0.012920
0.007459
0.000000
-0.000000
0.014919
0.000000
0.000000
-0.000000
0.027382
0.000000
0.000000
0.000000
Seattle Structural Genomics Center for Infectious Disease (SSGCID)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
77.400
77.400
36.520
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
R
C
N
272
N
O
N
273
N
C
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
Y
281
N
doub
Y
282
N
sing
Y
283
N
sing
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
doub
N
288
N
sing
Y
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
TO BE PUBLISHED
0353
Crystal structure of the N-terminal domain of Hantaan virus strain 76-118 nucleoprotein
10.2210/pdb4fi5/pdb
pdb_00004fi5
100
1
CCD
2012-05-31
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
1.003317
1.0
BL7-1
SSRL
1.003317
SYNCHROTRON
SSRL BEAMLINE BL7-1
12829.333
Nucleoprotein
unp residues 3-93
1
man
polymer
18.015
water
71
nat
water
Nucleocapsid protein, Protein N
no
no
MAHHHHHHMGTLEAQTQGPGSMTMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDE
LKRQLADRIATGKNLGKEQDPTGVEPGDHLKER
MAHHHHHHMGTLEAQTQGPGSMTMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDE
LKRQLADRIATGKNLGKEQDPTGVEPGDHLKER
A
HahaA.17785.a
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
76-118
sample
N
11602
Hantaan virus
562
Escherichia coli
plasmid
pAVA0421
1
2.46
50.03
VAPOR DIFFUSION, SITTING DROP
7.5
HahaA.17785.a.A16.PS01490 at 20 mg/mL against Morpheus screen condition g8, 12.5% PEG1000, 12.5% PEG3350, 12.5% MPD, 20 mM Na-formate, 20 mM Na-citrate, 20 mM Ammonium acetate, 20 mM NaK tartrate, 100 mM MOPS/HEPES-Na pH 7.5, crystal tracking ID 234641g8, puck ID hky1-5, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Seattle Structural Genomics Center for Infectious Disease
SSGCID
NIAID, National Institute of Allergy and Infectious Diseases
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Data collection
Database references
Refinement description
1
0
2012-06-20
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2012-06-07
REL
REL
HOH
water
2IC9
pdb ID 2ic9
PDB
experimental model
HOH
1
2
HOH
HOH
101
A
HOH
2
2
HOH
HOH
102
A
HOH
3
2
HOH
HOH
103
A
HOH
4
2
HOH
HOH
104
A
HOH
5
2
HOH
HOH
105
A
HOH
6
2
HOH
HOH
106
A
HOH
7
2
HOH
HOH
107
A
HOH
8
2
HOH
HOH
108
A
HOH
9
2
HOH
HOH
109
A
HOH
10
2
HOH
HOH
110
A
HOH
11
2
HOH
HOH
111
A
HOH
12
2
HOH
HOH
112
A
HOH
13
2
HOH
HOH
113
A
HOH
14
2
HOH
HOH
114
A
HOH
15
2
HOH
HOH
115
A
HOH
16
2
HOH
HOH
116
A
HOH
17
2
HOH
HOH
117
A
HOH
18
2
HOH
HOH
118
A
HOH
19
2
HOH
HOH
119
A
HOH
20
2
HOH
HOH
120
A
HOH
21
2
HOH
HOH
121
A
HOH
22
2
HOH
HOH
122
A
HOH
23
2
HOH
HOH
123
A
HOH
24
2
HOH
HOH
124
A
HOH
25
2
HOH
HOH
125
A
HOH
26
2
HOH
HOH
126
A
HOH
27
2
HOH
HOH
127
A
HOH
28
2
HOH
HOH
128
A
HOH
29
2
HOH
HOH
129
A
HOH
30
2
HOH
HOH
130
A
HOH
31
2
HOH
HOH
131
A
HOH
32
2
HOH
HOH
132
A
HOH
33
2
HOH
HOH
133
A
HOH
34
2
HOH
HOH
134
A
HOH
35
2
HOH
HOH
135
A
HOH
36
2
HOH
HOH
136
A
HOH
37
2
HOH
HOH
137
A
HOH
38
2
HOH
HOH
138
A
HOH
39
2
HOH
HOH
139
A
HOH
40
2
HOH
HOH
140
A
HOH
41
2
HOH
HOH
141
A
HOH
42
2
HOH
HOH
142
A
HOH
43
2
HOH
HOH
143
A
HOH
44
2
HOH
HOH
144
A
HOH
45
2
HOH
HOH
145
A
HOH
46
2
HOH
HOH
146
A
HOH
47
2
HOH
HOH
147
A
HOH
48
2
HOH
HOH
148
A
HOH
49
2
HOH
HOH
149
A
HOH
50
2
HOH
HOH
150
A
HOH
51
2
HOH
HOH
151
A
HOH
52
2
HOH
HOH
152
A
HOH
53
2
HOH
HOH
153
A
HOH
54
2
HOH
HOH
154
A
HOH
55
2
HOH
HOH
155
A
HOH
56
2
HOH
HOH
156
A
HOH
57
2
HOH
HOH
157
A
HOH
58
2
HOH
HOH
158
A
HOH
59
2
HOH
HOH
159
A
HOH
60
2
HOH
HOH
160
A
HOH
61
2
HOH
HOH
161
A
HOH
62
2
HOH
HOH
162
A
HOH
63
2
HOH
HOH
163
A
HOH
64
2
HOH
HOH
164
A
HOH
65
2
HOH
HOH
165
A
HOH
66
2
HOH
HOH
166
A
HOH
67
2
HOH
HOH
167
A
HOH
68
2
HOH
HOH
168
A
HOH
69
2
HOH
HOH
169
A
HOH
70
2
HOH
HOH
170
A
HOH
71
2
HOH
HOH
171
A
3.000
3.000
19.350
19.350
Phaser MODE: MR_AUTO
n
1
-20
A
n
2
-19
A
n
3
-18
A
n
4
-17
A
n
5
-16
A
n
6
-15
A
n
7
-14
A
n
8
-13
A
n
9
-12
A
n
10
-11
A
n
11
-10
A
n
12
-9
A
n
13
-8
A
n
14
-7
A
n
15
-6
A
n
16
-5
A
n
17
-4
A
n
18
-3
A
n
19
-2
A
n
20
-1
A
SER
0
n
21
SER
0
A
MET
1
n
22
MET
1
A
THR
2
n
23
THR
2
A
MET
3
n
24
MET
3
A
GLU
4
n
25
GLU
4
A
GLU
5
n
26
GLU
5
A
LEU
6
n
27
LEU
6
A
GLN
7
n
28
GLN
7
A
ARG
8
n
29
ARG
8
A
GLU
9
n
30
GLU
9
A
ILE
10
n
31
ILE
10
A
ASN
11
n
32
ASN
11
A
ALA
12
n
33
ALA
12
A
HIS
13
n
34
HIS
13
A
GLU
14
n
35
GLU
14
A
GLY
15
n
36
GLY
15
A
GLN
16
n
37
GLN
16
A
LEU
17
n
38
LEU
17
A
VAL
18
n
39
VAL
18
A
ILE
19
n
40
ILE
19
A
ALA
20
n
41
ALA
20
A
ARG
21
n
42
ARG
21
A
GLN
22
n
43
GLN
22
A
LYS
23
n
44
LYS
23
A
VAL
24
n
45
VAL
24
A
ARG
25
n
46
ARG
25
A
ASP
26
n
47
ASP
26
A
ALA
27
n
48
ALA
27
A
GLU
28
n
49
GLU
28
A
LYS
29
n
50
LYS
29
A
GLN
30
n
51
GLN
30
A
TYR
31
n
52
TYR
31
A
GLU
32
n
53
GLU
32
A
LYS
33
n
54
LYS
33
A
ASP
34
n
55
ASP
34
A
PRO
35
n
56
PRO
35
A
ASP
36
n
57
ASP
36
A
GLU
37
n
58
GLU
37
A
LEU
38
n
59
LEU
38
A
ASN
39
n
60
ASN
39
A
LYS
40
n
61
LYS
40
A
ARG
41
n
62
ARG
41
A
THR
42
n
63
THR
42
A
LEU
43
n
64
LEU
43
A
THR
44
n
65
THR
44
A
ASP
45
n
66
ASP
45
A
ARG
46
n
67
ARG
46
A
GLU
47
n
68
GLU
47
A
GLY
48
n
69
GLY
48
A
VAL
49
n
70
VAL
49
A
ALA
50
n
71
ALA
50
A
VAL
51
n
72
VAL
51
A
SER
52
n
73
SER
52
A
ILE
53
n
74
ILE
53
A
GLN
54
n
75
GLN
54
A
ALA
55
n
76
ALA
55
A
LYS
56
n
77
LYS
56
A
ILE
57
n
78
ILE
57
A
ASP
58
n
79
ASP
58
A
GLU
59
n
80
GLU
59
A
LEU
60
n
81
LEU
60
A
LYS
61
n
82
LYS
61
A
ARG
62
n
83
ARG
62
A
GLN
63
n
84
GLN
63
A
LEU
64
n
85
LEU
64
A
ALA
65
n
86
ALA
65
A
ASP
66
n
87
ASP
66
A
ARG
67
n
88
ARG
67
A
ILE
68
n
89
ILE
68
A
ALA
69
n
90
ALA
69
A
THR
70
n
91
THR
70
A
n
92
71
A
n
93
72
A
n
94
73
A
n
95
74
A
n
96
75
A
n
97
76
A
n
98
77
A
n
99
78
A
n
100
79
A
n
101
80
A
n
102
81
A
n
103
82
A
n
104
83
A
n
105
84
A
n
106
85
A
n
107
86
A
n
108
87
A
n
109
88
A
n
110
89
A
n
111
90
A
n
112
91
A
n
113
92
A
0.1588
-0.2940
-0.4638
0.6551
1.3391
3.4483
0.0191
-0.0417
-0.0144
0.0174
0.0390
0.0034
0.1464
-0.0511
-0.0581
0.0797
-0.0244
-0.0009
0.0265
0.0085
0.0171
refined
30.1016
12.5975
-0.2086
X-RAY DIFFRACTION
A
0
A
70
X-RAY DIFFRACTION
1
A
101
A
171
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
LYS
33
A
CG
LYS
54
1
Y
1
A
CD
LYS
33
A
CD
LYS
54
1
Y
1
A
CE
LYS
33
A
CE
LYS
54
1
Y
1
A
NZ
LYS
33
A
NZ
LYS
54
1
Y
1
A
CG
LYS
56
A
CG
LYS
77
1
Y
1
A
CD
LYS
56
A
CD
LYS
77
1
Y
1
A
CE
LYS
56
A
CE
LYS
77
1
Y
1
A
NZ
LYS
56
A
NZ
LYS
77
1
Y
1
A
MET
-20
A
MET
1
1
Y
1
A
ALA
-19
A
ALA
2
1
Y
1
A
HIS
-18
A
HIS
3
1
Y
1
A
HIS
-17
A
HIS
4
1
Y
1
A
HIS
-16
A
HIS
5
1
Y
1
A
HIS
-15
A
HIS
6
1
Y
1
A
HIS
-14
A
HIS
7
1
Y
1
A
HIS
-13
A
HIS
8
1
Y
1
A
MET
-12
A
MET
9
1
Y
1
A
GLY
-11
A
GLY
10
1
Y
1
A
THR
-10
A
THR
11
1
Y
1
A
LEU
-9
A
LEU
12
1
Y
1
A
GLU
-8
A
GLU
13
1
Y
1
A
ALA
-7
A
ALA
14
1
Y
1
A
GLN
-6
A
GLN
15
1
Y
1
A
THR
-5
A
THR
16
1
Y
1
A
GLN
-4
A
GLN
17
1
Y
1
A
GLY
-3
A
GLY
18
1
Y
1
A
PRO
-2
A
PRO
19
1
Y
1
A
GLY
-1
A
GLY
20
1
Y
1
A
GLY
71
A
GLY
92
1
Y
1
A
LYS
72
A
LYS
93
1
Y
1
A
ASN
73
A
ASN
94
1
Y
1
A
LEU
74
A
LEU
95
1
Y
1
A
GLY
75
A
GLY
96
1
Y
1
A
LYS
76
A
LYS
97
1
Y
1
A
GLU
77
A
GLU
98
1
Y
1
A
GLN
78
A
GLN
99
1
Y
1
A
ASP
79
A
ASP
100
1
Y
1
A
PRO
80
A
PRO
101
1
Y
1
A
THR
81
A
THR
102
1
Y
1
A
GLY
82
A
GLY
103
1
Y
1
A
VAL
83
A
VAL
104
1
Y
1
A
GLU
84
A
GLU
105
1
Y
1
A
PRO
85
A
PRO
106
1
Y
1
A
GLY
86
A
GLY
107
1
Y
1
A
ASP
87
A
ASP
108
1
Y
1
A
HIS
88
A
HIS
109
1
Y
1
A
LEU
89
A
LEU
110
1
Y
1
A
LYS
90
A
LYS
111
1
Y
1
A
GLU
91
A
GLU
112
1
Y
1
A
ARG
92
A
ARG
113
1
Y
73.230
35.4455
18.610
2.1500
1.0800
-0.0000
2.1500
-0.0000
-3.2300
0.9520
0.9320
U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2354
0.1915
0.1957
2.2000
50.0000
645
6594
9.8000
99.7600
0.2087
0.1708
1.000
0.500
0.8625
7.9620
0.1100
0.1910
0.1766
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1910
0.1770
0.8000
0.8000
1.2000
pdb ID 2ic9
MAXIMUM LIKELIHOOD
MASK
2.2000
50.0000
71
637
0
0
566
0.014
0.019
577
0.002
0.020
408
1.513
1.973
775
0.951
3.000
992
5.121
5.000
72
29.060
24.545
33
16.035
15.000
118
20.423
15.000
8
0.078
0.200
89
0.006
0.020
644
0.001
0.020
108
0.2940
0.2440
2.2570
52
388
440
20
99.5500
37.089
2.200
50
4FI5
6619
6604
-3.000
0.078
1
21.380
7.3
99.800
0.579
2.200
2.260
3.900
3560
483
1
100.000
0.469
2.260
2.320
4.940
3387
461
1
100.000
0.418
2.320
2.390
5.370
3334
452
1
100.000
0.338
2.390
2.460
6.750
3241
438
1
100.000
0.305
2.460
2.540
7.330
3297
449
1
100.000
0.223
2.540
2.630
9.350
3053
417
1
100.000
0.219
2.630
2.730
9.940
2905
396
1
100.000
0.147
2.730
2.840
13.980
2879
390
1
100.000
0.121
2.840
2.970
16.460
2756
374
1
100.000
0.087
2.970
3.110
21.940
2622
359
1
100.000
0.076
3.110
3.280
25.360
2452
333
1
100.000
0.060
3.280
3.480
30.970
2356
327
1
99.700
0.044
3.480
3.720
40.190
2269
310
1
100.000
0.035
3.720
4.020
48.030
2014
280
1
100.000
0.032
4.020
4.400
51.680
1868
261
1
100.000
0.035
4.400
4.920
47.700
1683
243
1
100.000
0.036
4.920
5.680
41.950
1505
219
1
100.000
0.039
5.680
6.960
40.440
1276
187
1
99.500
0.022
6.960
9.840
62.970
991
145
1
100.000
0.017
9.840
69.870
494
80
1
86.000
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Tue May 1 08:17:33 2012 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.3.0
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
August 3, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data reduction
XDS
Crystal structure of the N-terminal domain of Hantaan virus strain 76-118 nucleoprotein
1
N
N
2
N
N
A
THR
2
A
THR
23
HELX_P
A
ASP
34
A
ASP
55
1
1
33
A
ASP
36
A
ASP
57
HELX_P
A
THR
70
A
THR
91
1
2
35
VIRAL PROTEIN
Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Seattle Structural Genomics Center for Infectious Disease, SSGCID, Korean hemorrhagic fever virus, Hantaan virus, Hantavirus, NP, nucleoprotein, antibody epitope, N-terminal domain, ssRNA negative strand virus, Bunyaviridae, human host, Eurasian field mouse host, virion, VIRAL PROTEIN
NCAP_HANTV
UNP
1
3
P05133
TMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAVSIQAKIDELKRQLADRIATGKNLGKEQDPT
GVEPGDHLKER
3
93
4FI5
2
92
P05133
A
1
23
113
1
initiating methionine
MET
-20
4FI5
A
P05133
UNP
1
1
expression tag
ALA
-19
4FI5
A
P05133
UNP
2
1
expression tag
HIS
-18
4FI5
A
P05133
UNP
3
1
expression tag
HIS
-17
4FI5
A
P05133
UNP
4
1
expression tag
HIS
-16
4FI5
A
P05133
UNP
5
1
expression tag
HIS
-15
4FI5
A
P05133
UNP
6
1
expression tag
HIS
-14
4FI5
A
P05133
UNP
7
1
expression tag
HIS
-13
4FI5
A
P05133
UNP
8
1
expression tag
MET
-12
4FI5
A
P05133
UNP
9
1
expression tag
GLY
-11
4FI5
A
P05133
UNP
10
1
expression tag
THR
-10
4FI5
A
P05133
UNP
11
1
expression tag
LEU
-9
4FI5
A
P05133
UNP
12
1
expression tag
GLU
-8
4FI5
A
P05133
UNP
13
1
expression tag
ALA
-7
4FI5
A
P05133
UNP
14
1
expression tag
GLN
-6
4FI5
A
P05133
UNP
15
1
expression tag
THR
-5
4FI5
A
P05133
UNP
16
1
expression tag
GLN
-4
4FI5
A
P05133
UNP
17
1
expression tag
GLY
-3
4FI5
A
P05133
UNP
18
1
expression tag
PRO
-2
4FI5
A
P05133
UNP
19
1
expression tag
GLY
-1
4FI5
A
P05133
UNP
20
1
expression tag
SER
0
4FI5
A
P05133
UNP
21
1
expression tag
MET
1
4FI5
A
P05133
UNP
22
154
P 32 2 1