0.012671
0.007316
0.000000
0.000000
0.014631
0.000000
0.000000
0.000000
0.009418
0.00000
0.00000
0.00000
Bourne, C.R.
Barrow, W.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
78.921
78.921
106.178
C30 H34 N6 O3
526.629
(2E)-3-{5-[(2,4-diamino-6-ethylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H28 N7 O17 P3
743.405
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
Y
2
N
C
Y
3
N
C
N
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
N
8
N
O
N
9
N
C
Y
10
N
C
N
11
N
O
N
12
N
C
Y
13
N
C
N
14
N
C
N
15
N
C
N
16
N
C
N
17
N
N
N
18
N
N
N
19
N
C
N
20
S
C
N
21
N
C
N
22
N
C
N
23
N
C
Y
24
N
C
Y
25
N
C
Y
26
N
C
Y
27
N
C
Y
28
N
C
Y
29
N
C
N
30
N
O
Y
31
N
C
Y
32
N
C
Y
33
N
N
Y
34
N
C
N
35
N
N
Y
36
N
N
N
37
N
C
N
38
N
C
N
39
N
C
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
O
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
N
N
88
S
C
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
C
N
93
N
C
N
94
N
N
N
95
N
C
N
96
N
N
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
S
C
N
116
N
C
N
117
N
O
N
118
N
C
N
119
N
C
N
120
N
O
N
121
N
N
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
O
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
O
N
155
N
N
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
O
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
N
C
N
188
N
C
N
189
N
O
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
O
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
Y
215
N
C
Y
216
N
N
Y
217
N
C
Y
218
N
C
Y
219
N
N
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
N
N
235
S
C
N
236
N
C
N
237
N
O
N
238
S
C
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
C
N
286
N
N
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
S
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
R
P
N
324
N
O
N
325
N
O
N
326
N
O
N
327
N
C
N
328
R
C
N
329
N
O
N
330
R
C
N
331
N
O
N
332
R
C
N
333
N
O
N
334
R
C
Y
335
N
N
Y
336
N
C
Y
337
N
N
Y
338
N
C
Y
339
N
C
N
340
N
N
Y
341
N
N
Y
342
N
C
Y
343
N
N
Y
344
N
C
N
345
N
O
N
346
N
P
N
347
N
O
N
348
N
O
N
349
N
O
N
350
N
C
N
351
R
C
N
352
N
O
N
353
S
C
N
354
N
O
N
355
R
C
N
356
N
O
N
357
R
C
Y
358
N
N
Y
359
N
C
Y
360
N
C
N
361
N
C
N
362
N
O
N
363
N
N
Y
364
N
C
Y
365
N
C
Y
366
N
C
N
367
N
P
N
368
N
O
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
N
444
N
O
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
N
N
454
S
C
N
455
N
C
N
456
N
O
N
457
R
C
N
458
N
O
N
459
N
C
N
460
N
O
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
N
N
471
S
C
N
472
N
C
N
473
N
O
N
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
N
Y
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
N
484
N
O
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
N
N
498
S
C
N
499
N
C
N
500
N
O
N
501
N
C
Y
502
N
C
Y
503
N
C
Y
504
N
C
Y
505
N
C
Y
506
N
C
Y
507
N
C
N
508
N
O
N
509
N
O
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
N
N
522
S
C
N
523
N
C
N
524
N
O
N
525
N
C
N
526
N
C
N
527
N
C
N
528
N
O
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
Y
4
N
sing
Y
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
Y
10
N
sing
Y
11
N
doub
N
12
N
sing
Y
13
N
sing
Y
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
Y
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
Y
27
N
doub
N
28
E
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
Y
43
N
doub
Y
44
N
sing
Y
45
N
doub
Y
46
N
sing
N
47
N
sing
N
48
N
sing
Y
49
N
doub
N
50
N
sing
Y
51
N
sing
N
52
N
sing
N
53
N
doub
N
54
N
sing
Y
55
N
sing
Y
56
N
doub
Y
57
N
sing
N
58
N
sing
Y
59
N
doub
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
Y
216
N
sing
Y
217
N
doub
Y
218
N
doub
N
219
N
sing
Y
220
N
sing
N
221
N
sing
Y
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
Y
336
N
sing
Y
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
Y
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
doub
N
345
N
sing
N
346
N
sing
Y
347
N
sing
Y
348
N
doub
N
349
N
sing
Y
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
sing
Y
374
N
doub
Y
375
N
doub
N
376
N
sing
N
377
N
sing
Y
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
doub
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
Y
404
N
doub
Y
405
N
sing
Y
406
N
sing
N
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
doub
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
Y
473
N
doub
Y
474
N
sing
Y
475
N
sing
N
476
N
sing
Y
477
N
doub
Y
478
N
sing
Y
479
N
sing
N
480
N
sing
Y
481
N
sing
Y
482
N
doub
N
483
N
sing
Y
484
N
doub
N
485
N
sing
Y
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
doub
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
Y
501
N
doub
Y
502
N
sing
Y
503
N
sing
N
504
N
sing
Y
505
N
doub
N
506
N
sing
Y
507
N
doub
N
508
N
sing
Y
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
doub
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
DE
Chemmedchem
1860-7179
7
1974
1982
10.1002/cmdc.201200291
22930550
Inhibition of Bacterial Dihydrofolate Reductase by 6-Alkyl-2,4-diaminopyrimidines.
2012
10.2210/pdb4fgh/pdb
pdb_00004fgh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
CCD
2012-02-01
BRUKER SMART 6000
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
BRUKER AXS MICROSTAR
18742.533
Dihydrofolate reductase
1.5.1.3
1
man
polymer
743.405
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
1
syn
non-polymer
526.629
(2E)-3-{5-[(2,4-diamino-6-ethylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
69
nat
water
DHFR
no
no
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSI
EDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKKL
VPR
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSI
EDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKKL
VPR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
DHFR, folA
1280
Staphylococcus aureus
469008
Escherichia coli
BL21(DE3)pLysS
pET-101D
1
2.55
51.70
VAPOR DIFFUSION, HANGING DROP
6.5
15-20% PEG 6000, 0.15M NaOAc, 0.1M MES pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Database references
Database references
Data collection
Database references
Derived calculations
1
0
2013-01-09
1
1
2013-01-16
1
2
2013-04-17
1
3
2013-11-20
1
4
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
S. aureus DHFR with propyl-dihydrophthalazine inhibitor RAB1
S. aureus DHFR with propyl-DAP isobutenyl-dihydrophthalazine inhibitor
RCSB
Y
RCSB
2012-06-04
REL
REL
NAP
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
0U6
(2E)-3-{5-[(2,4-diamino-6-ethylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one
GOL
GLYCEROL
HOH
water
NAP
201
2
NAP
NAP
201
A
0U6
200
3
0U6
0U6
202
A
GOL
202
4
GOL
GOL
203
A
HOH
1
5
HOH
HOH
301
A
HOH
2
5
HOH
HOH
302
A
HOH
3
5
HOH
HOH
303
A
HOH
4
5
HOH
HOH
304
A
HOH
5
5
HOH
HOH
305
A
HOH
6
5
HOH
HOH
306
A
HOH
7
5
HOH
HOH
307
A
HOH
8
5
HOH
HOH
308
A
HOH
9
5
HOH
HOH
309
A
HOH
10
5
HOH
HOH
310
A
HOH
11
5
HOH
HOH
311
A
HOH
12
5
HOH
HOH
312
A
HOH
13
5
HOH
HOH
313
A
HOH
14
5
HOH
HOH
314
A
HOH
15
5
HOH
HOH
315
A
HOH
16
5
HOH
HOH
316
A
HOH
17
5
HOH
HOH
317
A
HOH
18
5
HOH
HOH
318
A
HOH
19
5
HOH
HOH
319
A
HOH
20
5
HOH
HOH
320
A
HOH
21
5
HOH
HOH
321
A
HOH
22
5
HOH
HOH
322
A
HOH
23
5
HOH
HOH
323
A
HOH
24
5
HOH
HOH
324
A
HOH
25
5
HOH
HOH
325
A
HOH
26
5
HOH
HOH
326
A
HOH
27
5
HOH
HOH
327
A
HOH
28
5
HOH
HOH
328
A
HOH
29
5
HOH
HOH
329
A
HOH
30
5
HOH
HOH
330
A
HOH
31
5
HOH
HOH
331
A
HOH
32
5
HOH
HOH
332
A
HOH
33
5
HOH
HOH
333
A
HOH
34
5
HOH
HOH
334
A
HOH
35
5
HOH
HOH
335
A
HOH
36
5
HOH
HOH
336
A
HOH
37
5
HOH
HOH
337
A
HOH
38
5
HOH
HOH
338
A
HOH
39
5
HOH
HOH
339
A
HOH
40
5
HOH
HOH
340
A
HOH
41
5
HOH
HOH
341
A
HOH
42
5
HOH
HOH
342
A
HOH
43
5
HOH
HOH
343
A
HOH
44
5
HOH
HOH
344
A
HOH
45
5
HOH
HOH
345
A
HOH
46
5
HOH
HOH
346
A
HOH
47
5
HOH
HOH
347
A
HOH
48
5
HOH
HOH
348
A
HOH
49
5
HOH
HOH
349
A
HOH
50
5
HOH
HOH
350
A
HOH
51
5
HOH
HOH
351
A
HOH
52
5
HOH
HOH
352
A
HOH
53
5
HOH
HOH
353
A
HOH
54
5
HOH
HOH
354
A
HOH
55
5
HOH
HOH
355
A
HOH
56
5
HOH
HOH
356
A
HOH
57
5
HOH
HOH
357
A
HOH
58
5
HOH
HOH
358
A
HOH
59
5
HOH
HOH
359
A
HOH
60
5
HOH
HOH
360
A
HOH
61
5
HOH
HOH
361
A
HOH
62
5
HOH
HOH
362
A
HOH
63
5
HOH
HOH
363
A
HOH
64
5
HOH
HOH
364
A
HOH
65
5
HOH
HOH
365
A
HOH
66
5
HOH
HOH
366
A
HOH
67
5
HOH
HOH
367
A
HOH
68
5
HOH
HOH
368
A
HOH
69
5
HOH
HOH
369
A
MET
0
n
1
MET
0
A
THR
1
n
2
THR
1
A
LEU
2
n
3
LEU
2
A
SER
3
n
4
SER
3
A
ILE
4
n
5
ILE
4
A
LEU
5
n
6
LEU
5
A
VAL
6
n
7
VAL
6
A
ALA
7
n
8
ALA
7
A
HIS
8
n
9
HIS
8
A
ASP
9
n
10
ASP
9
A
LEU
10
n
11
LEU
10
A
GLN
11
n
12
GLN
11
A
ARG
12
n
13
ARG
12
A
VAL
13
n
14
VAL
13
A
ILE
14
n
15
ILE
14
A
GLY
15
n
16
GLY
15
A
PHE
16
n
17
PHE
16
A
GLU
17
n
18
GLU
17
A
ASN
18
n
19
ASN
18
A
GLN
19
n
20
GLN
19
A
LEU
20
n
21
LEU
20
A
PRO
21
n
22
PRO
21
A
TRP
22
n
23
TRP
22
A
HIS
23
n
24
HIS
23
A
LEU
24
n
25
LEU
24
A
PRO
25
n
26
PRO
25
A
ASN
26
n
27
ASN
26
A
ASP
27
n
28
ASP
27
A
LEU
28
n
29
LEU
28
A
LYS
29
n
30
LYS
29
A
HIS
30
n
31
HIS
30
A
VAL
31
n
32
VAL
31
A
LYS
32
n
33
LYS
32
A
LYS
33
n
34
LYS
33
A
LEU
34
n
35
LEU
34
A
SER
35
n
36
SER
35
A
THR
36
n
37
THR
36
A
GLY
37
n
38
GLY
37
A
HIS
38
n
39
HIS
38
A
THR
39
n
40
THR
39
A
LEU
40
n
41
LEU
40
A
VAL
41
n
42
VAL
41
A
MET
42
n
43
MET
42
A
GLY
43
n
44
GLY
43
A
ARG
44
n
45
ARG
44
A
LYS
45
n
46
LYS
45
A
THR
46
n
47
THR
46
A
PHE
47
n
48
PHE
47
A
GLU
48
n
49
GLU
48
A
SER
49
n
50
SER
49
A
ILE
50
n
51
ILE
50
A
GLY
51
n
52
GLY
51
A
LYS
52
n
53
LYS
52
A
PRO
53
n
54
PRO
53
A
LEU
54
n
55
LEU
54
A
PRO
55
n
56
PRO
55
A
ASN
56
n
57
ASN
56
A
ARG
57
n
58
ARG
57
A
ARG
58
n
59
ARG
58
A
ASN
59
n
60
ASN
59
A
VAL
60
n
61
VAL
60
A
VAL
61
n
62
VAL
61
A
LEU
62
n
63
LEU
62
A
THR
63
n
64
THR
63
A
SER
64
n
65
SER
64
A
ASP
65
n
66
ASP
65
A
THR
66
n
67
THR
66
A
SER
67
n
68
SER
67
A
PHE
68
n
69
PHE
68
A
ASN
69
n
70
ASN
69
A
VAL
70
n
71
VAL
70
A
GLU
71
n
72
GLU
71
A
GLY
72
n
73
GLY
72
A
VAL
73
n
74
VAL
73
A
ASP
74
n
75
ASP
74
A
VAL
75
n
76
VAL
75
A
ILE
76
n
77
ILE
76
A
HIS
77
n
78
HIS
77
A
SER
78
n
79
SER
78
A
ILE
79
n
80
ILE
79
A
GLU
80
n
81
GLU
80
A
ASP
81
n
82
ASP
81
A
ILE
82
n
83
ILE
82
A
TYR
83
n
84
TYR
83
A
GLN
84
n
85
GLN
84
A
LEU
85
n
86
LEU
85
A
PRO
86
n
87
PRO
86
A
GLY
87
n
88
GLY
87
A
HIS
88
n
89
HIS
88
A
VAL
89
n
90
VAL
89
A
PHE
90
n
91
PHE
90
A
ILE
91
n
92
ILE
91
A
PHE
92
n
93
PHE
92
A
GLY
93
n
94
GLY
93
A
GLY
94
n
95
GLY
94
A
GLN
95
n
96
GLN
95
A
THR
96
n
97
THR
96
A
LEU
97
n
98
LEU
97
A
PHE
98
n
99
PHE
98
A
GLU
99
n
100
GLU
99
A
GLU
100
n
101
GLU
100
A
MET
101
n
102
MET
101
A
ILE
102
n
103
ILE
102
A
ASP
103
n
104
ASP
103
A
LYS
104
n
105
LYS
104
A
VAL
105
n
106
VAL
105
A
ASP
106
n
107
ASP
106
A
ASP
107
n
108
ASP
107
A
MET
108
n
109
MET
108
A
TYR
109
n
110
TYR
109
A
ILE
110
n
111
ILE
110
A
THR
111
n
112
THR
111
A
VAL
112
n
113
VAL
112
A
ILE
113
n
114
ILE
113
A
GLU
114
n
115
GLU
114
A
GLY
115
n
116
GLY
115
A
LYS
116
n
117
LYS
116
A
PHE
117
n
118
PHE
117
A
ARG
118
n
119
ARG
118
A
GLY
119
n
120
GLY
119
A
ASP
120
n
121
ASP
120
A
THR
121
n
122
THR
121
A
PHE
122
n
123
PHE
122
A
PHE
123
n
124
PHE
123
A
PRO
124
n
125
PRO
124
A
PRO
125
n
126
PRO
125
A
TYR
126
n
127
TYR
126
A
THR
127
n
128
THR
127
A
PHE
128
n
129
PHE
128
A
GLU
129
n
130
GLU
129
A
ASP
130
n
131
ASP
130
A
TRP
131
n
132
TRP
131
A
GLU
132
n
133
GLU
132
A
VAL
133
n
134
VAL
133
A
ALA
134
n
135
ALA
134
A
SER
135
n
136
SER
135
A
SER
136
n
137
SER
136
A
VAL
137
n
138
VAL
137
A
GLU
138
n
139
GLU
138
A
GLY
139
n
140
GLY
139
A
LYS
140
n
141
LYS
140
A
LEU
141
n
142
LEU
141
A
ASP
142
n
143
ASP
142
A
GLU
143
n
144
GLU
143
A
LYS
144
n
145
LYS
144
A
ASN
145
n
146
ASN
145
A
THR
146
n
147
THR
146
A
ILE
147
n
148
ILE
147
A
PRO
148
n
149
PRO
148
A
HIS
149
n
150
HIS
149
A
THR
150
n
151
THR
150
A
PHE
151
n
152
PHE
151
A
LEU
152
n
153
LEU
152
A
HIS
153
n
154
HIS
153
A
LEU
154
n
155
LEU
154
A
ILE
155
n
156
ILE
155
A
ARG
156
n
157
ARG
156
A
LYS
157
n
158
LYS
157
A
LYS
158
n
159
LYS
158
A
LEU
159
n
160
LEU
159
A
VAL
160
n
161
VAL
160
A
PRO
161
n
162
PRO
161
A
ALA
162
n
163
ARG
162
A
2.3701
0.8309
-0.3747
2.1357
0.1026
2.3924
0.0303
-0.1440
0.2099
0.1396
0.0371
-0.0910
-0.2995
-0.0029
-0.0585
0.1852
0.0277
0.0374
0.0731
-0.0136
0.1604
refined
-2.0358
26.5153
-1.9318
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resseq 0:162)
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASP
74
A
O
ASP
75
A
N
ASN
59
A
N
ASN
60
A
O
ARG
58
A
O
ARG
59
A
N
LEU
40
A
N
LEU
41
A
N
VAL
41
A
N
VAL
42
A
O
PHE
92
A
O
PHE
93
A
O
ILE
91
A
O
ILE
92
A
N
SER
3
A
N
SER
4
A
N
ILE
4
A
N
ILE
5
A
O
TYR
109
A
O
TYR
110
A
N
ILE
110
A
N
ILE
111
A
O
LEU
152
A
O
LEU
153
A
O
PHE
151
A
O
PHE
152
A
N
VAL
137
A
N
VAL
138
A
N
ILE
14
A
N
ILE
15
A
O
THR
121
A
O
THR
122
1
A
CG
ARG
162
A
CG
ARG
163
1
Y
1
A
CD
ARG
162
A
CD
ARG
163
1
Y
1
A
NE
ARG
162
A
NE
ARG
163
1
Y
1
A
CZ
ARG
162
A
CZ
ARG
163
1
Y
1
A
NH1
ARG
162
A
NH1
ARG
163
1
Y
1
A
NH2
ARG
162
A
NH2
ARG
163
1
Y
1
A
HIS
38
-119.20
-163.52
1
A
ASN
56
70.69
35.83
1
A
ASN
69
-154.12
84.24
1
A
ASP
142
-149.95
-157.93
-4.9774
0.0000
0.0000
-4.9774
-0.0000
9.9548
0.2463
0.1916
0.1972
2.500
68.348
723
7218
10.02
99.94
0.33
1
1.34
PDB entry 3M08
22.56
0.86
1.10
ML
FLAT BULK SOLVENT MODEL
29.874
0.369
2.500
68.348
69
1478
93
0
1316
0.008
1449
1.184
1975
23.655
577
0.087
219
0.006
239
0.3037
0.2242
2.6932
140
1257
100.00
0.2629
0.2171
2.9643
136
1265
100.00
0.2764
0.1974
3.3932
147
1275
100.00
0.2318
0.1767
4.2750
146
1299
100.00
0.2123
0.1776
68.3731
154
1399
100.00
2.5
70.0
4FGH
7223
0.160
1
19.6
36.0
100
refinement
PHENIX
(phenix.refine: 1.7.2_869)
S. aureus dihydrofolate reductase co-crystallized with ethyl-DAP isobutenyl-dihydrophthalazine inhibitor
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
LEU
24
A
LEU
25
HELX_P
A
THR
36
A
THR
37
1
1
13
A
ARG
44
A
ARG
45
HELX_P
A
GLY
51
A
GLY
52
1
2
8
A
SER
78
A
SER
79
HELX_P
A
LEU
85
A
LEU
86
5
3
8
A
GLY
94
A
GLY
95
HELX_P
A
ILE
102
A
ILE
103
1
4
9
OXIDOREDUCTASE/INHIBITOR
OXIDOREDUCTASE-INHIBITOR complex
A
GLY
93
A
GLY
94
1
A
GLY
94
A
GLY
95
-1.56
DYR_STAAU
UNP
1
1
P0A017
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSI
EDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
1
159
4FGH
0
158
P0A017
A
1
1
159
1
expression tag
LEU
159
4FGH
A
P0A017
UNP
160
1
expression tag
VAL
160
4FGH
A
P0A017
UNP
161
1
expression tag
PRO
161
4FGH
A
P0A017
UNP
162
1
expression tag
ARG
162
4FGH
A
P0A017
UNP
163
8
2
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
73
A
VAL
74
A
ILE
76
A
ILE
77
A
ARG
58
A
ARG
59
A
LEU
62
A
LEU
63
A
THR
39
A
THR
40
A
GLY
43
A
GLY
44
A
HIS
88
A
HIS
89
A
GLY
93
A
GLY
94
A
THR
1
A
THR
2
A
ASP
9
A
ASP
10
A
ASP
107
A
ASP
108
A
ILE
113
A
ILE
114
A
HIS
149
A
HIS
150
A
ARG
156
A
ARG
157
A
TRP
131
A
TRP
132
A
GLU
138
A
GLU
139
A
VAL
13
A
VAL
14
A
GLY
15
A
GLY
16
A
THR
121
A
THR
122
A
PHE
122
A
PHE
123
BINDING SITE FOR RESIDUE NAP A 201
A
NAP
201
Software
27
BINDING SITE FOR RESIDUE 0U6 A 202
A
0U6
202
Software
16
BINDING SITE FOR RESIDUE GOL A 203
A
GOL
203
Software
4
A
VAL
6
A
VAL
7
27
1_555
A
ALA
7
A
ALA
8
27
1_555
A
ILE
14
A
ILE
15
27
1_555
A
ASN
18
A
ASN
19
27
1_555
A
GLN
19
A
GLN
20
27
1_555
A
LEU
20
A
LEU
21
27
1_555
A
GLY
43
A
GLY
44
27
1_555
A
ARG
44
A
ARG
45
27
1_555
A
LYS
45
A
LYS
46
27
1_555
A
THR
46
A
THR
47
27
1_555
A
LEU
62
A
LEU
63
27
1_555
A
THR
63
A
THR
64
27
1_555
A
SER
64
A
SER
65
27
1_555
A
HIS
77
A
HIS
78
27
1_555
A
ILE
79
A
ILE
80
27
1_555
A
PHE
92
A
PHE
93
27
1_555
A
GLY
93
A
GLY
94
27
1_555
A
GLY
94
A
GLY
95
27
1_555
A
GLN
95
A
GLN
96
27
1_555
A
THR
96
A
THR
97
27
1_555
A
GLU
100
A
GLU
101
27
1_555
A
THR
121
A
THR
122
27
1_555
A
0U6
202
C
0U6
27
1_555
A
HOH
317
E
HOH
27
1_555
A
HOH
326
E
HOH
27
1_555
A
HOH
335
E
HOH
27
1_555
A
HOH
352
E
HOH
27
1_555
A
LEU
5
A
LEU
6
16
1_555
A
VAL
6
A
VAL
7
16
1_555
A
ALA
7
A
ALA
8
16
1_555
A
LEU
20
A
LEU
21
16
1_555
A
ASP
27
A
ASP
28
16
1_555
A
LEU
28
A
LEU
29
16
1_555
A
VAL
31
A
VAL
32
16
1_555
A
LYS
32
A
LYS
33
16
1_555
A
SER
49
A
SER
50
16
1_555
A
LEU
54
A
LEU
55
16
1_555
A
PRO
55
A
PRO
56
16
1_555
A
ARG
57
A
ARG
58
16
1_555
A
PHE
92
A
PHE
93
16
1_555
A
THR
111
A
THR
112
16
1_555
A
NAP
201
B
NAP
16
1_555
A
HOH
340
E
HOH
16
1_555
A
ARG
12
A
ARG
13
4
1_555
A
PRO
125
A
PRO
126
4
1_555
A
TYR
126
A
TYR
127
4
1_555
A
GLU
132
A
GLU
133
4
5_554
178
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