0.020414
0.000000
0.000000
0.000000
0.014074
0.000000
0.000000
0.000000
0.010987
0.000000
0.000000
0.000000
Cuff, M.E.
Mack, J.C.
Zerbs, S.
Collart, F.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
48.986
71.055
91.015
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H8 O4
180.157
CAFFEIC ACID
3,4-DIHYDROXYCINNAMIC ACID
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proteins
PSFGEY
0867
0887-3585
81
1709
1726
10.1002/prot.24305
23606130
Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
2013
100
1
CCD
2012-02-04
ADSC QUANTUM 315r
SAGITALLY FOCUSED Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.97929
1.0
22.29
215442
0.085
0.92
1.850
50.000
27597
98.90
7.80
19-ID
APS
0.97929
SYNCHROTRON
APS BEAMLINE 19-ID
39155.152
Putative branched-chain amino acid transport system substrate-binding protein
1
man
polymer
180.157
CAFFEIC ACID
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
127
nat
water
no
yes
SNAETNEITIGITVTTTGPAAALGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVI(MSE)GS
SVTPPTVAVSNVANEAQVPHIALAPLPITPERAKWSVA(MSE)PQPIPI(MSE)GKVLYEH(MSE)KKNNIKTVGYIGYS
DSYGDLWFNDLKKQGEA(MSE)GLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALPQTSLRERGYKGLIY
QTHGAAS(MSE)DFIRIAGKSAEGVL(MSE)ASGPV(MSE)DPEGQDDSALTKKPGLELNTAYEAKYGPNSRSQFAAHSF
DAFKVLERVVPVALKTAKPGTQEFREAIRKALVSEKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYV(MSE)VK
SNAETNEITIGITVTTTGPAAALGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTP
PTVAVSNVANEAQVPHIALAPLPITPERAKWSVAMPQPIPIMGKVLYEHMKKNNIKTVGYIGYSDSYGDLWFNDLKKQGE
AMGLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALPQTSLRERGYKGLIYQTHGAASMDFIRIAGKSAEG
VLMASGPVMDPEGQDDSALTKKPGLELNTAYEAKYGPNSRSQFAAHSFDAFKVLERVVPVALKTAKPGTQEFREAIRKAL
VSEKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYVMVK
A
MCSG-apc102206
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CGA009
sample
LivK, RPA1789
258594
Rhodopseudomonas palustris
562
Escherichia coli
BL21(DE3)magic
plasmid
pMCSG7
1
2.02
39.19
VAPOR DIFFUSION, SITTING DROP
6.5
0.1M MES:NaOH pH 6.5, 30% PEG 4K, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Midwest Center for Structural Genomics
MCSG
PSI:Biology
software
repository
Initial release
Database references
Database references
Database references
Database references
Refinement description
1
0
2012-09-26
1
1
2013-05-15
1
2
2013-07-24
1
3
2013-08-07
1
4
2013-09-25
1
5
2017-11-15
same in complex with 3,4-hydoxyphenyl pyruvate
same in complex with p-coumarate
Y
RCSB
Y
RCSB
2012-05-22
REL
REL
0.048
0.659
98.10
7.00
0.052
0.799
99.70
7.30
0.058
0.978
99.50
7.60
0.068
1.049
99.60
7.80
0.080
1.023
99.60
7.90
0.088
1.005
99.40
8.00
0.103
0.983
99.30
8.00
0.118
0.962
99.10
8.00
0.133
0.931
98.80
8.00
0.156
0.934
99.70
8.00
0.184
0.972
98.90
8.00
0.215
0.952
98.20
8.00
0.240
0.933
100.00
8.10
0.290
0.921
97.90
8.00
0.346
0.917
99.20
8.00
0.418
0.921
98.10
7.90
0.437
0.846
98.90
7.90
0.580
0.849
97.60
7.70
0.651
0.857
99.30
7.60
0.684
0.803
96.60
7.50
DHC
CAFFEIC ACID
GOL
GLYCEROL
HOH
water
DHC
1
2
DHC
DHC
401
A
GOL
1
3
GOL
GOL
402
A
HOH
1
4
HOH
HOH
501
A
HOH
2
4
HOH
HOH
502
A
HOH
3
4
HOH
HOH
503
A
HOH
4
4
HOH
HOH
504
A
HOH
5
4
HOH
HOH
505
A
HOH
6
4
HOH
HOH
506
A
HOH
7
4
HOH
HOH
507
A
HOH
8
4
HOH
HOH
508
A
HOH
9
4
HOH
HOH
509
A
HOH
10
4
HOH
HOH
510
A
HOH
11
4
HOH
HOH
511
A
HOH
12
4
HOH
HOH
512
A
HOH
13
4
HOH
HOH
513
A
HOH
14
4
HOH
HOH
514
A
HOH
15
4
HOH
HOH
515
A
HOH
16
4
HOH
HOH
516
A
HOH
17
4
HOH
HOH
517
A
HOH
18
4
HOH
HOH
518
A
HOH
19
4
HOH
HOH
519
A
HOH
20
4
HOH
HOH
520
A
HOH
21
4
HOH
HOH
521
A
HOH
22
4
HOH
HOH
522
A
HOH
23
4
HOH
HOH
523
A
HOH
24
4
HOH
HOH
524
A
HOH
25
4
HOH
HOH
525
A
HOH
26
4
HOH
HOH
526
A
HOH
27
4
HOH
HOH
527
A
HOH
28
4
HOH
HOH
528
A
HOH
29
4
HOH
HOH
529
A
HOH
30
4
HOH
HOH
530
A
HOH
31
4
HOH
HOH
531
A
HOH
32
4
HOH
HOH
532
A
HOH
33
4
HOH
HOH
533
A
HOH
34
4
HOH
HOH
534
A
HOH
35
4
HOH
HOH
535
A
HOH
36
4
HOH
HOH
536
A
HOH
37
4
HOH
HOH
537
A
HOH
38
4
HOH
HOH
538
A
HOH
39
4
HOH
HOH
539
A
HOH
40
4
HOH
HOH
540
A
HOH
41
4
HOH
HOH
541
A
HOH
42
4
HOH
HOH
542
A
HOH
43
4
HOH
HOH
543
A
HOH
44
4
HOH
HOH
544
A
HOH
45
4
HOH
HOH
545
A
HOH
46
4
HOH
HOH
546
A
HOH
47
4
HOH
HOH
547
A
HOH
48
4
HOH
HOH
548
A
HOH
49
4
HOH
HOH
549
A
HOH
50
4
HOH
HOH
550
A
HOH
51
4
HOH
HOH
551
A
HOH
52
4
HOH
HOH
552
A
HOH
53
4
HOH
HOH
553
A
HOH
54
4
HOH
HOH
554
A
HOH
55
4
HOH
HOH
555
A
HOH
56
4
HOH
HOH
556
A
HOH
57
4
HOH
HOH
557
A
HOH
58
4
HOH
HOH
558
A
HOH
59
4
HOH
HOH
559
A
HOH
60
4
HOH
HOH
560
A
HOH
61
4
HOH
HOH
561
A
HOH
62
4
HOH
HOH
562
A
HOH
63
4
HOH
HOH
563
A
HOH
64
4
HOH
HOH
564
A
HOH
65
4
HOH
HOH
565
A
HOH
66
4
HOH
HOH
566
A
HOH
67
4
HOH
HOH
567
A
HOH
68
4
HOH
HOH
568
A
HOH
69
4
HOH
HOH
569
A
HOH
70
4
HOH
HOH
570
A
HOH
71
4
HOH
HOH
571
A
HOH
72
4
HOH
HOH
572
A
HOH
73
4
HOH
HOH
573
A
HOH
74
4
HOH
HOH
574
A
HOH
75
4
HOH
HOH
575
A
HOH
76
4
HOH
HOH
576
A
HOH
77
4
HOH
HOH
577
A
HOH
78
4
HOH
HOH
578
A
HOH
79
4
HOH
HOH
579
A
HOH
80
4
HOH
HOH
580
A
HOH
81
4
HOH
HOH
581
A
HOH
82
4
HOH
HOH
582
A
HOH
83
4
HOH
HOH
583
A
HOH
84
4
HOH
HOH
584
A
HOH
85
4
HOH
HOH
585
A
HOH
86
4
HOH
HOH
586
A
HOH
87
4
HOH
HOH
587
A
HOH
88
4
HOH
HOH
588
A
HOH
89
4
HOH
HOH
589
A
HOH
90
4
HOH
HOH
590
A
HOH
91
4
HOH
HOH
591
A
HOH
92
4
HOH
HOH
592
A
HOH
93
4
HOH
HOH
593
A
HOH
94
4
HOH
HOH
594
A
HOH
95
4
HOH
HOH
595
A
HOH
96
4
HOH
HOH
596
A
HOH
97
4
HOH
HOH
597
A
HOH
98
4
HOH
HOH
598
A
HOH
99
4
HOH
HOH
599
A
HOH
100
4
HOH
HOH
600
A
HOH
101
4
HOH
HOH
601
A
HOH
102
4
HOH
HOH
602
A
HOH
103
4
HOH
HOH
603
A
HOH
104
4
HOH
HOH
604
A
HOH
105
4
HOH
HOH
605
A
HOH
106
4
HOH
HOH
606
A
HOH
107
4
HOH
HOH
607
A
HOH
108
4
HOH
HOH
608
A
HOH
109
4
HOH
HOH
609
A
HOH
110
4
HOH
HOH
610
A
HOH
111
4
HOH
HOH
611
A
HOH
112
4
HOH
HOH
612
A
HOH
113
4
HOH
HOH
613
A
HOH
114
4
HOH
HOH
614
A
HOH
115
4
HOH
HOH
615
A
HOH
116
4
HOH
HOH
616
A
HOH
117
4
HOH
HOH
617
A
HOH
118
4
HOH
HOH
618
A
HOH
119
4
HOH
HOH
619
A
HOH
120
4
HOH
HOH
620
A
HOH
121
4
HOH
HOH
621
A
HOH
122
4
HOH
HOH
622
A
HOH
123
4
HOH
HOH
623
A
HOH
124
4
HOH
HOH
624
A
HOH
125
4
HOH
HOH
625
A
HOH
126
4
HOH
HOH
626
A
HOH
127
4
HOH
HOH
627
A
1.520
1.000
2.36
50.00
0.100
0.100
0.000
0.000
11622
1920
2.210
1.000
0.500
0.200
0.000
0.000
33
38
1.320
1.000
0.400
0.300
0.000
0.000
177
92
1.980
1.000
0.400
0.200
0.000
0.000
457
161
1.330
1.000
0.200
0.200
0.000
0.000
867
218
1.160
1.000
0.200
0.100
0.000
0.000
1404
273
1.340
1.000
0.100
0.100
0.000
0.000
2062
324
1.840
1.000
0.100
0.000
0.000
0.000
2856
380
2.330
1.000
0.100
0.000
0.000
0.000
3766
434
Se
44.0586
-0.112
-0.856
-0.149
6.244
0.000
Se
41.4825
0.189
-1.000
-0.277
5.202
0.000
Se
35.6817
0.076
-0.853
-0.266
4.011
0.000
Se
37.8639
0.120
-0.972
-0.205
4.047
0.000
Se
37.7091
0.310
-0.800
-0.345
2.511
0.000
Se
45.0738
0.466
-0.819
-0.336
2.310
0.000
Se
75.5197
-0.160
-0.777
-0.212
3.949
0.000
Se
63.6299
0.196
-1.089
-0.230
2.163
0.000
Se
81.5690
-0.020
-0.994
-0.320
1.959
0.000
0.178
0.383
0.000
71
33
38
0.284
0.431
0.000
269
177
92
0.395
0.534
0.000
618
457
161
0.384
0.480
0.000
1085
867
218
0.342
0.408
0.000
1677
1404
273
0.328
0.380
0.000
2386
2062
324
0.254
0.288
0.000
3236
2856
380
0.198
0.221
0.000
4200
3766
434
Solvent flattening and Histogram matching
27132
65.000
0.686
502
64.600
0.808
509
63.300
0.816
520
63.100
0.851
572
65.400
0.849
641
67.100
0.835
690
67.000
0.821
727
67.700
0.801
781
67.800
0.784
827
73.600
0.748
845
72.200
0.733
890
71.400
0.730
926
70.500
0.720
952
73.300
0.687
994
74.400
0.721
1040
73.600
0.681
1036
77.500
0.687
1093
89.600
0.675
1093
90.600
0.668
1151
90.900
0.669
1164
92.200
0.642
1188
91.000
0.635
1203
89.100
0.594
1257
91.300
0.595
1254
87.700
0.537
1276
88.800
0.527
1299
89.700
0.503
1350
92.200
0.396
1352
n
1
24
A
n
2
25
A
ALA
26
n
3
ALA
26
A
GLU
27
n
4
GLU
27
A
THR
28
n
5
THR
28
A
ASN
29
n
6
ASN
29
A
GLU
30
n
7
GLU
30
A
ILE
31
n
8
ILE
31
A
THR
32
n
9
THR
32
A
ILE
33
n
10
ILE
33
A
GLY
34
n
11
GLY
34
A
ILE
35
n
12
ILE
35
A
THR
36
n
13
THR
36
A
VAL
37
n
14
VAL
37
A
THR
38
n
15
THR
38
A
THR
39
n
16
THR
39
A
THR
40
n
17
THR
40
A
GLY
41
n
18
GLY
41
A
PRO
42
n
19
PRO
42
A
ALA
43
n
20
ALA
43
A
ALA
44
n
21
ALA
44
A
ALA
45
n
22
ALA
45
A
LEU
46
n
23
LEU
46
A
GLY
47
n
24
GLY
47
A
ILE
48
n
25
ILE
48
A
PRO
49
n
26
PRO
49
A
GLU
50
n
27
GLU
50
A
ARG
51
n
28
ARG
51
A
ASN
52
n
29
ASN
52
A
ALA
53
n
30
ALA
53
A
LEU
54
n
31
LEU
54
A
GLU
55
n
32
GLU
55
A
PHE
56
n
33
PHE
56
A
VAL
57
n
34
VAL
57
A
ALA
58
n
35
ALA
58
A
LYS
59
n
36
LYS
59
A
GLU
60
n
37
GLU
60
A
ILE
61
n
38
ILE
61
A
GLY
62
n
39
GLY
62
A
GLY
63
n
40
GLY
63
A
HIS
64
n
41
HIS
64
A
PRO
65
n
42
PRO
65
A
LEU
66
n
43
LEU
66
A
LYS
67
n
44
LYS
67
A
VAL
68
n
45
VAL
68
A
ILE
69
n
46
ILE
69
A
VAL
70
n
47
VAL
70
A
LEU
71
n
48
LEU
71
A
ASP
72
n
49
ASP
72
A
ASP
73
n
50
ASP
73
A
GLY
74
n
51
GLY
74
A
GLY
75
n
52
GLY
75
A
ASP
76
n
53
ASP
76
A
PRO
77
n
54
PRO
77
A
THR
78
n
55
THR
78
A
ALA
79
n
56
ALA
79
A
ALA
80
n
57
ALA
80
A
THR
81
n
58
THR
81
A
THR
82
n
59
THR
82
A
ASN
83
n
60
ASN
83
A
ALA
84
n
61
ALA
84
A
ARG
85
n
62
ARG
85
A
ARG
86
n
63
ARG
86
A
PHE
87
n
64
PHE
87
A
VAL
88
n
65
VAL
88
A
THR
89
n
66
THR
89
A
GLU
90
n
67
GLU
90
A
SER
91
n
68
SER
91
A
LYS
92
n
69
LYS
92
A
ALA
93
n
70
ALA
93
A
ASP
94
n
71
ASP
94
A
VAL
95
n
72
VAL
95
A
ILE
96
n
73
ILE
96
A
MSE
97
n
74
MSE
97
A
GLY
98
n
75
GLY
98
A
SER
99
n
76
SER
99
A
SER
100
n
77
SER
100
A
VAL
101
n
78
VAL
101
A
THR
102
n
79
THR
102
A
PRO
103
n
80
PRO
103
A
PRO
104
n
81
PRO
104
A
THR
105
n
82
THR
105
A
VAL
106
n
83
VAL
106
A
ALA
107
n
84
ALA
107
A
VAL
108
n
85
VAL
108
A
SER
109
n
86
SER
109
A
ASN
110
n
87
ASN
110
A
VAL
111
n
88
VAL
111
A
ALA
112
n
89
ALA
112
A
ASN
113
n
90
ASN
113
A
GLU
114
n
91
GLU
114
A
ALA
115
n
92
ALA
115
A
GLN
116
n
93
GLN
116
A
VAL
117
n
94
VAL
117
A
PRO
118
n
95
PRO
118
A
HIS
119
n
96
HIS
119
A
ILE
120
n
97
ILE
120
A
ALA
121
n
98
ALA
121
A
LEU
122
n
99
LEU
122
A
ALA
123
n
100
ALA
123
A
PRO
124
n
101
PRO
124
A
LEU
125
n
102
LEU
125
A
PRO
126
n
103
PRO
126
A
ILE
127
n
104
ILE
127
A
THR
128
n
105
THR
128
A
PRO
129
n
106
PRO
129
A
GLU
130
n
107
GLU
130
A
ARG
131
n
108
ARG
131
A
ALA
132
n
109
ALA
132
A
LYS
133
n
110
LYS
133
A
TRP
134
n
111
TRP
134
A
SER
135
n
112
SER
135
A
VAL
136
n
113
VAL
136
A
ALA
137
n
114
ALA
137
A
MSE
138
n
115
MSE
138
A
PRO
139
n
116
PRO
139
A
GLN
140
n
117
GLN
140
A
PRO
141
n
118
PRO
141
A
ILE
142
n
119
ILE
142
A
PRO
143
n
120
PRO
143
A
ILE
144
n
121
ILE
144
A
MSE
145
n
122
MSE
145
A
GLY
146
n
123
GLY
146
A
LYS
147
n
124
LYS
147
A
VAL
148
n
125
VAL
148
A
LEU
149
n
126
LEU
149
A
TYR
150
n
127
TYR
150
A
GLU
151
n
128
GLU
151
A
HIS
152
n
129
HIS
152
A
MSE
153
n
130
MSE
153
A
LYS
154
n
131
LYS
154
A
LYS
155
n
132
LYS
155
A
ASN
156
n
133
ASN
156
A
ASN
157
n
134
ASN
157
A
ILE
158
n
135
ILE
158
A
LYS
159
n
136
LYS
159
A
THR
160
n
137
THR
160
A
VAL
161
n
138
VAL
161
A
GLY
162
n
139
GLY
162
A
TYR
163
n
140
TYR
163
A
ILE
164
n
141
ILE
164
A
GLY
165
n
142
GLY
165
A
TYR
166
n
143
TYR
166
A
SER
167
n
144
SER
167
A
ASP
168
n
145
ASP
168
A
SER
169
n
146
SER
169
A
TYR
170
n
147
TYR
170
A
GLY
171
n
148
GLY
171
A
ASP
172
n
149
ASP
172
A
LEU
173
n
150
LEU
173
A
TRP
174
n
151
TRP
174
A
PHE
175
n
152
PHE
175
A
ASN
176
n
153
ASN
176
A
ASP
177
n
154
ASP
177
A
LEU
178
n
155
LEU
178
A
LYS
179
n
156
LYS
179
A
LYS
180
n
157
LYS
180
A
GLN
181
n
158
GLN
181
A
GLY
182
n
159
GLY
182
A
GLU
183
n
160
GLU
183
A
ALA
184
n
161
ALA
184
A
MSE
185
n
162
MSE
185
A
GLY
186
n
163
GLY
186
A
LEU
187
n
164
LEU
187
A
LYS
188
n
165
LYS
188
A
ILE
189
n
166
ILE
189
A
VAL
190
n
167
VAL
190
A
ALA
191
n
168
ALA
191
A
GLU
192
n
169
GLU
192
A
GLU
193
n
170
GLU
193
A
ARG
194
n
171
ARG
194
A
PHE
195
n
172
PHE
195
A
ALA
196
n
173
ALA
196
A
ARG
197
n
174
ARG
197
A
PRO
198
n
175
PRO
198
A
ASP
199
n
176
ASP
199
A
THR
200
n
177
THR
200
A
SER
201
n
178
SER
201
A
VAL
202
n
179
VAL
202
A
ALA
203
n
180
ALA
203
A
GLY
204
n
181
GLY
204
A
GLN
205
n
182
GLN
205
A
VAL
206
n
183
VAL
206
A
LEU
207
n
184
LEU
207
A
LYS
208
n
185
LYS
208
A
LEU
209
n
186
LEU
209
A
VAL
210
n
187
VAL
210
A
ALA
211
n
188
ALA
211
A
ALA
212
n
189
ALA
212
A
ASN
213
n
190
ASN
213
A
PRO
214
n
191
PRO
214
A
ASP
215
n
192
ASP
215
A
ALA
216
n
193
ALA
216
A
ILE
217
n
194
ILE
217
A
LEU
218
n
195
LEU
218
A
VAL
219
n
196
VAL
219
A
GLY
220
n
197
GLY
220
A
ALA
221
n
198
ALA
221
A
SER
222
n
199
SER
222
A
GLY
223
n
200
GLY
223
A
THR
224
n
201
THR
224
A
ALA
225
n
202
ALA
225
A
ALA
226
n
203
ALA
226
A
ALA
227
n
204
ALA
227
A
LEU
228
n
205
LEU
228
A
PRO
229
n
206
PRO
229
A
GLN
230
n
207
GLN
230
A
THR
231
n
208
THR
231
A
SER
232
n
209
SER
232
A
LEU
233
n
210
LEU
233
A
ARG
234
n
211
ARG
234
A
GLU
235
n
212
GLU
235
A
ARG
236
n
213
ARG
236
A
GLY
237
n
214
GLY
237
A
TYR
238
n
215
TYR
238
A
LYS
239
n
216
LYS
239
A
GLY
240
n
217
GLY
240
A
LEU
241
n
218
LEU
241
A
ILE
242
n
219
ILE
242
A
TYR
243
n
220
TYR
243
A
GLN
244
n
221
GLN
244
A
THR
245
n
222
THR
245
A
HIS
246
n
223
HIS
246
A
GLY
247
n
224
GLY
247
A
ALA
248
n
225
ALA
248
A
ALA
249
n
226
ALA
249
A
SER
250
n
227
SER
250
A
MSE
251
n
228
MSE
251
A
ASP
252
n
229
ASP
252
A
PHE
253
n
230
PHE
253
A
ILE
254
n
231
ILE
254
A
ARG
255
n
232
ARG
255
A
ILE
256
n
233
ILE
256
A
ALA
257
n
234
ALA
257
A
GLY
258
n
235
GLY
258
A
LYS
259
n
236
LYS
259
A
SER
260
n
237
SER
260
A
ALA
261
n
238
ALA
261
A
GLU
262
n
239
GLU
262
A
GLY
263
n
240
GLY
263
A
VAL
264
n
241
VAL
264
A
LEU
265
n
242
LEU
265
A
MSE
266
n
243
MSE
266
A
ALA
267
n
244
ALA
267
A
SER
268
n
245
SER
268
A
GLY
269
n
246
GLY
269
A
PRO
270
n
247
PRO
270
A
VAL
271
n
248
VAL
271
A
MSE
272
n
249
MSE
272
A
ASP
273
n
250
ASP
273
A
PRO
274
n
251
PRO
274
A
GLU
275
n
252
GLU
275
A
GLY
276
n
253
GLY
276
A
GLN
277
n
254
GLN
277
A
ASP
278
n
255
ASP
278
A
ASP
279
n
256
ASP
279
A
SER
280
n
257
SER
280
A
ALA
281
n
258
ALA
281
A
LEU
282
n
259
LEU
282
A
THR
283
n
260
THR
283
A
LYS
284
n
261
LYS
284
A
LYS
285
n
262
LYS
285
A
PRO
286
n
263
PRO
286
A
GLY
287
n
264
GLY
287
A
LEU
288
n
265
LEU
288
A
GLU
289
n
266
GLU
289
A
LEU
290
n
267
LEU
290
A
ASN
291
n
268
ASN
291
A
THR
292
n
269
THR
292
A
ALA
293
n
270
ALA
293
A
TYR
294
n
271
TYR
294
A
GLU
295
n
272
GLU
295
A
ALA
296
n
273
ALA
296
A
LYS
297
n
274
LYS
297
A
TYR
298
n
275
TYR
298
A
GLY
299
n
276
GLY
299
A
PRO
300
n
277
PRO
300
A
ASN
301
n
278
ASN
301
A
SER
302
n
279
SER
302
A
ARG
303
n
280
ARG
303
A
SER
304
n
281
SER
304
A
GLN
305
n
282
GLN
305
A
PHE
306
n
283
PHE
306
A
ALA
307
n
284
ALA
307
A
ALA
308
n
285
ALA
308
A
HIS
309
n
286
HIS
309
A
SER
310
n
287
SER
310
A
PHE
311
n
288
PHE
311
A
ASP
312
n
289
ASP
312
A
ALA
313
n
290
ALA
313
A
PHE
314
n
291
PHE
314
A
LYS
315
n
292
LYS
315
A
VAL
316
n
293
VAL
316
A
LEU
317
n
294
LEU
317
A
GLU
318
n
295
GLU
318
A
ARG
319
n
296
ARG
319
A
VAL
320
n
297
VAL
320
A
VAL
321
n
298
VAL
321
A
PRO
322
n
299
PRO
322
A
VAL
323
n
300
VAL
323
A
ALA
324
n
301
ALA
324
A
LEU
325
n
302
LEU
325
A
LYS
326
n
303
LYS
326
A
THR
327
n
304
THR
327
A
ALA
328
n
305
ALA
328
A
LYS
329
n
306
LYS
329
A
PRO
330
n
307
PRO
330
A
GLY
331
n
308
GLY
331
A
THR
332
n
309
THR
332
A
GLN
333
n
310
GLN
333
A
GLU
334
n
311
GLU
334
A
PHE
335
n
312
PHE
335
A
ARG
336
n
313
ARG
336
A
GLU
337
n
314
GLU
337
A
ALA
338
n
315
ALA
338
A
ILE
339
n
316
ILE
339
A
ARG
340
n
317
ARG
340
A
LYS
341
n
318
LYS
341
A
ALA
342
n
319
ALA
342
A
LEU
343
n
320
LEU
343
A
VAL
344
n
321
VAL
344
A
SER
345
n
322
SER
345
A
GLU
346
n
323
GLU
346
A
LYS
347
n
324
LYS
347
A
ASP
348
n
325
ASP
348
A
ILE
349
n
326
ILE
349
A
ALA
350
n
327
ALA
350
A
ALA
351
n
328
ALA
351
A
SER
352
n
329
SER
352
A
GLN
353
n
330
GLN
353
A
GLY
354
n
331
GLY
354
A
VAL
355
n
332
VAL
355
A
TYR
356
n
333
TYR
356
A
SER
357
n
334
SER
357
A
PHE
358
n
335
PHE
358
A
THR
359
n
336
THR
359
A
GLU
360
n
337
GLU
360
A
THR
361
n
338
THR
361
A
ASP
362
n
339
ASP
362
A
ARG
363
n
340
ARG
363
A
TYR
364
n
341
TYR
364
A
GLY
365
n
342
GLY
365
A
LEU
366
n
343
LEU
366
A
ASP
367
n
344
ASP
367
A
ASP
368
n
345
ASP
368
A
ARG
369
n
346
ARG
369
A
SER
370
n
347
SER
370
A
ARG
371
n
348
ARG
371
A
ILE
372
n
349
ILE
372
A
LEU
373
n
350
LEU
373
A
LEU
374
n
351
LEU
374
A
THR
375
n
352
THR
375
A
VAL
376
n
353
VAL
376
A
LYS
377
n
354
LYS
377
A
ASP
378
n
355
ASP
378
A
GLY
379
n
356
GLY
379
A
LYS
380
n
357
LYS
380
A
TYR
381
n
358
TYR
381
A
VAL
382
n
359
VAL
382
A
MSE
383
n
360
MSE
383
A
VAL
384
n
361
VAL
384
A
LYS
385
n
362
LYS
385
A
0.6596
0.2270
0.1868
1.2836
0.5146
0.9563
0.0185
-0.0627
0.0147
0.0617
0.0519
-0.1527
-0.0151
0.0400
-0.0705
0.0107
0.0031
-0.0044
0.0177
-0.0156
0.0275
refined
11.9476
60.1327
22.4573
X-RAY DIFFRACTION
A
26
A
385
X-RAY DIFFRACTION
1
software_defined_assembly
PISA
1
monomeric
A
MSE
97
SELENOMETHIONINE
A
MSE
74
MET
A
MSE
138
SELENOMETHIONINE
A
MSE
115
MET
A
MSE
145
SELENOMETHIONINE
A
MSE
122
MET
A
MSE
153
SELENOMETHIONINE
A
MSE
130
MET
A
MSE
185
SELENOMETHIONINE
A
MSE
162
MET
A
MSE
251
SELENOMETHIONINE
A
MSE
228
MET
A
MSE
266
SELENOMETHIONINE
A
MSE
243
MET
A
MSE
272
SELENOMETHIONINE
A
MSE
249
MET
A
MSE
383
SELENOMETHIONINE
A
MSE
360
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
61
A
N
ILE
38
A
O
HIS
64
A
O
HIS
41
A
O
ILE
69
A
O
ILE
46
A
N
ILE
35
A
N
ILE
12
A
N
GLY
34
A
N
GLY
11
A
O
MSE
97
A
O
MSE
74
A
N
ILE
96
A
N
ILE
73
A
O
ILE
120
A
O
ILE
97
A
N
ALA
121
A
N
ALA
98
A
O
VAL
136
A
O
VAL
113
A
O
LYS
188
A
O
LYS
165
A
N
VAL
161
A
N
VAL
138
A
N
ILE
164
A
N
ILE
141
A
O
GLY
220
A
O
GLY
197
A
N
ILE
217
A
N
ILE
194
A
O
TYR
243
A
O
TYR
220
A
N
GLN
244
A
N
GLN
221
A
O
LEU
265
A
O
LEU
242
A
N
MSE
266
A
N
MSE
243
A
O
LEU
374
A
O
LEU
351
A
N
THR
375
A
N
THR
352
A
O
VAL
382
A
O
VAL
359
A
N
ILE
349
A
N
ILE
326
A
O
TYR
356
A
O
TYR
333
1
A
CG
GLU
27
A
CG
GLU
4
1
Y
1
A
CD
GLU
27
A
CD
GLU
4
1
Y
1
A
OE1
GLU
27
A
OE1
GLU
4
1
Y
1
A
OE2
GLU
27
A
OE2
GLU
4
1
Y
1
A
CG
LYS
385
A
CG
LYS
362
1
Y
1
A
CD
LYS
385
A
CD
LYS
362
1
Y
1
A
CE
LYS
385
A
CE
LYS
362
1
Y
1
A
NZ
LYS
385
A
NZ
LYS
362
1
Y
1
A
SER
24
A
SER
1
1
Y
1
A
ASN
25
A
ASN
2
1
Y
1
-4.70
0.50
120.30
115.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
336
336
336
N
1
4.02
0.50
120.30
124.32
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
336
336
336
N
1
A
A
CG
CD2
HIS
HIS
246
246
0.056
0.009
1.354
1.410
N
1
A
SER
99
-108.37
-158.41
1
A
ASP
273
-150.12
63.37
2.36
50.00
0.278
0.324
0.000
13542
11622
1920
77.850
24.1958
9.720
-0.1600
0.0000
0.0000
0.6600
0.0000
-0.5000
0.9620
0.9410
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED
0.2133
0.1661
0.1685
0.1685
1.8500
35.5300
1290
25528
25528
5.1000
91.7200
0.2184
0.1689
1.000
0.500
0.8801
5.9000
0.0880
0.1516
0.1417
RANDOM
1
THROUGHOUT
0.000
SAD
0.1520
0.1420
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD WITH PHASES
MASK
1.8500
35.5300
127
2845
19
0
2699
0.015
0.020
2774
0.002
0.020
1872
1.594
1.982
3766
1.036
3.000
4596
5.537
5.000
361
32.801
24.286
105
13.594
15.000
463
16.610
15.000
16
0.095
0.200
435
0.009
0.021
3091
0.009
0.020
525
0.2420
0.1820
1.8980
44
1181
1225
20
63.3100
17.4
1.850
50.000
4FB4
27597
27597
-3
0.085
0.917
1
9.200
7.800
98.900
0.684
1.850
1.880
1343
0.803
1
7.500
96.600
0.651
1.880
1.920
1352
0.857
1
7.600
99.300
0.580
1.920
1.950
1330
0.849
1
7.700
97.600
0.437
1.950
1.990
1359
0.846
1
7.900
98.900
0.418
1.990
2.040
1341
0.921
1
7.900
98.100
0.346
2.040
2.080
1352
0.917
1
8.000
99.200
0.290
2.080
2.140
1357
0.921
1
8.000
97.900
0.240
2.140
2.190
1375
0.933
1
8.100
100.000
0.215
2.190
2.260
1347
0.952
1
8.000
98.200
0.184
2.260
2.330
1375
0.972
1
8.000
98.900
0.156
2.330
2.410
1370
0.934
1
8.000
99.700
0.133
2.410
2.510
1377
0.931
1
8.000
98.800
0.118
2.510
2.630
1367
0.962
1
8.000
99.100
0.103
2.630
2.760
1383
0.983
1
8.000
99.300
0.088
2.760
2.940
1388
1.005
1
8.000
99.400
0.080
2.940
3.160
1390
1.023
1
7.900
99.600
0.068
3.160
3.480
1418
1.049
1
7.800
99.600
0.058
3.480
3.990
1422
0.978
1
7.600
99.500
0.052
3.990
5.020
1442
0.799
1
7.300
99.700
0.048
5.020
50.000
1509
0.659
1
7.000
98.100
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Eleanor J. Dodson
ccp4@ccp4.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/mlphare.html
MLPHARE
other
phasing
Kevin Cowtan
kowtan@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/dm.html
DM
program
6.1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
SBC-Collect
data reduction
HKL-3000
data scaling
HKL-3000
phasing
HKL-3000
phasing
SHELXD
model building
SHELXE
phasing
SOLVE
phasing
RESOLVE
model building
ARP/wARP
phasing
CCP4
model building
O
model building
Coot
Putative branched-chain amino acid transport system substrate-binding protein
The Structure of an ABC-Transporter Family Protein from Rhodopseudomonas palustris in Complex with Caffeic Acid
1
N
N
2
N
N
3
N
N
4
N
N
THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN.
A
ALA
43
A
ALA
20
HELX_P
A
LEU
54
A
LEU
31
1
1
12
A
GLU
55
A
GLU
32
HELX_P
A
VAL
57
A
VAL
34
5
2
3
A
ASP
76
A
ASP
53
HELX_P
A
GLU
90
A
GLU
67
1
3
15
A
VAL
101
A
VAL
78
HELX_P
A
GLN
116
A
GLN
93
1
4
16
A
THR
128
A
THR
105
HELX_P
A
LYS
133
A
LYS
110
1
5
6
A
PRO
141
A
PRO
118
HELX_P
A
ASN
156
A
ASN
133
1
6
16
A
ASP
168
A
ASP
145
HELX_P
A
MSE
185
A
MSE
162
1
7
18
A
VAL
202
A
VAL
179
HELX_P
A
ASN
213
A
ASN
190
1
8
12
A
SER
222
A
SER
199
HELX_P
A
ARG
236
A
ARG
213
1
9
15
A
HIS
246
A
HIS
223
HELX_P
A
ALA
249
A
ALA
226
5
10
4
A
SER
250
A
SER
227
HELX_P
A
GLY
258
A
GLY
235
1
11
9
A
LYS
259
A
LYS
236
HELX_P
A
GLU
262
A
GLU
239
5
12
4
A
GLY
269
A
GLY
246
HELX_P
A
GLN
277
A
GLN
254
5
13
9
A
THR
283
A
THR
260
HELX_P
A
GLY
299
A
GLY
276
1
14
17
A
SER
304
A
SER
281
HELX_P
A
LYS
326
A
LYS
303
1
15
23
A
THR
332
A
THR
309
HELX_P
A
GLU
346
A
GLU
323
1
16
15
A
ASP
367
A
ASP
344
HELX_P
A
ARG
371
A
ARG
348
5
17
5
covale
1.310
A
ILE
96
A
C
ILE
73
1_555
A
MSE
97
A
N
MSE
74
1_555
covale
1.321
A
MSE
97
A
C
MSE
74
1_555
A
GLY
98
A
N
GLY
75
1_555
covale
1.325
A
ALA
137
A
C
ALA
114
1_555
A
MSE
138
A
N
MSE
115
1_555
covale
1.367
A
MSE
138
A
C
MSE
115
1_555
A
PRO
139
A
N
PRO
116
1_555
covale
1.322
A
ILE
144
A
C
ILE
121
1_555
A
MSE
145
A
N
MSE
122
1_555
covale
1.327
A
MSE
145
A
C
MSE
122
1_555
A
GLY
146
A
N
GLY
123
1_555
covale
1.321
A
HIS
152
A
C
HIS
129
1_555
A
MSE
153
A
N
MSE
130
1_555
covale
1.334
A
MSE
153
A
C
MSE
130
1_555
A
LYS
154
A
N
LYS
131
1_555
covale
1.341
A
ALA
184
A
C
ALA
161
1_555
A
MSE
185
A
N
MSE
162
1_555
covale
1.333
A
MSE
185
A
C
MSE
162
1_555
A
GLY
186
A
N
GLY
163
1_555
covale
1.330
A
SER
250
A
C
SER
227
1_555
A
MSE
251
A
N
MSE
228
1_555
covale
1.334
A
MSE
251
A
C
MSE
228
1_555
A
ASP
252
A
N
ASP
229
1_555
covale
1.334
A
LEU
265
A
C
LEU
242
1_555
A
MSE
266
A
N
MSE
243
1_555
covale
1.323
A
MSE
266
A
C
MSE
243
1_555
A
ALA
267
A
N
ALA
244
1_555
covale
1.324
A
VAL
271
A
C
VAL
248
1_555
A
MSE
272
A
N
MSE
249
1_555
covale
1.338
A
MSE
272
A
C
MSE
249
1_555
A
ASP
273
A
N
ASP
250
1_555
covale
1.327
A
VAL
382
A
C
VAL
359
1_555
A
MSE
383
A
N
MSE
360
1_555
covale
1.332
A
MSE
383
A
C
MSE
360
1_555
A
VAL
384
A
N
VAL
361
1_555
SIGNALING PROTEIN
Structural Genomics, PSI-Biology, alpha/beta, aromatic compound transport, aromatic compounds, SIGNALING PROTEIN, Midwest Center for Structural Genomics, MCSG
A
GLY
98
A
GLY
75
1
A
SER
99
A
SER
76
-0.40
Q6N8W4_RHOPA
UNP
1
26
Q6N8W4
AETNEITIGITVTTTGPAAALGIPERNALEFVAKEIGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTPPT
VAVSNVANEAQVPHIALAPLPITPERAKWSVAMPQPIPIMGKVLYEHMKKNNIKTVGYIGYSDSYGDLWFNDLKKQGEAM
GLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALPQTSLRERGYKGLIYQTHGAASMDFIRIAGKSAEGVL
MASGPVMDPEGQDDSALTKKPGLELNTAYEAKYGPNSRSQFAAHSFDAFKVLERVVPVALKTAKPGTQEFREAIRKALVS
EKDIAASQGVYSFTETDRYGLDDRSRILLTVKDGKYVMVK
26
385
4FB4
26
385
Q6N8W4
A
1
3
362
1
EXPRESSION TAG
SER
24
4FB4
A
Q6N8W4
UNP
1
1
EXPRESSION TAG
ASN
25
4FB4
A
Q6N8W4
UNP
2
6
7
2
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
60
A
GLU
37
A
ILE
61
A
ILE
38
A
HIS
64
A
HIS
41
A
ASP
72
A
ASP
49
A
ILE
31
A
ILE
8
A
VAL
37
A
VAL
14
A
VAL
95
A
VAL
72
A
GLY
98
A
GLY
75
A
HIS
119
A
HIS
96
A
ALA
121
A
ALA
98
A
SER
135
A
SER
112
A
ALA
137
A
ALA
114
A
LYS
188
A
LYS
165
A
PHE
195
A
PHE
172
A
THR
160
A
THR
137
A
TYR
166
A
TYR
143
A
ALA
216
A
ALA
193
A
GLY
220
A
GLY
197
A
LEU
241
A
LEU
218
A
GLN
244
A
GLN
221
A
LEU
265
A
LEU
242
A
SER
268
A
SER
245
A
ILE
372
A
ILE
349
A
LYS
377
A
LYS
354
A
LYS
380
A
LYS
357
A
MSE
383
A
MSE
360
A
ILE
349
A
ILE
326
A
ALA
350
A
ALA
327
A
VAL
355
A
VAL
332
A
TYR
356
A
TYR
333
BINDING SITE FOR RESIDUE DHC A 401
Software
15
BINDING SITE FOR RESIDUE GOL A 402
Software
8
A
LEU
46
A
LEU
23
15
1_555
A
VAL
101
A
VAL
78
15
1_555
A
THR
102
A
THR
79
15
1_555
A
LEU
122
A
LEU
99
15
1_555
A
PRO
124
A
PRO
101
15
1_555
A
PRO
139
A
PRO
116
15
1_555
A
TYR
170
A
TYR
147
15
1_555
A
ARG
197
A
ARG
174
15
1_555
A
SER
222
A
SER
199
15
1_555
A
HIS
246
A
HIS
223
15
1_555
A
GLY
247
A
GLY
224
15
1_555
A
GLN
305
A
GLN
282
15
1_555
A
PHE
306
A
PHE
283
15
1_555
A
HIS
309
A
HIS
286
15
1_555
A
HOH
501
D
HOH
15
1_555
A
PRO
42
A
PRO
19
8
1_555
A
TYR
166
A
TYR
143
8
1_555
A
ARG
197
A
ARG
174
8
1_555
A
SER
222
A
SER
199
8
1_555
A
GLY
223
A
GLY
200
8
1_555
A
THR
224
A
THR
201
8
1_555
A
ALA
225
A
ALA
202
8
1_555
A
HOH
507
D
HOH
8
1_555
19
P 21 21 21