420 A LYS 421 n 33 LYS 421 A HIS 422 n 34 HIS 422 A SER 423 n 35 SER 423 A GLN 424 n 36 GLN 424 A VAL 425 n 37 VAL 425 A PHE 426 n 38 PHE 426 A SER 427 n 39 SER 427 A THR 428 n 40 THR 428 A ALA 429 n 41 ALA 429 A GLU 430 n 42 GLU 430 A ASP 431 n 43 ASP 431 A ASN 432 n 44 ASN 432 A GLN 433 n 45 GLN 433 A SER 434 n 46 SER 434 A ALA 435 n 47 ALA 435 A VAL 436 n 48 VAL 436 A THR 437 n 49 THR 437 A ILE 438 n 50 ILE 438 A HIS 439 n 51 HIS 439 A VAL 440 n 52 VAL 440 A LEU 441 n 53 LEU 441 A GLN 442 n 54 GLN 442 A GLY 443 n 55 GLY 443 A GLU 444 n 56 GLU 444 A ARG 445 n 57 ARG 445 A LYS 446 n 58 LYS 446 A ARG 447 n 59 ARG 447 A ALA 448 n 60 ALA 448 A ALA 449 n 61 ALA 449 A ASP 450 n 62 ASP 450 A ASN 451 n 63 ASN 451 A LYS 452 n 64 LYS 452 A SER 453 n 65 SER 453 A LEU 454 n 66 LEU 454 A GLY 455 n 67 GLY 455 A GLN 456 n 68 GLN 456 A PHE 457 n 69 PHE 457 A ASN 458 n 70 ASN 458 A LEU 459 n 71 LEU 459 A ASP 460 n 72 ASP 460 A GLY 461 n 73 GLY 461 A ILE 462 n 74 ILE 462 A ASN 463 n 75 ASN 463 A PRO 464 n 76 PRO 464 A ALA 465 n 77 ALA 465 A PRO 466 n 78 PRO 466 A ARG 467 n 79 ARG 467 A GLY 468 n 80 GLY 468 A MET 469 n 81 MET 469 A PRO 470 n 82 PRO 470 A GLN 471 n 83 GLN 471 A ILE 472 n 84 ILE 472 A GLU 473 n 85 GLU 473 A VAL 474 n 86 VAL 474 A THR 475 n 87 THR 475 A PHE 476 n 88 PHE 476 A ASP 477 n 89 ASP 477 A ILE 478 n 90 ILE 478 A ASP 479 n 91 ASP 479 A ALA 480 n 92 ALA 480 A ASP 481 n 93 ASP 481 A GLY 482 n 94 GLY 482 A ILE 483 n 95 ILE 483 A LEU 484 n 96 LEU 484 A HIS 485 n 97 HIS 485 A VAL 486 n 98 VAL 486 A SER 487 n 99 SER 487 A ALA 488 n 100 ALA 488 A LYS 489 n 101 LYS 489 A ASP 490 n 102 ASP 490 A LYS 491 n 103 LYS 491 A ASN 492 n 104 ASN 492 A SER 493 n 105 SER 493 A GLY 494 n 106 GLY 494 A LYS 495 n 107 LYS 495 A GLU 496 n 108 GLU 496 A GLN 497 n 109 GLN 497 A LYS 498 n 110 LYS 498 A ILE 499 n 111 ILE 499 A THR 500 n 112 THR 500 A ILE 501 n 113 ILE 501 A LYS 502 n 114 LYS 502 A ALA 503 n 115 ALA 503 A SER 504 n 116 SER 504 A SER 505 n 117 SER 505 A GLY 506 n 118 GLY 506 A LEU 507 n 119 LEU 507 A ASN 508 n 120 ASN 508 A GLU 509 n 121 GLU 509 A ASP 510 n 122 ASP 510 A GLU 511 n 123 GLU 511 A ILE 512 n 124 ILE 512 A GLN 513 n 125 GLN 513 A LYS 514 n 126 LYS 514 A MET 515 n 127 MET 515 A VAL 516 n 128 VAL 516 A ARG 517 n 129 ARG 517 A ASP 518 n 130 ASP 518 A ALA 519 n 131 ALA 519 A GLU 520 n 132 GLU 520 A ALA 521 n 133 ALA 521 A ASN 522 n 134 ASN 522 A ALA 523 n 135 ALA 523 A GLU 524 n 136 GLU 524 A ALA 525 n 137 ALA 525 A ASP 526 n 138 ASP 526 A ARG 527 n 139 ARG 527 A LYS 528 n 140 LYS 528 A PHE 529 n 141 PHE 529 A GLU 530 n 142 GLU 530 A GLU 531 n 143 GLU 531 A LEU 532 n 144 LEU 532 A VAL 533 n 145 VAL 533 A GLN 534 n 146 GLN 534 A THR 535 n 147 THR 535 A ARG 536 n 148 ARG 536 A ASN 537 n 149 ASN 537 A GLN 538 n 150 GLN 538 A GLY 539 n 151 GLY 539 A ASP 540 n 152 ASP 540 A HIS 541 n 153 HIS 541 A LEU 542 n 154 LEU 542 A LEU 543 n 155 LEU 543 A HIS 544 n 156 HIS 544 A SER 545 n 157 SER 545 A THR 546 n 158 THR 546 A ARG 547 n 159 ARG 547 A LYS 548 n 160 LYS 548 A GLN 549 n 161 GLN 549 A VAL 550 n 162 VAL 550 A GLU 551 n 163 GLU 551 A GLU 552 n 164 GLU 552 A ALA 553 n 165 ALA 553 A GLY 554 n 166 GLY 554 A ASP 555 n 167 ASP 555 A LYS 556 n 168 LYS 556 A LEU 557 n 169 LEU 557 A PRO 558 n 170 PRO 558 A ALA 559 n 171 ALA 559 A ASP 560 n 172 ASP 560 A ASP 561 n 173 ASP 561 A LYS 562 n 174 LYS 562 A THR 563 n 175 THR 563 A ALA 564 n 176 ALA 564 A ILE 565 n 177 ILE 565 A GLU 566 n 178 GLU 566 A SER 567 n 179 SER 567 A ALA 568 n 180 ALA 568 A LEU 569 n 181 LEU 569 A THR 570 n 182 THR 570 A ALA 571 n 183 ALA 571 A LEU 572 n 184 LEU 572 A GLU 573 n 185 GLU 573 A THR 574 n 186 THR 574 A ALA 575 n 187 ALA 575 A LEU 576 n 188 LEU 576 A LYS 577 n 189 LYS 577 A GLY 578 n 190 GLY 578 A GLU 579 n 191 GLU 579 A ASP 580 n 192 ASP 580 A LYS 581 n 193 LYS 581 A ALA 582 n 194 ALA 582 A ALA 583 n 195 ALA 583 A ILE 584 n 196 ILE 584 A GLU 585 n 197 GLU 585 A ALA 586 n 198 ALA 586 A LYS 587 n 199 LYS 587 A MET 588 n 200 MET 588 A GLN 589 n 201 GLN 589 A GLU 590 n 202 GLU 590 A LEU 591 n 203 LEU 591 A ALA 592 n 204 ALA 592 A GLN 593 n 205 GLN 593 A VAL 594 n 206 VAL 594 A SER 595 n 207 SER 595 A GLN 596 n 208 GLN 596 A LYS 597 n 209 LYS 597 A LEU 598 n 210 LEU 598 A MET 599 n 211 MET 599 A GLU 600 n 212 GLU 600 A ILE 601 n 213 ILE 601 A ALA 602 n 214 ALA 602 A GLN 603 n 215 GLN 603 A GLN 604 n 216 GLN 604 A n 217 605 A n 218 606 A n 219 607 A n 1 1 B n 2 2 B n 3 3 B PRO 4 n 4 PRO 4 B PRO 5 n 5 PRO 5 B ARG 6 n 6 ARG 6 B PRO 7 n 7 PRO 7 B PRO 8 n 8 PRO 8 B GLN 9 n 9 GLN 9 B TRP 10 n 10 TRP 10 B ALA 11 n 11 ALA 11 B VAL 12 n 12 VAL 12 B GLY 13 n 13 GLY 13 B HIS 14 n 14 HIS 14 B PHE 15 n 15 PHE 15 B MET 16 n 16 MET 16 B MET 17 n 17 MET 17 B 0.6729 1.5744 0.9985 4.0040 1.8062 2.4099 -0.0039 0.0424 -0.0111 -0.0035 0.0599 -0.0227 0.0523 0.0763 -0.0559 0.1502 0.0189 -0.0059 0.1860 -0.0079 0.1382 refined 62.5408 103.7951 38.1547 X-RAY DIFFRACTION 0.9589 -0.0549 0.5582 2.4311 -0.3189 1.1538 0.0533 0.0803 -0.2467 -0.2343 0.0744 -0.1019 0.1070 0.0036 -0.1277 0.1538 0.0321 -0.0097 0.1397 -0.0041 0.1227 refined 63.3594 90.5099 33.9227 X-RAY DIFFRACTION 2.3472 0.5126 -0.1734 5.4959 -1.1431 0.8878 -0.0905 0.2373 0.0056 -0.0420 0.0325 0.0366 -0.0826 0.1262 0.0580 0.1634 0.0280 0.0172 0.1474 -0.0274 0.0505 refined 61.3453 101.1881 30.3181 X-RAY DIFFRACTION 3.6556 2.8366 0.6523 11.3781 -1.1225 2.3661 0.2292 -0.0191 -0.2265 0.0480 -0.1052 -0.4346 0.3095 0.0573 -0.1240 0.1396 -0.0122 -0.0935 0.0862 -0.0163 0.1698 refined 42.8047 74.7923 29.5546 X-RAY DIFFRACTION 5.0030 -1.6968 0.4264 3.8476 -3.3948 4.9932 0.2401 0.1685 -0.1690 -0.2762 0.0904 0.2326 0.3009 -0.0659 -0.3306 0.1583 -0.0766 -0.1393 0.1134 0.0183 0.1798 refined 37.8018 77.1077 27.5935 X-RAY DIFFRACTION A 389 A 423 X-RAY DIFFRACTION 1 A 424 A 488 X-RAY DIFFRACTION 2 A 489 A 529 X-RAY DIFFRACTION 3 A 530 A 564 X-RAY DIFFRACTION 4 A 565 A 604 X-RAY DIFFRACTION 5 software_defined_assembly PISA 8 octameric software_defined_assembly PISA 4 tetrameric software_defined_assembly PISA 4 tetrameric author_and_software_defined_assembly PISA 2 dimeric 16620 -108 39810 6310 -41 21900 5140 -36 23070 1620 -12 12480 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_675 -x+1,-y+2,z crystal symmetry operation 96.6450000000 230.0940000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_657 -x+1,y,-z+2 crystal symmetry operation 96.6450000000 0.0000000000 78.7320000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_577 x,-y+2,-z+2 crystal symmetry operation 0.0000000000 230.0940000000 78.7320000000 A O ILE 412 A O ILE 24 A N LEU 399 A N LEU 11 A N GLY 400 A N GLY 12 A O LEU 441 A O LEU 53 A N ILE 438 A N ILE 50 A O PHE 457 A O PHE 69 A O ILE 501 A O ILE 113 A N LEU 484 A N LEU 96 A O HIS 485 A O HIS 97 A N ASP 477 A N ASP 89 A O ILE 478 A O ILE 90 A N THR 420 A N THR 32 A N SER 427 A N SER 39 B O GLY 13 B O GLY 13 1 B CA MET 17 B CA MET 17 1 Y 1 B C MET 17 B C MET 17 1 Y 1 B O MET 17 B O MET 17 1 Y 1 B CB MET 17 B CB MET 17 1 Y 1 B CG MET 17 B CG MET 17 1 Y 1 B SD MET 17 B SD MET 17 1 Y 1 B CE MET 17 B CE MET 17 1 Y 1 A GLN 605 A GLN 217 1 Y 1 A HIS 606 A HIS 218 1 Y 1 A ALA 607 A ALA 219 1 Y 1 B GLU 1 B GLU 1 1 Y 1 B LYS 2 B LYS 2 1 Y 1 B LYS 3 B LYS 3 1 Y 1 5.51 0.90 118.30 123.81 A A A CB CG OD1 ASP ASP ASP 490 490 490 N 1 A A CD OE2 GLU GLU 402 402 -0.069 0.011 1.252 1.183 N 1 A A CG CD2 HIS HIS 541 541 0.057 0.009 1.354 1.411 N 1 B B CE2 CD2 TRP TRP 10 10 0.075 0.012 1.409 1.484 N 1 A PHE 426 -118.92 -169.95 1 A ASP 460 -110.48 -168.55 1 A ARG 467 -38.96 135.63 35.847 -0.88 0.00 0.00 -2.14 0.00 3.02 0.948 0.916 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.27582 0.21776 0.22064 1.90 25.00 901 16807 5.1 99.57 9.730 0.145 RANDOM 1 THROUGHOUT PDB ID 1DKZ 0.187 0.177 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 1.90 25.00 80 1829 0 0 1749 0.017 0.020 1795 1.931 1.966 2429 5.227 5.000 235 42.028 26.463 82 16.106 15.000 338 16.033 15.000 8 0.129 0.200 283 0.010 0.021 1335 0.383 0.272 1.949 55 1136 20 99.92 1.9 25.00 4EZU 17741 0.062 1 99.8 0.558 1.9 2.0 1 5.3 100.0 data collection MAR345 refinement REFMAC with PDBID 1DKZ data reduction XDS data scaling SCALA phasing REFMAC with PDBID 1DKZ Crystal structure of the substrate binding domain of E.coli DnaK in complex with PR-bombesin in space group I222 1 N N 2 N N 3 N N 3 N N A ARG 447 A ARG 59 HELX_P A ASN 451 A ASN 63 5 1 5 A ASN 508 A ASN 120 HELX_P A ASN 522 A ASN 134 1 2 15 A ASN 522 A ASN 134 HELX_P A GLY 554 A GLY 166 1 3 33 A ASP 555 A ASP 167 HELX_P A LEU 557 A LEU 169 5 4 3 A PRO 558 A PRO 170 HELX_P A GLY 578 A GLY 190 1 5 21 A ASP 580 A ASP 192 HELX_P A SER 595 A SER 207 1 6 16 A SER 595 A SER 207 HELX_P A GLN 604 A GLN 216 1 7 10 CHAPERONE/PEPTIDE BINDING PROTEIN chaperone, peptide binding, CHAPERONE-PEPTIDE BINDING PROTEIN complex A ILE 418 A ILE 30 1 A PRO 419 A PRO 31 2.79 DNAK_ECOLI UNP 1 389 P0A6Y8 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA Q8QFP2_BOMMX UNP 2 46 Q8QFP2 KKPPRPPQWAVGHFM 389 607 4EZU 389 607 P0A6Y8 A 1 1 219 46 60 4EZU 2 16 Q8QFP2 B 2 2 16 2 expression tag GLU 1 4EZU B Q8QFP2 UNP 1 2 expression tag MET 17 4EZU B Q8QFP2 UNP 17 4 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 407 A VAL 19 A ILE 412 A ILE 24 A LEU 399 A LEU 11 A THR 403 A THR 15 A VAL 436 A VAL 48 A GLN 442 A GLN 54 A LYS 452 A LYS 64 A LEU 459 A LEU 71 A GLU 496 A GLU 108 A ILE 501 A ILE 113 A LEU 484 A LEU 96 A ASP 490 A ASP 102 A ILE 472 A ILE 84 A ILE 478 A ILE 90 A THR 420 A THR 32 A THR 428 A THR 40 B VAL 12 B VAL 12 B GLY 13 B GLY 13 23 I 2 2 2