0.009085 0.000000 0.000000 0.000000 0.009085 0.000000 0.000000 0.000000 0.012074 0.00000 0.00000 0.00000 Janda, C.Y. Waghray, D. Levin, A.M. Thomas, C. Garcia, K.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 110.070 110.070 82.820 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H12 O6 180.156 beta-D-mannopyranose D-saccharide, beta linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O5 164.156 alpha-L-fucopyranose L-saccharide, alpha linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose D-saccharide, alpha linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C16 H30 O2 254.408 PALMITOLEIC ACID non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Science SCIEAS 0038 0036-8075 337 59 64 10.1126/science.1222879 22653731 Structural basis of Wnt recognition by Frizzled. 2012 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2012-01-08 PSI PILATUS 6M Si(111) SINGLE WAVELENGTH M x-ray 1 1.03325 1.0 BL11-1 SSRL 1.03325 SYNCHROTRON SSRL BEAMLINE BL11-1 15061.343 Frizzled-8 cysteine-rich domain, UNP residues 28-150 1 man polymer 35185.945 Protein Wnt-8 UNP residues 23-338 1 man polymer 424.401 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 748.682 alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 732.682 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 254.408 PALMITOLEIC ACID 1 syn non-polymer 65.409 ZINC ION 3 syn non-polymer Fz-8, mFz8 XWnt-8 no no ASAKELACQEITVPLCKGIGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPLPPC RSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDAAALEVLFQ ASAKELACQEITVPLCKGIGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPLPPC RSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDAAALEVLFQ A polypeptide(L) no no AWSVNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLT RNCSMGDFDNCGCDDSRNGRIGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCK CHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLK NISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA AWSVNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLT RNCSMGDFDNCGCDDSRNGRIGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCK CHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLK NISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n mouse Fruit fly sample Fzd8 10090 Mus musculus S2 7227 Drosophila melanogaster clawed frog,common platanna,platanna Fruit fly sample wnt8 8355 Xenopus laevis S2 7227 Drosophila melanogaster 1 4.99 75.36 VAPOR DIFFUSION, SITTING DROP 4.5 4-10 % (w/v) PEG 400 15-25 mM Zinc acetate 100 mM Sodium acetate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms struct_asym struct_conn struct_ref_seq_dif struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Database references Derived calculations Non-polymer description Non-polymer description Advisory Atomic model Data collection Database references Derived calculations Structure summary 1 0 2012-06-13 1 1 2012-07-18 1 2 2013-09-25 1 3 2013-10-09 2 0 2020-07-29 _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_entity_id _chem_comp.name _chem_comp.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _pdbx_unobs_or_zero_occ_atoms.label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details A NAG 200 n C NAG 1 A NAG 201 n C NAG 2 B NAG 401 n D NAG 1 B NAG 402 n D NAG 2 B BMA 403 n D BMA 3 B MAN 404 n D MAN 4 B NAG 405 n E NAG 1 B NAG 406 n E NAG 2 B BMA 407 n E BMA 3 B FUC 408 n E FUC 4 DManpb b-D-mannopyranose b-D-Manp Man LFucpa a-L-fucopyranose a-L-Fucp Fuc DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc crystal structure of the cysteine-rich domain of mouse Frizzled 8 HELIX DETERMINATION METHOD: AUTHOR DETERMINED RCSB Y RCSB 2012-05-03 REL REL oligosaccharide oligosaccharide oligosaccharide DGlcpNAcb1-4DGlcpNAcb1- 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1 3 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 3 PDB-CARE LINUCS DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 4 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1 4 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}} 4 PDB-CARE LINUCS DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1- 5 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1a_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1 5 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}[(6+1)][a-L-Fucp]{}}} 5 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 3 O1 HO4 sing C1 O4 NAG NAG 2 1 4 O1 HO4 sing C1 O4 BMA NAG 3 2 4 O1 HO4 sing C1 O3 MAN BMA 4 3 4 O1 HO3 sing C1 O4 NAG NAG 2 1 5 O1 HO4 sing C1 O4 BMA NAG 3 2 5 O1 HO4 sing C1 O6 FUC NAG 4 1 5 O1 HO6 sing n n n n n n n n n n PAM PALMITOLEIC ACID ZN ZINC ION PAM 409 6 PAM PAM 409 B ZN 410 7 ZN ZN 410 B ZN 411 7 ZN ZN 411 B ZN 412 7 ZN ZN 412 B n 1 28 A n 2 29 A n 3 30 A n 4 31 A n 5 32 A n 6 33 A n 7 34 A CYS 35 n 8 CYS 35 A GLN 36 n 9 GLN 36 A GLU 37 n 10 GLU 37 A ILE 38 n 11 ILE 38 A THR 39 n 12 THR 39 A VAL 40 n 13 VAL 40 A PRO 41 n 14 PRO 41 A LEU 42 n 15 LEU 42 A CYS 43 n 16 CYS 43 A LYS 44 n 17 LYS 44 A GLY 45 n 18 GLY 45 A ILE 46 n 19 ILE 46 A GLY 47 n 20 GLY 47 A TYR 48 n 21 TYR 48 A ASN 49 n 22 ASN 49 A TYR 50 n 23 TYR 50 A THR 51 n 24 THR 51 A TYR 52 n 25 TYR 52 A MET 53 n 26 MET 53 A PRO 54 n 27 PRO 54 A ASN 55 n 28 ASN 55 A GLN 56 n 29 GLN 56 A PHE 57 n 30 PHE 57 A ASN 58 n 31 ASN 58 A HIS 59 n 32 HIS 59 A ASP 60 n 33 ASP 60 A THR 61 n 34 THR 61 A GLN 62 n 35 GLN 62 A ASP 63 n 36 ASP 63 A GLU 64 n 37 GLU 64 A ALA 65 n 38 ALA 65 A GLY 66 n 39 GLY 66 A LEU 67 n 40 LEU 67 A GLU 68 n 41 GLU 68 A VAL 69 n 42 VAL 69 A HIS 70 n 43 HIS 70 A GLN 71 n 44 GLN 71 A PHE 72 n 45 PHE 72 A TRP 73 n 46 TRP 73 A PRO 74 n 47 PRO 74 A LEU 75 n 48 LEU 75 A VAL 76 n 49 VAL 76 A GLU 77 n 50 GLU 77 A ILE 78 n 51 ILE 78 A GLN 79 n 52 GLN 79 A CYS 80 n 53 CYS 80 A SER 81 n 54 SER 81 A PRO 82 n 55 PRO 82 A ASP 83 n 56 ASP 83 A LEU 84 n 57 LEU 84 A LYS 85 n 58 LYS 85 A PHE 86 n 59 PHE 86 A PHE 87 n 60 PHE 87 A LEU 88 n 61 LEU 88 A CYS 89 n 62 CYS 89 A SER 90 n 63 SER 90 A MET 91 n 64 MET 91 A TYR 92 n 65 TYR 92 A THR 93 n 66 THR 93 A PRO 94 n 67 PRO 94 A ILE 95 n 68 ILE 95 A CYS 96 n 69 CYS 96 A LEU 97 n 70 LEU 97 A GLU 98 n 71 GLU 98 A ASP 99 n 72 ASP 99 A TYR 100 n 73 TYR 100 A LYS 101 n 74 LYS 101 A LYS 102 n 75 LYS 102 A PRO 103 n 76 PRO 103 A LEU 104 n 77 LEU 104 A PRO 105 n 78 PRO 105 A PRO 106 n 79 PRO 106 A CYS 107 n 80 CYS 107 A ARG 108 n 81 ARG 108 A SER 109 n 82 SER 109 A VAL 110 n 83 VAL 110 A CYS 111 n 84 CYS 111 A GLU 112 n 85 GLU 112 A ARG 113 n 86 ARG 113 A ALA 114 n 87 ALA 114 A LYS 115 n 88 LYS 115 A ALA 116 n 89 ALA 116 A GLY 117 n 90 GLY 117 A CYS 118 n 91 CYS 118 A ALA 119 n 92 ALA 119 A PRO 120 n 93 PRO 120 A LEU 121 n 94 LEU 121 A MET 122 n 95 MET 122 A ARG 123 n 96 ARG 123 A GLN 124 n 97 GLN 124 A TYR 125 n 98 TYR 125 A GLY 126 n 99 GLY 126 A PHE 127 n 100 PHE 127 A ALA 128 n 101 ALA 128 A TRP 129 n 102 TRP 129 A PRO 130 n 103 PRO 130 A ASP 131 n 104 ASP 131 A ARG 132 n 105 ARG 132 A MET 133 n 106 MET 133 A ARG 134 n 107 ARG 134 A CYS 135 n 108 CYS 135 A ASP 136 n 109 ASP 136 A ARG 137 n 110 ARG 137 A LEU 138 n 111 LEU 138 A PRO 139 n 112 PRO 139 A GLU 140 n 113 GLU 140 A GLN 141 n 114 GLN 141 A GLY 142 n 115 GLY 142 A ASN 143 n 116 ASN 143 A PRO 144 n 117 PRO 144 A ASP 145 n 118 ASP 145 A THR 146 n 119 THR 146 A LEU 147 n 120 LEU 147 A CYS 148 n 121 CYS 148 A MET 149 n 122 MET 149 A ASP 150 n 123 ASP 150 A ALA 151 n 124 ALA 151 A ALA 152 n 125 ALA 152 A n 126 153 A n 127 154 A n 128 155 A n 129 156 A n 130 157 A n 131 158 A n 132 159 A n 1 23 B n 2 24 B n 3 25 B n 4 26 B n 5 27 B n 6 28 B n 7 29 B n 8 30 B n 9 31 B THR 32 n 10 THR 32 B GLY 33 n 11 GLY 33 B PRO 34 n 12 PRO 34 B LYS 35 n 13 LYS 35 B ALA 36 n 14 ALA 36 B TYR 37 n 15 TYR 37 B LEU 38 n 16 LEU 38 B THR 39 n 17 THR 39 B TYR 40 n 18 TYR 40 B SER 41 n 19 SER 41 B ALA 42 n 20 ALA 42 B SER 43 n 21 SER 43 B VAL 44 n 22 VAL 44 B ALA 45 n 23 ALA 45 B VAL 46 n 24 VAL 46 B GLY 47 n 25 GLY 47 B ALA 48 n 26 ALA 48 B GLN 49 n 27 GLN 49 B ASN 50 n 28 ASN 50 B GLY 51 n 29 GLY 51 B ILE 52 n 30 ILE 52 B GLU 53 n 31 GLU 53 B GLU 54 n 32 GLU 54 B CYS 55 n 33 CYS 55 B LYS 56 n 34 LYS 56 B TYR 57 n 35 TYR 57 B GLN 58 n 36 GLN 58 B PHE 59 n 37 PHE 59 B ALA 60 n 38 ALA 60 B TRP 61 n 39 TRP 61 B GLU 62 n 40 GLU 62 B ARG 63 n 41 ARG 63 B TRP 64 n 42 TRP 64 B ASN 65 n 43 ASN 65 B CYS 66 n 44 CYS 66 B PRO 67 n 45 PRO 67 B GLU 68 n 46 GLU 68 B SER 69 n 47 SER 69 B THR 70 n 48 THR 70 B LEU 71 n 49 LEU 71 B GLN 72 n 50 GLN 72 B LEU 73 n 51 LEU 73 B ALA 74 n 52 ALA 74 B THR 75 n 53 THR 75 B HIS 76 n 54 HIS 76 B ASN 77 n 55 ASN 77 B GLY 78 n 56 GLY 78 B LEU 79 n 57 LEU 79 B ARG 80 n 58 ARG 80 B SER 81 n 59 SER 81 B ALA 82 n 60 ALA 82 B THR 83 n 61 THR 83 B ARG 84 n 62 ARG 84 B GLU 85 n 63 GLU 85 B THR 86 n 64 THR 86 B SER 87 n 65 SER 87 B PHE 88 n 66 PHE 88 B VAL 89 n 67 VAL 89 B HIS 90 n 68 HIS 90 B ALA 91 n 69 ALA 91 B ILE 92 n 70 ILE 92 B SER 93 n 71 SER 93 B SER 94 n 72 SER 94 B ALA 95 n 73 ALA 95 B GLY 96 n 74 GLY 96 B VAL 97 n 75 VAL 97 B MET 98 n 76 MET 98 B TYR 99 n 77 TYR 99 B THR 100 n 78 THR 100 B LEU 101 n 79 LEU 101 B THR 102 n 80 THR 102 B ARG 103 n 81 ARG 103 B ASN 104 n 82 ASN 104 B CYS 105 n 83 CYS 105 B SER 106 n 84 SER 106 B MET 107 n 85 MET 107 B GLY 108 n 86 GLY 108 B ASP 109 n 87 ASP 109 B PHE 110 n 88 PHE 110 B ASP 111 n 89 ASP 111 B ASN 112 n 90 ASN 112 B CYS 113 n 91 CYS 113 B GLY 114 n 92 GLY 114 B CYS 115 n 93 CYS 115 B ASP 116 n 94 ASP 116 B ASP 117 n 95 ASP 117 B SER 118 n 96 SER 118 B ARG 119 n 97 ARG 119 B ASN 120 n 98 ASN 120 B GLY 121 n 99 GLY 121 B ARG 122 n 100 ARG 122 B ILE 123 n 101 ILE 123 B GLY 124 n 102 GLY 124 B GLY 125 n 103 GLY 125 B ARG 126 n 104 ARG 126 B GLY 127 n 105 GLY 127 B TRP 128 n 106 TRP 128 B VAL 129 n 107 VAL 129 B TRP 130 n 108 TRP 130 B GLY 131 n 109 GLY 131 B GLY 132 n 110 GLY 132 B CYS 133 n 111 CYS 133 B SER 134 n 112 SER 134 B ASP 135 n 113 ASP 135 B ASN 136 n 114 ASN 136 B ALA 137 n 115 ALA 137 B GLU 138 n 116 GLU 138 B PHE 139 n 117 PHE 139 B GLY 140 n 118 GLY 140 B GLU 141 n 119 GLU 141 B ARG 142 n 120 ARG 142 B ILE 143 n 121 ILE 143 B SER 144 n 122 SER 144 B LYS 145 n 123 LYS 145 B LEU 146 n 124 LEU 146 B PHE 147 n 125 PHE 147 B VAL 148 n 126 VAL 148 B ASP 149 n 127 ASP 149 B GLY 150 n 128 GLY 150 B LEU 151 n 129 LEU 151 B GLU 152 n 130 GLU 152 B THR 153 n 131 THR 153 B GLY 154 n 132 GLY 154 B GLN 155 n 133 GLN 155 B ASP 156 n 134 ASP 156 B ALA 157 n 135 ALA 157 B ARG 158 n 136 ARG 158 B ALA 159 n 137 ALA 159 B LEU 160 n 138 LEU 160 B MET 161 n 139 MET 161 B ASN 162 n 140 ASN 162 B LEU 163 n 141 LEU 163 B HIS 164 n 142 HIS 164 B ASN 165 n 143 ASN 165 B ASN 166 n 144 ASN 166 B GLU 167 n 145 GLU 167 B ALA 168 n 146 ALA 168 B GLY 169 n 147 GLY 169 B ARG 170 n 148 ARG 170 B LEU 171 n 149 LEU 171 B ALA 172 n 150 ALA 172 B VAL 173 n 151 VAL 173 B LYS 174 n 152 LYS 174 B GLU 175 n 153 GLU 175 B THR 176 n 154 THR 176 B MET 177 n 155 MET 177 B LYS 178 n 156 LYS 178 B ARG 179 n 157 ARG 179 B THR 180 n 158 THR 180 B CYS 181 n 159 CYS 181 B LYS 182 n 160 LYS 182 B CYS 183 n 161 CYS 183 B HIS 184 n 162 HIS 184 B GLY 185 n 163 GLY 185 B ILE 186 n 164 ILE 186 B SER 187 n 165 SER 187 B GLY 188 n 166 GLY 188 B SER 189 n 167 SER 189 B CYS 190 n 168 CYS 190 B SER 191 n 169 SER 191 B ILE 192 n 170 ILE 192 B GLN 193 n 171 GLN 193 B THR 194 n 172 THR 194 B CYS 195 n 173 CYS 195 B TRP 196 n 174 TRP 196 B LEU 197 n 175 LEU 197 B GLN 198 n 176 GLN 198 B LEU 199 n 177 LEU 199 B ALA 200 n 178 ALA 200 B GLU 201 n 179 GLU 201 B PHE 202 n 180 PHE 202 B ARG 203 n 181 ARG 203 B ASP 204 n 182 ASP 204 B ILE 205 n 183 ILE 205 B GLY 206 n 184 GLY 206 B ASN 207 n 185 ASN 207 B HIS 208 n 186 HIS 208 B LEU 209 n 187 LEU 209 B LYS 210 n 188 LYS 210 B ILE 211 n 189 ILE 211 B LYS 212 n 190 LYS 212 B HIS 213 n 191 HIS 213 B ASP 214 n 192 ASP 214 B GLN 215 n 193 GLN 215 B ALA 216 n 194 ALA 216 B LEU 217 n 195 LEU 217 B LYS 218 n 196 LYS 218 B LEU 219 n 197 LEU 219 B GLU 220 n 198 GLU 220 B MET 221 n 199 MET 221 B n 200 222 B n 201 223 B n 202 224 B n 203 225 B n 204 226 B n 205 227 B n 206 228 B n 207 229 B n 208 230 B n 209 231 B n 210 232 B n 211 233 B n 212 234 B ARG 235 n 213 ARG 235 B GLY 236 n 214 GLY 236 B ALA 237 n 215 ALA 237 B ILE 238 n 216 ILE 238 B ALA 239 n 217 ALA 239 B ASP 240 n 218 ASP 240 B ALA 241 n 219 ALA 241 B PHE 242 n 220 PHE 242 B SER 243 n 221 SER 243 B SER 244 n 222 SER 244 B VAL 245 n 223 VAL 245 B ALA 246 n 224 ALA 246 B GLY 247 n 225 GLY 247 B SER 248 n 226 SER 248 B GLU 249 n 227 GLU 249 B LEU 250 n 228 LEU 250 B ILE 251 n 229 ILE 251 B PHE 252 n 230 PHE 252 B LEU 253 n 231 LEU 253 B GLU 254 n 232 GLU 254 B ASP 255 n 233 ASP 255 B SER 256 n 234 SER 256 B PRO 257 n 235 PRO 257 B ASP 258 n 236 ASP 258 B TYR 259 n 237 TYR 259 B CYS 260 n 238 CYS 260 B LEU 261 n 239 LEU 261 B LYS 262 n 240 LYS 262 B ASN 263 n 241 ASN 263 B ILE 264 n 242 ILE 264 B SER 265 n 243 SER 265 B LEU 266 n 244 LEU 266 B GLY 267 n 245 GLY 267 B LEU 268 n 246 LEU 268 B GLN 269 n 247 GLN 269 B GLY 270 n 248 GLY 270 B THR 271 n 249 THR 271 B GLU 272 n 250 GLU 272 B GLY 273 n 251 GLY 273 B ARG 274 n 252 ARG 274 B GLU 275 n 253 GLU 275 B CYS 276 n 254 CYS 276 B LEU 277 n 255 LEU 277 B GLN 278 n 256 GLN 278 B SER 279 n 257 SER 279 B GLY 280 n 258 GLY 280 B LYS 281 n 259 LYS 281 B ASN 282 n 260 ASN 282 B LEU 283 n 261 LEU 283 B SER 284 n 262 SER 284 B GLN 285 n 263 GLN 285 B TRP 286 n 264 TRP 286 B GLU 287 n 265 GLU 287 B ARG 288 n 266 ARG 288 B ARG 289 n 267 ARG 289 B SER 290 n 268 SER 290 B CYS 291 n 269 CYS 291 B LYS 292 n 270 LYS 292 B ARG 293 n 271 ARG 293 B LEU 294 n 272 LEU 294 B CYS 295 n 273 CYS 295 B THR 296 n 274 THR 296 B ASP 297 n 275 ASP 297 B CYS 298 n 276 CYS 298 B GLY 299 n 277 GLY 299 B LEU 300 n 278 LEU 300 B ARG 301 n 279 ARG 301 B VAL 302 n 280 VAL 302 B GLU 303 n 281 GLU 303 B GLU 304 n 282 GLU 304 B LYS 305 n 283 LYS 305 B LYS 306 n 284 LYS 306 B THR 307 n 285 THR 307 B GLU 308 n 286 GLU 308 B ILE 309 n 287 ILE 309 B ILE 310 n 288 ILE 310 B SER 311 n 289 SER 311 B SER 312 n 290 SER 312 B CYS 313 n 291 CYS 313 B ASN 314 n 292 ASN 314 B CYS 315 n 293 CYS 315 B LYS 316 n 294 LYS 316 B PHE 317 n 295 PHE 317 B HIS 318 n 296 HIS 318 B TRP 319 n 297 TRP 319 B CYS 320 n 298 CYS 320 B CYS 321 n 299 CYS 321 B THR 322 n 300 THR 322 B VAL 323 n 301 VAL 323 B LYS 324 n 302 LYS 324 B CYS 325 n 303 CYS 325 B GLU 326 n 304 GLU 326 B GLN 327 n 305 GLN 327 B CYS 328 n 306 CYS 328 B LYS 329 n 307 LYS 329 B GLN 330 n 308 GLN 330 B VAL 331 n 309 VAL 331 B VAL 332 n 310 VAL 332 B ILE 333 n 311 ILE 333 B LYS 334 n 312 LYS 334 B HIS 335 n 313 HIS 335 B PHE 336 n 314 PHE 336 B CYS 337 n 315 CYS 337 B ALA 338 n 316 ALA 338 B author_defined_assembly 2 dimeric B HIS 76 B NE2 HIS 54 1_555 B ZN 410 G ZN ZN 1_555 B HIS 90 B NE2 HIS 68 1_555 119.6 B HIS 76 B NE2 HIS 54 1_555 B ZN 410 G ZN ZN 1_555 B GLU 152 B OE2 GLU 130 1_555 82.7 B HIS 90 B NE2 HIS 68 1_555 B ZN 410 G ZN ZN 1_555 B GLU 152 B OE2 GLU 130 1_555 123.4 B GLU 304 B OE2 GLU 282 1_555 B ZN 411 H ZN ZN 1_555 B HIS 335 B NE2 HIS 313 1_555 101.8 B ASN 104 GLYCOSYLATION SITE B ASN 82 ASN A ASN 49 GLYCOSYLATION SITE A ASN 22 ASN B ASN 263 GLYCOSYLATION SITE B ASN 241 ASN B SER 187 ACYLATION SITE B SER 165 SER 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLN 36 A N GLN 9 A O THR 51 A O THR 24 B N GLY 125 B N GLY 103 B O TRP 128 B O TRP 106 B N VAL 129 B N VAL 107 B O CYS 195 B O CYS 173 B O GLN 198 B O GLN 176 B N LYS 178 B N LYS 156 B N LEU 217 B N LEU 195 B O PHE 252 B O PHE 230 B N ASN 263 B N ASN 241 B O LEU 268 B O LEU 246 B N CYS 276 B N CYS 254 B O HIS 335 B O HIS 313 B O GLN 330 B O GLN 308 B N ILE 309 B N ILE 287 1 A CG LYS 101 A CG LYS 74 1 Y 1 A CD LYS 101 A CD LYS 74 1 Y 1 A CE LYS 101 A CE LYS 74 1 Y 1 A NZ LYS 101 A NZ LYS 74 1 Y 1 A CG LYS 102 A CG LYS 75 1 Y 1 A CD LYS 102 A CD LYS 75 1 Y 1 A CE LYS 102 A CE LYS 75 1 Y 1 A NZ LYS 102 A NZ LYS 75 1 Y 1 B CG MET 221 B CG MET 199 1 Y 1 B SD MET 221 B SD MET 199 1 Y 1 B CE MET 221 B CE MET 199 1 Y 1 B CG LYS 281 B CG LYS 259 1 Y 1 B CD LYS 281 B CD LYS 259 1 Y 1 B CE LYS 281 B CE LYS 259 1 Y 1 B NZ LYS 281 B NZ LYS 259 1 Y 1 B CG LYS 316 B CG LYS 294 1 Y 1 B CD LYS 316 B CD LYS 294 1 Y 1 B CE LYS 316 B CE LYS 294 1 Y 1 B NZ LYS 316 B NZ LYS 294 1 Y 1 B CG LYS 324 B CG LYS 302 1 Y 1 B CD LYS 324 B CD LYS 302 1 Y 1 B CE LYS 324 B CE LYS 302 1 Y 1 B NZ LYS 324 B NZ LYS 302 1 Y 1 B CG LYS 329 B CG LYS 307 1 Y 1 B CD LYS 329 B CD LYS 307 1 Y 1 B CE LYS 329 B CE LYS 307 1 Y 1 B NZ LYS 329 B NZ LYS 307 1 Y 1 B O1 PAM 409 F O1 PAM 1 1 N 1 B C15 PAM 409 F C15 PAM 1 1 N 1 B C16 PAM 409 F C16 PAM 1 1 N 1 A ALA 28 A ALA 1 1 Y 1 A SER 29 A SER 2 1 Y 1 A ALA 30 A ALA 3 1 Y 1 A LYS 31 A LYS 4 1 Y 1 A GLU 32 A GLU 5 1 Y 1 A LEU 33 A LEU 6 1 Y 1 A ALA 34 A ALA 7 1 Y 1 A ALA 153 A ALA 126 1 Y 1 A LEU 154 A LEU 127 1 Y 1 A GLU 155 A GLU 128 1 Y 1 A VAL 156 A VAL 129 1 Y 1 A LEU 157 A LEU 130 1 Y 1 A PHE 158 A PHE 131 1 Y 1 A GLN 159 A GLN 132 1 Y 1 B ALA 23 B ALA 1 1 Y 1 B TRP 24 B TRP 2 1 Y 1 B SER 25 B SER 3 1 Y 1 B VAL 26 B VAL 4 1 Y 1 B ASN 27 B ASN 5 1 Y 1 B ASN 28 B ASN 6 1 Y 1 B PHE 29 B PHE 7 1 Y 1 B LEU 30 B LEU 8 1 Y 1 B MET 31 B MET 9 1 Y 1 B ASP 222 B ASP 200 1 Y 1 B LYS 223 B LYS 201 1 Y 1 B ARG 224 B ARG 202 1 Y 1 B LYS 225 B LYS 203 1 Y 1 B MET 226 B MET 204 1 Y 1 B ARG 227 B ARG 205 1 Y 1 B SER 228 B SER 206 1 Y 1 B GLY 229 B GLY 207 1 Y 1 B ASN 230 B ASN 208 1 Y 1 B SER 231 B SER 209 1 Y 1 B ALA 232 B ALA 210 1 Y 1 B ASP 233 B ASP 211 1 Y 1 B ASN 234 B ASN 212 1 Y 1 B B OG C1 SER PAM 187 409 1.40 1 A ASN 58 61.07 67.92 1 B PRO 34 -48.13 -17.45 1 B CYS 66 54.19 71.30 1 B LEU 79 -156.06 54.97 1 B ALA 82 -72.87 45.68 1 B CYS 115 -103.33 -165.97 1 B ARG 119 72.67 -8.12 1 B GLN 278 -106.17 -72.07 1 B ASN 282 -115.43 71.88 1 B CYS 295 -96.76 -76.71 1 B CYS 320 74.44 153.54 1 B CYS 321 56.83 -42.12 6.1583 0.0000 -0.0000 6.1583 0.0000 -12.3166 0.2345 0.2035 0.2051 3.250 28.64 1499 30618 29898 5.01 97.77 0.41 1 1.11 MIRAS 24.55 0.86 1.10 ML FLAT BULK SOLVENT MODEL 70.166 0.341 3.250 28.64 0 3334 145 0 3189 0.005 3423 0.880 4614 22.458 1284 0.267 515 0.003 586 0.3050 0.3058 3.3549 134 2629 99.00 0.3085 0.2685 3.4746 144 2560 98.00 0.3442 0.2513 3.6135 128 2665 98.00 0.3198 0.2399 3.7776 170 2520 98.00 0.2688 0.2200 3.9763 149 2554 97.00 0.2096 0.1982 4.2247 143 2550 98.00 0.2413 0.1733 4.5497 111 2629 98.00 0.2096 0.1757 5.0054 133 2568 98.00 0.1948 0.1927 5.7246 137 2588 98.00 0.2375 0.1881 7.1935 83 2619 98.00 0.1918 0.1874 28.6451 167 2517 96.00 3.25 28.64 4F0A 29898 0.064 1 12.4 2.3 97.7 3.25 3.30 2.0 0.582 1 2.4 98.7 data collection Blu-Ice phasing SHARP refinement PHENIX (phenix.refine: 1.7.3_928) data reduction XDS data scaling XSCALE Frizzled 8 cysteine-rich domain from Mus musculus, Wnt8 from Xenopus laevis Crystal structure of XWnt8 in complex with the cysteine-rich domain of Frizzled 8 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 7 N N 7 N N A VAL 40 A VAL 13 HELX_P A LYS 44 A LYS 17 5 1 5 A THR 61 A THR 34 HELX_P A HIS 70 A HIS 43 1 2 10 A PHE 72 A PHE 45 HELX_P A GLN 79 A GLN 52 1 3 8 A ASP 83 A ASP 56 HELX_P A THR 93 A THR 66 1 4 11 A CYS 107 A CYS 80 HELX_P A TYR 125 A TYR 98 1 5 19 A PRO 130 A PRO 103 HELX_P A ARG 134 A ARG 107 5 6 5 B GLY 33 B GLY 11 HELX_P B PHE 59 B PHE 37 1 7 27 B LEU 71 B LEU 49 HELX_P B HIS 76 B HIS 54 1 8 6 B THR 83 B THR 61 HELX_P B MET 107 B MET 85 1 9 25 B ASN 136 B ASN 114 HELX_P B ASP 149 B ASP 127 1 10 14 B ASP 156 B ASP 134 HELX_P B THR 176 B THR 154 1 11 21 B GLU 201 B GLU 179 HELX_P B GLN 215 B GLN 193 1 12 15 B GLY 236 B GLY 214 HELX_P B PHE 242 B PHE 220 1 13 7 B SER 284 B SER 262 HELX_P B ARG 289 B ARG 267 1 14 6 B ARG 289 B ARG 267 HELX_P B CYS 295 B CYS 273 1 15 7 B THR 296 B THR 274 HELX_P B GLY 299 B GLY 277 5 16 4 disulf 2.033 A CYS 35 A SG CYS 8 1_555 A CYS 96 A SG CYS 69 1_555 disulf 2.036 A CYS 43 A SG CYS 16 1_555 A CYS 89 A SG CYS 62 1_555 disulf 2.026 A CYS 80 A SG CYS 53 1_555 A CYS 118 A SG CYS 91 1_555 disulf 2.029 A CYS 107 A SG CYS 80 1_555 A CYS 148 A SG CYS 121 1_555 disulf 2.038 A CYS 111 A SG CYS 84 1_555 A CYS 135 A SG CYS 108 1_555 disulf 2.051 B CYS 55 B SG CYS 33 1_555 B CYS 66 B SG CYS 44 1_555 disulf 2.039 B CYS 105 B SG CYS 83 1_555 B CYS 113 B SG CYS 91 1_555 disulf 2.040 B CYS 115 B SG CYS 93 1_555 B CYS 133 B SG CYS 111 1_555 disulf 2.042 B CYS 181 B SG CYS 159 1_555 B CYS 195 B SG CYS 173 1_555 disulf 2.037 B CYS 183 B SG CYS 161 1_555 B CYS 190 B SG CYS 168 1_555 disulf 2.036 B CYS 260 B SG CYS 238 1_555 B CYS 298 B SG CYS 276 1_555 disulf 2.048 B CYS 276 B SG CYS 254 1_555 B CYS 291 B SG CYS 269 1_555 disulf 2.035 B CYS 295 B SG CYS 273 1_555 B CYS 337 B SG CYS 315 1_555 disulf 2.037 B CYS 313 B SG CYS 291 1_555 B CYS 328 B SG CYS 306 1_555 disulf 2.031 B CYS 315 B SG CYS 293 1_555 B CYS 325 B SG CYS 303 1_555 disulf 2.034 B CYS 320 B SG CYS 298 1_555 B CYS 321 B SG CYS 299 1_555 covale 1.438 one N-Glycosylation A ASN 49 A ND2 ASN 22 1_555 C NAG 1 C C1 NAG 1_555 covale 1.446 one N-Glycosylation B ASN 104 B ND2 ASN 82 1_555 D NAG 1 D C1 NAG 1_555 covale 1.444 one N-Glycosylation B ASN 263 B ND2 ASN 241 1_555 E NAG 1 E C1 NAG 1_555 covale 1.452 both C NAG 1 C O4 NAG 1_555 C NAG 2 C C1 NAG 1_555 covale 1.447 both D NAG 1 D O4 NAG 1_555 D NAG 2 D C1 NAG 1_555 covale 1.443 both D NAG 2 D O4 NAG 1_555 D BMA 3 D C1 BMA 1_555 covale 1.442 both D BMA 3 D O3 BMA 1_555 D MAN 4 D C1 MAN 1_555 covale 1.448 both E NAG 1 E O4 NAG 1_555 E NAG 2 E C1 NAG 1_555 covale 1.460 both E NAG 1 E O6 NAG 1_555 E FUC 4 E C1 FUC 1_555 covale 1.444 both E NAG 2 E O4 NAG 1_555 E BMA 3 E C1 BMA 1_555 metalc 2.475 B HIS 76 B NE2 HIS 54 1_555 B ZN 410 G ZN ZN 1_555 metalc 2.456 B HIS 90 B NE2 HIS 68 1_555 B ZN 410 G ZN ZN 1_555 metalc 2.364 B GLU 152 B OE2 GLU 130 1_555 B ZN 410 G ZN ZN 1_555 metalc 2.617 B HIS 208 B ND1 HIS 186 1_555 B ZN 412 I ZN ZN 1_555 metalc 2.410 B GLU 304 B OE2 GLU 282 1_555 B ZN 411 H ZN ZN 1_555 metalc 2.278 B HIS 335 B NE2 HIS 313 1_555 B ZN 411 H ZN ZN 1_555 SIGNALING PROTEIN Wnt signaling, Ligand-receptor complex, Wnt, Frizzled, Fatty acid acylation, Glycosylation, SIGNALING PROTEIN A MET 53 A MET 26 1 A PRO 54 A PRO 27 0.23 FZD8_MOUSE UNP 1 28 Q61091 ASAKELACQEITVPLCKGIGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPLPPC RSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMD WNT8_XENLA UNP 2 23 P28026 AWSVNNFLMTGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLT RNCSMGDFDNCGCDDSRNGRIGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCK CHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSPDYCLK NISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA 28 150 4F0A 28 150 Q61091 A 1 1 123 23 338 4F0A 23 338 P28026 B 2 1 316 1 expression tag ALA 151 4F0A A Q61091 UNP 124 1 expression tag ALA 152 4F0A A Q61091 UNP 125 1 expression tag ALA 153 4F0A A Q61091 UNP 126 1 expression tag LEU 154 4F0A A Q61091 UNP 127 1 expression tag GLU 155 4F0A A Q61091 UNP 128 1 expression tag VAL 156 4F0A A Q61091 UNP 129 1 expression tag LEU 157 4F0A A Q61091 UNP 130 1 expression tag PHE 158 4F0A A Q61091 UNP 131 1 expression tag GLN 159 4F0A A Q61091 UNP 132 2 4 2 2 3 anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A GLN 36 A GLN 9 A GLU 37 A GLU 10 A TYR 50 A TYR 23 A THR 51 A THR 24 B ILE 123 B ILE 101 B GLY 125 B GLY 103 B TRP 128 B TRP 106 B TRP 130 B TRP 108 B GLN 193 B GLN 171 B GLN 198 B GLN 176 B LYS 178 B LYS 156 B CYS 183 B CYS 161 B LEU 217 B LEU 195 B LYS 218 B LYS 196 B ILE 251 B ILE 229 B PHE 252 B PHE 230 B LYS 262 B LYS 240 B ASN 263 B ASN 241 B LEU 268 B LEU 246 B GLN 269 B GLN 247 B GLU 275 B GLU 253 B CYS 276 B CYS 254 B GLN 327 B GLN 305 B ALA 338 B ALA 316 B ARG 301 B ARG 279 B SER 312 B SER 290 76 P 41