0.053784 0.031052 0.000000 0.000000 0.062104 0.000000 0.000000 0.000000 0.013755 0.00000 0.00000 0.00000 Chatake, T. Sunami, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 18.593 18.593 72.700 Cl -1 35.453 CHLORIDE ION non-polymer C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer N 1 N CL N 2 N O N 3 N P N 4 N O N 5 N O N 6 N O N 7 N C N 8 R C N 9 N O N 10 S C N 11 N O N 12 N C N 13 R C N 14 N N N 15 N C N 16 N O N 17 N N N 18 N C N 19 N N N 20 N C N 21 N C N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N O N 37 N P N 38 N O N 39 N O N 40 N O N 41 N C N 42 R C N 43 N O N 44 S C N 45 N O N 46 N C N 47 R C Y 48 N N Y 49 N C Y 50 N N Y 51 N C N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N N Y 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N H N 75 N H N 76 N MG N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing Y 59 N sing Y 60 N sing Y 61 N doub N 62 N sing Y 63 N sing N 64 N sing Y 65 N doub N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing US J.Inorg.Biochem. JIBIDJ 0525 0162-0134 124 15 25 10.1016/j.jinorgbio.2013.03.004 23578858 Direct interactions between Z-DNA and alkaline earth cations, discovered in the presence of high concentrations of MgCl2 and CaCl2 2013 10.2210/pdb4fs5/pdb pdb_00004fs5 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2008-02-13 ADSC QUANTUM 315 Fixed exit Si (111) double crystal monochromator SINGLE WAVELENGTH M x-ray 1 1 1.0 BL38B1 SPring-8 1 SYNCHROTRON SPRING-8 BEAMLINE BL38B1 1810.205 DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') 2 syn polymer 24.305 MAGNESIUM ION 10 syn non-polymer 35.453 CHLORIDE ION 4 syn non-polymer 18.015 water 73 nat water no no (DC)(DG)(DC)(DG)(DC)(DG) CGCGCG A,B polydeoxyribonucleotide n n n n n n 1 2.00 38.62 TEMPERATURE CONTROL 7.0 2.0mM DNA, 20mM Na cacodylate, 30% 2-methyl-2,4-pentainediol, 500mM MgCl2, pH 7.0, TEMPERATURE CONTROL, temperature 293K 293 -2.372 1 19 A 1 B 12 0.020 A_DC1:DG12_B 1 -10.999 -0.240 0.103 -0.158 -8.408 1 19 A 2 B 11 0.833 A_DG2:DC11_B 2 0.067 0.278 -0.174 -0.124 3.515 1 19 A 3 B 10 1.307 A_DC3:DG10_B 3 -6.764 -0.258 -0.135 -0.081 -3.004 1 19 A 4 B 9 0.563 A_DG4:DC9_B 4 -6.202 0.266 -0.063 -0.063 7.558 1 19 A 5 B 8 2.545 A_DC5:DG8_B 5 -0.892 -0.262 -0.127 -0.150 4.568 1 19 A 6 B 7 0.846 A_DG6:DC7_B 6 -11.064 0.197 0.099 -0.134 5.785 -11.825 A A 1 2 33.431 B B 12 11 3.468 -6.473 0.285 5.460 AA_DC1DG2:DC11DG12_BB 1 1.940 10.021 -9.710 -13.038 5.417 3.098 -47.852 A A 2 3 5.812 B B 11 10 3.190 -4.707 0.101 -0.856 AA_DG2DC3:DG10DC11_BB 2 -0.958 -1.183 -47.624 1.415 0.051 6.226 -14.176 A A 3 4 38.134 B B 10 9 3.537 -8.739 -0.014 5.595 AA_DC3DG4:DC9DG10_BB 3 -0.385 -1.680 -11.166 -9.078 -0.657 3.080 -47.643 A A 4 5 6.857 B B 9 8 3.199 -5.528 -0.019 -0.920 AA_DG4DC5:DG8DC9_BB 4 0.564 0.700 -47.336 1.565 0.020 5.329 -11.701 A A 5 6 25.098 B B 8 7 3.435 -4.937 -0.294 5.459 AA_DC5DG6:DC7DG8_BB 5 -1.720 -8.746 -10.472 -17.235 -4.766 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2013-05-15 1 1 2023-11-08 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y PDBJ 2012-06-26 REL REL MG MAGNESIUM ION CL CHLORIDE ION HOH water Chemical synthesis sample 1IO5 PDB ENTRY 1IO5 PDB experimental model MG 1 2 MG MG 101 A MG 2 2 MG MG 102 A MG 3 2 MG MG 103 A MG 4 2 MG MG 104 A MG 5 2 MG MG 105 A MG 6 2 MG MG 106 A MG 7 2 MG MG 107 A MG 8 2 MG MG 108 A MG 10 2 MG MG 109 A CL 11 3 CL CL 110 A CL 12 3 CL CL 111 A MG 9 2 MG MG 101 B CL 13 3 CL CL 102 B CL 14 3 CL CL 103 B HOH 1 4 HOH HOH 201 A HOH 2 4 HOH HOH 202 A HOH 3 4 HOH HOH 203 A HOH 4 4 HOH HOH 204 A HOH 5 4 HOH HOH 205 A HOH 6 4 HOH HOH 206 A HOH 7 4 HOH HOH 207 A HOH 8 4 HOH HOH 208 A HOH 9 4 HOH HOH 209 A HOH 10 4 HOH HOH 210 A HOH 11 4 HOH HOH 211 A HOH 12 4 HOH HOH 212 A HOH 13 4 HOH HOH 213 A HOH 14 4 HOH HOH 214 A HOH 15 4 HOH HOH 215 A HOH 16 4 HOH HOH 216 A HOH 17 4 HOH HOH 217 A HOH 18 4 HOH HOH 218 A HOH 19 4 HOH HOH 219 A HOH 20 4 HOH HOH 220 A HOH 21 4 HOH HOH 221 A HOH 22 4 HOH HOH 222 A HOH 23 4 HOH HOH 223 A HOH 24 4 HOH HOH 224 A HOH 25 4 HOH HOH 225 A HOH 26 4 HOH HOH 226 A HOH 27 4 HOH HOH 227 A HOH 28 4 HOH HOH 228 A HOH 29 4 HOH HOH 229 A HOH 30 4 HOH HOH 230 A HOH 31 4 HOH HOH 231 A HOH 32 4 HOH HOH 232 A HOH 33 4 HOH HOH 233 A HOH 36 4 HOH HOH 234 A HOH 38 4 HOH HOH 235 A HOH 40 4 HOH HOH 236 A HOH 43 4 HOH HOH 237 A HOH 45 4 HOH HOH 238 A HOH 46 4 HOH HOH 239 A HOH 50 4 HOH HOH 240 A HOH 51 4 HOH HOH 241 A HOH 52 4 HOH HOH 242 A HOH 53 4 HOH HOH 243 A HOH 55 4 HOH HOH 244 A HOH 56 4 HOH HOH 245 A HOH 58 4 HOH HOH 246 A HOH 59 4 HOH HOH 247 A HOH 68 4 HOH HOH 248 A HOH 69 4 HOH HOH 249 A HOH 70 4 HOH HOH 250 A HOH 71 4 HOH HOH 251 A HOH 73 4 HOH HOH 252 A HOH 34 4 HOH HOH 201 B HOH 35 4 HOH HOH 202 B HOH 37 4 HOH HOH 203 B HOH 39 4 HOH HOH 204 B HOH 41 4 HOH HOH 205 B HOH 42 4 HOH HOH 206 B HOH 44 4 HOH HOH 207 B HOH 47 4 HOH HOH 208 B HOH 48 4 HOH HOH 209 B HOH 49 4 HOH HOH 210 B HOH 54 4 HOH HOH 211 B HOH 57 4 HOH HOH 212 B HOH 60 4 HOH HOH 213 B HOH 61 4 HOH HOH 214 B HOH 62 4 HOH HOH 215 B HOH 63 4 HOH HOH 216 B HOH 64 4 HOH HOH 217 B HOH 65 4 HOH HOH 218 B HOH 66 4 HOH HOH 219 B HOH 67 4 HOH HOH 220 B HOH 72 4 HOH HOH 221 B CYT 1 n 1 DC 1 A GUA 2 n 2 DG 2 A CYT 3 n 3 DC 3 A GUA 4 n 4 DG 4 A CYT 5 n 5 DC 5 A GUA 6 n 6 DG 6 A CYT 7 n 1 DC 7 B GUA 8 n 2 DG 8 B CYT 9 n 3 DC 9 B GUA 10 n 4 DG 10 B CYT 11 n 5 DC 11 B GUA 12 n 6 DG 12 B author_and_software_defined_assembly PISA 2 dimeric 2100 -110 2350 A DG 2 A OP1 DG 2 1_555 A MG 101 C MG MG 1_555 A HOH 201 Q O HOH 1_555 167.6 A DG 2 A OP1 DG 2 1_555 A MG 101 C MG MG 1_555 A HOH 202 Q O HOH 1_555 87.1 A HOH 201 Q O HOH 1_555 A MG 101 C MG MG 1_555 A HOH 202 Q O HOH 1_555 91.7 A DG 2 A OP1 DG 2 1_555 A MG 101 C MG MG 1_555 A HOH 203 Q O HOH 1_555 92.4 A HOH 201 Q O HOH 1_555 A MG 101 C MG MG 1_555 A HOH 203 Q O HOH 1_555 75.8 A HOH 202 Q O HOH 1_555 A MG 101 C MG MG 1_555 A HOH 203 Q O HOH 1_555 67.7 A DG 2 A OP1 DG 2 1_555 A MG 101 C MG MG 1_555 A HOH 204 Q O HOH 1_555 91.6 A HOH 201 Q O HOH 1_555 A MG 101 C MG MG 1_555 A HOH 204 Q O HOH 1_555 100.7 A HOH 202 Q O HOH 1_555 A MG 101 C MG MG 1_555 A HOH 204 Q O HOH 1_555 103.1 A HOH 203 Q O HOH 1_555 A MG 101 C MG MG 1_555 A HOH 204 Q O HOH 1_555 169.8 A DG 2 A OP2 DG 2 1_555 A MG 102 D MG MG 1_555 A HOH 205 Q O HOH 1_555 82.7 A DG 2 A OP2 DG 2 1_555 A MG 102 D MG MG 1_555 A HOH 206 Q O HOH 1_555 168.3 A HOH 205 Q O HOH 1_555 A MG 102 D MG MG 1_555 A HOH 206 Q O HOH 1_555 86.7 A DG 2 A OP2 DG 2 1_555 A MG 102 D MG MG 1_555 A HOH 207 Q O HOH 1_555 94.4 A HOH 205 Q O HOH 1_555 A MG 102 D MG MG 1_555 A HOH 207 Q O HOH 1_555 88.2 A HOH 206 Q O HOH 1_555 A MG 102 D MG MG 1_555 A HOH 207 Q O HOH 1_555 90.2 A DG 2 A OP2 DG 2 1_555 A MG 102 D MG MG 1_555 A HOH 208 Q O HOH 1_555 85.3 A HOH 205 Q O HOH 1_555 A MG 102 D MG MG 1_555 A HOH 208 Q O HOH 1_555 89.3 A HOH 206 Q O HOH 1_555 A MG 102 D MG MG 1_555 A HOH 208 Q O HOH 1_555 89.6 A HOH 207 Q O HOH 1_555 A MG 102 D MG MG 1_555 A HOH 208 Q O HOH 1_555 177.5 A DC 3 A OP1 DC 3 1_555 A MG 105 G MG MG 1_555 A HOH 217 Q O HOH 1_555 177.3 A DC 3 A OP1 DC 3 1_555 A MG 105 G MG MG 1_555 A HOH 218 Q O HOH 1_555 91.1 A HOH 217 Q O HOH 1_555 A MG 105 G MG MG 1_555 A HOH 218 Q O HOH 1_555 86.9 A DC 3 A OP1 DC 3 1_555 A MG 105 G MG MG 1_555 A HOH 219 Q O HOH 1_555 98.3 A HOH 217 Q O HOH 1_555 A MG 105 G MG MG 1_555 A HOH 219 Q O HOH 1_555 83.1 A HOH 218 Q O HOH 1_555 A MG 105 G MG MG 1_555 A HOH 219 Q O HOH 1_555 78.4 A DC 3 A OP1 DC 3 1_555 A MG 105 G MG MG 1_555 A HOH 220 Q O HOH 1_555 99.1 A HOH 217 Q O HOH 1_555 A MG 105 G MG MG 1_555 A HOH 220 Q O HOH 1_555 79.3 A HOH 218 Q O HOH 1_555 A MG 105 G MG MG 1_555 A HOH 220 Q O HOH 1_555 94.2 A HOH 219 Q O HOH 1_555 A MG 105 G MG MG 1_555 A HOH 220 Q O HOH 1_555 161.2 A DC 3 A OP2 DC 3 1_555 A MG 106 H MG MG 1_555 A HOH 221 Q O HOH 1_555 93.9 A DC 3 A OP2 DC 3 1_555 A MG 106 H MG MG 1_555 A HOH 222 Q O HOH 1_555 171.4 A HOH 221 Q O HOH 1_555 A MG 106 H MG MG 1_555 A HOH 222 Q O HOH 1_555 83.8 A DC 3 A OP2 DC 3 1_555 A MG 106 H MG MG 1_555 A HOH 223 Q O HOH 1_555 99.2 A HOH 221 Q O HOH 1_555 A MG 106 H MG MG 1_555 A HOH 223 Q O HOH 1_555 84.5 A HOH 222 Q O HOH 1_555 A MG 106 H MG MG 1_555 A HOH 223 Q O HOH 1_555 88.8 A DC 3 A OP2 DC 3 1_555 A MG 106 H MG MG 1_555 A HOH 224 Q O HOH 1_555 87.3 A HOH 221 Q O HOH 1_555 A MG 106 H MG MG 1_555 A HOH 224 Q O HOH 1_555 88.1 A HOH 222 Q O HOH 1_555 A MG 106 H MG MG 1_555 A HOH 224 Q O HOH 1_555 84.3 A HOH 223 Q O HOH 1_555 A MG 106 H MG MG 1_555 A HOH 224 Q O HOH 1_555 170.4 A DG 4 A OP1 DG 4 1_555 A MG 107 I MG MG 1_555 A HOH 225 Q O HOH 1_555 83.3 A DG 4 A OP1 DG 4 1_555 A MG 107 I MG MG 1_555 A HOH 226 Q O HOH 1_555 175.5 A HOH 225 Q O HOH 1_555 A MG 107 I MG MG 1_555 A HOH 226 Q O HOH 1_555 92.3 A DG 4 A OP1 DG 4 1_555 A MG 107 I MG MG 1_555 A HOH 227 Q O HOH 1_555 102.6 A HOH 225 Q O HOH 1_555 A MG 107 I MG MG 1_555 A HOH 227 Q O HOH 1_555 87.9 A HOH 226 Q O HOH 1_555 A MG 107 I MG MG 1_555 A HOH 227 Q O HOH 1_555 78.2 A DG 4 A OP1 DG 4 1_555 A MG 107 I MG MG 1_555 A HOH 228 Q O HOH 1_555 84.5 A HOH 225 Q O HOH 1_555 A MG 107 I MG MG 1_555 A HOH 228 Q O HOH 1_555 78.1 A HOH 226 Q O HOH 1_555 A MG 107 I MG MG 1_555 A HOH 228 Q O HOH 1_555 93.6 A HOH 227 Q O HOH 1_555 A MG 107 I MG MG 1_555 A HOH 228 Q O HOH 1_555 163.5 A DG 4 A OP2 DG 4 1_555 A MG 108 J MG MG 1_555 A HOH 229 Q O HOH 1_555 170.9 A DG 4 A OP2 DG 4 1_555 A MG 108 J MG MG 1_555 A HOH 230 Q O HOH 1_555 86.8 A HOH 229 Q O HOH 1_555 A MG 108 J MG MG 1_555 A HOH 230 Q O HOH 1_555 84.4 A DG 4 A OP2 DG 4 1_555 A MG 108 J MG MG 1_555 A HOH 231 Q O HOH 1_555 91.8 A HOH 229 Q O HOH 1_555 A MG 108 J MG MG 1_555 A HOH 231 Q O HOH 1_555 89.9 A HOH 230 Q O HOH 1_555 A MG 108 J MG MG 1_555 A HOH 231 Q O HOH 1_555 87.1 A DG 4 A OP2 DG 4 1_555 A MG 108 J MG MG 1_555 A HOH 232 Q O HOH 1_555 94.8 A HOH 229 Q O HOH 1_555 A MG 108 J MG MG 1_555 A HOH 232 Q O HOH 1_555 83.7 A HOH 230 Q O HOH 1_555 A MG 108 J MG MG 1_555 A HOH 232 Q O HOH 1_555 94.3 A HOH 231 Q O HOH 1_555 A MG 108 J MG MG 1_555 A HOH 232 Q O HOH 1_555 173.3 A DC 5 A OP1 DC 5 1_555 A MG 103 E MG MG 1_555 A HOH 209 Q O HOH 1_555 92.2 A DC 5 A OP1 DC 5 1_555 A MG 103 E MG MG 1_555 A HOH 210 Q O HOH 1_555 169.1 A HOH 209 Q O HOH 1_555 A MG 103 E MG MG 1_555 A HOH 210 Q O HOH 1_555 94.2 A DC 5 A OP1 DC 5 1_555 A MG 103 E MG MG 1_555 A HOH 211 Q O HOH 1_555 93.7 A HOH 209 Q O HOH 1_555 A MG 103 E MG MG 1_555 A HOH 211 Q O HOH 1_555 85.8 A HOH 210 Q O HOH 1_555 A MG 103 E MG MG 1_555 A HOH 211 Q O HOH 1_555 78.0 A DC 5 A OP1 DC 5 1_555 A MG 103 E MG MG 1_555 A HOH 212 Q O HOH 1_555 83.9 A HOH 209 Q O HOH 1_555 A MG 103 E MG MG 1_555 A HOH 212 Q O HOH 1_555 98.3 A HOH 210 Q O HOH 1_555 A MG 103 E MG MG 1_555 A HOH 212 Q O HOH 1_555 103.9 A HOH 211 Q O HOH 1_555 A MG 103 E MG MG 1_555 A HOH 212 Q O HOH 1_555 175.4 A DC 5 A OP2 DC 5 1_555 A MG 104 F MG MG 1_555 A HOH 213 Q O HOH 1_555 179.7 A DC 5 A OP2 DC 5 1_555 A MG 104 F MG MG 1_555 A HOH 214 Q O HOH 1_555 96.7 A HOH 213 Q O HOH 1_555 A MG 104 F MG MG 1_555 A HOH 214 Q O HOH 1_555 83.5 A DC 5 A OP2 DC 5 1_555 A MG 104 F MG MG 1_555 A HOH 215 Q O HOH 1_555 88.9 A HOH 213 Q O HOH 1_555 A MG 104 F MG MG 1_555 A HOH 215 Q O HOH 1_555 91.3 A HOH 214 Q O HOH 1_555 A MG 104 F MG MG 1_555 A HOH 215 Q O HOH 1_555 89.5 A DC 5 A OP2 DC 5 1_555 A MG 104 F MG MG 1_555 A HOH 216 Q O HOH 1_555 92.6 A HOH 213 Q O HOH 1_555 A MG 104 F MG MG 1_555 A HOH 216 Q O HOH 1_555 87.2 A HOH 214 Q O HOH 1_555 A MG 104 F MG MG 1_555 A HOH 216 Q O HOH 1_555 92.6 A HOH 215 Q O HOH 1_555 A MG 104 F MG MG 1_555 A HOH 216 Q O HOH 1_555 177.3 A HOH 236 Q O HOH 1_555 A MG 109 K MG MG 1_555 A HOH 237 Q O HOH 1_555 99.6 A HOH 236 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 204 R O HOH 1_555 91.2 A HOH 237 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 204 R O HOH 1_555 96.7 A HOH 236 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 205 R O HOH 1_555 80.4 A HOH 237 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 205 R O HOH 1_555 92.6 B HOH 204 R O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 205 R O HOH 1_555 168.4 A HOH 236 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 206 R O HOH 1_555 164.9 A HOH 237 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 206 R O HOH 1_555 89.1 B HOH 204 R O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 206 R O HOH 1_555 100.0 B HOH 205 R O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 206 R O HOH 1_555 86.9 A HOH 236 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 207 R O HOH 1_555 84.1 A HOH 237 Q O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 207 R O HOH 1_555 167.3 B HOH 204 R O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 207 R O HOH 1_555 95.4 B HOH 205 R O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 207 R O HOH 1_555 75.9 B HOH 206 R O HOH 1_555 A MG 109 K MG MG 1_555 B HOH 207 R O HOH 1_555 84.9 A HOH 233 Q O HOH 1_555 B MG 101 N MG MG 1_555 A HOH 234 Q O HOH 1_555 98.0 A HOH 233 Q O HOH 1_555 B MG 101 N MG MG 1_555 A HOH 235 Q O HOH 1_555 91.6 A HOH 234 Q O HOH 1_555 B MG 101 N MG MG 1_555 A HOH 235 Q O HOH 1_555 87.7 A HOH 233 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 201 R O HOH 1_555 83.8 A HOH 234 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 201 R O HOH 1_555 169.7 A HOH 235 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 201 R O HOH 1_555 82.1 A HOH 233 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 202 R O HOH 1_555 173.5 A HOH 234 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 202 R O HOH 1_555 86.2 A HOH 235 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 202 R O HOH 1_555 83.5 B HOH 201 R O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 202 R O HOH 1_555 91.2 A HOH 233 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 203 R O HOH 1_555 87.5 A HOH 234 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 203 R O HOH 1_555 89.7 A HOH 235 Q O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 203 R O HOH 1_555 177.1 B HOH 201 R O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 203 R O HOH 1_555 100.6 B HOH 202 R O HOH 1_555 B MG 101 N MG MG 1_555 B HOH 203 R O HOH 1_555 97.5 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A O O HOH HOH 202 203 2.13 1 -5.40 0.70 108.00 102.60 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 -3.34 0.50 128.60 125.26 A A A N3 C4 C5 DG DG DG 4 4 4 N 1 -4.28 0.70 108.00 103.72 A A A O4' C1' N9 DG DG DG 6 6 6 N 1 -4.44 0.70 108.00 103.56 B B B O4' C1' N9 DG DG DG 8 8 8 N 1 A A O3' C3' DG DG 2 2 -0.050 0.006 1.419 1.369 N 1 B B O3' C3' DG DG 8 8 -0.041 0.006 1.419 1.378 N 1 B A OP1 O DG HOH 12 243 2.14 1_555 1_565 30.130 14.8432 7.050 -0.5405 0.0000 -0.0000 -0.5405 0.0000 1.0809 0.2635 0.2109 0.2133 1.300 9.682 322 6815 4.72 98.60 1.000 1.000 0.7407 0.20 RABDOM 1 0.16 MOLECULAR REPLACEMENT 32.1200 0.49 0.80 PDB ENTRY 1IO5 ML FLAT BULK SOLVENT MODEL 94.456 0.600 1.300 9.682 73 327 14 240 0 0.014 268 1.849 410 0.082 46 0.015 12 29.583 112 0.2744 0.2038 1.6366 162 3235 3397 2 98.0000 0.2601 0.2129 9.6820 160 3258 3418 2 99.0000 12.3 1.3 24.2 4FS5 6915 6868 0 0 0.054 1 6.6 99.2 0.120 1.30 1.37 1006 1 6.6 99.0 data collection BSS phasing AMoRE refinement PHENIX (phenix.refine: 1.6.4_486) data reduction MOSFLM data scaling SCALA Crystal structure of the Z-DNA hexamer CGCGCG at 500 mM MgCl2 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N 2 N N 3 N N 3 N N 4 N N 4 N N metalc 2.234 A DG 2 A OP1 DG 2 1_555 A MG 101 C MG MG 1_555 metalc 1.916 A DG 2 A OP2 DG 2 1_555 A MG 102 D MG MG 1_555 metalc 1.945 A DC 3 A OP1 DC 3 1_555 A MG 105 G MG MG 1_555 metalc 1.860 A DC 3 A OP2 DC 3 1_555 A MG 106 H MG MG 1_555 metalc 2.129 A DG 4 A OP1 DG 4 1_555 A MG 107 I MG MG 1_555 metalc 2.069 A DG 4 A OP2 DG 4 1_555 A MG 108 J MG MG 1_555 metalc 2.192 A DC 5 A OP1 DC 5 1_555 A MG 103 E MG MG 1_555 metalc 2.167 A DC 5 A OP2 DC 5 1_555 A MG 104 F MG MG 1_555 metalc 2.164 A MG 101 C MG MG 1_555 A HOH 201 Q O HOH 1_555 metalc 1.911 A MG 101 C MG MG 1_555 A HOH 202 Q O HOH 1_555 metalc 1.910 A MG 101 C MG MG 1_555 A HOH 203 Q O HOH 1_555 metalc 2.188 A MG 101 C MG MG 1_555 A HOH 204 Q O HOH 1_555 metalc 2.158 A MG 102 D MG MG 1_555 A HOH 205 Q O HOH 1_555 metalc 2.027 A MG 102 D MG MG 1_555 A HOH 206 Q O HOH 1_555 metalc 2.137 A MG 102 D MG MG 1_555 A HOH 207 Q O HOH 1_555 metalc 2.193 A MG 102 D MG MG 1_555 A HOH 208 Q O HOH 1_555 metalc 2.175 A MG 103 E MG MG 1_555 A HOH 209 Q O HOH 1_555 metalc 1.887 A MG 103 E MG MG 1_555 A HOH 210 Q O HOH 1_555 metalc 2.060 A MG 103 E MG MG 1_555 A HOH 211 Q O HOH 1_555 metalc 2.246 A MG 103 E MG MG 1_555 A HOH 212 Q O HOH 1_555 metalc 2.136 A MG 104 F MG MG 1_555 A HOH 213 Q O HOH 1_555 metalc 1.839 A MG 104 F MG MG 1_555 A HOH 214 Q O HOH 1_555 metalc 1.989 A MG 104 F MG MG 1_555 A HOH 215 Q O HOH 1_555 metalc 2.084 A MG 104 F MG MG 1_555 A HOH 216 Q O HOH 1_555 metalc 2.232 A MG 105 G MG MG 1_555 A HOH 217 Q O HOH 1_555 metalc 2.106 A MG 105 G MG MG 1_555 A HOH 218 Q O HOH 1_555 metalc 2.106 A MG 105 G MG MG 1_555 A HOH 219 Q O HOH 1_555 metalc 2.035 A MG 105 G MG MG 1_555 A HOH 220 Q O HOH 1_555 metalc 2.036 A MG 106 H MG MG 1_555 A HOH 221 Q O HOH 1_555 metalc 2.269 A MG 106 H MG MG 1_555 A HOH 222 Q O HOH 1_555 metalc 1.971 A MG 106 H MG MG 1_555 A HOH 223 Q O HOH 1_555 metalc 2.157 A MG 106 H MG MG 1_555 A HOH 224 Q O HOH 1_555 metalc 2.229 A MG 107 I MG MG 1_555 A HOH 225 Q O HOH 1_555 metalc 2.202 A MG 107 I MG MG 1_555 A HOH 226 Q O HOH 1_555 metalc 2.034 A MG 107 I MG MG 1_555 A HOH 227 Q O HOH 1_555 metalc 2.153 A MG 107 I MG MG 1_555 A HOH 228 Q O HOH 1_555 metalc 1.988 A MG 108 J MG MG 1_555 A HOH 229 Q O HOH 1_555 metalc 2.117 A MG 108 J MG MG 1_555 A HOH 230 Q O HOH 1_555 metalc 2.125 A MG 108 J MG MG 1_555 A HOH 231 Q O HOH 1_555 metalc 2.165 A MG 108 J MG MG 1_555 A HOH 232 Q O HOH 1_555 metalc 2.164 A MG 109 K MG MG 1_555 A HOH 236 Q O HOH 1_555 metalc 2.143 A MG 109 K MG MG 1_555 A HOH 237 Q O HOH 1_555 metalc 2.096 A MG 109 K MG MG 1_555 B HOH 204 R O HOH 1_555 metalc 2.133 A MG 109 K MG MG 1_555 B HOH 205 R O HOH 1_555 metalc 2.208 A MG 109 K MG MG 1_555 B HOH 206 R O HOH 1_555 metalc 1.922 A MG 109 K MG MG 1_555 B HOH 207 R O HOH 1_555 metalc 2.089 A HOH 233 Q O HOH 1_555 B MG 101 N MG MG 1_555 metalc 2.094 A HOH 234 Q O HOH 1_555 B MG 101 N MG MG 1_555 metalc 2.013 A HOH 235 Q O HOH 1_555 B MG 101 N MG MG 1_555 metalc 2.113 B MG 101 N MG MG 1_555 B HOH 201 R O HOH 1_555 metalc 2.104 B MG 101 N MG MG 1_555 B HOH 202 R O HOH 1_555 metalc 2.106 B MG 101 N MG MG 1_555 B HOH 203 R O HOH 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 12 B N1 DG 6 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 12 B O6 DG 6 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 12 B N2 DG 6 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 11 B N3 DC 5 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 11 B O2 DC 5 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 11 B N4 DC 5 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 10 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 10 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 10 B N2 DG 4 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 9 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 9 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 9 B N4 DC 3 1_555 hydrog WATSON-CRICK A DC 5 A N3 DC 5 1_555 B DG 8 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 5 A N4 DC 5 1_555 B DG 8 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 5 A O2 DC 5 1_555 B DG 8 B N2 DG 2 1_555 hydrog WATSON-CRICK A DG 6 A N1 DG 6 1_555 B DC 7 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 6 A N2 DG 6 1_555 B DC 7 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 6 A O6 DG 6 1_555 B DC 7 B N4 DC 1 1_555 DNA Z-DNA, Mg2+ binding, DNA 4FS5 PDB 1 4FS5 1 6 4FS5 1 6 4FS5 A 1 1 6 7 12 4FS5 7 12 4FS5 B 1 1 6 BINDING SITE FOR RESIDUE MG A 101 A MG 101 Software 6 BINDING SITE FOR RESIDUE MG A 102 A MG 102 Software 6 BINDING SITE FOR RESIDUE MG A 103 A MG 103 Software 6 BINDING SITE FOR RESIDUE MG A 104 A MG 104 Software 6 BINDING SITE FOR RESIDUE MG A 105 A MG 105 Software 6 BINDING SITE FOR RESIDUE MG A 106 A MG 106 Software 6 BINDING SITE FOR RESIDUE MG A 107 A MG 107 Software 6 BINDING SITE FOR RESIDUE MG A 108 A MG 108 Software 6 BINDING SITE FOR RESIDUE MG A 109 A MG 109 Software 6 BINDING SITE FOR RESIDUE CL A 110 A CL 110 Software 2 BINDING SITE FOR RESIDUE CL A 111 A CL 111 Software 2 BINDING SITE FOR RESIDUE MG B 101 B MG 101 Software 6 BINDING SITE FOR RESIDUE CL B 102 B CL 102 Software 2 BINDING SITE FOR RESIDUE CL B 103 B CL 103 Software 3 A DG 2 A DG 2 6 1_555 A HOH 201 Q HOH 6 1_555 A HOH 202 Q HOH 6 1_555 A HOH 203 Q HOH 6 1_555 A HOH 204 Q HOH 6 1_555 B DC 11 B DC 5 6 1_445 A DG 2 A DG 2 6 1_555 A HOH 205 Q HOH 6 1_555 A HOH 206 Q HOH 6 1_555 A HOH 207 Q HOH 6 1_555 A HOH 208 Q HOH 6 1_555 B DC 11 B DC 5 6 1_445 A DC 5 A DC 5 6 1_555 A HOH 209 Q HOH 6 1_555 A HOH 210 Q HOH 6 1_555 A HOH 211 Q HOH 6 1_555 A HOH 212 Q HOH 6 1_555 B DG 8 B DG 2 6 1_455 A DC 5 A DC 5 6 1_555 A HOH 213 Q HOH 6 1_555 A HOH 214 Q HOH 6 1_555 A HOH 215 Q HOH 6 1_555 A HOH 216 Q HOH 6 1_555 B DG 8 B DG 2 6 1_455 A DC 3 A DC 3 6 1_555 A HOH 217 Q HOH 6 1_555 A HOH 218 Q HOH 6 1_555 A HOH 219 Q HOH 6 1_555 A HOH 220 Q HOH 6 1_555 B DG 10 B DG 4 6 1_445 A DC 3 A DC 3 6 1_555 A HOH 221 Q HOH 6 1_555 A HOH 222 Q HOH 6 1_555 A HOH 223 Q HOH 6 1_555 A HOH 224 Q HOH 6 1_555 B DG 10 B DG 4 6 1_445 A DG 4 A DG 4 6 1_555 A HOH 225 Q HOH 6 1_555 A HOH 226 Q HOH 6 1_555 A HOH 227 Q HOH 6 1_555 A HOH 228 Q HOH 6 1_555 B DC 9 B DC 3 6 1_455 A DG 4 A DG 4 6 1_555 A HOH 229 Q HOH 6 1_555 A HOH 230 Q HOH 6 1_555 A HOH 231 Q HOH 6 1_555 A HOH 232 Q HOH 6 1_555 B DC 9 B DC 3 6 1_455 A HOH 236 Q HOH 6 1_555 A HOH 237 Q HOH 6 1_555 B HOH 204 R HOH 6 1_555 B HOH 205 R HOH 6 1_555 B HOH 206 R HOH 6 1_555 B HOH 207 R HOH 6 1_555 A DG 2 A DG 2 2 1_555 A DC 3 A DC 3 2 1_555 A DG 4 A DG 4 2 1_555 A DC 5 A DC 5 2 1_555 A HOH 233 Q HOH 6 1_555 A HOH 234 Q HOH 6 1_555 A HOH 235 Q HOH 6 1_555 B HOH 201 R HOH 6 1_555 B HOH 202 R HOH 6 1_555 B HOH 203 R HOH 6 1_555 B DG 8 B DG 2 2 1_555 B DC 9 B DC 3 2 1_555 B DG 10 B DG 4 3 1_555 B DC 11 B DC 5 3 1_555 B HOH 220 R HOH 3 1_555 145 P 32