0.025316 0.000000 0.000000 0.000000 0.011873 0.000000 0.000000 0.000000 0.011134 0.000000 0.000000 0.000000 Lopez, M. Segarra, V. Vidal, B. Wenzkowski, C. Jestel, A. Krapp, S. Blaesse, M. Nagel, S. Schreiner, P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 39.501 84.227 89.819 C21 H20 F3 N5 399.412 N-{6-[3-(piperazin-1-yl)phenyl]pyridin-2-yl}-4-(trifluoromethyl)pyridin-2-amine non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C N 10 N N Y 11 N C Y 12 N C Y 13 N C Y 14 N C N 15 N C N 16 N F N 17 N C N 18 N F N 19 N F Y 20 N N Y 21 N C Y 22 N C Y 23 N N Y 24 N C N 25 N N N 26 N C N 27 N C N 28 N N N 29 N C N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N N N 51 S C N 52 N C N 53 N O N 54 N C N 55 N O N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N N N 64 S C N 65 N C N 66 N O N 67 N C N 68 N C N 69 N C N 70 N N N 71 N C N 72 N N N 73 N N N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N C N 113 N O N 114 N O N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 R C N 125 N C N 126 N O N 127 N C N 128 N S N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C N 142 N C N 143 N C N 144 N O N 145 N N N 146 N O N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N N N 158 S C N 159 N C N 160 N O N 161 N C N 162 N C N 163 N C N 164 N O N 165 N O N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N N N 177 N C N 178 N C N 179 N O N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C Y 191 N C Y 192 N N Y 193 N C Y 194 N C Y 195 N N N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N O N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 S C N 215 N C N 216 N C N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N C N 262 N N N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N N N 280 S C N 281 N C N 282 N O N 283 N C N 284 N C N 285 N S N 286 N C N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N N N 300 S C N 301 N C N 302 N O N 303 N C Y 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C N 327 N C N 328 N C N 329 N O N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 N C N 344 N O N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N S N 354 N O N 355 N O N 356 N O N 357 N O N 358 N N N 359 S C N 360 N C N 361 N O N 362 R C N 363 N O N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N N Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N N N 403 S C N 404 N C N 405 N O N 406 N C Y 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C N 413 N O N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 N C N 431 N C N 432 N C N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H Y 1 N doub Y 2 N sing Y 3 N sing N 4 N sing N 5 N sing Y 6 N doub N 7 N sing N 8 N sing Y 9 N doub N 10 N sing N 11 N sing N 12 N sing N 13 N sing Y 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing Y 19 N doub Y 20 N sing Y 21 N doub Y 22 N sing Y 23 N sing Y 24 N sing Y 25 N doub Y 26 N doub Y 27 N doub Y 28 N sing N 29 N sing N 30 N sing Y 31 N doub Y 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N doub N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing Y 192 N sing Y 193 N doub Y 194 N doub N 195 N sing Y 196 N sing N 197 N sing Y 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N doub N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing Y 300 N doub Y 301 N sing Y 302 N sing N 303 N sing Y 304 N doub N 305 N sing Y 306 N doub N 307 N sing Y 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N doub N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing Y 373 N doub Y 374 N sing Y 375 N sing N 376 N sing Y 377 N doub Y 378 N sing Y 379 N sing N 380 N sing Y 381 N sing Y 382 N doub N 383 N sing Y 384 N doub N 385 N sing Y 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing Y 401 N doub Y 402 N sing Y 403 N sing N 404 N sing Y 405 N doub N 406 N sing Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing UK Bioorg.Med.Chem.Lett. BMCLE8 1127 0960-894X 22 5419 5423 10.1016/j.bmcl.2012.07.045 22877633 Highly potent aminopyridines as Syk kinase inhibitors. 2012 10.2210/pdb4f4p/pdb pdb_00004f4p 100.0 1 CCD 2008-07-25 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.000 1.0 X06DA SLS 1.000 SYNCHROTRON SLS BEAMLINE X06DA 31593.416 Tyrosine-protein kinase SYK 2.7.10.2 1 man polymer 399.412 N-{6-[3-(piperazin-1-yl)phenyl]pyridin-2-yl}-4-(trifluoromethyl)pyridin-2-amine 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 21 nat water Spleen tyrosine kinase, p72-Syk no no LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL MNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL MNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample SYK 9606 Homo sapiens 562 Escherichia coli 1 2.430 49.470 audit_author pdbx_unobs_or_zero_occ_atoms chem_comp_atom chem_comp_bond database_2 pdbx_unobs_or_zero_occ_atoms struct_ref_seq_dif struct_site repository Initial release Advisory Structure summary Advisory Data collection Database references Derived calculations 1 0 2012-12-12 1 1 2018-01-24 1 2 2024-02-28 _audit_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-05-11 REL REL 0SB N-{6-[3-(piperazin-1-yl)phenyl]pyridin-2-yl}-4-(trifluoromethyl)pyridin-2-amine SO4 SULFATE ION HOH water INX 1 2 0SB 0SB 701 A SO4 1 3 SO4 SO4 702 A HOH 1 4 HOH HOH 801 A HOH 2 4 HOH HOH 802 A HOH 3 4 HOH HOH 803 A HOH 4 4 HOH HOH 804 A HOH 5 4 HOH HOH 805 A HOH 6 4 HOH HOH 806 A HOH 7 4 HOH HOH 807 A HOH 8 4 HOH HOH 808 A HOH 9 4 HOH HOH 809 A HOH 10 4 HOH HOH 810 A HOH 11 4 HOH HOH 811 A HOH 12 4 HOH HOH 812 A HOH 13 4 HOH HOH 813 A HOH 14 4 HOH HOH 814 A HOH 15 4 HOH HOH 815 A HOH 16 4 HOH HOH 816 A HOH 17 4 HOH HOH 817 A HOH 18 4 HOH HOH 818 A HOH 19 4 HOH HOH 819 A HOH 20 4 HOH HOH 820 A HOH 21 4 HOH HOH 821 A LEU 365 n 1 LEU 365 A ASP 366 n 2 ASP 366 A ARG 367 n 3 ARG 367 A LYS 368 n 4 LYS 368 A LEU 369 n 5 LEU 369 A LEU 370 n 6 LEU 370 A THR 371 n 7 THR 371 A LEU 372 n 8 LEU 372 A GLU 373 n 9 GLU 373 A ASP 374 n 10 ASP 374 A LYS 375 n 11 LYS 375 A GLU 376 n 12 GLU 376 A LEU 377 n 13 LEU 377 A GLY 378 n 14 GLY 378 A SER 379 n 15 SER 379 A GLY 380 n 16 GLY 380 A ASN 381 n 17 ASN 381 A PHE 382 n 18 PHE 382 A GLY 383 n 19 GLY 383 A THR 384 n 20 THR 384 A VAL 385 n 21 VAL 385 A LYS 386 n 22 LYS 386 A LYS 387 n 23 LYS 387 A GLY 388 n 24 GLY 388 A TYR 389 n 25 TYR 389 A n 26 390 A n 27 391 A n 28 392 A n 29 393 A n 30 394 A n 31 395 A VAL 396 n 32 VAL 396 A LYS 397 n 33 LYS 397 A THR 398 n 34 THR 398 A VAL 399 n 35 VAL 399 A ALA 400 n 36 ALA 400 A VAL 401 n 37 VAL 401 A LYS 402 n 38 LYS 402 A ILE 403 n 39 ILE 403 A LEU 404 n 40 LEU 404 A LYS 405 n 41 LYS 405 A n 42 406 A n 43 407 A n 44 408 A n 45 409 A n 46 410 A PRO 411 n 47 PRO 411 A ALA 412 n 48 ALA 412 A LEU 413 n 49 LEU 413 A LYS 414 n 50 LYS 414 A ASP 415 n 51 ASP 415 A GLU 416 n 52 GLU 416 A LEU 417 n 53 LEU 417 A LEU 418 n 54 LEU 418 A ALA 419 n 55 ALA 419 A GLU 420 n 56 GLU 420 A ALA 421 n 57 ALA 421 A ASN 422 n 58 ASN 422 A VAL 423 n 59 VAL 423 A MET 424 n 60 MET 424 A GLN 425 n 61 GLN 425 A GLN 426 n 62 GLN 426 A LEU 427 n 63 LEU 427 A ASP 428 n 64 ASP 428 A ASN 429 n 65 ASN 429 A PRO 430 n 66 PRO 430 A TYR 431 n 67 TYR 431 A ILE 432 n 68 ILE 432 A VAL 433 n 69 VAL 433 A ARG 434 n 70 ARG 434 A MET 435 n 71 MET 435 A ILE 436 n 72 ILE 436 A GLY 437 n 73 GLY 437 A ILE 438 n 74 ILE 438 A CYS 439 n 75 CYS 439 A GLU 440 n 76 GLU 440 A ALA 441 n 77 ALA 441 A GLU 442 n 78 GLU 442 A SER 443 n 79 SER 443 A TRP 444 n 80 TRP 444 A MET 445 n 81 MET 445 A LEU 446 n 82 LEU 446 A VAL 447 n 83 VAL 447 A MET 448 n 84 MET 448 A GLU 449 n 85 GLU 449 A MET 450 n 86 MET 450 A ALA 451 n 87 ALA 451 A GLU 452 n 88 GLU 452 A LEU 453 n 89 LEU 453 A GLY 454 n 90 GLY 454 A PRO 455 n 91 PRO 455 A LEU 456 n 92 LEU 456 A ASN 457 n 93 ASN 457 A LYS 458 n 94 LYS 458 A TYR 459 n 95 TYR 459 A LEU 460 n 96 LEU 460 A GLN 461 n 97 GLN 461 A GLN 462 n 98 GLN 462 A ASN 463 n 99 ASN 463 A ARG 464 n 100 ARG 464 A HIS 465 n 101 HIS 465 A VAL 466 n 102 VAL 466 A LYS 467 n 103 LYS 467 A ASP 468 n 104 ASP 468 A LYS 469 n 105 LYS 469 A ASN 470 n 106 ASN 470 A ILE 471 n 107 ILE 471 A ILE 472 n 108 ILE 472 A GLU 473 n 109 GLU 473 A LEU 474 n 110 LEU 474 A VAL 475 n 111 VAL 475 A HIS 476 n 112 HIS 476 A GLN 477 n 113 GLN 477 A VAL 478 n 114 VAL 478 A SER 479 n 115 SER 479 A MET 480 n 116 MET 480 A GLY 481 n 117 GLY 481 A MET 482 n 118 MET 482 A LYS 483 n 119 LYS 483 A TYR 484 n 120 TYR 484 A LEU 485 n 121 LEU 485 A GLU 486 n 122 GLU 486 A GLU 487 n 123 GLU 487 A SER 488 n 124 SER 488 A ASN 489 n 125 ASN 489 A PHE 490 n 126 PHE 490 A VAL 491 n 127 VAL 491 A HIS 492 n 128 HIS 492 A ARG 493 n 129 ARG 493 A ASP 494 n 130 ASP 494 A LEU 495 n 131 LEU 495 A ALA 496 n 132 ALA 496 A ALA 497 n 133 ALA 497 A ARG 498 n 134 ARG 498 A ASN 499 n 135 ASN 499 A VAL 500 n 136 VAL 500 A LEU 501 n 137 LEU 501 A LEU 502 n 138 LEU 502 A VAL 503 n 139 VAL 503 A THR 504 n 140 THR 504 A GLN 505 n 141 GLN 505 A HIS 506 n 142 HIS 506 A TYR 507 n 143 TYR 507 A ALA 508 n 144 ALA 508 A LYS 509 n 145 LYS 509 A ILE 510 n 146 ILE 510 A SER 511 n 147 SER 511 A ASP 512 n 148 ASP 512 A PHE 513 n 149 PHE 513 A GLY 514 n 150 GLY 514 A LEU 515 n 151 LEU 515 A SER 516 n 152 SER 516 A LYS 517 n 153 LYS 517 A ALA 518 n 154 ALA 518 A LEU 519 n 155 LEU 519 A ARG 520 n 156 ARG 520 A ALA 521 n 157 ALA 521 A ASP 522 n 158 ASP 522 A GLU 523 n 159 GLU 523 A ASN 524 n 160 ASN 524 A TYR 525 n 161 TYR 525 A TYR 526 n 162 TYR 526 A LYS 527 n 163 LYS 527 A ALA 528 n 164 ALA 528 A GLN 529 n 165 GLN 529 A THR 530 n 166 THR 530 A HIS 531 n 167 HIS 531 A GLY 532 n 168 GLY 532 A LYS 533 n 169 LYS 533 A TRP 534 n 170 TRP 534 A PRO 535 n 171 PRO 535 A VAL 536 n 172 VAL 536 A LYS 537 n 173 LYS 537 A TRP 538 n 174 TRP 538 A TYR 539 n 175 TYR 539 A ALA 540 n 176 ALA 540 A PRO 541 n 177 PRO 541 A GLU 542 n 178 GLU 542 A CYS 543 n 179 CYS 543 A ILE 544 n 180 ILE 544 A ASN 545 n 181 ASN 545 A TYR 546 n 182 TYR 546 A TYR 547 n 183 TYR 547 A LYS 548 n 184 LYS 548 A PHE 549 n 185 PHE 549 A SER 550 n 186 SER 550 A SER 551 n 187 SER 551 A LYS 552 n 188 LYS 552 A SER 553 n 189 SER 553 A ASP 554 n 190 ASP 554 A VAL 555 n 191 VAL 555 A TRP 556 n 192 TRP 556 A SER 557 n 193 SER 557 A PHE 558 n 194 PHE 558 A GLY 559 n 195 GLY 559 A VAL 560 n 196 VAL 560 A LEU 561 n 197 LEU 561 A MET 562 n 198 MET 562 A TRP 563 n 199 TRP 563 A GLU 564 n 200 GLU 564 A ALA 565 n 201 ALA 565 A PHE 566 n 202 PHE 566 A SER 567 n 203 SER 567 A TYR 568 n 204 TYR 568 A GLY 569 n 205 GLY 569 A GLN 570 n 206 GLN 570 A LYS 571 n 207 LYS 571 A PRO 572 n 208 PRO 572 A TYR 573 n 209 TYR 573 A ARG 574 n 210 ARG 574 A GLY 575 n 211 GLY 575 A MET 576 n 212 MET 576 A LYS 577 n 213 LYS 577 A GLY 578 n 214 GLY 578 A SER 579 n 215 SER 579 A GLU 580 n 216 GLU 580 A VAL 581 n 217 VAL 581 A THR 582 n 218 THR 582 A ALA 583 n 219 ALA 583 A MET 584 n 220 MET 584 A LEU 585 n 221 LEU 585 A GLU 586 n 222 GLU 586 A LYS 587 n 223 LYS 587 A GLY 588 n 224 GLY 588 A GLU 589 n 225 GLU 589 A ARG 590 n 226 ARG 590 A MET 591 n 227 MET 591 A GLY 592 n 228 GLY 592 A CYS 593 n 229 CYS 593 A PRO 594 n 230 PRO 594 A ALA 595 n 231 ALA 595 A GLY 596 n 232 GLY 596 A CYS 597 n 233 CYS 597 A PRO 598 n 234 PRO 598 A ARG 599 n 235 ARG 599 A GLU 600 n 236 GLU 600 A MET 601 n 237 MET 601 A TYR 602 n 238 TYR 602 A ASP 603 n 239 ASP 603 A LEU 604 n 240 LEU 604 A MET 605 n 241 MET 605 A ASN 606 n 242 ASN 606 A LEU 607 n 243 LEU 607 A CYS 608 n 244 CYS 608 A TRP 609 n 245 TRP 609 A THR 610 n 246 THR 610 A TYR 611 n 247 TYR 611 A ASP 612 n 248 ASP 612 A VAL 613 n 249 VAL 613 A GLU 614 n 250 GLU 614 A ASN 615 n 251 ASN 615 A ARG 616 n 252 ARG 616 A PRO 617 n 253 PRO 617 A GLY 618 n 254 GLY 618 A PHE 619 n 255 PHE 619 A ALA 620 n 256 ALA 620 A ALA 621 n 257 ALA 621 A VAL 622 n 258 VAL 622 A GLU 623 n 259 GLU 623 A LEU 624 n 260 LEU 624 A ARG 625 n 261 ARG 625 A LEU 626 n 262 LEU 626 A ARG 627 n 263 ARG 627 A ASN 628 n 264 ASN 628 A TYR 629 n 265 TYR 629 A TYR 630 n 266 TYR 630 A TYR 631 n 267 TYR 631 A ASP 632 n 268 ASP 632 A VAL 633 n 269 VAL 633 A VAL 634 n 270 VAL 634 A ASN 635 n 271 ASN 635 A GLU 636 n 272 GLU 636 A GLY 637 n 273 GLY 637 A 3.6623 1.9378 -4.1751 4.8349 0.6307 6.8768 -1.3181 0.8832 -0.6110 -1.2699 0.4902 -0.7338 1.9068 -0.9897 0.8280 0.6221 -0.2842 0.4178 0.2484 0.0151 0.4988 refined 11.514 -2.186 10.519 X-RAY DIFFRACTION 5.9654 2.5068 -3.0254 7.4247 -3.8353 4.0758 -0.0103 0.0677 0.3951 0.3459 0.2569 0.0818 -0.2456 -0.2423 -0.2465 -0.2749 0.0220 -0.0087 -0.2179 -0.0441 -0.3390 refined 0.561 15.915 23.398 X-RAY DIFFRACTION A 365 A 450 X-RAY DIFFRACTION 1 A 451 A 637 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLY 378 A N GLY 14 A O VAL 385 A O VAL 21 A N THR 384 A N THR 20 A O ILE 403 A O ILE 39 A N ALA 400 A N ALA 36 A O MET 448 A O MET 84 A O VAL 447 A O VAL 83 A N GLY 437 A N GLY 73 A N GLY 454 A N GLY 90 A O LEU 502 A O LEU 138 A N VAL 503 A N VAL 139 A O TYR 507 A O TYR 143 A N VAL 491 A N VAL 127 A O LYS 517 A O LYS 153 A N TYR 526 A N TYR 162 A O PHE 549 A O PHE 185 1 A CG ASN 381 A CG ASN 17 0 Y 1 A OD1 ASN 381 A OD1 ASN 17 0 Y 1 A ND2 ASN 381 A ND2 ASN 17 0 Y 1 A CG PHE 382 A CG PHE 18 0 Y 1 A CD1 PHE 382 A CD1 PHE 18 0 Y 1 A CD2 PHE 382 A CD2 PHE 18 0 Y 1 A CE1 PHE 382 A CE1 PHE 18 0 Y 1 A CE2 PHE 382 A CE2 PHE 18 0 Y 1 A CZ PHE 382 A CZ PHE 18 0 Y 1 A CG LYS 405 A CG LYS 41 0 Y 1 A CD LYS 405 A CD LYS 41 0 Y 1 A CE LYS 405 A CE LYS 41 0 Y 1 A NZ LYS 405 A NZ LYS 41 0 Y 1 A CG LEU 413 A CG LEU 49 0 Y 1 A CD1 LEU 413 A CD1 LEU 49 0 Y 1 A CD2 LEU 413 A CD2 LEU 49 0 Y 1 A NE ARG 464 A NE ARG 100 0 Y 1 A CZ ARG 464 A CZ ARG 100 0 Y 1 A NH1 ARG 464 A NH1 ARG 100 0 Y 1 A NH2 ARG 464 A NH2 ARG 100 0 Y 1 A CD GLN 529 A CD GLN 165 0 Y 1 A OE1 GLN 529 A OE1 GLN 165 0 Y 1 A NE2 GLN 529 A NE2 GLN 165 0 Y 1 A CG LYS 533 A CG LYS 169 0 Y 1 A CD LYS 533 A CD LYS 169 0 Y 1 A CE LYS 533 A CE LYS 169 0 Y 1 A NZ LYS 533 A NZ LYS 169 0 Y 1 A TYR 390 A TYR 26 1 Y 1 A GLN 391 A GLN 27 1 Y 1 A MET 392 A MET 28 1 Y 1 A LYS 393 A LYS 29 1 Y 1 A LYS 394 A LYS 30 1 Y 1 A VAL 395 A VAL 31 1 Y 1 A ASN 406 A ASN 42 1 Y 1 A GLU 407 A GLU 43 1 Y 1 A ALA 408 A ALA 44 1 Y 1 A ASN 409 A ASN 45 1 Y 1 A ASP 410 A ASP 46 1 Y 1 A ALA 441 -151.69 -129.37 1 A ASP 494 -151.49 37.39 1 A ASP 512 62.38 80.95 1 A ASP 512 61.56 80.95 1 A TRP 609 -89.58 39.20 118.060 63.765 20.080 -0.0400 0.0000 0.0000 -4.2300 0.0000 4.2700 0.9280 0.8900 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2846 0.2385 0.2409 2.3700 38.1200 608 12074 5.0000 95.0200 1.000 0.000 26.3380 0.2910 RANDOM 1 THROUGHOUT 0.000 0.5160 0.3040 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.3700 38.1200 21 2176 34 0 2121 0.008 0.022 2200 0.001 0.020 1958 1.045 1.977 2974 0.720 3.000 4559 5.742 5.000 265 34.580 24.343 99 14.944 15.000 387 18.692 15.000 11 0.062 0.200 311 0.004 0.020 2432 0.003 0.020 453 0.193 0.200 486 0.176 0.200 2105 0.181 0.200 1080 0.083 0.200 1138 0.158 0.200 66 0.029 0.200 1 0.090 0.200 7 0.197 0.200 31 0.138 0.200 4 1.626 2.000 1722 0.335 2.000 541 2.066 3.000 2105 3.234 4.000 1079 4.336 6.000 869 0.4320 0.3350 2.4310 39 805 844 20 95.3700 2.370 38.120 4F4P 12709 0.000 0.088 1 5.100 94.700 0.788 2.370 2.570 1 4.000 94.500 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.2.0005 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data reduction XDS data scaling XSCALE SYK in COMPLEX WITH LIGAND LASW836 1 N N 2 N N 3 N N 4 N N A ASP 366 A ASP 2 HELX_P A LEU 370 A LEU 6 5 1 5 A ALA 412 A ALA 48 HELX_P A GLN 426 A GLN 62 1 2 15 A LEU 456 A LEU 92 HELX_P A ASN 463 A ASN 99 1 3 8 A LYS 467 A LYS 103 HELX_P A SER 488 A SER 124 1 4 22 A ALA 496 A ALA 132 HELX_P A ARG 498 A ARG 134 5 5 3 A PRO 535 A PRO 171 HELX_P A TYR 539 A TYR 175 5 6 5 A ALA 540 A ALA 176 HELX_P A TYR 547 A TYR 183 1 7 8 A SER 550 A SER 186 HELX_P A SER 567 A SER 203 1 8 18 A LYS 577 A LYS 213 HELX_P A GLY 588 A GLY 224 1 9 12 A PRO 598 A PRO 234 HELX_P A TRP 609 A TRP 245 1 10 12 A GLY 618 A GLY 254 HELX_P A GLY 637 A GLY 273 1 11 20 TRANSFERASE/TRANSFERASE INHIBITOR Tyrosine-protein kinase, TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR complex KSYK_HUMAN UNP 1 365 P43405 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL MNLCWTYDVENRPGFAAVELRLRNYYYDVVN 365 635 4F4P 365 635 P43405 A 1 1 271 1 expression tag GLU 636 4F4P A P43405 UNP 272 1 expression tag GLY 637 4F4P A P43405 UNP 273 5 3 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLY 378 A GLY 14 A SER 379 A SER 15 A GLY 383 A GLY 19 A GLY 388 A GLY 24 A VAL 399 A VAL 35 A LEU 404 A LEU 40 A TRP 444 A TRP 80 A GLU 449 A GLU 85 A MET 435 A MET 71 A GLU 440 A GLU 76 A GLY 454 A GLY 90 A PRO 455 A PRO 91 A VAL 500 A VAL 136 A THR 504 A THR 140 A TYR 507 A TYR 143 A ILE 510 A ILE 146 A PHE 490 A PHE 126 A VAL 491 A VAL 127 A LYS 517 A LYS 153 A ALA 518 A ALA 154 A TYR 526 A TYR 162 A LYS 527 A LYS 163 A LYS 548 A LYS 184 A PHE 549 A PHE 185 BINDING SITE FOR RESIDUE 0SB A 701 A 0SB 701 Software 14 BINDING SITE FOR RESIDUE SO4 A 702 A SO4 702 Software 5 A GLY 378 A GLY 14 14 1_555 A VAL 385 A VAL 21 14 1_555 A ALA 400 A ALA 36 14 1_555 A MET 448 A MET 84 14 1_555 A GLU 449 A GLU 85 14 1_555 A MET 450 A MET 86 14 1_555 A ALA 451 A ALA 87 14 1_555 A GLY 454 A GLY 90 14 1_555 A PRO 455 A PRO 91 14 1_555 A ARG 498 A ARG 134 14 1_555 A ASN 499 A ASN 135 14 1_555 A LEU 501 A LEU 137 14 1_555 A SER 511 A SER 147 14 1_555 A ASP 512 A ASP 148 14 1_555 A ARG 493 A ARG 129 5 1_555 A TYR 526 A TYR 162 5 1_555 A ALA 528 A ALA 164 5 1_555 A THR 530 A THR 166 5 1_555 A TRP 534 A TRP 170 5 1_555 19 P 21 21 21