0.020414 0.000000 0.000000 0.000000 0.014074 0.000000 0.000000 0.000000 0.010987 0.000000 0.000000 0.000000 Cuff, M.E. Mack, J.C. Zerbs, S. Collart, F. Joachimiak, A. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 48.986 71.055 91.015 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H8 O4 180.157 CAFFEIC ACID 3,4-DIHYDROXYCINNAMIC ACID non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proteins PSFGEY 0867 0887-3585 81 1709 1726 10.1002/prot.24305 23606130 Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids. 2013 100 1 CCD 2012-02-04 ADSC QUANTUM 315r SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 0.97929 1.0 22.29 215442 0.085 0.92 1.850 50.000 27597 98.90 7.80 19-ID APS 0.97929 SYNCHROTRON APS BEAMLINE 19-ID 39155.152 Putative branched-chain amino acid transport system substrate-binding protein 1 man polymer 180.157 CAFFEIC ACID 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 127 nat water no yes SNAETNEITIGITVTTTGPAAALGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVI(MSE)GS SVTPPTVAVSNVANEAQVPHIALAPLPITPERAKWSVA(MSE)PQPIPI(MSE)GKVLYEH(MSE)KKNNIKTVGYIGYS DSYGDLWFNDLKKQGEA(MSE)GLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALPQTSLRERGYKGLIY QTHGAAS(MSE)DFIRIAGKSAEGVL(MSE)ASGPV(MSE)DPEGQDDSALTKKPGLELNTAYEAKYGPNSRSQFAAHSF DAFKVLERVVPVALKTAKPGTQEFREAIRKALVSEKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYV(MSE)VK SNAETNEITIGITVTTTGPAAALGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTP PTVAVSNVANEAQVPHIALAPLPITPERAKWSVAMPQPIPIMGKVLYEHMKKNNIKTVGYIGYSDSYGDLWFNDLKKQGE AMGLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALPQTSLRERGYKGLIYQTHGAASMDFIRIAGKSAEG VLMASGPVMDPEGQDDSALTKKPGLELNTAYEAKYGPNSRSQFAAHSFDAFKVLERVVPVALKTAKPGTQEFREAIRKAL VSEKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYVMVK A MCSG-apc102206 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n CGA009 sample LivK, RPA1789 258594 Rhodopseudomonas palustris 562 Escherichia coli BL21(DE3)magic plasmid pMCSG7 1 2.02 39.19 VAPOR DIFFUSION, SITTING DROP 6.5 0.1M MES:NaOH pH 6.5, 30% PEG 4K, VAPOR DIFFUSION, SITTING DROP, temperature 289K 289 Midwest Center for Structural Genomics MCSG PSI:Biology software repository Initial release Database references Database references Database references Database references Refinement description 1 0 2012-09-26 1 1 2013-05-15 1 2 2013-07-24 1 3 2013-08-07 1 4 2013-09-25 1 5 2017-11-15 same in complex with 3,4-hydoxyphenyl pyruvate same in complex with p-coumarate Y RCSB Y RCSB 2012-05-22 REL REL 0.048 0.659 98.10 7.00 0.052 0.799 99.70 7.30 0.058 0.978 99.50 7.60 0.068 1.049 99.60 7.80 0.080 1.023 99.60 7.90 0.088 1.005 99.40 8.00 0.103 0.983 99.30 8.00 0.118 0.962 99.10 8.00 0.133 0.931 98.80 8.00 0.156 0.934 99.70 8.00 0.184 0.972 98.90 8.00 0.215 0.952 98.20 8.00 0.240 0.933 100.00 8.10 0.290 0.921 97.90 8.00 0.346 0.917 99.20 8.00 0.418 0.921 98.10 7.90 0.437 0.846 98.90 7.90 0.580 0.849 97.60 7.70 0.651 0.857 99.30 7.60 0.684 0.803 96.60 7.50 DHC CAFFEIC ACID GOL GLYCEROL HOH water DHC 1 2 DHC DHC 401 A GOL 1 3 GOL GOL 402 A HOH 1 4 HOH HOH 501 A HOH 2 4 HOH HOH 502 A HOH 3 4 HOH HOH 503 A HOH 4 4 HOH HOH 504 A HOH 5 4 HOH HOH 505 A HOH 6 4 HOH HOH 506 A HOH 7 4 HOH HOH 507 A HOH 8 4 HOH HOH 508 A HOH 9 4 HOH HOH 509 A HOH 10 4 HOH HOH 510 A HOH 11 4 HOH HOH 511 A HOH 12 4 HOH HOH 512 A HOH 13 4 HOH HOH 513 A HOH 14 4 HOH HOH 514 A HOH 15 4 HOH HOH 515 A HOH 16 4 HOH HOH 516 A HOH 17 4 HOH HOH 517 A HOH 18 4 HOH HOH 518 A HOH 19 4 HOH HOH 519 A HOH 20 4 HOH HOH 520 A HOH 21 4 HOH HOH 521 A HOH 22 4 HOH HOH 522 A HOH 23 4 HOH HOH 523 A HOH 24 4 HOH HOH 524 A HOH 25 4 HOH HOH 525 A HOH 26 4 HOH HOH 526 A HOH 27 4 HOH HOH 527 A HOH 28 4 HOH HOH 528 A HOH 29 4 HOH HOH 529 A HOH 30 4 HOH HOH 530 A HOH 31 4 HOH HOH 531 A HOH 32 4 HOH HOH 532 A HOH 33 4 HOH HOH 533 A HOH 34 4 HOH HOH 534 A HOH 35 4 HOH HOH 535 A HOH 36 4 HOH HOH 536 A HOH 37 4 HOH HOH 537 A HOH 38 4 HOH HOH 538 A HOH 39 4 HOH HOH 539 A HOH 40 4 HOH HOH 540 A HOH 41 4 HOH HOH 541 A HOH 42 4 HOH HOH 542 A HOH 43 4 HOH HOH 543 A HOH 44 4 HOH HOH 544 A HOH 45 4 HOH HOH 545 A HOH 46 4 HOH HOH 546 A HOH 47 4 HOH HOH 547 A HOH 48 4 HOH HOH 548 A HOH 49 4 HOH HOH 549 A HOH 50 4 HOH HOH 550 A HOH 51 4 HOH HOH 551 A HOH 52 4 HOH HOH 552 A HOH 53 4 HOH HOH 553 A HOH 54 4 HOH HOH 554 A HOH 55 4 HOH HOH 555 A HOH 56 4 HOH HOH 556 A HOH 57 4 HOH HOH 557 A HOH 58 4 HOH HOH 558 A HOH 59 4 HOH HOH 559 A HOH 60 4 HOH HOH 560 A HOH 61 4 HOH HOH 561 A HOH 62 4 HOH HOH 562 A HOH 63 4 HOH HOH 563 A HOH 64 4 HOH HOH 564 A HOH 65 4 HOH HOH 565 A HOH 66 4 HOH HOH 566 A HOH 67 4 HOH HOH 567 A HOH 68 4 HOH HOH 568 A HOH 69 4 HOH HOH 569 A HOH 70 4 HOH HOH 570 A HOH 71 4 HOH HOH 571 A HOH 72 4 HOH HOH 572 A HOH 73 4 HOH HOH 573 A HOH 74 4 HOH HOH 574 A HOH 75 4 HOH HOH 575 A HOH 76 4 HOH HOH 576 A HOH 77 4 HOH HOH 577 A HOH 78 4 HOH HOH 578 A HOH 79 4 HOH HOH 579 A HOH 80 4 HOH HOH 580 A HOH 81 4 HOH HOH 581 A HOH 82 4 HOH HOH 582 A HOH 83 4 HOH HOH 583 A HOH 84 4 HOH HOH 584 A HOH 85 4 HOH HOH 585 A HOH 86 4 HOH HOH 586 A HOH 87 4 HOH HOH 587 A HOH 88 4 HOH HOH 588 A HOH 89 4 HOH HOH 589 A HOH 90 4 HOH HOH 590 A HOH 91 4 HOH HOH 591 A HOH 92 4 HOH HOH 592 A HOH 93 4 HOH HOH 593 A HOH 94 4 HOH HOH 594 A HOH 95 4 HOH HOH 595 A HOH 96 4 HOH HOH 596 A HOH 97 4 HOH HOH 597 A HOH 98 4 HOH HOH 598 A HOH 99 4 HOH HOH 599 A HOH 100 4 HOH HOH 600 A HOH 101 4 HOH HOH 601 A HOH 102 4 HOH HOH 602 A HOH 103 4 HOH HOH 603 A HOH 104 4 HOH HOH 604 A HOH 105 4 HOH HOH 605 A HOH 106 4 HOH HOH 606 A HOH 107 4 HOH HOH 607 A HOH 108 4 HOH HOH 608 A HOH 109 4 HOH HOH 609 A HOH 110 4 HOH HOH 610 A HOH 111 4 HOH HOH 611 A HOH 112 4 HOH HOH 612 A HOH 113 4 HOH HOH 613 A HOH 114 4 HOH HOH 614 A HOH 115 4 HOH HOH 615 A HOH 116 4 HOH HOH 616 A HOH 117 4 HOH HOH 617 A HOH 118 4 HOH HOH 618 A HOH 119 4 HOH HOH 619 A HOH 120 4 HOH HOH 620 A HOH 121 4 HOH HOH 621 A HOH 122 4 HOH HOH 622 A HOH 123 4 HOH HOH 623 A HOH 124 4 HOH HOH 624 A HOH 125 4 HOH HOH 625 A HOH 126 4 HOH HOH 626 A HOH 127 4 HOH HOH 627 A 1.520 1.000 2.36 50.00 0.100 0.100 0.000 0.000 11622 1920 2.210 1.000 0.500 0.200 0.000 0.000 33 38 1.320 1.000 0.400 0.300 0.000 0.000 177 92 1.980 1.000 0.400 0.200 0.000 0.000 457 161 1.330 1.000 0.200 0.200 0.000 0.000 867 218 1.160 1.000 0.200 0.100 0.000 0.000 1404 273 1.340 1.000 0.100 0.100 0.000 0.000 2062 324 1.840 1.000 0.100 0.000 0.000 0.000 2856 380 2.330 1.000 0.100 0.000 0.000 0.000 3766 434 Se 44.0586 -0.112 -0.856 -0.149 6.244 0.000 Se 41.4825 0.189 -1.000 -0.277 5.202 0.000 Se 35.6817 0.076 -0.853 -0.266 4.011 0.000 Se 37.8639 0.120 -0.972 -0.205 4.047 0.000 Se 37.7091 0.310 -0.800 -0.345 2.511 0.000 Se 45.0738 0.466 -0.819 -0.336 2.310 0.000 Se 75.5197 -0.160 -0.777 -0.212 3.949 0.000 Se 63.6299 0.196 -1.089 -0.230 2.163 0.000 Se 81.5690 -0.020 -0.994 -0.320 1.959 0.000 0.178 0.383 0.000 71 33 38 0.284 0.431 0.000 269 177 92 0.395 0.534 0.000 618 457 161 0.384 0.480 0.000 1085 867 218 0.342 0.408 0.000 1677 1404 273 0.328 0.380 0.000 2386 2062 324 0.254 0.288 0.000 3236 2856 380 0.198 0.221 0.000 4200 3766 434 Solvent flattening and Histogram matching 27132 65.000 0.686 502 64.600 0.808 509 63.300 0.816 520 63.100 0.851 572 65.400 0.849 641 67.100 0.835 690 67.000 0.821 727 67.700 0.801 781 67.800 0.784 827 73.600 0.748 845 72.200 0.733 890 71.400 0.730 926 70.500 0.720 952 73.300 0.687 994 74.400 0.721 1040 73.600 0.681 1036 77.500 0.687 1093 89.600 0.675 1093 90.600 0.668 1151 90.900 0.669 1164 92.200 0.642 1188 91.000 0.635 1203 89.100 0.594 1257 91.300 0.595 1254 87.700 0.537 1276 88.800 0.527 1299 89.700 0.503 1350 92.200 0.396 1352 n 1 24 A n 2 25 A ALA 26 n 3 ALA 26 A GLU 27 n 4 GLU 27 A THR 28 n 5 THR 28 A ASN 29 n 6 ASN 29 A GLU 30 n 7 GLU 30 A ILE 31 n 8 ILE 31 A THR 32 n 9 THR 32 A ILE 33 n 10 ILE 33 A GLY 34 n 11 GLY 34 A ILE 35 n 12 ILE 35 A THR 36 n 13 THR 36 A VAL 37 n 14 VAL 37 A THR 38 n 15 THR 38 A THR 39 n 16 THR 39 A THR 40 n 17 THR 40 A GLY 41 n 18 GLY 41 A PRO 42 n 19 PRO 42 A ALA 43 n 20 ALA 43 A ALA 44 n 21 ALA 44 A ALA 45 n 22 ALA 45 A LEU 46 n 23 LEU 46 A GLY 47 n 24 GLY 47 A ILE 48 n 25 ILE 48 A PRO 49 n 26 PRO 49 A GLU 50 n 27 GLU 50 A ARG 51 n 28 ARG 51 A ASN 52 n 29 ASN 52 A ALA 53 n 30 ALA 53 A LEU 54 n 31 LEU 54 A GLU 55 n 32 GLU 55 A PHE 56 n 33 PHE 56 A VAL 57 n 34 VAL 57 A ALA 58 n 35 ALA 58 A LYS 59 n 36 LYS 59 A GLU 60 n 37 GLU 60 A ILE 61 n 38 ILE 61 A GLY 62 n 39 GLY 62 A GLY 63 n 40 GLY 63 A HIS 64 n 41 HIS 64 A PRO 65 n 42 PRO 65 A LEU 66 n 43 LEU 66 A LYS 67 n 44 LYS 67 A VAL 68 n 45 VAL 68 A ILE 69 n 46 ILE 69 A VAL 70 n 47 VAL 70 A LEU 71 n 48 LEU 71 A ASP 72 n 49 ASP 72 A ASP 73 n 50 ASP 73 A GLY 74 n 51 GLY 74 A GLY 75 n 52 GLY 75 A ASP 76 n 53 ASP 76 A PRO 77 n 54 PRO 77 A THR 78 n 55 THR 78 A ALA 79 n 56 ALA 79 A ALA 80 n 57 ALA 80 A THR 81 n 58 THR 81 A THR 82 n 59 THR 82 A ASN 83 n 60 ASN 83 A ALA 84 n 61 ALA 84 A ARG 85 n 62 ARG 85 A ARG 86 n 63 ARG 86 A PHE 87 n 64 PHE 87 A VAL 88 n 65 VAL 88 A THR 89 n 66 THR 89 A GLU 90 n 67 GLU 90 A SER 91 n 68 SER 91 A LYS 92 n 69 LYS 92 A ALA 93 n 70 ALA 93 A ASP 94 n 71 ASP 94 A VAL 95 n 72 VAL 95 A ILE 96 n 73 ILE 96 A MSE 97 n 74 MSE 97 A GLY 98 n 75 GLY 98 A SER 99 n 76 SER 99 A SER 100 n 77 SER 100 A VAL 101 n 78 VAL 101 A THR 102 n 79 THR 102 A PRO 103 n 80 PRO 103 A PRO 104 n 81 PRO 104 A THR 105 n 82 THR 105 A VAL 106 n 83 VAL 106 A ALA 107 n 84 ALA 107 A VAL 108 n 85 VAL 108 A SER 109 n 86 SER 109 A ASN 110 n 87 ASN 110 A VAL 111 n 88 VAL 111 A ALA 112 n 89 ALA 112 A ASN 113 n 90 ASN 113 A GLU 114 n 91 GLU 114 A ALA 115 n 92 ALA 115 A GLN 116 n 93 GLN 116 A VAL 117 n 94 VAL 117 A PRO 118 n 95 PRO 118 A HIS 119 n 96 HIS 119 A ILE 120 n 97 ILE 120 A ALA 121 n 98 ALA 121 A LEU 122 n 99 LEU 122 A ALA 123 n 100 ALA 123 A PRO 124 n 101 PRO 124 A LEU 125 n 102 LEU 125 A PRO 126 n 103 PRO 126 A ILE 127 n 104 ILE 127 A THR 128 n 105 THR 128 A PRO 129 n 106 PRO 129 A GLU 130 n 107 GLU 130 A ARG 131 n 108 ARG 131 A ALA 132 n 109 ALA 132 A LYS 133 n 110 LYS 133 A TRP 134 n 111 TRP 134 A SER 135 n 112 SER 135 A VAL 136 n 113 VAL 136 A ALA 137 n 114 ALA 137 A MSE 138 n 115 MSE 138 A PRO 139 n 116 PRO 139 A GLN 140 n 117 GLN 140 A PRO 141 n 118 PRO 141 A ILE 142 n 119 ILE 142 A PRO 143 n 120 PRO 143 A ILE 144 n 121 ILE 144 A MSE 145 n 122 MSE 145 A GLY 146 n 123 GLY 146 A LYS 147 n 124 LYS 147 A VAL 148 n 125 VAL 148 A LEU 149 n 126 LEU 149 A TYR 150 n 127 TYR 150 A GLU 151 n 128 GLU 151 A HIS 152 n 129 HIS 152 A MSE 153 n 130 MSE 153 A LYS 154 n 131 LYS 154 A LYS 155 n 132 LYS 155 A ASN 156 n 133 ASN 156 A ASN 157 n 134 ASN 157 A ILE 158 n 135 ILE 158 A LYS 159 n 136 LYS 159 A THR 160 n 137 THR 160 A VAL 161 n 138 VAL 161 A GLY 162 n 139 GLY 162 A TYR 163 n 140 TYR 163 A ILE 164 n 141 ILE 164 A GLY 165 n 142 GLY 165 A TYR 166 n 143 TYR 166 A SER 167 n 144 SER 167 A ASP 168 n 145 ASP 168 A SER 169 n 146 SER 169 A TYR 170 n 147 TYR 170 A GLY 171 n 148 GLY 171 A ASP 172 n 149 ASP 172 A LEU 173 n 150 LEU 173 A TRP 174 n 151 TRP 174 A PHE 175 n 152 PHE 175 A ASN 176 n 153 ASN 176 A ASP 177 n 154 ASP 177 A LEU 178 n 155 LEU 178 A LYS 179 n 156 LYS 179 A LYS 180 n 157 LYS 180 A GLN 181 n 158 GLN 181 A GLY 182 n 159 GLY 182 A GLU 183 n 160 GLU 183 A ALA 184 n 161 ALA 184 A MSE 185 n 162 MSE 185 A GLY 186 n 163 GLY 186 A LEU 187 n 164 LEU 187 A LYS 188 n 165 LYS 188 A ILE 189 n 166 ILE 189 A VAL 190 n 167 VAL 190 A ALA 191 n 168 ALA 191 A GLU 192 n 169 GLU 192 A GLU 193 n 170 GLU 193 A ARG 194 n 171 ARG 194 A PHE 195 n 172 PHE 195 A ALA 196 n 173 ALA 196 A ARG 197 n 174 ARG 197 A PRO 198 n 175 PRO 198 A ASP 199 n 176 ASP 199 A THR 200 n 177 THR 200 A SER 201 n 178 SER 201 A VAL 202 n 179 VAL 202 A ALA 203 n 180 ALA 203 A GLY 204 n 181 GLY 204 A GLN 205 n 182 GLN 205 A VAL 206 n 183 VAL 206 A LEU 207 n 184 LEU 207 A LYS 208 n 185 LYS 208 A LEU 209 n 186 LEU 209 A VAL 210 n 187 VAL 210 A ALA 211 n 188 ALA 211 A ALA 212 n 189 ALA 212 A ASN 213 n 190 ASN 213 A PRO 214 n 191 PRO 214 A ASP 215 n 192 ASP 215 A ALA 216 n 193 ALA 216 A ILE 217 n 194 ILE 217 A LEU 218 n 195 LEU 218 A VAL 219 n 196 VAL 219 A GLY 220 n 197 GLY 220 A ALA 221 n 198 ALA 221 A SER 222 n 199 SER 222 A GLY 223 n 200 GLY 223 A THR 224 n 201 THR 224 A ALA 225 n 202 ALA 225 A ALA 226 n 203 ALA 226 A ALA 227 n 204 ALA 227 A LEU 228 n 205 LEU 228 A PRO 229 n 206 PRO 229 A GLN 230 n 207 GLN 230 A THR 231 n 208 THR 231 A SER 232 n 209 SER 232 A LEU 233 n 210 LEU 233 A ARG 234 n 211 ARG 234 A GLU 235 n 212 GLU 235 A ARG 236 n 213 ARG 236 A GLY 237 n 214 GLY 237 A TYR 238 n 215 TYR 238 A LYS 239 n 216 LYS 239 A GLY 240 n 217 GLY 240 A LEU 241 n 218 LEU 241 A ILE 242 n 219 ILE 242 A TYR 243 n 220 TYR 243 A GLN 244 n 221 GLN 244 A THR 245 n 222 THR 245 A HIS 246 n 223 HIS 246 A GLY 247 n 224 GLY 247 A ALA 248 n 225 ALA 248 A ALA 249 n 226 ALA 249 A SER 250 n 227 SER 250 A MSE 251 n 228 MSE 251 A ASP 252 n 229 ASP 252 A PHE 253 n 230 PHE 253 A ILE 254 n 231 ILE 254 A ARG 255 n 232 ARG 255 A ILE 256 n 233 ILE 256 A ALA 257 n 234 ALA 257 A GLY 258 n 235 GLY 258 A LYS 259 n 236 LYS 259 A SER 260 n 237 SER 260 A ALA 261 n 238 ALA 261 A GLU 262 n 239 GLU 262 A GLY 263 n 240 GLY 263 A VAL 264 n 241 VAL 264 A LEU 265 n 242 LEU 265 A MSE 266 n 243 MSE 266 A ALA 267 n 244 ALA 267 A SER 268 n 245 SER 268 A GLY 269 n 246 GLY 269 A PRO 270 n 247 PRO 270 A VAL 271 n 248 VAL 271 A MSE 272 n 249 MSE 272 A ASP 273 n 250 ASP 273 A PRO 274 n 251 PRO 274 A GLU 275 n 252 GLU 275 A GLY 276 n 253 GLY 276 A GLN 277 n 254 GLN 277 A ASP 278 n 255 ASP 278 A ASP 279 n 256 ASP 279 A SER 280 n 257 SER 280 A ALA 281 n 258 ALA 281 A LEU 282 n 259 LEU 282 A THR 283 n 260 THR 283 A LYS 284 n 261 LYS 284 A LYS 285 n 262 LYS 285 A PRO 286 n 263 PRO 286 A GLY 287 n 264 GLY 287 A LEU 288 n 265 LEU 288 A GLU 289 n 266 GLU 289 A LEU 290 n 267 LEU 290 A ASN 291 n 268 ASN 291 A THR 292 n 269 THR 292 A ALA 293 n 270 ALA 293 A TYR 294 n 271 TYR 294 A GLU 295 n 272 GLU 295 A ALA 296 n 273 ALA 296 A LYS 297 n 274 LYS 297 A TYR 298 n 275 TYR 298 A GLY 299 n 276 GLY 299 A PRO 300 n 277 PRO 300 A ASN 301 n 278 ASN 301 A SER 302 n 279 SER 302 A ARG 303 n 280 ARG 303 A SER 304 n 281 SER 304 A GLN 305 n 282 GLN 305 A PHE 306 n 283 PHE 306 A ALA 307 n 284 ALA 307 A ALA 308 n 285 ALA 308 A HIS 309 n 286 HIS 309 A SER 310 n 287 SER 310 A PHE 311 n 288 PHE 311 A ASP 312 n 289 ASP 312 A ALA 313 n 290 ALA 313 A PHE 314 n 291 PHE 314 A LYS 315 n 292 LYS 315 A VAL 316 n 293 VAL 316 A LEU 317 n 294 LEU 317 A GLU 318 n 295 GLU 318 A ARG 319 n 296 ARG 319 A VAL 320 n 297 VAL 320 A VAL 321 n 298 VAL 321 A PRO 322 n 299 PRO 322 A VAL 323 n 300 VAL 323 A ALA 324 n 301 ALA 324 A LEU 325 n 302 LEU 325 A LYS 326 n 303 LYS 326 A THR 327 n 304 THR 327 A ALA 328 n 305 ALA 328 A LYS 329 n 306 LYS 329 A PRO 330 n 307 PRO 330 A GLY 331 n 308 GLY 331 A THR 332 n 309 THR 332 A GLN 333 n 310 GLN 333 A GLU 334 n 311 GLU 334 A PHE 335 n 312 PHE 335 A ARG 336 n 313 ARG 336 A GLU 337 n 314 GLU 337 A ALA 338 n 315 ALA 338 A ILE 339 n 316 ILE 339 A ARG 340 n 317 ARG 340 A LYS 341 n 318 LYS 341 A ALA 342 n 319 ALA 342 A LEU 343 n 320 LEU 343 A VAL 344 n 321 VAL 344 A SER 345 n 322 SER 345 A GLU 346 n 323 GLU 346 A LYS 347 n 324 LYS 347 A ASP 348 n 325 ASP 348 A ILE 349 n 326 ILE 349 A ALA 350 n 327 ALA 350 A ALA 351 n 328 ALA 351 A SER 352 n 329 SER 352 A GLN 353 n 330 GLN 353 A GLY 354 n 331 GLY 354 A VAL 355 n 332 VAL 355 A TYR 356 n 333 TYR 356 A SER 357 n 334 SER 357 A PHE 358 n 335 PHE 358 A THR 359 n 336 THR 359 A GLU 360 n 337 GLU 360 A THR 361 n 338 THR 361 A ASP 362 n 339 ASP 362 A ARG 363 n 340 ARG 363 A TYR 364 n 341 TYR 364 A GLY 365 n 342 GLY 365 A LEU 366 n 343 LEU 366 A ASP 367 n 344 ASP 367 A ASP 368 n 345 ASP 368 A ARG 369 n 346 ARG 369 A SER 370 n 347 SER 370 A ARG 371 n 348 ARG 371 A ILE 372 n 349 ILE 372 A LEU 373 n 350 LEU 373 A LEU 374 n 351 LEU 374 A THR 375 n 352 THR 375 A VAL 376 n 353 VAL 376 A LYS 377 n 354 LYS 377 A ASP 378 n 355 ASP 378 A GLY 379 n 356 GLY 379 A LYS 380 n 357 LYS 380 A TYR 381 n 358 TYR 381 A VAL 382 n 359 VAL 382 A MSE 383 n 360 MSE 383 A VAL 384 n 361 VAL 384 A LYS 385 n 362 LYS 385 A 0.6596 0.2270 0.1868 1.2836 0.5146 0.9563 0.0185 -0.0627 0.0147 0.0617 0.0519 -0.1527 -0.0151 0.0400 -0.0705 0.0107 0.0031 -0.0044 0.0177 -0.0156 0.0275 refined 11.9476 60.1327 22.4573 X-RAY DIFFRACTION A 26 A 385 X-RAY DIFFRACTION 1 software_defined_assembly PISA 1 monomeric A MSE 97 SELENOMETHIONINE A MSE 74 MET A MSE 138 SELENOMETHIONINE A MSE 115 MET A MSE 145 SELENOMETHIONINE A MSE 122 MET A MSE 153 SELENOMETHIONINE A MSE 130 MET A MSE 185 SELENOMETHIONINE A MSE 162 MET A MSE 251 SELENOMETHIONINE A MSE 228 MET A MSE 266 SELENOMETHIONINE A MSE 243 MET A MSE 272 SELENOMETHIONINE A MSE 249 MET A MSE 383 SELENOMETHIONINE A MSE 360 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 61 A N ILE 38 A O HIS 64 A O HIS 41 A O ILE 69 A O ILE 46 A N ILE 35 A N ILE 12 A N GLY 34 A N GLY 11 A O MSE 97 A O MSE 74 A N ILE 96 A N ILE 73 A O ILE 120 A O ILE 97 A N ALA 121 A N ALA 98 A O VAL 136 A O VAL 113 A O LYS 188 A O LYS 165 A N VAL 161 A N VAL 138 A N ILE 164 A N ILE 141 A O GLY 220 A O GLY 197 A N ILE 217 A N ILE 194 A O TYR 243 A O TYR 220 A N GLN 244 A N GLN 221 A O LEU 265 A O LEU 242 A N MSE 266 A N MSE 243 A O LEU 374 A O LEU 351 A N THR 375 A N THR 352 A O VAL 382 A O VAL 359 A N ILE 349 A N ILE 326 A O TYR 356 A O TYR 333 1 A CG GLU 27 A CG GLU 4 1 Y 1 A CD GLU 27 A CD GLU 4 1 Y 1 A OE1 GLU 27 A OE1 GLU 4 1 Y 1 A OE2 GLU 27 A OE2 GLU 4 1 Y 1 A CG LYS 385 A CG LYS 362 1 Y 1 A CD LYS 385 A CD LYS 362 1 Y 1 A CE LYS 385 A CE LYS 362 1 Y 1 A NZ LYS 385 A NZ LYS 362 1 Y 1 A SER 24 A SER 1 1 Y 1 A ASN 25 A ASN 2 1 Y 1 -4.70 0.50 120.30 115.60 A A A NE CZ NH1 ARG ARG ARG 336 336 336 N 1 4.02 0.50 120.30 124.32 A A A NE CZ NH2 ARG ARG ARG 336 336 336 N 1 A A CG CD2 HIS HIS 246 246 0.056 0.009 1.354 1.410 N 1 A SER 99 -108.37 -158.41 1 A ASP 273 -150.12 63.37 2.36 50.00 0.278 0.324 0.000 13542 11622 1920 77.850 24.1958 9.720 -0.1600 0.0000 0.0000 0.6600 0.0000 -0.5000 0.9620 0.9410 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED 0.2133 0.1661 0.1685 0.1685 1.8500 35.5300 1290 25528 25528 5.1000 91.7200 0.2184 0.1689 1.000 0.500 0.8801 5.9000 0.0880 0.1516 0.1417 RANDOM 1 THROUGHOUT 0.000 SAD 0.1520 0.1420 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD WITH PHASES MASK 1.8500 35.5300 127 2845 19 0 2699 0.015 0.020 2774 0.002 0.020 1872 1.594 1.982 3766 1.036 3.000 4596 5.537 5.000 361 32.801 24.286 105 13.594 15.000 463 16.610 15.000 16 0.095 0.200 435 0.009 0.021 3091 0.009 0.020 525 0.2420 0.1820 1.8980 44 1181 1225 20 63.3100 17.4 1.850 50.000 4FB4 27597 27597 -3 0.085 0.917 1 9.200 7.800 98.900 0.684 1.850 1.880 1343 0.803 1 7.500 96.600 0.651 1.880 1.920 1352 0.857 1 7.600 99.300 0.580 1.920 1.950 1330 0.849 1 7.700 97.600 0.437 1.950 1.990 1359 0.846 1 7.900 98.900 0.418 1.990 2.040 1341 0.921 1 7.900 98.100 0.346 2.040 2.080 1352 0.917 1 8.000 99.200 0.290 2.080 2.140 1357 0.921 1 8.000 97.900 0.240 2.140 2.190 1375 0.933 1 8.100 100.000 0.215 2.190 2.260 1347 0.952 1 8.000 98.200 0.184 2.260 2.330 1375 0.972 1 8.000 98.900 0.156 2.330 2.410 1370 0.934 1 8.000 99.700 0.133 2.410 2.510 1377 0.931 1 8.000 98.800 0.118 2.510 2.630 1367 0.962 1 8.000 99.100 0.103 2.630 2.760 1383 0.983 1 8.000 99.300 0.088 2.760 2.940 1388 1.005 1 8.000 99.400 0.080 2.940 3.160 1390 1.023 1 7.900 99.600 0.068 3.160 3.480 1418 1.049 1 7.800 99.600 0.058 3.480 3.990 1422 0.978 1 7.600 99.500 0.052 3.990 5.020 1442 0.799 1 7.300 99.700 0.048 5.020 50.000 1509 0.659 1 7.000 98.100 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Eleanor J. Dodson ccp4@ccp4.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/mlphare.html MLPHARE other phasing Kevin Cowtan kowtan@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/dm.html DM program 6.1 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection SBC-Collect data reduction HKL-3000 data scaling HKL-3000 phasing HKL-3000 phasing SHELXD model building SHELXE phasing SOLVE phasing RESOLVE model building ARP/wARP phasing CCP4 model building O model building Coot Putative branched-chain amino acid transport system substrate-binding protein The Structure of an ABC-Transporter Family Protein from Rhodopseudomonas palustris in Complex with Caffeic Acid 1 N N 2 N N 3 N N 4 N N THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. A ALA 43 A ALA 20 HELX_P A LEU 54 A LEU 31 1 1 12 A GLU 55 A GLU 32 HELX_P A VAL 57 A VAL 34 5 2 3 A ASP 76 A ASP 53 HELX_P A GLU 90 A GLU 67 1 3 15 A VAL 101 A VAL 78 HELX_P A GLN 116 A GLN 93 1 4 16 A THR 128 A THR 105 HELX_P A LYS 133 A LYS 110 1 5 6 A PRO 141 A PRO 118 HELX_P A ASN 156 A ASN 133 1 6 16 A ASP 168 A ASP 145 HELX_P A MSE 185 A MSE 162 1 7 18 A VAL 202 A VAL 179 HELX_P A ASN 213 A ASN 190 1 8 12 A SER 222 A SER 199 HELX_P A ARG 236 A ARG 213 1 9 15 A HIS 246 A HIS 223 HELX_P A ALA 249 A ALA 226 5 10 4 A SER 250 A SER 227 HELX_P A GLY 258 A GLY 235 1 11 9 A LYS 259 A LYS 236 HELX_P A GLU 262 A GLU 239 5 12 4 A GLY 269 A GLY 246 HELX_P A GLN 277 A GLN 254 5 13 9 A THR 283 A THR 260 HELX_P A GLY 299 A GLY 276 1 14 17 A SER 304 A SER 281 HELX_P A LYS 326 A LYS 303 1 15 23 A THR 332 A THR 309 HELX_P A GLU 346 A GLU 323 1 16 15 A ASP 367 A ASP 344 HELX_P A ARG 371 A ARG 348 5 17 5 covale 1.310 A ILE 96 A C ILE 73 1_555 A MSE 97 A N MSE 74 1_555 covale 1.321 A MSE 97 A C MSE 74 1_555 A GLY 98 A N GLY 75 1_555 covale 1.325 A ALA 137 A C ALA 114 1_555 A MSE 138 A N MSE 115 1_555 covale 1.367 A MSE 138 A C MSE 115 1_555 A PRO 139 A N PRO 116 1_555 covale 1.322 A ILE 144 A C ILE 121 1_555 A MSE 145 A N MSE 122 1_555 covale 1.327 A MSE 145 A C MSE 122 1_555 A GLY 146 A N GLY 123 1_555 covale 1.321 A HIS 152 A C HIS 129 1_555 A MSE 153 A N MSE 130 1_555 covale 1.334 A MSE 153 A C MSE 130 1_555 A LYS 154 A N LYS 131 1_555 covale 1.341 A ALA 184 A C ALA 161 1_555 A MSE 185 A N MSE 162 1_555 covale 1.333 A MSE 185 A C MSE 162 1_555 A GLY 186 A N GLY 163 1_555 covale 1.330 A SER 250 A C SER 227 1_555 A MSE 251 A N MSE 228 1_555 covale 1.334 A MSE 251 A C MSE 228 1_555 A ASP 252 A N ASP 229 1_555 covale 1.334 A LEU 265 A C LEU 242 1_555 A MSE 266 A N MSE 243 1_555 covale 1.323 A MSE 266 A C MSE 243 1_555 A ALA 267 A N ALA 244 1_555 covale 1.324 A VAL 271 A C VAL 248 1_555 A MSE 272 A N MSE 249 1_555 covale 1.338 A MSE 272 A C MSE 249 1_555 A ASP 273 A N ASP 250 1_555 covale 1.327 A VAL 382 A C VAL 359 1_555 A MSE 383 A N MSE 360 1_555 covale 1.332 A MSE 383 A C MSE 360 1_555 A VAL 384 A N VAL 361 1_555 SIGNALING PROTEIN Structural Genomics, PSI-Biology, alpha/beta, aromatic compound transport, aromatic compounds, SIGNALING PROTEIN, Midwest Center for Structural Genomics, MCSG A GLY 98 A GLY 75 1 A SER 99 A SER 76 -0.40 Q6N8W4_RHOPA UNP 1 26 Q6N8W4 AETNEITIGITVTTTGPAAALGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTPPT VAVSNVANEAQVPHIALAPLPITPERAKWSVAMPQPIPIMGKVLYEHMKKNNIKTVGYIGYSDSYGDLWFNDLKKQGEAM GLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALPQTSLRERGYKGLIYQTHGAASMDFIRIAGKSAEGVL MASGPVMDPEGQDDSALTKKPGLELNTAYEAKYGPNSRSQFAAHSFDAFKVLERVVPVALKTAKPGTQEFREAIRKALVS EKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYVMVK 26 385 4FB4 26 385 Q6N8W4 A 1 3 362 1 EXPRESSION TAG SER 24 4FB4 A Q6N8W4 UNP 1 1 EXPRESSION TAG ASN 25 4FB4 A Q6N8W4 UNP 2 6 7 2 anti-parallel parallel parallel parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel A GLU 60 A GLU 37 A ILE 61 A ILE 38 A HIS 64 A HIS 41 A ASP 72 A ASP 49 A ILE 31 A ILE 8 A VAL 37 A VAL 14 A VAL 95 A VAL 72 A GLY 98 A GLY 75 A HIS 119 A HIS 96 A ALA 121 A ALA 98 A SER 135 A SER 112 A ALA 137 A ALA 114 A LYS 188 A LYS 165 A PHE 195 A PHE 172 A THR 160 A THR 137 A TYR 166 A TYR 143 A ALA 216 A ALA 193 A GLY 220 A GLY 197 A LEU 241 A LEU 218 A GLN 244 A GLN 221 A LEU 265 A LEU 242 A SER 268 A SER 245 A ILE 372 A ILE 349 A LYS 377 A LYS 354 A LYS 380 A LYS 357 A MSE 383 A MSE 360 A ILE 349 A ILE 326 A ALA 350 A ALA 327 A VAL 355 A VAL 332 A TYR 356 A TYR 333 BINDING SITE FOR RESIDUE DHC A 401 Software 15 BINDING SITE FOR RESIDUE GOL A 402 Software 8 A LEU 46 A LEU 23 15 1_555 A VAL 101 A VAL 78 15 1_555 A THR 102 A THR 79 15 1_555 A LEU 122 A LEU 99 15 1_555 A PRO 124 A PRO 101 15 1_555 A PRO 139 A PRO 116 15 1_555 A TYR 170 A TYR 147 15 1_555 A ARG 197 A ARG 174 15 1_555 A SER 222 A SER 199 15 1_555 A HIS 246 A HIS 223 15 1_555 A GLY 247 A GLY 224 15 1_555 A GLN 305 A GLN 282 15 1_555 A PHE 306 A PHE 283 15 1_555 A HIS 309 A HIS 286 15 1_555 A HOH 501 D HOH 15 1_555 A PRO 42 A PRO 19 8 1_555 A TYR 166 A TYR 143 8 1_555 A ARG 197 A ARG 174 8 1_555 A SER 222 A SER 199 8 1_555 A GLY 223 A GLY 200 8 1_555 A THR 224 A THR 201 8 1_555 A ALA 225 A ALA 202 8 1_555 A HOH 507 D HOH 8 1_555 19 P 21 21 21