0.017315 0.000000 0.000000 0.000000 0.012534 0.000000 0.000000 0.000000 0.009203 0.00000 0.00000 0.00000 Ni, Z. Xu, C. Tempel, W. El Bakkouri, M. Loppnau, P. Guo, X. Bountra, C. Arrowsmith, C.H. Edwards, A.M. Min, J. Greenblatt, J.F. Structural Genomics Consortium (SGC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 57.752 79.784 108.666 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking UNKNOWN ATOM OR ION non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CL N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 S C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N O N 236 N C N 237 N C N 238 N SE N 239 N C N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 R C N 310 N O N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N N Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing TO BE PUBLISHED 0353 CID of human RPRD1B 10.2210/pdb4fu3/pdb pdb_00004fu3 100 1 1 CCD 2011-10-19 ADSC QUANTUM 270 SINGLE WAVELENGTH M x-ray 1 0.9179 1.0 F1 CHESS 0.9179 SYNCHROTRON CHESS BEAMLINE F1 15597.543 Regulation of nuclear pre-mRNA domain-containing protein 1B UNP residues 2-235 2 man polymer 35.453 CHLORIDE ION 3 syn non-polymer UNKNOWN ATOM OR ION 10 syn non-polymer 18.015 water 76 nat water Cell cycle-related and expression-elevated protein in tumor no yes GSSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNSKRKGPEFTRE FESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLKLS(MSE)EDSKSP GSSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNSKRKGPEFTRE FESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLKLSMEDSKSP A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample RPRD1B, C20orf77, CREPT 9606 Homo sapiens 511693 Escherichia coli BL21 plasmid pET15 MHL 1 2.1 41.7 VAPOR DIFFUSION 8.5 30% PEG-4000, 0.2M magnesium chloride, 0.1M TRIS hydrochloride, pH 8.5, vapor diffusion, temperature 291K 291 Structural Genomics Consortium SGC chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq_dif struct_site repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2012-08-29 1 1 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2012-06-28 REL REL CL CHLORIDE ION UNX UNKNOWN ATOM OR ION HOH water unpublished model of same protein, different crystal form Other experimental model CL 1 2 CL CL 201 A CL 3 2 CL CL 202 A UNX 3 3 UNX UNX 203 A UNX 5 3 UNX UNX 204 A UNX 6 3 UNX UNX 205 A UNX 7 3 UNX UNX 206 A UNX 9 3 UNX UNX 207 A UNX 10 3 UNX UNX 208 A CL 2 2 CL CL 201 B UNX 1 3 UNX UNX 202 B UNX 2 3 UNX UNX 203 B UNX 8 3 UNX UNX 204 B UNX 11 3 UNX UNX 205 B HOH 6 4 HOH HOH 301 A HOH 7 4 HOH HOH 302 A HOH 8 4 HOH HOH 303 A HOH 9 4 HOH HOH 304 A HOH 13 4 HOH HOH 305 A HOH 14 4 HOH HOH 306 A HOH 17 4 HOH HOH 307 A HOH 18 4 HOH HOH 308 A HOH 19 4 HOH HOH 309 A HOH 21 4 HOH HOH 310 A HOH 25 4 HOH HOH 311 A HOH 26 4 HOH HOH 312 A HOH 31 4 HOH HOH 313 A HOH 33 4 HOH HOH 314 A HOH 34 4 HOH HOH 315 A HOH 37 4 HOH HOH 316 A HOH 42 4 HOH HOH 317 A HOH 43 4 HOH HOH 318 A HOH 46 4 HOH HOH 319 A HOH 47 4 HOH HOH 320 A HOH 48 4 HOH HOH 321 A HOH 61 4 HOH HOH 322 A HOH 62 4 HOH HOH 323 A HOH 64 4 HOH HOH 324 A HOH 65 4 HOH HOH 325 A HOH 66 4 HOH HOH 326 A HOH 68 4 HOH HOH 327 A HOH 71 4 HOH HOH 328 A HOH 73 4 HOH HOH 329 A HOH 78 4 HOH HOH 330 A HOH 79 4 HOH HOH 331 A HOH 80 4 HOH HOH 332 A HOH 81 4 HOH HOH 333 A HOH 83 4 HOH HOH 334 A HOH 84 4 HOH HOH 335 A HOH 85 4 HOH HOH 336 A HOH 97 4 HOH HOH 337 A HOH 98 4 HOH HOH 338 A HOH 3 4 HOH HOH 301 B HOH 5 4 HOH HOH 302 B HOH 10 4 HOH HOH 303 B HOH 12 4 HOH HOH 304 B HOH 15 4 HOH HOH 305 B HOH 16 4 HOH HOH 306 B HOH 24 4 HOH HOH 307 B HOH 30 4 HOH HOH 308 B HOH 36 4 HOH HOH 309 B HOH 38 4 HOH HOH 310 B HOH 40 4 HOH HOH 311 B HOH 41 4 HOH HOH 312 B HOH 49 4 HOH HOH 313 B HOH 50 4 HOH HOH 314 B HOH 52 4 HOH HOH 315 B HOH 54 4 HOH HOH 316 B HOH 55 4 HOH HOH 317 B HOH 56 4 HOH HOH 318 B HOH 57 4 HOH HOH 319 B HOH 63 4 HOH HOH 320 B HOH 67 4 HOH HOH 321 B HOH 69 4 HOH HOH 322 B HOH 70 4 HOH HOH 323 B HOH 72 4 HOH HOH 324 B HOH 74 4 HOH HOH 325 B HOH 75 4 HOH HOH 326 B HOH 77 4 HOH HOH 327 B HOH 82 4 HOH HOH 328 B HOH 86 4 HOH HOH 329 B HOH 87 4 HOH HOH 330 B HOH 88 4 HOH HOH 331 B HOH 90 4 HOH HOH 332 B HOH 91 4 HOH HOH 333 B HOH 92 4 HOH HOH 334 B HOH 93 4 HOH HOH 335 B HOH 95 4 HOH HOH 336 B HOH 99 4 HOH HOH 337 B HOH 100 4 HOH HOH 338 B n 1 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A PHE 4 n 4 PHE 4 A SER 5 n 5 SER 5 A GLU 6 n 6 GLU 6 A SER 7 n 7 SER 7 A ALA 8 n 8 ALA 8 A LEU 9 n 9 LEU 9 A GLU 10 n 10 GLU 10 A LYS 11 n 11 LYS 11 A LYS 12 n 12 LYS 12 A LEU 13 n 13 LEU 13 A SER 14 n 14 SER 14 A GLU 15 n 15 GLU 15 A LEU 16 n 16 LEU 16 A SER 17 n 17 SER 17 A ASN 18 n 18 ASN 18 A SER 19 n 19 SER 19 A GLN 20 n 20 GLN 20 A GLN 21 n 21 GLN 21 A SER 22 n 22 SER 22 A VAL 23 n 23 VAL 23 A GLN 24 n 24 GLN 24 A THR 25 n 25 THR 25 A LEU 26 n 26 LEU 26 A SER 27 n 27 SER 27 A LEU 28 n 28 LEU 28 A TRP 29 n 29 TRP 29 A LEU 30 n 30 LEU 30 A ILE 31 n 31 ILE 31 A HIS 32 n 32 HIS 32 A HIS 33 n 33 HIS 33 A ARG 34 n 34 ARG 34 A LYS 35 n 35 LYS 35 A HIS 36 n 36 HIS 36 A ALA 37 n 37 ALA 37 A GLY 38 n 38 GLY 38 A PRO 39 n 39 PRO 39 A ILE 40 n 40 ILE 40 A VAL 41 n 41 VAL 41 A SER 42 n 42 SER 42 A VAL 43 n 43 VAL 43 A TRP 44 n 44 TRP 44 A HIS 45 n 45 HIS 45 A ARG 46 n 46 ARG 46 A GLU 47 n 47 GLU 47 A LEU 48 n 48 LEU 48 A ARG 49 n 49 ARG 49 A LYS 50 n 50 LYS 50 A ALA 51 n 51 ALA 51 A LYS 52 n 52 LYS 52 A SER 53 n 53 SER 53 A ASN 54 n 54 ASN 54 A ARG 55 n 55 ARG 55 A LYS 56 n 56 LYS 56 A LEU 57 n 57 LEU 57 A THR 58 n 58 THR 58 A PHE 59 n 59 PHE 59 A LEU 60 n 60 LEU 60 A TYR 61 n 61 TYR 61 A LEU 62 n 62 LEU 62 A ALA 63 n 63 ALA 63 A ASN 64 n 64 ASN 64 A ASP 65 n 65 ASP 65 A VAL 66 n 66 VAL 66 A ILE 67 n 67 ILE 67 A GLN 68 n 68 GLN 68 A ASN 69 n 69 ASN 69 A SER 70 n 70 SER 70 A LYS 71 n 71 LYS 71 A ARG 72 n 72 ARG 72 A LYS 73 n 73 LYS 73 A GLY 74 n 74 GLY 74 A PRO 75 n 75 PRO 75 A GLU 76 n 76 GLU 76 A PHE 77 n 77 PHE 77 A THR 78 n 78 THR 78 A ARG 79 n 79 ARG 79 A GLU 80 n 80 GLU 80 A PHE 81 n 81 PHE 81 A GLU 82 n 82 GLU 82 A SER 83 n 83 SER 83 A VAL 84 n 84 VAL 84 A LEU 85 n 85 LEU 85 A VAL 86 n 86 VAL 86 A ASP 87 n 87 ASP 87 A ALA 88 n 88 ALA 88 A PHE 89 n 89 PHE 89 A SER 90 n 90 SER 90 A HIS 91 n 91 HIS 91 A VAL 92 n 92 VAL 92 A ALA 93 n 93 ALA 93 A ARG 94 n 94 ARG 94 A GLU 95 n 95 GLU 95 A ALA 96 n 96 ALA 96 A ASP 97 n 97 ASP 97 A GLU 98 n 98 GLU 98 A GLY 99 n 99 GLY 99 A CYS 100 n 100 CYS 100 A LYS 101 n 101 LYS 101 A LYS 102 n 102 LYS 102 A PRO 103 n 103 PRO 103 A LEU 104 n 104 LEU 104 A GLU 105 n 105 GLU 105 A ARG 106 n 106 ARG 106 A LEU 107 n 107 LEU 107 A LEU 108 n 108 LEU 108 A ASN 109 n 109 ASN 109 A ILE 110 n 110 ILE 110 A TRP 111 n 111 TRP 111 A GLN 112 n 112 GLN 112 A GLU 113 n 113 GLU 113 A ARG 114 n 114 ARG 114 A SER 115 n 115 SER 115 A VAL 116 n 116 VAL 116 A TYR 117 n 117 TYR 117 A GLY 118 n 118 GLY 118 A GLY 119 n 119 GLY 119 A GLU 120 n 120 GLU 120 A PHE 121 n 121 PHE 121 A ILE 122 n 122 ILE 122 A GLN 123 n 123 GLN 123 A GLN 124 n 124 GLN 124 A LEU 125 n 125 LEU 125 A LYS 126 n 126 LYS 126 A LEU 127 n 127 LEU 127 A SER 128 n 128 SER 128 A MSE 129 n 129 MSE 129 A n 130 130 A n 131 131 A n 132 132 A n 133 133 A n 134 134 A n 135 135 A n 1 1 B SER 2 n 2 SER 2 B SER 3 n 3 SER 3 B PHE 4 n 4 PHE 4 B SER 5 n 5 SER 5 B GLU 6 n 6 GLU 6 B SER 7 n 7 SER 7 B ALA 8 n 8 ALA 8 B LEU 9 n 9 LEU 9 B GLU 10 n 10 GLU 10 B LYS 11 n 11 LYS 11 B LYS 12 n 12 LYS 12 B LEU 13 n 13 LEU 13 B SER 14 n 14 SER 14 B GLU 15 n 15 GLU 15 B LEU 16 n 16 LEU 16 B SER 17 n 17 SER 17 B ASN 18 n 18 ASN 18 B SER 19 n 19 SER 19 B GLN 20 n 20 GLN 20 B GLN 21 n 21 GLN 21 B SER 22 n 22 SER 22 B VAL 23 n 23 VAL 23 B GLN 24 n 24 GLN 24 B THR 25 n 25 THR 25 B LEU 26 n 26 LEU 26 B SER 27 n 27 SER 27 B LEU 28 n 28 LEU 28 B TRP 29 n 29 TRP 29 B LEU 30 n 30 LEU 30 B ILE 31 n 31 ILE 31 B HIS 32 n 32 HIS 32 B HIS 33 n 33 HIS 33 B ARG 34 n 34 ARG 34 B LYS 35 n 35 LYS 35 B HIS 36 n 36 HIS 36 B ALA 37 n 37 ALA 37 B GLY 38 n 38 GLY 38 B PRO 39 n 39 PRO 39 B ILE 40 n 40 ILE 40 B VAL 41 n 41 VAL 41 B SER 42 n 42 SER 42 B VAL 43 n 43 VAL 43 B TRP 44 n 44 TRP 44 B HIS 45 n 45 HIS 45 B ARG 46 n 46 ARG 46 B GLU 47 n 47 GLU 47 B LEU 48 n 48 LEU 48 B ARG 49 n 49 ARG 49 B LYS 50 n 50 LYS 50 B ALA 51 n 51 ALA 51 B LYS 52 n 52 LYS 52 B SER 53 n 53 SER 53 B ASN 54 n 54 ASN 54 B ARG 55 n 55 ARG 55 B LYS 56 n 56 LYS 56 B LEU 57 n 57 LEU 57 B THR 58 n 58 THR 58 B PHE 59 n 59 PHE 59 B LEU 60 n 60 LEU 60 B TYR 61 n 61 TYR 61 B LEU 62 n 62 LEU 62 B ALA 63 n 63 ALA 63 B ASN 64 n 64 ASN 64 B ASP 65 n 65 ASP 65 B VAL 66 n 66 VAL 66 B ILE 67 n 67 ILE 67 B GLN 68 n 68 GLN 68 B ASN 69 n 69 ASN 69 B SER 70 n 70 SER 70 B LYS 71 n 71 LYS 71 B ARG 72 n 72 ARG 72 B LYS 73 n 73 LYS 73 B GLY 74 n 74 GLY 74 B PRO 75 n 75 PRO 75 B GLU 76 n 76 GLU 76 B PHE 77 n 77 PHE 77 B THR 78 n 78 THR 78 B ARG 79 n 79 ARG 79 B GLU 80 n 80 GLU 80 B PHE 81 n 81 PHE 81 B GLU 82 n 82 GLU 82 B SER 83 n 83 SER 83 B VAL 84 n 84 VAL 84 B LEU 85 n 85 LEU 85 B VAL 86 n 86 VAL 86 B ASP 87 n 87 ASP 87 B ALA 88 n 88 ALA 88 B PHE 89 n 89 PHE 89 B SER 90 n 90 SER 90 B HIS 91 n 91 HIS 91 B VAL 92 n 92 VAL 92 B ALA 93 n 93 ALA 93 B ARG 94 n 94 ARG 94 B GLU 95 n 95 GLU 95 B ALA 96 n 96 ALA 96 B ASP 97 n 97 ASP 97 B GLU 98 n 98 GLU 98 B GLY 99 n 99 GLY 99 B CYS 100 n 100 CYS 100 B LYS 101 n 101 LYS 101 B LYS 102 n 102 LYS 102 B PRO 103 n 103 PRO 103 B LEU 104 n 104 LEU 104 B GLU 105 n 105 GLU 105 B ARG 106 n 106 ARG 106 B LEU 107 n 107 LEU 107 B LEU 108 n 108 LEU 108 B ASN 109 n 109 ASN 109 B ILE 110 n 110 ILE 110 B TRP 111 n 111 TRP 111 B GLN 112 n 112 GLN 112 B GLU 113 n 113 GLU 113 B ARG 114 n 114 ARG 114 B SER 115 n 115 SER 115 B VAL 116 n 116 VAL 116 B TYR 117 n 117 TYR 117 B GLY 118 n 118 GLY 118 B GLY 119 n 119 GLY 119 B GLU 120 n 120 GLU 120 B PHE 121 n 121 PHE 121 B ILE 122 n 122 ILE 122 B GLN 123 n 123 GLN 123 B GLN 124 n 124 GLN 124 B LEU 125 n 125 LEU 125 B LYS 126 n 126 LYS 126 B LEU 127 n 127 LEU 127 B SER 128 n 128 SER 128 B MSE 129 n 129 MSE 129 B n 130 130 B n 131 131 B n 132 132 B n 133 133 B n 134 134 B n 135 135 B 0.4223 0.1830 0.0073 0.3120 0.1492 1.1042 -0.0014 0.0063 0.0788 0.0249 -0.1019 0.1063 -0.0927 -0.1440 0.1033 -0.0566 0.0615 0.0232 -0.1171 0.0127 0.1246 refined -6.3327 17.6681 17.2787 X-RAY DIFFRACTION 1.3556 0.5717 -0.6850 0.2002 -0.3705 2.3531 0.0009 0.0718 -0.0955 0.0855 -0.0399 0.0443 0.1322 0.3273 0.0390 -0.0300 0.0860 -0.0321 -0.0549 0.0002 -0.0321 refined 11.1434 2.6517 23.2685 X-RAY DIFFRACTION A 2 A 129 X-RAY DIFFRACTION 1 { A|* } B 2 B 129 X-RAY DIFFRACTION 2 { B|* } software_defined_assembly PISA 4 tetrameric software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 2 dimeric 10600 -71 22700 2970 -34 13580 3070 -34 13680 A MSE 129 SELENOMETHIONINE A MSE 129 MET B MSE 129 SELENOMETHIONINE B MSE 129 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_555 -x,y,-z+1/2 crystal symmetry operation 0.0000000000 0.0000000000 54.3330000000 1 A N SER 2 A N SER 2 1 Y 1 A CA SER 2 A CA SER 2 1 Y 1 A CB SER 2 A CB SER 2 1 Y 1 A OG SER 2 A OG SER 2 1 Y 1 A OG SER 3 A OG SER 3 1 Y 1 A OG SER 7 A OG SER 7 1 Y 1 A CD LYS 11 A CD LYS 11 1 Y 1 A CE LYS 11 A CE LYS 11 1 Y 1 A NZ LYS 11 A NZ LYS 11 1 Y 1 A OG SER 14 A OG SER 14 1 Y 1 A CG GLU 15 A CG GLU 15 1 Y 1 A CD GLU 15 A CD GLU 15 1 Y 1 A OE1 GLU 15 A OE1 GLU 15 1 Y 1 A OE2 GLU 15 A OE2 GLU 15 1 Y 1 A CG ASN 18 A CG ASN 18 1 Y 1 A OD1 ASN 18 A OD1 ASN 18 1 Y 1 A ND2 ASN 18 A ND2 ASN 18 1 Y 1 A OG SER 19 A OG SER 19 1 Y 1 A CD LYS 35 A CD LYS 35 1 Y 1 A CE LYS 35 A CE LYS 35 1 Y 1 A NZ LYS 35 A NZ LYS 35 1 Y 1 A NZ LYS 50 A NZ LYS 50 1 Y 1 A CG LYS 52 A CG LYS 52 1 Y 1 A CD LYS 52 A CD LYS 52 1 Y 1 A CE LYS 52 A CE LYS 52 1 Y 1 A NZ LYS 52 A NZ LYS 52 1 Y 1 A OG SER 53 A OG SER 53 1 Y 1 A CG ASN 54 A CG ASN 54 1 Y 1 A OD1 ASN 54 A OD1 ASN 54 1 Y 1 A ND2 ASN 54 A ND2 ASN 54 1 Y 1 A CZ ARG 55 A CZ ARG 55 1 Y 1 A NH1 ARG 55 A NH1 ARG 55 1 Y 1 A NH2 ARG 55 A NH2 ARG 55 1 Y 1 A CG ASP 97 A CG ASP 97 1 Y 1 A OD1 ASP 97 A OD1 ASP 97 1 Y 1 A OD2 ASP 97 A OD2 ASP 97 1 Y 1 A CD GLU 98 A CD GLU 98 1 Y 1 A OE1 GLU 98 A OE1 GLU 98 1 Y 1 A OE2 GLU 98 A OE2 GLU 98 1 Y 1 A CG LYS 101 A CG LYS 101 1 Y 1 A CD LYS 101 A CD LYS 101 1 Y 1 A CE LYS 101 A CE LYS 101 1 Y 1 A NZ LYS 101 A NZ LYS 101 1 Y 1 A CG LYS 102 A CG LYS 102 1 Y 1 A CD LYS 102 A CD LYS 102 1 Y 1 A CE LYS 102 A CE LYS 102 1 Y 1 A NZ LYS 102 A NZ LYS 102 1 Y 1 A CG GLU 120 A CG GLU 120 1 Y 1 A CD GLU 120 A CD GLU 120 1 Y 1 A OE1 GLU 120 A OE1 GLU 120 1 Y 1 A OE2 GLU 120 A OE2 GLU 120 1 Y 1 B OG SER 2 B OG SER 2 1 Y 1 B CD LYS 35 B CD LYS 35 1 Y 1 B CE LYS 35 B CE LYS 35 1 Y 1 B NZ LYS 35 B NZ LYS 35 1 Y 1 B CG LYS 52 B CG LYS 52 1 Y 1 B CD LYS 52 B CD LYS 52 1 Y 1 B CE LYS 52 B CE LYS 52 1 Y 1 B NZ LYS 52 B NZ LYS 52 1 Y 1 B OG SER 53 B OG SER 53 1 Y 1 B CG ASN 54 B CG ASN 54 1 Y 1 B OD1 ASN 54 B OD1 ASN 54 1 Y 1 B ND2 ASN 54 B ND2 ASN 54 1 Y 1 B NZ LYS 73 B NZ LYS 73 1 Y 1 B CG GLU 98 B CG GLU 98 1 Y 1 B CD GLU 98 B CD GLU 98 1 Y 1 B OE1 GLU 98 B OE1 GLU 98 1 Y 1 B OE2 GLU 98 B OE2 GLU 98 1 Y 1 B CG LYS 101 B CG LYS 101 1 Y 1 B CD LYS 101 B CD LYS 101 1 Y 1 B CE LYS 101 B CE LYS 101 1 Y 1 B NZ LYS 101 B NZ LYS 101 1 Y 1 B CG LYS 102 B CG LYS 102 1 Y 1 B CD LYS 102 B CD LYS 102 1 Y 1 B CE LYS 102 B CE LYS 102 1 Y 1 B NZ LYS 102 B NZ LYS 102 1 Y 1 B CG1 VAL 116 B CG1 VAL 116 1 Y 1 B CG2 VAL 116 B CG2 VAL 116 1 Y 1 B CD1 LEU 127 B CD1 LEU 127 1 Y 1 B CD2 LEU 127 B CD2 LEU 127 1 Y 1 A GLY 1 A GLY 1 1 Y 1 A GLU 130 A GLU 130 1 Y 1 A ASP 131 A ASP 131 1 Y 1 A SER 132 A SER 132 1 Y 1 A LYS 133 A LYS 133 1 Y 1 A SER 134 A SER 134 1 Y 1 A PRO 135 A PRO 135 1 Y 1 B GLY 1 B GLY 1 1 Y 1 B GLU 130 B GLU 130 1 Y 1 B ASP 131 B ASP 131 1 Y 1 B SER 132 B SER 132 1 Y 1 B LYS 133 B LYS 133 1 Y 1 B SER 134 B SER 134 1 Y 1 B PRO 135 B PRO 135 1 Y 1 A A OE1 UNK GLU UNX 47 203 2.19 1 A SER 17 -106.96 -166.84 1 A HIS 33 -97.37 36.45 1 A GLU 98 -66.19 96.96 1 B HIS 33 -96.84 36.09 107.050 37.5815 16.610 0.4705 0.0000 0.0000 -1.5618 0.0000 1.0913 0.9456 0.8974 DM, PARROT, ARP/WARP, REFMAC, COOT and the MOLPROBITY server were also used. 0.2589 0.2090 0.2116 1.9000 19.7700 1048 20125 5.2100 99.9400 1.000 0.500 0.1700 THIN SHELLS (SFTOOLS) 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT unpublished model of same protein, different crystal form 0.301 1.9000 19.7700 76 2101 13 0 2012 752 SINUSOIDAL 2.000 50 HARMONIC 2.000 314 HARMONIC 5.000 2098 HARMONIC 20.000 0 SEMIHARMONIC 5.000 267 SEMIHARMONIC 5.000 2509 SEMIHARMONIC 4.000 0.010 2098 HARMONIC 2.000 1.000 2840 HARMONIC 2.000 2.630 18.360 0.2287 0.2205 0.2209 2.0000 129 2743 2872 10 4.4900 99.9400 1.90 46.78 4FU3 20170 0.070 1 19.6638 7.19 99.95 0.98 1.90 2.00 20438 2875 1 7.11 99.96 0.53 2.00 2.12 20050 2785 1 7.20 99.98 0.31 2.12 2.27 18736 2570 1 7.29 99.98 0.19 2.27 2.45 17782 2427 1 7.33 100.00 0.12 2.45 2.69 16295 2223 1 7.33 100.00 0.07 2.69 3.00 14881 2032 1 7.32 100.00 0.04 3.00 3.47 13089 1797 1 7.28 100.00 0.03 3.47 4.25 11079 1544 1 7.18 100.00 0.03 4.25 6.01 8432 1217 1 6.93 100.00 0.03 6.01 46.78 4163 700 1 5.95 98.82 data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 2011/05/18 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other CCP4_3.3.20 phasing Alexei Vaguine alexei@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/molrep.html MOLREP program refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER-TNT program BUSTER 2.10.0 data extraction PDB deposit@deposit.rcsb.org August 3, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data reduction XDS refinement BUSTER 2.10.0 CID of human RPRD1B 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N A SER 5 A SER 5 HELX_P A LEU 16 A LEU 16 1 1 12 A GLN 21 A GLN 21 HELX_P A HIS 33 A HIS 33 1 2 13 A HIS 36 A HIS 36 HELX_P A ALA 51 A ALA 51 1 3 16 A ARG 55 A ARG 55 HELX_P A LYS 71 A LYS 71 1 4 17 A PRO 75 A PRO 75 HELX_P A SER 83 A SER 83 1 5 9 A VAL 84 A VAL 84 HELX_P A GLU 98 A GLU 98 1 6 15 A LYS 101 A LYS 101 HELX_P A ARG 114 A ARG 114 1 7 14 A GLY 118 A GLY 118 HELX_P A SER 128 A SER 128 1 8 11 B SER 5 B SER 5 HELX_P B GLU 15 B GLU 15 1 9 11 B SER 19 B SER 19 HELX_P B HIS 33 B HIS 33 1 10 15 B HIS 36 B HIS 36 HELX_P B ALA 51 B ALA 51 1 11 16 B LYS 52 B LYS 52 HELX_P B ASN 54 B ASN 54 5 12 3 B ARG 55 B ARG 55 HELX_P B LYS 71 B LYS 71 1 13 17 B PRO 75 B PRO 75 HELX_P B GLY 99 B GLY 99 1 14 25 B LYS 101 B LYS 101 HELX_P B SER 115 B SER 115 1 15 15 B GLY 118 B GLY 118 HELX_P B SER 128 B SER 128 1 16 11 disulf 2.036 A CYS 100 A SG CYS 100 1_555 A CYS 100 A SG CYS 100 3_555 covale 1.349 both A SER 128 A C SER 128 1_555 A MSE 129 A N MSE 129 1_555 covale 1.354 both B SER 128 B C SER 128 1_555 B MSE 129 B N MSE 129 1_555 TRANSCRIPTION Structural Genomics Consortium, SGC, domain swapping, TRANSCRIPTION RPR1B_HUMAN UNP 1 2 Q9NQG5 SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNSKRKGPEFTREF ESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLKLSMEDSKSP 2 135 4FU3 2 135 Q9NQG5 A 1 2 135 2 135 4FU3 2 135 Q9NQG5 B 1 2 135 1 expression tag GLY 1 4FU3 A Q9NQG5 UNP 1 2 expression tag GLY 1 4FU3 B Q9NQG5 UNP 1 BINDING SITE FOR RESIDUE CL A 201 A CL 201 Software 2 BINDING SITE FOR RESIDUE CL A 202 A CL 202 Software 1 BINDING SITE FOR RESIDUE CL B 201 B CL 201 Software 4 A ARG 114 A ARG 114 2 1_555 B HOH 310 Q HOH 2 3_555 A GLU 6 A GLU 6 1 1_555 A ILE 31 A ILE 31 4 3_555 A HOH 317 P HOH 4 3_555 A HOH 318 P HOH 4 3_555 B ARG 114 B ARG 114 4 1_555 20 C 2 2 21