0.021183
0.000000
0.000000
0.000000
0.012715
0.000000
0.000000
0.000000
0.042635
0.00000
0.00000
0.00000
Fu, Y.
Dann III, C.E.
Giedroc, D.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
47.208
78.647
23.455
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
Cu 1
63.546
COPPER (I) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
CU
N
76
N
N
N
77
R
C
N
78
N
C
N
79
N
O
N
80
N
C
N
81
N
S
N
82
N
O
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
N
N
91
S
C
N
92
N
C
N
93
N
O
N
94
N
C
N
95
N
C
N
96
N
C
N
97
N
O
N
98
N
N
N
99
N
O
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
S
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
O
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
N
C
N
131
N
C
N
132
N
O
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
N
N
140
S
C
N
141
N
C
N
142
N
O
N
143
N
C
Y
144
N
C
Y
145
N
N
Y
146
N
C
Y
147
N
C
Y
148
N
N
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
S
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
N
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
S
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
N
N
307
S
C
N
308
N
C
N
309
N
O
N
310
R
C
N
311
N
O
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
N
334
N
O
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
N
352
N
C
N
353
N
C
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
doub
N
324
N
sing
Y
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
US
Nat.Chem.Biol.
1552-4450
9
177
183
10.1038/nchembio.1168
23354287
A new structural paradigm in copper resistance in Streptococcus pneumoniae.
2013
10.2210/pdb4f2e/pdb
pdb_00004f2e
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113
1
IMAGE PLATE
2011-06-25
RIGAKU RAXIS IV++
osmic mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.54178
1.0
1.54178
ROTATING ANODE
RIGAKU
10887.588
CupA
UNP residues 29-123
1
man
polymer
63.546
COPPER (I) ION
2
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
18.015
water
192
nat
water
no
no
GAMGQKAQQKNGYQEIRVEVMGGYTPELIVLKKSVPARIVFDRKDPSPCLDQIVFPDFGVHANLPMGEEYVVEITPEQAG
EFSFACGMNMMHGKMIVE
GAMGQKAQQKNGYQEIRVEVMGGYTPELIVLKKSVPARIVFDRKDPSPCLDQIVFPDFGVHANLPMGEEYVVEITPEQAG
EFSFACGMNMMHGKMIVE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
D39 / NCTC 7466
sample
SPD0634, SPD_0634
373153
Streptococcus pneumoniae
469008
Escherichia coli
BL21(DE3)
plasmid
pHis
1
2.00
38.49
VAPOR DIFFUSION, HANGING DROP
5.0
30% w/v PEG3350, 0.1 M sodium citrate tribasic dihydrate, pH 5.0, Deoxy Big CHAP, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_special_symmetry
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
1
0
2013-01-30
1
1
2013-02-13
1
2
2013-03-06
1
3
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-05-07
REL
REL
CU1
COPPER (I) ION
CL
CHLORIDE ION
HOH
water
CU1
126
2
CU1
CU1
201
A
CU1
127
2
CU1
CU1
202
A
CL
131
3
CL
CL
203
A
HOH
1
4
HOH
HOH
301
A
HOH
2
4
HOH
HOH
302
A
HOH
3
4
HOH
HOH
303
A
HOH
4
4
HOH
HOH
304
A
HOH
5
4
HOH
HOH
305
A
HOH
6
4
HOH
HOH
306
A
HOH
7
4
HOH
HOH
307
A
HOH
8
4
HOH
HOH
308
A
HOH
9
4
HOH
HOH
309
A
HOH
10
4
HOH
HOH
310
A
HOH
11
4
HOH
HOH
311
A
HOH
12
4
HOH
HOH
312
A
HOH
13
4
HOH
HOH
313
A
HOH
14
4
HOH
HOH
314
A
HOH
15
4
HOH
HOH
315
A
HOH
16
4
HOH
HOH
316
A
HOH
17
4
HOH
HOH
317
A
HOH
18
4
HOH
HOH
318
A
HOH
19
4
HOH
HOH
319
A
HOH
20
4
HOH
HOH
320
A
HOH
21
4
HOH
HOH
321
A
HOH
22
4
HOH
HOH
322
A
HOH
23
4
HOH
HOH
323
A
HOH
24
4
HOH
HOH
324
A
HOH
25
4
HOH
HOH
325
A
HOH
26
4
HOH
HOH
326
A
HOH
27
4
HOH
HOH
327
A
HOH
28
4
HOH
HOH
328
A
HOH
29
4
HOH
HOH
329
A
HOH
30
4
HOH
HOH
330
A
HOH
31
4
HOH
HOH
331
A
HOH
32
4
HOH
HOH
332
A
HOH
33
4
HOH
HOH
333
A
HOH
34
4
HOH
HOH
334
A
HOH
35
4
HOH
HOH
335
A
HOH
36
4
HOH
HOH
336
A
HOH
37
4
HOH
HOH
337
A
HOH
38
4
HOH
HOH
338
A
HOH
39
4
HOH
HOH
339
A
HOH
40
4
HOH
HOH
340
A
HOH
41
4
HOH
HOH
341
A
HOH
42
4
HOH
HOH
342
A
HOH
43
4
HOH
HOH
343
A
HOH
44
4
HOH
HOH
344
A
HOH
45
4
HOH
HOH
345
A
HOH
46
4
HOH
HOH
346
A
HOH
47
4
HOH
HOH
347
A
HOH
48
4
HOH
HOH
348
A
HOH
49
4
HOH
HOH
349
A
HOH
50
4
HOH
HOH
350
A
HOH
51
4
HOH
HOH
351
A
HOH
52
4
HOH
HOH
352
A
HOH
53
4
HOH
HOH
353
A
HOH
54
4
HOH
HOH
354
A
HOH
55
4
HOH
HOH
355
A
HOH
56
4
HOH
HOH
356
A
HOH
57
4
HOH
HOH
357
A
HOH
58
4
HOH
HOH
358
A
HOH
59
4
HOH
HOH
359
A
HOH
60
4
HOH
HOH
360
A
HOH
61
4
HOH
HOH
361
A
HOH
62
4
HOH
HOH
362
A
HOH
63
4
HOH
HOH
363
A
HOH
64
4
HOH
HOH
364
A
HOH
65
4
HOH
HOH
365
A
HOH
66
4
HOH
HOH
366
A
HOH
67
4
HOH
HOH
367
A
HOH
68
4
HOH
HOH
368
A
HOH
69
4
HOH
HOH
369
A
HOH
70
4
HOH
HOH
370
A
HOH
71
4
HOH
HOH
371
A
HOH
72
4
HOH
HOH
372
A
HOH
73
4
HOH
HOH
373
A
HOH
74
4
HOH
HOH
374
A
HOH
75
4
HOH
HOH
375
A
HOH
76
4
HOH
HOH
376
A
HOH
77
4
HOH
HOH
377
A
HOH
78
4
HOH
HOH
378
A
HOH
79
4
HOH
HOH
379
A
HOH
80
4
HOH
HOH
380
A
HOH
81
4
HOH
HOH
381
A
HOH
82
4
HOH
HOH
382
A
HOH
83
4
HOH
HOH
383
A
HOH
84
4
HOH
HOH
384
A
HOH
85
4
HOH
HOH
385
A
HOH
86
4
HOH
HOH
386
A
HOH
87
4
HOH
HOH
387
A
HOH
88
4
HOH
HOH
388
A
HOH
89
4
HOH
HOH
389
A
HOH
90
4
HOH
HOH
390
A
HOH
91
4
HOH
HOH
391
A
HOH
92
4
HOH
HOH
392
A
HOH
93
4
HOH
HOH
393
A
HOH
94
4
HOH
HOH
394
A
HOH
95
4
HOH
HOH
395
A
HOH
96
4
HOH
HOH
396
A
HOH
97
4
HOH
HOH
397
A
HOH
98
4
HOH
HOH
398
A
HOH
99
4
HOH
HOH
399
A
HOH
100
4
HOH
HOH
400
A
HOH
101
4
HOH
HOH
401
A
HOH
102
4
HOH
HOH
402
A
HOH
103
4
HOH
HOH
403
A
HOH
104
4
HOH
HOH
404
A
HOH
105
4
HOH
HOH
405
A
HOH
106
4
HOH
HOH
406
A
HOH
107
4
HOH
HOH
407
A
HOH
108
4
HOH
HOH
408
A
HOH
109
4
HOH
HOH
409
A
HOH
110
4
HOH
HOH
410
A
HOH
111
4
HOH
HOH
411
A
HOH
112
4
HOH
HOH
412
A
HOH
113
4
HOH
HOH
413
A
HOH
114
4
HOH
HOH
414
A
HOH
115
4
HOH
HOH
415
A
HOH
116
4
HOH
HOH
416
A
HOH
117
4
HOH
HOH
417
A
HOH
118
4
HOH
HOH
418
A
HOH
119
4
HOH
HOH
419
A
HOH
120
4
HOH
HOH
420
A
HOH
121
4
HOH
HOH
421
A
HOH
122
4
HOH
HOH
422
A
HOH
123
4
HOH
HOH
423
A
HOH
124
4
HOH
HOH
424
A
HOH
125
4
HOH
HOH
425
A
HOH
126
4
HOH
HOH
426
A
HOH
127
4
HOH
HOH
427
A
HOH
128
4
HOH
HOH
428
A
HOH
129
4
HOH
HOH
429
A
HOH
130
4
HOH
HOH
430
A
HOH
131
4
HOH
HOH
431
A
HOH
132
4
HOH
HOH
432
A
HOH
133
4
HOH
HOH
433
A
HOH
134
4
HOH
HOH
434
A
HOH
135
4
HOH
HOH
435
A
HOH
136
4
HOH
HOH
436
A
HOH
137
4
HOH
HOH
437
A
HOH
138
4
HOH
HOH
438
A
HOH
139
4
HOH
HOH
439
A
HOH
140
4
HOH
HOH
440
A
HOH
141
4
HOH
HOH
441
A
HOH
142
4
HOH
HOH
442
A
HOH
143
4
HOH
HOH
443
A
HOH
144
4
HOH
HOH
444
A
HOH
145
4
HOH
HOH
445
A
HOH
146
4
HOH
HOH
446
A
HOH
147
4
HOH
HOH
447
A
HOH
148
4
HOH
HOH
448
A
HOH
149
4
HOH
HOH
449
A
HOH
150
4
HOH
HOH
450
A
HOH
151
4
HOH
HOH
451
A
HOH
152
4
HOH
HOH
452
A
HOH
153
4
HOH
HOH
453
A
HOH
154
4
HOH
HOH
454
A
HOH
155
4
HOH
HOH
455
A
HOH
156
4
HOH
HOH
456
A
HOH
157
4
HOH
HOH
457
A
HOH
158
4
HOH
HOH
458
A
HOH
159
4
HOH
HOH
459
A
HOH
160
4
HOH
HOH
460
A
HOH
161
4
HOH
HOH
461
A
HOH
162
4
HOH
HOH
462
A
HOH
163
4
HOH
HOH
463
A
HOH
164
4
HOH
HOH
464
A
HOH
165
4
HOH
HOH
465
A
HOH
166
4
HOH
HOH
466
A
HOH
167
4
HOH
HOH
467
A
HOH
168
4
HOH
HOH
468
A
HOH
169
4
HOH
HOH
469
A
HOH
170
4
HOH
HOH
470
A
HOH
171
4
HOH
HOH
471
A
HOH
172
4
HOH
HOH
472
A
HOH
173
4
HOH
HOH
473
A
HOH
174
4
HOH
HOH
474
A
HOH
175
4
HOH
HOH
475
A
HOH
176
4
HOH
HOH
476
A
HOH
177
4
HOH
HOH
477
A
HOH
178
4
HOH
HOH
478
A
HOH
179
4
HOH
HOH
479
A
HOH
180
4
HOH
HOH
480
A
HOH
181
4
HOH
HOH
481
A
HOH
182
4
HOH
HOH
482
A
HOH
183
4
HOH
HOH
483
A
HOH
184
4
HOH
HOH
484
A
HOH
185
4
HOH
HOH
485
A
HOH
186
4
HOH
HOH
486
A
HOH
187
4
HOH
HOH
487
A
HOH
188
4
HOH
HOH
488
A
HOH
189
4
HOH
HOH
489
A
HOH
190
4
HOH
HOH
490
A
HOH
191
4
HOH
HOH
491
A
HOH
192
4
HOH
HOH
492
A
GLY
26
n
1
GLY
26
A
ALA
27
n
2
ALA
27
A
MET
28
n
3
MET
28
A
GLY
29
n
4
GLY
29
A
GLN
30
n
5
GLN
30
A
LYS
31
n
6
LYS
31
A
ALA
32
n
7
ALA
32
A
GLN
33
n
8
GLN
33
A
GLN
34
n
9
GLN
34
A
LYS
35
n
10
LYS
35
A
ASN
36
n
11
ASN
36
A
GLY
37
n
12
GLY
37
A
TYR
38
n
13
TYR
38
A
GLN
39
n
14
GLN
39
A
GLU
40
n
15
GLU
40
A
ILE
41
n
16
ILE
41
A
ARG
42
n
17
ARG
42
A
VAL
43
n
18
VAL
43
A
GLU
44
n
19
GLU
44
A
VAL
45
n
20
VAL
45
A
MET
46
n
21
MET
46
A
GLY
47
n
22
GLY
47
A
GLY
48
n
23
GLY
48
A
TYR
49
n
24
TYR
49
A
THR
50
n
25
THR
50
A
PRO
51
n
26
PRO
51
A
GLU
52
n
27
GLU
52
A
LEU
53
n
28
LEU
53
A
ILE
54
n
29
ILE
54
A
VAL
55
n
30
VAL
55
A
LEU
56
n
31
LEU
56
A
LYS
57
n
32
LYS
57
A
LYS
58
n
33
LYS
58
A
SER
59
n
34
SER
59
A
VAL
60
n
35
VAL
60
A
PRO
61
n
36
PRO
61
A
ALA
62
n
37
ALA
62
A
ARG
63
n
38
ARG
63
A
ILE
64
n
39
ILE
64
A
VAL
65
n
40
VAL
65
A
PHE
66
n
41
PHE
66
A
ASP
67
n
42
ASP
67
A
ARG
68
n
43
ARG
68
A
LYS
69
n
44
LYS
69
A
ASP
70
n
45
ASP
70
A
PRO
71
n
46
PRO
71
A
SER
72
n
47
SER
72
A
PRO
73
n
48
PRO
73
A
CYS
74
n
49
CYS
74
A
LEU
75
n
50
LEU
75
A
ASP
76
n
51
ASP
76
A
GLN
77
n
52
GLN
77
A
ILE
78
n
53
ILE
78
A
VAL
79
n
54
VAL
79
A
PHE
80
n
55
PHE
80
A
PRO
81
n
56
PRO
81
A
ASP
82
n
57
ASP
82
A
PHE
83
n
58
PHE
83
A
GLY
84
n
59
GLY
84
A
VAL
85
n
60
VAL
85
A
HIS
86
n
61
HIS
86
A
ALA
87
n
62
ALA
87
A
ASN
88
n
63
ASN
88
A
LEU
89
n
64
LEU
89
A
PRO
90
n
65
PRO
90
A
MET
91
n
66
MET
91
A
GLY
92
n
67
GLY
92
A
GLU
93
n
68
GLU
93
A
GLU
94
n
69
GLU
94
A
TYR
95
n
70
TYR
95
A
VAL
96
n
71
VAL
96
A
VAL
97
n
72
VAL
97
A
GLU
98
n
73
GLU
98
A
ILE
99
n
74
ILE
99
A
THR
100
n
75
THR
100
A
PRO
101
n
76
PRO
101
A
GLU
102
n
77
GLU
102
A
GLN
103
n
78
GLN
103
A
ALA
104
n
79
ALA
104
A
GLY
105
n
80
GLY
105
A
ALA
106
n
81
GLU
106
A
PHE
107
n
82
PHE
107
A
SER
108
n
83
SER
108
A
PHE
109
n
84
PHE
109
A
ALA
110
n
85
ALA
110
A
CYS
111
n
86
CYS
111
A
GLY
112
n
87
GLY
112
A
MET
113
n
88
MET
113
A
ASN
114
n
89
ASN
114
A
MET
115
n
90
MET
115
A
MET
116
n
91
MET
116
A
HIS
117
n
92
HIS
117
A
GLY
118
n
93
GLY
118
A
ALA
119
n
94
LYS
119
A
MET
120
n
95
MET
120
A
ILE
121
n
96
ILE
121
A
VAL
122
n
97
VAL
122
A
GLU
123
n
98
GLU
123
A
author_defined_assembly
1
monomeric
A
CYS
74
A
SG
CYS
49
1_555
A
CU1
201
B
CU
CU1
1_555
A
CYS
111
A
SG
CYS
86
1_555
157.3
A
CYS
74
A
SG
CYS
49
1_555
A
CU1
202
C
CU
CU1
1_555
A
MET
113
A
SD
MET
88
1_555
128.7
A
CYS
74
A
SG
CYS
49
1_555
A
CU1
202
C
CU
CU1
1_555
A
MET
115
A
SD
MET
90
1_555
118.3
A
MET
113
A
SD
MET
88
1_555
A
CU1
202
C
CU
CU1
1_555
A
MET
115
A
SD
MET
90
1_555
108.5
A
CYS
74
A
SG
CYS
49
1_555
A
CU1
202
C
CU
CU1
1_555
A
CL
203
D
CL
CL
1_555
100.1
A
MET
113
A
SD
MET
88
1_555
A
CU1
202
C
CU
CU1
1_555
A
CL
203
D
CL
CL
1_555
93.2
A
MET
115
A
SD
MET
90
1_555
A
CU1
202
C
CU
CU1
1_555
A
CL
203
D
CL
CL
1_555
97.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
30
A
N
GLN
5
A
O
LEU
53
A
O
LEU
28
A
N
LEU
56
A
N
LEU
31
A
O
ILE
121
A
O
ILE
96
A
O
MET
120
A
O
MET
95
A
N
PHE
107
A
N
PHE
82
A
O
ALA
110
A
O
ALA
85
A
N
VAL
79
A
N
VAL
54
A
N
ILE
78
A
N
ILE
53
A
O
ALA
87
A
O
ALA
62
A
N
GLN
33
A
N
GLN
8
A
O
GLU
40
A
O
GLU
15
A
N
GLU
44
A
N
GLU
19
A
O
THR
50
A
O
THR
25
A
N
GLN
33
A
N
GLN
8
A
O
GLU
40
A
O
GLU
15
A
N
VAL
43
A
N
VAL
18
A
O
VAL
65
A
O
VAL
40
A
N
ALA
62
A
N
ALA
37
A
O
ILE
99
A
O
ILE
74
1
A
CL
203
D
CL
1
A
CG
GLU
106
A
CG
GLU
81
1
Y
1
A
CD
GLU
106
A
CD
GLU
81
1
Y
1
A
OE1
GLU
106
A
OE1
GLU
81
1
Y
1
A
OE2
GLU
106
A
OE2
GLU
81
1
Y
1
A
CG
LYS
119
A
CG
LYS
94
1
Y
1
A
CD
LYS
119
A
CD
LYS
94
1
Y
1
A
CE
LYS
119
A
CE
LYS
94
1
Y
1
A
NZ
LYS
119
A
NZ
LYS
94
1
Y
1
A
A
O
O
HOH
HOH
435
474
2.18
1
A
A
O
O
HOH
HOH
471
474
2.19
1
A
LYS
35
-170.89
142.23
0.6536
-0.0000
0.0000
-0.7192
0.0000
0.0656
0.1998
0.1778
0.1800
1.449
21.005
1619
16223
16186
10.00
99.78
0.46
RANDOM
1
1.35
MOLECULAR REPLACEMENT
15.79
0.61
0.90
ML
FLAT BULK SOLVENT MODEL
38.508
0.374
1.449
21.005
192
946
3
0
751
0.017
801
0.913
1086
11.892
305
0.061
114
0.004
146
0.4522
0.4584
1.4913
130
1170
99.0
0.3218
0.3195
1.5394
132
1186
100.0
0.2458
0.2320
1.5944
131
1179
100.0
0.2115
0.1814
1.6582
132
1197
100.0
0.1820
0.1586
1.7337
133
1192
100.0
0.1852
0.1452
1.8250
135
1212
100.0
0.1860
0.1618
1.9393
134
1200
100.0
0.2039
0.1784
2.0889
133
1201
100.0
0.2006
0.1744
2.2989
136
1226
100.0
0.2082
0.1797
2.6310
138
1245
100.0
0.2094
0.1738
3.3127
137
1237
100.0
0.1606
0.1550
21.0074
148
1322
100.0
1.449
50.0
4F2E
16223
16187
0
0
0.024
1
46.5
6.6
99.8
0.183
1.449
1.48
8.2
1
6.1
99.5
0.160
1.48
1.50
9.9
1
6.3
99.5
0.130
1.50
1.53
11
1
6.4
99.6
0.106
1.53
1.56
12.2
1
6.4
99.8
0.096
1.56
1.60
12.6
1
6.4
99.9
0.081
1.60
1.63
13.4
1
6.5
99.5
0.071
1.63
1.67
13.7
1
6.5
99.6
0.064
1.67
1.72
14.9
1
6.6
99.9
0.053
1.72
1.77
16.6
1
6.6
100.0
0.048
1.77
1.83
17.8
1
6.6
100.0
0.041
1.83
1.89
19.6
1
6.7
100.0
0.035
1.89
1.97
23.7
1
6.7
100.0
0.031
1.97
2.06
30.2
1
6.8
100.0
0.028
2.06
2.17
39.3
1
6.8
100.0
0.026
2.17
2.30
47.2
1
6.9
100.0
0.023
2.30
2.48
52.5
1
6.8
100.0
0.022
2.48
2.73
53.4
1
6.9
100.0
0.020
2.73
3.12
60.9
1
6.9
100.0
0.017
3.12
3.94
69.6
1
6.7
100.0
0.017
3.94
50.00
70.0
1
6.3
98.5
data collection
HKL-2000
model building
PHENIX
refinement
PHENIX
(phenix.refine: 1.7.1_743)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
Crystal structure of the Streptococcus pneumoniae D39 copper chaperone CupA with Cu(I)
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
SER
72
A
SER
47
HELX_P
A
LEU
75
A
LEU
50
5
1
4
metalc
2.156
A
CYS
74
A
SG
CYS
49
1_555
A
CU1
201
B
CU
CU1
1_555
metalc
2.251
A
CYS
74
A
SG
CYS
49
1_555
A
CU1
202
C
CU
CU1
1_555
metalc
2.177
A
CYS
111
A
SG
CYS
86
1_555
A
CU1
201
B
CU
CU1
1_555
metalc
2.308
A
MET
113
A
SD
MET
88
1_555
A
CU1
202
C
CU
CU1
1_555
metalc
2.320
A
MET
115
A
SD
MET
90
1_555
A
CU1
202
C
CU
CU1
1_555
metalc
2.330
A
CU1
202
C
CU
CU1
1_555
A
CL
203
D
CL
CL
1_555
METAL TRANSPORT
cupredoxin fold, Cu(I) chaperone, METAL TRANSPORT
A
THR
50
A
THR
25
1
A
PRO
51
A
PRO
26
-2.52
Q04LG8_STRP2
UNP
1
29
Q04LG8
GQKAQQKNGYQEIRVEVMGGYTPELIVLKKSVPARIVFDRKDPSPCLDQIVFPDFGVHANLPMGEEYVVEITPEQAGEFS
FACGMNMMHGKMIVE
29
123
4F2E
29
123
Q04LG8
A
1
4
98
1
cloning artifact
GLY
26
4F2E
A
Q04LG8
UNP
1
1
cloning artifact
ALA
27
4F2E
A
Q04LG8
UNP
2
1
cloning artifact
MET
28
4F2E
A
Q04LG8
UNP
3
6
3
4
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
GLN
30
A
GLN
5
A
LYS
31
A
LYS
6
A
LEU
53
A
LEU
28
A
LYS
57
A
LYS
32
A
HIS
117
A
HIS
92
A
GLU
123
A
GLU
98
A
GLY
105
A
GLY
80
A
CYS
111
A
CYS
86
A
GLN
77
A
GLN
52
A
PHE
80
A
PHE
55
A
VAL
85
A
VAL
60
A
ASN
88
A
ASN
63
A
GLN
33
A
GLN
8
A
LYS
35
A
LYS
10
A
TYR
38
A
TYR
13
A
VAL
45
A
VAL
20
A
TYR
49
A
TYR
24
A
THR
50
A
THR
25
A
GLN
33
A
GLN
8
A
LYS
35
A
LYS
10
A
TYR
38
A
TYR
13
A
VAL
45
A
VAL
20
A
ALA
62
A
ALA
37
A
ARG
68
A
ARG
43
A
GLU
94
A
GLU
69
A
ILE
99
A
ILE
74
BINDING SITE FOR RESIDUE CU1 A 201
A
CU1
201
Software
3
BINDING SITE FOR RESIDUE CU1 A 202
A
CU1
202
Software
6
BINDING SITE FOR RESIDUE CL A 203
A
CL
203
Software
7
A
CYS
74
A
CYS
49
3
1_555
A
CYS
111
A
CYS
86
3
1_555
A
CU1
202
C
CU1
3
1_555
A
CYS
74
A
CYS
49
6
1_555
A
MET
113
A
MET
88
6
1_555
A
MET
115
A
MET
90
6
1_555
A
CU1
201
B
CU1
6
1_555
A
CL
203
D
CL
6
2_655
A
CL
203
D
CL
6
1_555
A
CYS
74
A
CYS
49
7
1_555
A
CYS
74
A
CYS
49
7
2_655
A
MET
113
A
MET
88
7
1_555
A
MET
113
A
MET
88
7
2_655
A
MET
115
A
MET
90
7
1_555
A
CU1
202
C
CU1
7
2_655
A
CU1
202
C
CU1
7
1_555
18
P 21 21 2