0.014631
0.000000
0.000000
0.000000
0.013134
0.000000
0.000000
0.000000
0.012227
0.00000
0.00000
0.00000
Ihara, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
68.349
76.139
81.787
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H15 N5 O11 P2
443.201
n
GUANOSINE-5'-DIPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
P
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
C
N
99
R
C
N
100
N
O
N
101
S
C
N
102
N
O
N
103
R
C
N
104
N
O
N
105
R
C
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
C
N
111
N
O
N
112
N
N
N
113
N
C
N
114
N
N
N
115
N
N
Y
116
N
C
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
N
N
133
S
C
N
134
N
C
N
135
N
O
N
136
N
C
N
137
N
C
N
138
N
C
N
139
N
O
N
140
N
N
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
S
C
N
154
N
C
N
155
N
O
N
156
N
C
N
157
N
C
N
158
N
C
N
159
N
O
N
160
N
O
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
N
N
182
S
C
N
183
N
C
N
184
N
O
N
185
N
C
Y
186
N
C
Y
187
N
N
Y
188
N
C
Y
189
N
C
Y
190
N
N
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
S
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
N
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
S
N
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
N
322
N
C
N
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
N
339
N
O
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
R
C
N
353
N
O
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
N
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
Y
112
N
sing
Y
113
N
sing
Y
114
N
doub
N
115
N
sing
Y
116
N
sing
N
117
N
sing
Y
118
N
doub
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
Y
185
N
sing
Y
186
N
doub
Y
187
N
doub
N
188
N
sing
Y
189
N
sing
N
190
N
sing
Y
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
doub
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
Y
293
N
doub
Y
294
N
sing
Y
295
N
sing
N
296
N
sing
Y
297
N
doub
N
298
N
sing
Y
299
N
doub
N
300
N
sing
Y
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
doub
N
374
N
sing
Y
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
Y
390
N
doub
Y
391
N
sing
Y
392
N
sing
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
69
345
351
10.1107/S0907444912047294
23519409
Direct metal recognition by guanine nucleotide-exchange factor in the initial step of the exchange reaction
2013
10.2210/pdb4g01/pdb
pdb_00004g01
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-11-18
ADSC QUANTUM 210
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
AR-NW12A
Photon Factory
1.0000
SYNCHROTRON
PHOTON FACTORY BEAMLINE AR-NW12A
30168.316
Vacuolar protein sorting-associated protein 9A
VPS9 domain, UNP residues 1-265
1
man
polymer
19887.432
Ras-related protein RABF2b
small GTPase, UNP residues 1-179
1
man
polymer
40.078
CALCIUM ION
1
syn
non-polymer
443.201
GUANOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
261
nat
water
VPS9a, AtVSP9a
ARA7, AtRABF2b, Ras-related protein Ara-7, Ras-related protein Rab5B, AtRab5B
no
no
GSMENTDVFLGLHDFLERMRKPSAGDFVKSIKSFIVSFSNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWSGCSEEELDSA
GDGLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLVQQFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVC
ILNCCKVINNLLLNASIASNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFIS
NIDAKSISLDEAEFEKNMESARARISG
GSMENTDVFLGLHDFLERMRKPSAGDFVKSIKSFIVSFSNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWSGCSEEELDSA
GDGLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLVQQFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVC
ILNCCKVINNLLLNASIASNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFIS
NIDAKSISLDEAEFEKNMESARARISG
A
polypeptide(L)
no
no
GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM
YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTAT
NVKEIFYEIARRLPRVQPTEN
GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM
YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTAT
NVKEIFYEIARRLPRVQPTEN
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse-ear cress
sample
VPS9A
3702
Arabidopsis thaliana
562
Escherichia coli
mouse-ear cress
sample
ARA-7
3702
Arabidopsis thaliana
562
Escherichia coli
1
2.13
42.14
VAPOR DIFFUSION, SITTING DROP
6.5
20% PEG3350, 200mM calcium acetate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-02-27
1
1
2013-08-07
1
2
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
ARA7-GDP/VPS9a
ARA7/VPS9a
ARA7-GDPNH2/VPS9a
ARA7-GDP/VPS9a(D185N)
RCSB
Y
PDBJ
2012-07-09
REL
REL
CA
CALCIUM ION
GDP
GUANOSINE-5'-DIPHOSPHATE
HOH
water
2EFC
PDB ENTRY 2efc
PDB
experimental model
CA
300
3
CA
CA
300
A
GDP
200
4
GDP
GDP
200
B
HOH
1
5
HOH
HOH
401
A
HOH
2
5
HOH
HOH
402
A
HOH
3
5
HOH
HOH
403
A
HOH
4
5
HOH
HOH
404
A
HOH
5
5
HOH
HOH
405
A
HOH
6
5
HOH
HOH
406
A
HOH
7
5
HOH
HOH
407
A
HOH
8
5
HOH
HOH
408
A
HOH
9
5
HOH
HOH
409
A
HOH
11
5
HOH
HOH
410
A
HOH
12
5
HOH
HOH
411
A
HOH
13
5
HOH
HOH
412
A
HOH
14
5
HOH
HOH
413
A
HOH
15
5
HOH
HOH
414
A
HOH
18
5
HOH
HOH
415
A
HOH
22
5
HOH
HOH
416
A
HOH
23
5
HOH
HOH
417
A
HOH
24
5
HOH
HOH
418
A
HOH
28
5
HOH
HOH
419
A
HOH
29
5
HOH
HOH
420
A
HOH
30
5
HOH
HOH
421
A
HOH
32
5
HOH
HOH
422
A
HOH
33
5
HOH
HOH
423
A
HOH
34
5
HOH
HOH
424
A
HOH
37
5
HOH
HOH
425
A
HOH
38
5
HOH
HOH
426
A
HOH
39
5
HOH
HOH
427
A
HOH
41
5
HOH
HOH
428
A
HOH
44
5
HOH
HOH
429
A
HOH
46
5
HOH
HOH
430
A
HOH
47
5
HOH
HOH
431
A
HOH
49
5
HOH
HOH
432
A
HOH
50
5
HOH
HOH
433
A
HOH
51
5
HOH
HOH
434
A
HOH
52
5
HOH
HOH
435
A
HOH
53
5
HOH
HOH
436
A
HOH
54
5
HOH
HOH
437
A
HOH
55
5
HOH
HOH
438
A
HOH
57
5
HOH
HOH
439
A
HOH
58
5
HOH
HOH
440
A
HOH
59
5
HOH
HOH
441
A
HOH
61
5
HOH
HOH
442
A
HOH
62
5
HOH
HOH
443
A
HOH
65
5
HOH
HOH
444
A
HOH
68
5
HOH
HOH
445
A
HOH
69
5
HOH
HOH
446
A
HOH
70
5
HOH
HOH
447
A
HOH
72
5
HOH
HOH
448
A
HOH
73
5
HOH
HOH
449
A
HOH
74
5
HOH
HOH
450
A
HOH
76
5
HOH
HOH
451
A
HOH
79
5
HOH
HOH
452
A
HOH
80
5
HOH
HOH
453
A
HOH
81
5
HOH
HOH
454
A
HOH
82
5
HOH
HOH
455
A
HOH
84
5
HOH
HOH
456
A
HOH
86
5
HOH
HOH
457
A
HOH
88
5
HOH
HOH
458
A
HOH
89
5
HOH
HOH
459
A
HOH
90
5
HOH
HOH
460
A
HOH
91
5
HOH
HOH
461
A
HOH
93
5
HOH
HOH
462
A
HOH
94
5
HOH
HOH
463
A
HOH
96
5
HOH
HOH
464
A
HOH
97
5
HOH
HOH
465
A
HOH
98
5
HOH
HOH
466
A
HOH
100
5
HOH
HOH
467
A
HOH
101
5
HOH
HOH
468
A
HOH
102
5
HOH
HOH
469
A
HOH
104
5
HOH
HOH
470
A
HOH
105
5
HOH
HOH
471
A
HOH
106
5
HOH
HOH
472
A
HOH
107
5
HOH
HOH
473
A
HOH
110
5
HOH
HOH
474
A
HOH
111
5
HOH
HOH
475
A
HOH
112
5
HOH
HOH
476
A
HOH
114
5
HOH
HOH
477
A
HOH
115
5
HOH
HOH
478
A
HOH
116
5
HOH
HOH
479
A
HOH
117
5
HOH
HOH
480
A
HOH
118
5
HOH
HOH
481
A
HOH
119
5
HOH
HOH
482
A
HOH
121
5
HOH
HOH
483
A
HOH
122
5
HOH
HOH
484
A
HOH
123
5
HOH
HOH
485
A
HOH
124
5
HOH
HOH
486
A
HOH
125
5
HOH
HOH
487
A
HOH
126
5
HOH
HOH
488
A
HOH
128
5
HOH
HOH
489
A
HOH
129
5
HOH
HOH
490
A
HOH
132
5
HOH
HOH
491
A
HOH
134
5
HOH
HOH
492
A
HOH
135
5
HOH
HOH
493
A
HOH
137
5
HOH
HOH
494
A
HOH
138
5
HOH
HOH
495
A
HOH
139
5
HOH
HOH
496
A
HOH
140
5
HOH
HOH
497
A
HOH
141
5
HOH
HOH
498
A
HOH
142
5
HOH
HOH
499
A
HOH
143
5
HOH
HOH
500
A
HOH
144
5
HOH
HOH
501
A
HOH
145
5
HOH
HOH
502
A
HOH
146
5
HOH
HOH
503
A
HOH
147
5
HOH
HOH
504
A
HOH
149
5
HOH
HOH
505
A
HOH
150
5
HOH
HOH
506
A
HOH
153
5
HOH
HOH
507
A
HOH
155
5
HOH
HOH
508
A
HOH
156
5
HOH
HOH
509
A
HOH
159
5
HOH
HOH
510
A
HOH
160
5
HOH
HOH
511
A
HOH
162
5
HOH
HOH
512
A
HOH
163
5
HOH
HOH
513
A
HOH
164
5
HOH
HOH
514
A
HOH
165
5
HOH
HOH
515
A
HOH
166
5
HOH
HOH
516
A
HOH
167
5
HOH
HOH
517
A
HOH
168
5
HOH
HOH
518
A
HOH
169
5
HOH
HOH
519
A
HOH
170
5
HOH
HOH
520
A
HOH
171
5
HOH
HOH
521
A
HOH
172
5
HOH
HOH
522
A
HOH
173
5
HOH
HOH
523
A
HOH
174
5
HOH
HOH
524
A
HOH
175
5
HOH
HOH
525
A
HOH
176
5
HOH
HOH
526
A
HOH
178
5
HOH
HOH
527
A
HOH
179
5
HOH
HOH
528
A
HOH
180
5
HOH
HOH
529
A
HOH
181
5
HOH
HOH
530
A
HOH
182
5
HOH
HOH
531
A
HOH
184
5
HOH
HOH
532
A
HOH
185
5
HOH
HOH
533
A
HOH
187
5
HOH
HOH
534
A
HOH
188
5
HOH
HOH
535
A
HOH
189
5
HOH
HOH
536
A
HOH
190
5
HOH
HOH
537
A
HOH
191
5
HOH
HOH
538
A
HOH
193
5
HOH
HOH
539
A
HOH
195
5
HOH
HOH
540
A
HOH
196
5
HOH
HOH
541
A
HOH
197
5
HOH
HOH
542
A
HOH
201
5
HOH
HOH
543
A
HOH
203
5
HOH
HOH
544
A
HOH
204
5
HOH
HOH
545
A
HOH
205
5
HOH
HOH
546
A
HOH
206
5
HOH
HOH
547
A
HOH
207
5
HOH
HOH
548
A
HOH
208
5
HOH
HOH
549
A
HOH
211
5
HOH
HOH
550
A
HOH
212
5
HOH
HOH
551
A
HOH
213
5
HOH
HOH
552
A
HOH
214
5
HOH
HOH
553
A
HOH
215
5
HOH
HOH
554
A
HOH
217
5
HOH
HOH
555
A
HOH
219
5
HOH
HOH
556
A
HOH
220
5
HOH
HOH
557
A
HOH
221
5
HOH
HOH
558
A
HOH
223
5
HOH
HOH
559
A
HOH
224
5
HOH
HOH
560
A
HOH
226
5
HOH
HOH
561
A
HOH
228
5
HOH
HOH
562
A
HOH
230
5
HOH
HOH
563
A
HOH
231
5
HOH
HOH
564
A
HOH
232
5
HOH
HOH
565
A
HOH
234
5
HOH
HOH
566
A
HOH
236
5
HOH
HOH
567
A
HOH
237
5
HOH
HOH
568
A
HOH
242
5
HOH
HOH
569
A
HOH
243
5
HOH
HOH
570
A
HOH
244
5
HOH
HOH
571
A
HOH
246
5
HOH
HOH
572
A
HOH
247
5
HOH
HOH
573
A
HOH
248
5
HOH
HOH
574
A
HOH
249
5
HOH
HOH
575
A
HOH
250
5
HOH
HOH
576
A
HOH
251
5
HOH
HOH
577
A
HOH
252
5
HOH
HOH
578
A
HOH
253
5
HOH
HOH
579
A
HOH
254
5
HOH
HOH
580
A
HOH
255
5
HOH
HOH
581
A
HOH
256
5
HOH
HOH
582
A
HOH
257
5
HOH
HOH
583
A
HOH
258
5
HOH
HOH
584
A
HOH
259
5
HOH
HOH
585
A
HOH
261
5
HOH
HOH
586
A
HOH
10
5
HOH
HOH
301
B
HOH
16
5
HOH
HOH
302
B
HOH
17
5
HOH
HOH
303
B
HOH
19
5
HOH
HOH
304
B
HOH
20
5
HOH
HOH
305
B
HOH
21
5
HOH
HOH
306
B
HOH
25
5
HOH
HOH
307
B
HOH
26
5
HOH
HOH
308
B
HOH
27
5
HOH
HOH
309
B
HOH
31
5
HOH
HOH
310
B
HOH
35
5
HOH
HOH
311
B
HOH
36
5
HOH
HOH
312
B
HOH
40
5
HOH
HOH
313
B
HOH
42
5
HOH
HOH
314
B
HOH
43
5
HOH
HOH
315
B
HOH
45
5
HOH
HOH
316
B
HOH
48
5
HOH
HOH
317
B
HOH
56
5
HOH
HOH
318
B
HOH
60
5
HOH
HOH
319
B
HOH
63
5
HOH
HOH
320
B
HOH
64
5
HOH
HOH
321
B
HOH
66
5
HOH
HOH
322
B
HOH
67
5
HOH
HOH
323
B
HOH
71
5
HOH
HOH
324
B
HOH
75
5
HOH
HOH
325
B
HOH
77
5
HOH
HOH
326
B
HOH
78
5
HOH
HOH
327
B
HOH
83
5
HOH
HOH
328
B
HOH
85
5
HOH
HOH
329
B
HOH
87
5
HOH
HOH
330
B
HOH
92
5
HOH
HOH
331
B
HOH
95
5
HOH
HOH
332
B
HOH
99
5
HOH
HOH
333
B
HOH
103
5
HOH
HOH
334
B
HOH
108
5
HOH
HOH
335
B
HOH
109
5
HOH
HOH
336
B
HOH
113
5
HOH
HOH
337
B
HOH
120
5
HOH
HOH
338
B
HOH
127
5
HOH
HOH
339
B
HOH
130
5
HOH
HOH
340
B
HOH
131
5
HOH
HOH
341
B
HOH
133
5
HOH
HOH
342
B
HOH
136
5
HOH
HOH
343
B
HOH
148
5
HOH
HOH
344
B
HOH
151
5
HOH
HOH
345
B
HOH
152
5
HOH
HOH
346
B
HOH
154
5
HOH
HOH
347
B
HOH
157
5
HOH
HOH
348
B
HOH
158
5
HOH
HOH
349
B
HOH
161
5
HOH
HOH
350
B
HOH
177
5
HOH
HOH
351
B
HOH
183
5
HOH
HOH
352
B
HOH
186
5
HOH
HOH
353
B
HOH
192
5
HOH
HOH
354
B
HOH
194
5
HOH
HOH
355
B
HOH
198
5
HOH
HOH
356
B
HOH
199
5
HOH
HOH
357
B
HOH
200
5
HOH
HOH
358
B
HOH
202
5
HOH
HOH
359
B
HOH
209
5
HOH
HOH
360
B
HOH
210
5
HOH
HOH
361
B
HOH
216
5
HOH
HOH
362
B
HOH
218
5
HOH
HOH
363
B
HOH
222
5
HOH
HOH
364
B
HOH
225
5
HOH
HOH
365
B
HOH
227
5
HOH
HOH
366
B
HOH
229
5
HOH
HOH
367
B
HOH
233
5
HOH
HOH
368
B
HOH
235
5
HOH
HOH
369
B
HOH
238
5
HOH
HOH
370
B
HOH
239
5
HOH
HOH
371
B
HOH
240
5
HOH
HOH
372
B
HOH
241
5
HOH
HOH
373
B
HOH
245
5
HOH
HOH
374
B
HOH
260
5
HOH
HOH
375
B
n
1
-1
A
n
2
0
A
n
3
1
A
n
4
2
A
n
5
3
A
n
6
4
A
n
7
5
A
n
8
6
A
n
9
7
A
n
10
8
A
n
11
9
A
n
12
10
A
n
13
11
A
n
14
12
A
n
15
13
A
n
16
14
A
n
17
15
A
n
18
16
A
n
19
17
A
n
20
18
A
n
21
19
A
n
22
20
A
n
23
21
A
n
24
22
A
n
25
23
A
n
26
24
A
n
27
25
A
VAL
26
n
28
VAL
26
A
LYS
27
n
29
LYS
27
A
SER
28
n
30
SER
28
A
ILE
29
n
31
ILE
29
A
LYS
30
n
32
LYS
30
A
SER
31
n
33
SER
31
A
PHE
32
n
34
PHE
32
A
ILE
33
n
35
ILE
33
A
VAL
34
n
36
VAL
34
A
SER
35
n
37
SER
35
A
PHE
36
n
38
PHE
36
A
SER
37
n
39
SER
37
A
ASN
38
n
40
ASN
38
A
ASN
39
n
41
ASN
39
A
ALA
40
n
42
ALA
40
A
PRO
41
n
43
PRO
41
A
ASP
42
n
44
ASP
42
A
PRO
43
n
45
PRO
43
A
GLU
44
n
46
GLU
44
A
LYS
45
n
47
LYS
45
A
ASP
46
n
48
ASP
46
A
CYS
47
n
49
CYS
47
A
ALA
48
n
50
ALA
48
A
MET
49
n
51
MET
49
A
VAL
50
n
52
VAL
50
A
GLN
51
n
53
GLN
51
A
GLU
52
n
54
GLU
52
A
PHE
53
n
55
PHE
53
A
PHE
54
n
56
PHE
54
A
SER
55
n
57
SER
55
A
LYS
56
n
58
LYS
56
A
MET
57
n
59
MET
57
A
GLU
58
n
60
GLU
58
A
ALA
59
n
61
ALA
59
A
ALA
60
n
62
ALA
60
A
PHE
61
n
63
PHE
61
A
ARG
62
n
64
ARG
62
A
ALA
63
n
65
ALA
63
A
HIS
64
n
66
HIS
64
A
PRO
65
n
67
PRO
65
A
LEU
66
n
68
LEU
66
A
TRP
67
n
69
TRP
67
A
SER
68
n
70
SER
68
A
GLY
69
n
71
GLY
69
A
CYS
70
n
72
CYS
70
A
SER
71
n
73
SER
71
A
GLU
72
n
74
GLU
72
A
GLU
73
n
75
GLU
73
A
GLU
74
n
76
GLU
74
A
LEU
75
n
77
LEU
75
A
ASP
76
n
78
ASP
76
A
SER
77
n
79
SER
77
A
ALA
78
n
80
ALA
78
A
GLY
79
n
81
GLY
79
A
ASP
80
n
82
ASP
80
A
GLY
81
n
83
GLY
81
A
LEU
82
n
84
LEU
82
A
GLU
83
n
85
GLU
83
A
LYS
84
n
86
LYS
84
A
TYR
85
n
87
TYR
85
A
VAL
86
n
88
VAL
86
A
MET
87
n
89
MET
87
A
THR
88
n
90
THR
88
A
LYS
89
n
91
LYS
89
A
LEU
90
n
92
LEU
90
A
PHE
91
n
93
PHE
91
A
THR
92
n
94
THR
92
A
ARG
93
n
95
ARG
93
A
VAL
94
n
96
VAL
94
A
PHE
95
n
97
PHE
95
A
ALA
96
n
98
ALA
96
A
SER
97
n
99
SER
97
A
ASN
98
n
100
ASN
98
A
THR
99
n
101
THR
99
A
GLU
100
n
102
GLU
100
A
GLU
101
n
103
GLU
101
A
VAL
102
n
104
VAL
102
A
ILE
103
n
105
ILE
103
A
ALA
104
n
106
ALA
104
A
ASP
105
n
107
ASP
105
A
GLU
106
n
108
GLU
106
A
LYS
107
n
109
LYS
107
A
LEU
108
n
110
LEU
108
A
PHE
109
n
111
PHE
109
A
GLN
110
n
112
GLN
110
A
LYS
111
n
113
LYS
111
A
MET
112
n
114
MET
112
A
SER
113
n
115
SER
113
A
LEU
114
n
116
LEU
114
A
VAL
115
n
117
VAL
115
A
GLN
116
n
118
GLN
116
A
GLN
117
n
119
GLN
117
A
PHE
118
n
120
PHE
118
A
ILE
119
n
121
ILE
119
A
SER
120
n
122
SER
120
A
PRO
121
n
123
PRO
121
A
GLU
122
n
124
GLU
122
A
ASN
123
n
125
ASN
123
A
LEU
124
n
126
LEU
124
A
ASP
125
n
127
ASP
125
A
ILE
126
n
128
ILE
126
A
GLN
127
n
129
GLN
127
A
PRO
128
n
130
PRO
128
A
THR
129
n
131
THR
129
A
PHE
130
n
132
PHE
130
A
GLN
131
n
133
GLN
131
A
ASN
132
n
134
ASN
132
A
GLU
133
n
135
GLU
133
A
SER
134
n
136
SER
134
A
SER
135
n
137
SER
135
A
TRP
136
n
138
TRP
136
A
LEU
137
n
139
LEU
137
A
LEU
138
n
140
LEU
138
A
ALA
139
n
141
ALA
139
A
GLN
140
n
142
GLN
140
A
LYS
141
n
143
LYS
141
A
GLU
142
n
144
GLU
142
A
LEU
143
n
145
LEU
143
A
GLN
144
n
146
GLN
144
A
LYS
145
n
147
LYS
145
A
ILE
146
n
148
ILE
146
A
ASN
147
n
149
ASN
147
A
MET
148
n
150
MET
148
A
TYR
149
n
151
TYR
149
A
LYS
150
n
152
LYS
150
A
ALA
151
n
153
ALA
151
A
PRO
152
n
154
PRO
152
A
ARG
153
n
155
ARG
153
A
ASP
154
n
156
ASP
154
A
LYS
155
n
157
LYS
155
A
LEU
156
n
158
LEU
156
A
VAL
157
n
159
VAL
157
A
CYS
158
n
160
CYS
158
A
ILE
159
n
161
ILE
159
A
LEU
160
n
162
LEU
160
A
ASN
161
n
163
ASN
161
A
CYS
162
n
164
CYS
162
A
CYS
163
n
165
CYS
163
A
LYS
164
n
166
LYS
164
A
VAL
165
n
167
VAL
165
A
ILE
166
n
168
ILE
166
A
ASN
167
n
169
ASN
167
A
ASN
168
n
170
ASN
168
A
LEU
169
n
171
LEU
169
A
LEU
170
n
172
LEU
170
A
LEU
171
n
173
LEU
171
A
ASN
172
n
174
ASN
172
A
ALA
173
n
175
ALA
173
A
SER
174
n
176
SER
174
A
ILE
175
n
177
ILE
175
A
ALA
176
n
178
ALA
176
A
SER
177
n
179
SER
177
A
ASN
178
n
180
ASN
178
A
GLU
179
n
181
GLU
179
A
ASN
180
n
182
ASN
180
A
ALA
181
n
183
ALA
181
A
PRO
182
n
184
PRO
182
A
GLY
183
n
185
GLY
183
A
ALA
184
n
186
ALA
184
A
ASP
185
n
187
ASP
185
A
GLU
186
n
188
GLU
186
A
PHE
187
n
189
PHE
187
A
LEU
188
n
190
LEU
188
A
PRO
189
n
191
PRO
189
A
VAL
190
n
192
VAL
190
A
LEU
191
n
193
LEU
191
A
ILE
192
n
194
ILE
192
A
TYR
193
n
195
TYR
193
A
VAL
194
n
196
VAL
194
A
THR
195
n
197
THR
195
A
ILE
196
n
198
ILE
196
A
LYS
197
n
199
LYS
197
A
ALA
198
n
200
ALA
198
A
ASN
199
n
201
ASN
199
A
PRO
200
n
202
PRO
200
A
PRO
201
n
203
PRO
201
A
GLN
202
n
204
GLN
202
A
LEU
203
n
205
LEU
203
A
HIS
204
n
206
HIS
204
A
SER
205
n
207
SER
205
A
ASN
206
n
208
ASN
206
A
LEU
207
n
209
LEU
207
A
LEU
208
n
210
LEU
208
A
TYR
209
n
211
TYR
209
A
ILE
210
n
212
ILE
210
A
GLN
211
n
213
GLN
211
A
ARG
212
n
214
ARG
212
A
TYR
213
n
215
TYR
213
A
ARG
214
n
216
ARG
214
A
ARG
215
n
217
ARG
215
A
GLU
216
n
218
GLU
216
A
SER
217
n
219
SER
217
A
LYS
218
n
220
LYS
218
A
LEU
219
n
221
LEU
219
A
VAL
220
n
222
VAL
220
A
GLY
221
n
223
GLY
221
A
GLU
222
n
224
GLU
222
A
ALA
223
n
225
ALA
223
A
ALA
224
n
226
ALA
224
A
TYR
225
n
227
TYR
225
A
PHE
226
n
228
PHE
226
A
PHE
227
n
229
PHE
227
A
THR
228
n
230
THR
228
A
ASN
229
n
231
ASN
229
A
ILE
230
n
232
ILE
230
A
LEU
231
n
233
LEU
231
A
SER
232
n
234
SER
232
A
ALA
233
n
235
ALA
233
A
GLU
234
n
236
GLU
234
A
SER
235
n
237
SER
235
A
PHE
236
n
238
PHE
236
A
ILE
237
n
239
ILE
237
A
SER
238
n
240
SER
238
A
ASN
239
n
241
ASN
239
A
ILE
240
n
242
ILE
240
A
ASP
241
n
243
ASP
241
A
ALA
242
n
244
ALA
242
A
LYS
243
n
245
LYS
243
A
SER
244
n
246
SER
244
A
ILE
245
n
247
ILE
245
A
SER
246
n
248
SER
246
A
LEU
247
n
249
LEU
247
A
ASP
248
n
250
ASP
248
A
GLU
249
n
251
GLU
249
A
ALA
250
n
252
ALA
250
A
GLU
251
n
253
GLU
251
A
PHE
252
n
254
PHE
252
A
GLU
253
n
255
GLU
253
A
LYS
254
n
256
LYS
254
A
ASN
255
n
257
ASN
255
A
MET
256
n
258
MET
256
A
GLU
257
n
259
GLU
257
A
SER
258
n
260
SER
258
A
ALA
259
n
261
ALA
259
A
ARG
260
n
262
ARG
260
A
ALA
261
n
263
ALA
261
A
ARG
262
n
264
ARG
262
A
n
265
263
A
n
266
264
A
n
267
265
A
n
1
-1
B
n
2
0
B
n
3
1
B
n
4
2
B
n
5
3
B
n
6
4
B
n
7
5
B
n
8
6
B
n
9
7
B
SER
8
n
10
SER
8
B
ILE
9
n
11
ILE
9
B
ASN
10
n
12
ASN
10
B
ALA
11
n
13
ALA
11
B
LYS
12
n
14
LYS
12
B
LEU
13
n
15
LEU
13
B
VAL
14
n
16
VAL
14
B
LEU
15
n
17
LEU
15
B
LEU
16
n
18
LEU
16
B
GLY
17
n
19
GLY
17
B
ASP
18
n
20
ASP
18
B
VAL
19
n
21
VAL
19
B
GLY
20
n
22
GLY
20
B
ALA
21
n
23
ALA
21
B
GLY
22
n
24
GLY
22
B
LYS
23
n
25
LYS
23
B
SER
24
n
26
SER
24
B
SER
25
n
27
SER
25
B
LEU
26
n
28
LEU
26
B
VAL
27
n
29
VAL
27
B
LEU
28
n
30
LEU
28
B
ARG
29
n
31
ARG
29
B
PHE
30
n
32
PHE
30
B
VAL
31
n
33
VAL
31
B
LYS
32
n
34
LYS
32
B
ASP
33
n
35
ASP
33
B
GLN
34
n
36
GLN
34
B
PHE
35
n
37
PHE
35
B
VAL
36
n
38
VAL
36
B
GLU
37
n
39
GLU
37
B
PHE
38
n
40
PHE
38
B
GLN
39
n
41
GLN
39
B
GLU
40
n
42
GLU
40
B
SER
41
n
43
SER
41
B
THR
42
n
44
THR
42
B
ILE
43
n
45
ILE
43
B
GLY
44
n
46
GLY
44
B
ALA
45
n
47
ALA
45
B
ALA
46
n
48
ALA
46
B
PHE
47
n
49
PHE
47
B
PHE
48
n
50
PHE
48
B
SER
49
n
51
SER
49
B
GLN
50
n
52
GLN
50
B
THR
51
n
53
THR
51
B
LEU
52
n
54
LEU
52
B
ALA
53
n
55
ALA
53
B
VAL
54
n
56
VAL
54
B
ASN
55
n
57
ASN
55
B
ASP
56
n
58
ASP
56
B
ALA
57
n
59
ALA
57
B
THR
58
n
60
THR
58
B
VAL
59
n
61
VAL
59
B
LYS
60
n
62
LYS
60
B
PHE
61
n
63
PHE
61
B
GLU
62
n
64
GLU
62
B
ILE
63
n
65
ILE
63
B
TRP
64
n
66
TRP
64
B
ASP
65
n
67
ASP
65
B
THR
66
n
68
THR
66
B
ALA
67
n
69
ALA
67
B
GLY
68
n
70
GLY
68
B
GLN
69
n
71
GLN
69
B
GLU
70
n
72
GLU
70
B
ARG
71
n
73
ARG
71
B
TYR
72
n
74
TYR
72
B
HIS
73
n
75
HIS
73
B
SER
74
n
76
SER
74
B
LEU
75
n
77
LEU
75
B
ALA
76
n
78
ALA
76
B
PRO
77
n
79
PRO
77
B
MET
78
n
80
MET
78
B
TYR
79
n
81
TYR
79
B
TYR
80
n
82
TYR
80
B
ARG
81
n
83
ARG
81
B
GLY
82
n
84
GLY
82
B
ALA
83
n
85
ALA
83
B
ALA
84
n
86
ALA
84
B
ALA
85
n
87
ALA
85
B
ALA
86
n
88
ALA
86
B
ILE
87
n
89
ILE
87
B
ILE
88
n
90
ILE
88
B
VAL
89
n
91
VAL
89
B
PHE
90
n
92
PHE
90
B
ASP
91
n
93
ASP
91
B
VAL
92
n
94
VAL
92
B
THR
93
n
95
THR
93
B
ASN
94
n
96
ASN
94
B
GLN
95
n
97
GLN
95
B
ALA
96
n
98
ALA
96
B
SER
97
n
99
SER
97
B
PHE
98
n
100
PHE
98
B
GLU
99
n
101
GLU
99
B
ARG
100
n
102
ARG
100
B
ALA
101
n
103
ALA
101
B
LYS
102
n
104
LYS
102
B
LYS
103
n
105
LYS
103
B
TRP
104
n
106
TRP
104
B
VAL
105
n
107
VAL
105
B
GLN
106
n
108
GLN
106
B
GLU
107
n
109
GLU
107
B
LEU
108
n
110
LEU
108
B
GLN
109
n
111
GLN
109
B
ALA
110
n
112
ALA
110
B
GLN
111
n
113
GLN
111
B
GLY
112
n
114
GLY
112
B
ASN
113
n
115
ASN
113
B
PRO
114
n
116
PRO
114
B
ASN
115
n
117
ASN
115
B
MET
116
n
118
MET
116
B
VAL
117
n
119
VAL
117
B
MET
118
n
120
MET
118
B
ALA
119
n
121
ALA
119
B
LEU
120
n
122
LEU
120
B
ALA
121
n
123
ALA
121
B
GLY
122
n
124
GLY
122
B
ASN
123
n
125
ASN
123
B
LYS
124
n
126
LYS
124
B
SER
125
n
127
SER
125
B
ASP
126
n
128
ASP
126
B
LEU
127
n
129
LEU
127
B
LEU
128
n
130
LEU
128
B
ASP
129
n
131
ASP
129
B
ALA
130
n
132
ALA
130
B
ARG
131
n
133
ARG
131
B
LYS
132
n
134
LYS
132
B
VAL
133
n
135
VAL
133
B
THR
134
n
136
THR
134
B
ALA
135
n
137
ALA
135
B
GLU
136
n
138
GLU
136
B
ASP
137
n
139
ASP
137
B
ALA
138
n
140
ALA
138
B
GLN
139
n
141
GLN
139
B
THR
140
n
142
THR
140
B
TYR
141
n
143
TYR
141
B
ALA
142
n
144
ALA
142
B
GLN
143
n
145
GLN
143
B
GLU
144
n
146
GLU
144
B
ASN
145
n
147
ASN
145
B
GLY
146
n
148
GLY
146
B
LEU
147
n
149
LEU
147
B
PHE
148
n
150
PHE
148
B
PHE
149
n
151
PHE
149
B
MET
150
n
152
MET
150
B
GLU
151
n
153
GLU
151
B
THR
152
n
154
THR
152
B
SER
153
n
155
SER
153
B
ALA
154
n
156
ALA
154
B
LYS
155
n
157
LYS
155
B
THR
156
n
158
THR
156
B
ALA
157
n
159
ALA
157
B
THR
158
n
160
THR
158
B
ASN
159
n
161
ASN
159
B
VAL
160
n
162
VAL
160
B
LYS
161
n
163
LYS
161
B
GLU
162
n
164
GLU
162
B
ILE
163
n
165
ILE
163
B
PHE
164
n
166
PHE
164
B
TYR
165
n
167
TYR
165
B
GLU
166
n
168
GLU
166
B
ILE
167
n
169
ILE
167
B
ALA
168
n
170
ALA
168
B
ARG
169
n
171
ARG
169
B
ARG
170
n
172
ARG
170
B
LEU
171
n
173
LEU
171
B
PRO
172
n
174
PRO
172
B
n
175
173
B
n
176
174
B
n
177
175
B
n
178
176
B
n
179
177
B
n
180
178
B
n
181
179
B
author_and_software_defined_assembly
PISA
2
dimeric
2900
-32
19110
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
A
ASP
185
A
OD2
ASP
187
1_555
88.1
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
404
E
O
HOH
1_555
78.2
A
ASP
185
A
OD2
ASP
187
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
404
E
O
HOH
1_555
135.5
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
410
E
O
HOH
1_555
100.7
A
ASP
185
A
OD2
ASP
187
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
410
E
O
HOH
1_555
66.1
A
HOH
404
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
410
E
O
HOH
1_555
157.8
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
485
E
O
HOH
1_555
91.2
A
ASP
185
A
OD2
ASP
187
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
485
E
O
HOH
1_555
61.8
A
HOH
404
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
485
E
O
HOH
1_555
76.3
A
HOH
410
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
485
E
O
HOH
1_555
125.9
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
B
SER
24
B
OG
SER
26
1_555
81.8
A
ASP
185
A
OD2
ASP
187
1_555
A
CA
300
C
CA
CA
1_555
B
SER
24
B
OG
SER
26
1_555
139.4
A
HOH
404
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
B
SER
24
B
OG
SER
26
1_555
80.5
A
HOH
410
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
B
SER
24
B
OG
SER
26
1_555
77.4
A
HOH
485
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
B
SER
24
B
OG
SER
26
1_555
156.7
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
164.6
A
ASP
185
A
OD2
ASP
187
1_555
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
105.8
A
HOH
404
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
87.2
A
HOH
410
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
91.1
A
HOH
485
E
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
89.8
B
SER
24
B
OG
SER
26
1_555
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
91.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
B
N
THR
42
B
N
THR
44
B
O
SER
49
B
O
SER
51
B
N
LEU
52
B
N
LEU
54
B
O
VAL
59
B
O
VAL
61
B
O
LYS
60
B
O
LYS
62
B
N
ILE
9
B
N
ILE
11
B
N
LEU
16
B
N
LEU
18
B
O
VAL
89
B
O
VAL
91
B
N
ILE
88
B
N
ILE
90
B
O
ALA
119
B
O
ALA
121
B
N
LEU
120
B
N
LEU
122
B
O
PHE
148
B
O
PHE
150
1
A
GLY
-1
A
GLY
1
1
Y
1
A
SER
0
A
SER
2
1
Y
1
A
MET
1
A
MET
3
1
Y
1
A
GLU
2
A
GLU
4
1
Y
1
A
ASN
3
A
ASN
5
1
Y
1
A
THR
4
A
THR
6
1
Y
1
A
ASP
5
A
ASP
7
1
Y
1
A
VAL
6
A
VAL
8
1
Y
1
A
PHE
7
A
PHE
9
1
Y
1
A
LEU
8
A
LEU
10
1
Y
1
A
GLY
9
A
GLY
11
1
Y
1
A
LEU
10
A
LEU
12
1
Y
1
A
HIS
11
A
HIS
13
1
Y
1
A
ASP
12
A
ASP
14
1
Y
1
A
PHE
13
A
PHE
15
1
Y
1
A
LEU
14
A
LEU
16
1
Y
1
A
GLU
15
A
GLU
17
1
Y
1
A
ARG
16
A
ARG
18
1
Y
1
A
MET
17
A
MET
19
1
Y
1
A
ARG
18
A
ARG
20
1
Y
1
A
LYS
19
A
LYS
21
1
Y
1
A
PRO
20
A
PRO
22
1
Y
1
A
SER
21
A
SER
23
1
Y
1
A
ALA
22
A
ALA
24
1
Y
1
A
GLY
23
A
GLY
25
1
Y
1
A
ASP
24
A
ASP
26
1
Y
1
A
PHE
25
A
PHE
27
1
Y
1
A
ILE
263
A
ILE
265
1
Y
1
A
SER
264
A
SER
266
1
Y
1
A
GLY
265
A
GLY
267
1
Y
1
B
GLY
-1
B
GLY
1
1
Y
1
B
SER
0
B
SER
2
1
Y
1
B
MET
1
B
MET
3
1
Y
1
B
ALA
2
B
ALA
4
1
Y
1
B
ALA
3
B
ALA
5
1
Y
1
B
ALA
4
B
ALA
6
1
Y
1
B
GLY
5
B
GLY
7
1
Y
1
B
ASN
6
B
ASN
8
1
Y
1
B
LYS
7
B
LYS
9
1
Y
1
B
ARG
173
B
ARG
175
1
Y
1
B
VAL
174
B
VAL
176
1
Y
1
B
GLN
175
B
GLN
177
1
Y
1
B
PRO
176
B
PRO
178
1
Y
1
B
THR
177
B
THR
179
1
Y
1
B
GLU
178
B
GLU
180
1
Y
1
B
ASN
179
B
ASN
181
1
Y
1
B
B
O3'
O
GDP
HOH
200
375
2.17
1
B
B
OD1
O
ASN
HOH
113
340
2.19
1
3.66
0.50
120.30
123.96
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
214
214
214
N
1
A
ASN
199
34.41
59.65
1
B
ALA
157
89.42
0.72
32.054
-0.82
0.00
0.00
1.50
0.00
-0.69
0.944
0.882
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.27282
0.19801
0.20173
2.20
55.73
1140
21179
21156
5.1
99.89
6.454
0.167
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.305
0.247
0.80
0.80
1.40
PDB ENTRY 2efc
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.20
55.73
261
3461
29
0
3171
0.013
0.022
3260
1.374
1.964
4411
5.882
5.000
400
38.521
25.226
155
17.061
15.000
572
19.439
15.000
15
0.105
0.200
492
0.006
0.021
2451
0.781
1.500
2007
1.507
2.000
3225
2.283
3.000
1253
3.844
4.500
1186
0.292
0.220
2.256
81
1528
1609
20
99.20
29.4
2.20
55.73
4G01
22362
22345
0.130
1
15.8
7.2
99.9
2.20
2.24
2.8
1100
0.691
1
7.0
99.8
data collection
HKL-2000
phasing
AMoRE
refinement
REFMAC
5.5.0088
data reduction
HKL-2000
data scaling
HKL-2000
ARA7-GDP-Ca2+/VPS9a
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
VAL
26
A
VAL
28
HELX_P
A
SER
37
A
SER
39
1
1
12
A
ASP
42
A
ASP
44
HELX_P
A
HIS
64
A
HIS
66
1
2
23
A
PRO
65
A
PRO
67
HELX_P
A
SER
68
A
SER
70
5
3
4
A
SER
71
A
SER
73
HELX_P
A
PHE
95
A
PHE
97
1
4
25
A
ASN
98
A
ASN
100
HELX_P
A
GLN
116
A
GLN
118
1
5
19
A
PRO
121
A
PRO
123
HELX_P
A
ASP
125
A
ASP
127
5
6
5
A
THR
129
A
THR
131
HELX_P
A
GLN
144
A
GLN
146
1
7
16
A
LYS
145
A
LYS
147
HELX_P
A
TYR
149
A
TYR
151
5
8
5
A
ALA
151
A
ALA
153
HELX_P
A
SER
177
A
SER
179
1
9
27
A
GLY
183
A
GLY
185
HELX_P
A
ASN
199
A
ASN
201
1
10
17
A
GLN
202
A
GLN
204
HELX_P
A
ARG
214
A
ARG
216
1
11
13
A
ARG
215
A
ARG
217
HELX_P
A
LEU
219
A
LEU
221
5
12
5
A
VAL
220
A
VAL
222
HELX_P
A
ASN
239
A
ASN
241
1
13
20
A
ALA
242
A
ALA
244
HELX_P
A
SER
246
A
SER
248
5
14
5
A
ASP
248
A
ASP
250
HELX_P
A
ALA
261
A
ALA
263
1
15
14
B
GLY
22
B
GLY
24
HELX_P
B
PHE
35
B
PHE
37
1
16
14
B
VAL
36
B
VAL
38
HELX_P
B
PHE
38
B
PHE
40
5
17
3
B
GLN
69
B
GLN
71
HELX_P
B
SER
74
B
SER
76
5
18
6
B
LEU
75
B
LEU
77
HELX_P
B
ARG
81
B
ARG
83
1
19
7
B
ASN
94
B
ASN
96
HELX_P
B
GLY
112
B
GLY
114
1
20
19
B
LEU
127
B
LEU
129
HELX_P
B
ARG
131
B
ARG
133
5
21
5
B
THR
134
B
THR
136
HELX_P
B
ASN
145
B
ASN
147
1
22
12
B
ASN
159
B
ASN
161
HELX_P
B
LEU
171
B
LEU
173
1
23
13
metalc
2.347
A
PRO
182
A
O
PRO
184
1_555
A
CA
300
C
CA
CA
1_555
metalc
2.477
A
ASP
185
A
OD2
ASP
187
1_555
A
CA
300
C
CA
CA
1_555
metalc
2.428
A
CA
300
C
CA
CA
1_555
A
HOH
404
E
O
HOH
1_555
metalc
2.402
A
CA
300
C
CA
CA
1_555
A
HOH
410
E
O
HOH
1_555
metalc
2.536
A
CA
300
C
CA
CA
1_555
A
HOH
485
E
O
HOH
1_555
metalc
2.383
A
CA
300
C
CA
CA
1_555
B
SER
24
B
OG
SER
26
1_555
metalc
2.235
A
CA
300
C
CA
CA
1_555
B
GDP
200
D
O2B
GDP
1_555
TRANSPORT PROTEIN
GTPase-GDP-metal-GEF complex, vps9 domain, Ras super family, guanine nucleotide exchange factor, small GTPase, GDP/GTP binding, divalent metal binding, geranylgeranylation, TRANSPORT PROTEIN
B
ASN
55
B
ASN
57
1
B
ASP
56
B
ASP
58
-19.57
VPS9A_ARATH
UNP
1
1
Q9LT31
MENTDVFLGLHDFLERMRKPSAGDFVKSIKSFIVSFSNNAPDPEKDCAMVQEFFSKMEAAFRAHPLWSGCSEEELDSAGD
GLEKYVMTKLFTRVFASNTEEVIADEKLFQKMSLVQQFISPENLDIQPTFQNESSWLLAQKELQKINMYKAPRDKLVCIL
NCCKVINNLLLNASIASNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRESKLVGEAAYFFTNILSAESFISNI
DAKSISLDEAEFEKNMESARARISG
RAF2B_ARATH
UNP
2
1
Q9SN68
MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYY
RGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNV
KEIFYEIARRLPRVQPTEN
1
265
4G01
1
265
Q9LT31
A
1
3
267
1
179
4G01
1
179
Q9SN68
B
2
3
181
1
expression tag
GLY
-1
4G01
A
Q9LT31
UNP
1
1
expression tag
SER
0
4G01
A
Q9LT31
UNP
2
2
expression tag
GLY
-1
4G01
B
Q9SN68
UNP
1
2
expression tag
SER
0
4G01
B
Q9SN68
UNP
2
7
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
B
SER
41
B
SER
43
B
ILE
43
B
ILE
45
B
PHE
47
B
PHE
49
B
VAL
54
B
VAL
56
B
ALA
57
B
ALA
59
B
TRP
64
B
TRP
66
B
ILE
9
B
ILE
11
B
LEU
16
B
LEU
18
B
ALA
85
B
ALA
87
B
ASP
91
B
ASP
93
B
VAL
117
B
VAL
119
B
ASN
123
B
ASN
125
B
PHE
148
B
PHE
150
B
GLU
151
B
GLU
153
BINDING SITE FOR RESIDUE CA A 300
A
CA
300
Software
7
BINDING SITE FOR RESIDUE GDP B 200
B
GDP
200
Software
19
A
PRO
182
A
PRO
184
7
1_555
A
ASP
185
A
ASP
187
7
1_555
A
HOH
404
E
HOH
7
1_555
A
HOH
410
E
HOH
7
1_555
A
HOH
485
E
HOH
7
1_555
B
SER
24
B
SER
26
7
1_555
B
GDP
200
D
GDP
7
1_555
A
ASN
180
A
ASN
182
19
1_555
A
CA
300
C
CA
19
1_555
A
HOH
404
E
HOH
19
1_555
A
HOH
485
E
HOH
19
1_555
B
GLY
20
B
GLY
22
19
1_555
B
ALA
21
B
ALA
23
19
1_555
B
GLY
22
B
GLY
24
19
1_555
B
LYS
23
B
LYS
25
19
1_555
B
SER
24
B
SER
26
19
1_555
B
SER
25
B
SER
27
19
1_555
B
ASN
123
B
ASN
125
19
1_555
B
LYS
124
B
LYS
126
19
1_555
B
ASP
126
B
ASP
128
19
1_555
B
LEU
127
B
LEU
129
19
1_555
B
SER
153
B
SER
155
19
1_555
B
ALA
154
B
ALA
156
19
1_555
B
LYS
155
B
LYS
157
19
1_555
B
HOH
322
F
HOH
19
1_555
B
HOH
375
F
HOH
19
1_555
19
P 21 21 21