0.015589
0.009000
0.000000
0.000000
0.018001
0.000000
0.000000
0.000000
0.003630
0.000000
0.000000
0.000000
Li, H.
Jogl, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
64.148
64.148
275.462
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Proteins
PSFGEY
0867
0887-3585
81
538
543
10.1002/prot.24220
23184707
Crystal structure of decaprenylphosphoryl-beta- D-ribose 2'-epimerase from Mycobacterium smegmatis.
2013
10.2210/pdb4g3t/pdb
pdb_00004g3t
100
1
CCD
2010-01-31
MAR CCD 165 mm
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
X4C
NSLS
0.979
SYNCHROTRON
NSLS BEAMLINE X4C
44441.180
oxidoreductase DprE1
1.-.-.-
UNP residues 66-468
1
man
polymer
18.015
water
77
nat
water
no
no
SYGDNAQNGGGLVIDMPALNRIHSIDSGTRLVDVDAGVSLDQLMKAALPHGLWVPVLPGTRQVTVGGAIGCDIHGKNHHS
AGSFGNHVRSMELLTANGEVRHLTPAGPDSDLFWATVGGNGLTGIILRATIEMTPTETAYFIADGDVTGSLDETIAFHSD
GSEANYTYSSAWFDAISKPPKLGRAAISRGSLAKLDQLPSKLQKDPLKFDAPQLLTLPDIFPNGLANKFTFMPIGELWYR
KSGTYRNKVQNLTQFYHPLDMFGEWNRAYGSAGFLQYQFVVPTEAVEEFKSIIVDIQRSGHYSFLNVFKLFGPGNQAPLS
FPIPGWNVCVDFPIKAGLHEFVTELDRRVLEFGGRLYTAKDSRTTAETFHAMYPRIDEWIRIRRSVDPDGVFASDMARRL
QLL
SYGDNAQNGGGLVIDMPALNRIHSIDSGTRLVDVDAGVSLDQLMKAALPHGLWVPVLPGTRQVTVGGAIGCDIHGKNHHS
AGSFGNHVRSMELLTANGEVRHLTPAGPDSDLFWATVGGNGLTGIILRATIEMTPTETAYFIADGDVTGSLDETIAFHSD
GSEANYTYSSAWFDAISKPPKLGRAAISRGSLAKLDQLPSKLQKDPLKFDAPQLLTLPDIFPNGLANKFTFMPIGELWYR
KSGTYRNKVQNLTQFYHPLDMFGEWNRAYGSAGFLQYQFVVPTEAVEEFKSIIVDIQRSGHYSFLNVFKLFGPGNQAPLS
FPIPGWNVCVDFPIKAGLHEFVTELDRRVLEFGGRLYTAKDSRTTAETFHAMYPRIDEWIRIRRSVDPDGVFASDMARRL
QLL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC607
sample
MSMEG_6382
1772
Mycobacterium smegmatis
511693
Escherichia coli
BL21Star
plasmid
pET28a
1
3.68
66.59
SITTING DROP
6.8
15-20% isopropanol, 0.2 M sodium citrate, 0.5% N,N-dimethyldodecylamine-N-oxide, pH 6.8, SITTING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Database references
Data collection
Database references
1
0
2012-12-05
1
1
2013-08-28
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2012-07-15
REL
REL
HOH
water
HOH
1
2
HOH
HOH
501
A
HOH
2
2
HOH
HOH
502
A
HOH
3
2
HOH
HOH
503
A
HOH
4
2
HOH
HOH
504
A
HOH
5
2
HOH
HOH
505
A
HOH
6
2
HOH
HOH
506
A
HOH
7
2
HOH
HOH
507
A
HOH
8
2
HOH
HOH
508
A
HOH
9
2
HOH
HOH
509
A
HOH
10
2
HOH
HOH
510
A
HOH
11
2
HOH
HOH
511
A
HOH
12
2
HOH
HOH
512
A
HOH
13
2
HOH
HOH
513
A
HOH
14
2
HOH
HOH
514
A
HOH
15
2
HOH
HOH
515
A
HOH
16
2
HOH
HOH
516
A
HOH
17
2
HOH
HOH
517
A
HOH
18
2
HOH
HOH
518
A
HOH
19
2
HOH
HOH
519
A
HOH
20
2
HOH
HOH
520
A
HOH
21
2
HOH
HOH
521
A
HOH
22
2
HOH
HOH
522
A
HOH
23
2
HOH
HOH
523
A
HOH
24
2
HOH
HOH
524
A
HOH
25
2
HOH
HOH
525
A
HOH
26
2
HOH
HOH
526
A
HOH
27
2
HOH
HOH
527
A
HOH
28
2
HOH
HOH
528
A
HOH
29
2
HOH
HOH
529
A
HOH
30
2
HOH
HOH
530
A
HOH
31
2
HOH
HOH
531
A
HOH
32
2
HOH
HOH
532
A
HOH
33
2
HOH
HOH
533
A
HOH
34
2
HOH
HOH
534
A
HOH
35
2
HOH
HOH
535
A
HOH
36
2
HOH
HOH
536
A
HOH
37
2
HOH
HOH
537
A
HOH
38
2
HOH
HOH
538
A
HOH
39
2
HOH
HOH
539
A
HOH
40
2
HOH
HOH
540
A
HOH
41
2
HOH
HOH
541
A
HOH
42
2
HOH
HOH
542
A
HOH
43
2
HOH
HOH
543
A
HOH
44
2
HOH
HOH
544
A
HOH
45
2
HOH
HOH
545
A
HOH
46
2
HOH
HOH
546
A
HOH
47
2
HOH
HOH
547
A
HOH
48
2
HOH
HOH
548
A
HOH
49
2
HOH
HOH
549
A
HOH
50
2
HOH
HOH
550
A
HOH
51
2
HOH
HOH
551
A
HOH
52
2
HOH
HOH
552
A
HOH
53
2
HOH
HOH
553
A
HOH
54
2
HOH
HOH
554
A
HOH
55
2
HOH
HOH
555
A
HOH
56
2
HOH
HOH
556
A
HOH
57
2
HOH
HOH
557
A
HOH
58
2
HOH
HOH
558
A
HOH
59
2
HOH
HOH
559
A
HOH
60
2
HOH
HOH
560
A
HOH
61
2
HOH
HOH
561
A
HOH
62
2
HOH
HOH
562
A
HOH
63
2
HOH
HOH
563
A
HOH
64
2
HOH
HOH
564
A
HOH
65
2
HOH
HOH
565
A
HOH
66
2
HOH
HOH
566
A
HOH
67
2
HOH
HOH
567
A
HOH
68
2
HOH
HOH
568
A
HOH
69
2
HOH
HOH
569
A
HOH
70
2
HOH
HOH
570
A
HOH
71
2
HOH
HOH
571
A
HOH
72
2
HOH
HOH
572
A
HOH
73
2
HOH
HOH
573
A
HOH
74
2
HOH
HOH
574
A
HOH
75
2
HOH
HOH
575
A
HOH
76
2
HOH
HOH
576
A
HOH
77
2
HOH
HOH
577
A
n
1
66
A
n
2
67
A
n
3
68
A
n
4
69
A
n
5
70
A
n
6
71
A
n
7
72
A
n
8
73
A
n
9
74
A
n
10
75
A
n
11
76
A
n
12
77
A
n
13
78
A
n
14
79
A
n
15
80
A
n
16
81
A
n
17
82
A
n
18
83
A
n
19
84
A
ASN
85
n
20
ASN
85
A
ARG
86
n
21
ARG
86
A
ILE
87
n
22
ILE
87
A
HIS
88
n
23
HIS
88
A
SER
89
n
24
SER
89
A
ILE
90
n
25
ILE
90
A
ASP
91
n
26
ASP
91
A
SER
92
n
27
SER
92
A
GLY
93
n
28
GLY
93
A
THR
94
n
29
THR
94
A
ARG
95
n
30
ARG
95
A
LEU
96
n
31
LEU
96
A
VAL
97
n
32
VAL
97
A
ASP
98
n
33
ASP
98
A
VAL
99
n
34
VAL
99
A
ASP
100
n
35
ASP
100
A
ALA
101
n
36
ALA
101
A
GLY
102
n
37
GLY
102
A
VAL
103
n
38
VAL
103
A
SER
104
n
39
SER
104
A
LEU
105
n
40
LEU
105
A
ASP
106
n
41
ASP
106
A
GLN
107
n
42
GLN
107
A
LEU
108
n
43
LEU
108
A
MET
109
n
44
MET
109
A
LYS
110
n
45
LYS
110
A
ALA
111
n
46
ALA
111
A
ALA
112
n
47
ALA
112
A
LEU
113
n
48
LEU
113
A
PRO
114
n
49
PRO
114
A
HIS
115
n
50
HIS
115
A
GLY
116
n
51
GLY
116
A
LEU
117
n
52
LEU
117
A
TRP
118
n
53
TRP
118
A
VAL
119
n
54
VAL
119
A
PRO
120
n
55
PRO
120
A
VAL
121
n
56
VAL
121
A
LEU
122
n
57
LEU
122
A
PRO
123
n
58
PRO
123
A
GLY
124
n
59
GLY
124
A
THR
125
n
60
THR
125
A
ARG
126
n
61
ARG
126
A
GLN
127
n
62
GLN
127
A
VAL
128
n
63
VAL
128
A
THR
129
n
64
THR
129
A
VAL
130
n
65
VAL
130
A
GLY
131
n
66
GLY
131
A
GLY
132
n
67
GLY
132
A
ALA
133
n
68
ALA
133
A
ILE
134
n
69
ILE
134
A
GLY
135
n
70
GLY
135
A
CYS
136
n
71
CYS
136
A
ASP
137
n
72
ASP
137
A
ILE
138
n
73
ILE
138
A
HIS
139
n
74
HIS
139
A
GLY
140
n
75
GLY
140
A
LYS
141
n
76
LYS
141
A
ASN
142
n
77
ASN
142
A
HIS
143
n
78
HIS
143
A
HIS
144
n
79
HIS
144
A
SER
145
n
80
SER
145
A
ALA
146
n
81
ALA
146
A
GLY
147
n
82
GLY
147
A
SER
148
n
83
SER
148
A
PHE
149
n
84
PHE
149
A
GLY
150
n
85
GLY
150
A
ASN
151
n
86
ASN
151
A
HIS
152
n
87
HIS
152
A
VAL
153
n
88
VAL
153
A
ARG
154
n
89
ARG
154
A
SER
155
n
90
SER
155
A
MET
156
n
91
MET
156
A
GLU
157
n
92
GLU
157
A
LEU
158
n
93
LEU
158
A
LEU
159
n
94
LEU
159
A
THR
160
n
95
THR
160
A
ALA
161
n
96
ALA
161
A
ASN
162
n
97
ASN
162
A
GLY
163
n
98
GLY
163
A
GLU
164
n
99
GLU
164
A
VAL
165
n
100
VAL
165
A
ARG
166
n
101
ARG
166
A
HIS
167
n
102
HIS
167
A
LEU
168
n
103
LEU
168
A
THR
169
n
104
THR
169
A
PRO
170
n
105
PRO
170
A
ALA
171
n
106
ALA
171
A
GLY
172
n
107
GLY
172
A
PRO
173
n
108
PRO
173
A
ASP
174
n
109
ASP
174
A
SER
175
n
110
SER
175
A
ASP
176
n
111
ASP
176
A
LEU
177
n
112
LEU
177
A
PHE
178
n
113
PHE
178
A
TRP
179
n
114
TRP
179
A
ALA
180
n
115
ALA
180
A
THR
181
n
116
THR
181
A
VAL
182
n
117
VAL
182
A
GLY
183
n
118
GLY
183
A
GLY
184
n
119
GLY
184
A
ASN
185
n
120
ASN
185
A
GLY
186
n
121
GLY
186
A
LEU
187
n
122
LEU
187
A
THR
188
n
123
THR
188
A
GLY
189
n
124
GLY
189
A
ILE
190
n
125
ILE
190
A
ILE
191
n
126
ILE
191
A
LEU
192
n
127
LEU
192
A
ARG
193
n
128
ARG
193
A
ALA
194
n
129
ALA
194
A
THR
195
n
130
THR
195
A
ILE
196
n
131
ILE
196
A
GLU
197
n
132
GLU
197
A
MET
198
n
133
MET
198
A
THR
199
n
134
THR
199
A
PRO
200
n
135
PRO
200
A
THR
201
n
136
THR
201
A
GLU
202
n
137
GLU
202
A
THR
203
n
138
THR
203
A
ALA
204
n
139
ALA
204
A
TYR
205
n
140
TYR
205
A
PHE
206
n
141
PHE
206
A
ILE
207
n
142
ILE
207
A
ALA
208
n
143
ALA
208
A
ASP
209
n
144
ASP
209
A
GLY
210
n
145
GLY
210
A
ASP
211
n
146
ASP
211
A
VAL
212
n
147
VAL
212
A
THR
213
n
148
THR
213
A
GLY
214
n
149
GLY
214
A
SER
215
n
150
SER
215
A
LEU
216
n
151
LEU
216
A
ASP
217
n
152
ASP
217
A
GLU
218
n
153
GLU
218
A
THR
219
n
154
THR
219
A
ILE
220
n
155
ILE
220
A
ALA
221
n
156
ALA
221
A
PHE
222
n
157
PHE
222
A
HIS
223
n
158
HIS
223
A
SER
224
n
159
SER
224
A
ASP
225
n
160
ASP
225
A
GLY
226
n
161
GLY
226
A
SER
227
n
162
SER
227
A
GLU
228
n
163
GLU
228
A
ALA
229
n
164
ALA
229
A
ASN
230
n
165
ASN
230
A
TYR
231
n
166
TYR
231
A
THR
232
n
167
THR
232
A
TYR
233
n
168
TYR
233
A
SER
234
n
169
SER
234
A
SER
235
n
170
SER
235
A
ALA
236
n
171
ALA
236
A
TRP
237
n
172
TRP
237
A
PHE
238
n
173
PHE
238
A
ASP
239
n
174
ASP
239
A
ALA
240
n
175
ALA
240
A
ILE
241
n
176
ILE
241
A
SER
242
n
177
SER
242
A
LYS
243
n
178
LYS
243
A
PRO
244
n
179
PRO
244
A
PRO
245
n
180
PRO
245
A
LYS
246
n
181
LYS
246
A
LEU
247
n
182
LEU
247
A
GLY
248
n
183
GLY
248
A
ARG
249
n
184
ARG
249
A
ALA
250
n
185
ALA
250
A
ALA
251
n
186
ALA
251
A
ILE
252
n
187
ILE
252
A
SER
253
n
188
SER
253
A
ARG
254
n
189
ARG
254
A
GLY
255
n
190
GLY
255
A
SER
256
n
191
SER
256
A
LEU
257
n
192
LEU
257
A
ALA
258
n
193
ALA
258
A
LYS
259
n
194
LYS
259
A
LEU
260
n
195
LEU
260
A
ASP
261
n
196
ASP
261
A
GLN
262
n
197
GLN
262
A
LEU
263
n
198
LEU
263
A
PRO
264
n
199
PRO
264
A
SER
265
n
200
SER
265
A
LYS
266
n
201
LYS
266
A
LEU
267
n
202
LEU
267
A
GLN
268
n
203
GLN
268
A
LYS
269
n
204
LYS
269
A
ASP
270
n
205
ASP
270
A
PRO
271
n
206
PRO
271
A
LEU
272
n
207
LEU
272
A
LYS
273
n
208
LYS
273
A
PHE
274
n
209
PHE
274
A
n
210
275
A
n
211
276
A
n
212
277
A
n
213
278
A
n
214
279
A
n
215
280
A
n
216
281
A
n
217
282
A
n
218
283
A
n
219
284
A
n
220
285
A
n
221
286
A
n
222
287
A
n
223
288
A
n
224
289
A
n
225
290
A
n
226
291
A
n
227
292
A
n
228
293
A
n
229
294
A
n
230
295
A
n
231
296
A
n
232
297
A
n
233
298
A
n
234
299
A
n
235
300
A
n
236
301
A
n
237
302
A
n
238
303
A
n
239
304
A
n
240
305
A
n
241
306
A
n
242
307
A
GLY
308
n
243
GLY
308
A
THR
309
n
244
THR
309
A
TYR
310
n
245
TYR
310
A
ARG
311
n
246
ARG
311
A
ASN
312
n
247
ASN
312
A
LYS
313
n
248
LYS
313
A
VAL
314
n
249
VAL
314
A
GLN
315
n
250
GLN
315
A
ASN
316
n
251
ASN
316
A
LEU
317
n
252
LEU
317
A
THR
318
n
253
THR
318
A
GLN
319
n
254
GLN
319
A
PHE
320
n
255
PHE
320
A
TYR
321
n
256
TYR
321
A
HIS
322
n
257
HIS
322
A
n
258
323
A
n
259
324
A
n
260
325
A
n
261
326
A
n
262
327
A
n
263
328
A
n
264
329
A
n
265
330
A
n
266
331
A
n
267
332
A
n
268
333
A
n
269
334
A
n
270
335
A
n
271
336
A
n
272
337
A
GLY
338
n
273
GLY
338
A
PHE
339
n
274
PHE
339
A
LEU
340
n
275
LEU
340
A
GLN
341
n
276
GLN
341
A
TYR
342
n
277
TYR
342
A
GLN
343
n
278
GLN
343
A
PHE
344
n
279
PHE
344
A
VAL
345
n
280
VAL
345
A
VAL
346
n
281
VAL
346
A
PRO
347
n
282
PRO
347
A
THR
348
n
283
THR
348
A
GLU
349
n
284
GLU
349
A
ALA
350
n
285
ALA
350
A
VAL
351
n
286
VAL
351
A
GLU
352
n
287
GLU
352
A
GLU
353
n
288
GLU
353
A
PHE
354
n
289
PHE
354
A
LYS
355
n
290
LYS
355
A
SER
356
n
291
SER
356
A
ILE
357
n
292
ILE
357
A
ILE
358
n
293
ILE
358
A
VAL
359
n
294
VAL
359
A
ASP
360
n
295
ASP
360
A
ILE
361
n
296
ILE
361
A
GLN
362
n
297
GLN
362
A
ARG
363
n
298
ARG
363
A
SER
364
n
299
SER
364
A
GLY
365
n
300
GLY
365
A
HIS
366
n
301
HIS
366
A
TYR
367
n
302
TYR
367
A
SER
368
n
303
SER
368
A
PHE
369
n
304
PHE
369
A
LEU
370
n
305
LEU
370
A
ASN
371
n
306
ASN
371
A
VAL
372
n
307
VAL
372
A
PHE
373
n
308
PHE
373
A
LYS
374
n
309
LYS
374
A
LEU
375
n
310
LEU
375
A
PHE
376
n
311
PHE
376
A
GLY
377
n
312
GLY
377
A
PRO
378
n
313
PRO
378
A
GLY
379
n
314
GLY
379
A
ASN
380
n
315
ASN
380
A
GLN
381
n
316
GLN
381
A
ALA
382
n
317
ALA
382
A
PRO
383
n
318
PRO
383
A
LEU
384
n
319
LEU
384
A
SER
385
n
320
SER
385
A
PHE
386
n
321
PHE
386
A
PRO
387
n
322
PRO
387
A
ILE
388
n
323
ILE
388
A
PRO
389
n
324
PRO
389
A
GLY
390
n
325
GLY
390
A
TRP
391
n
326
TRP
391
A
ASN
392
n
327
ASN
392
A
VAL
393
n
328
VAL
393
A
CYS
394
n
329
CYS
394
A
VAL
395
n
330
VAL
395
A
ASP
396
n
331
ASP
396
A
PHE
397
n
332
PHE
397
A
PRO
398
n
333
PRO
398
A
ILE
399
n
334
ILE
399
A
LYS
400
n
335
LYS
400
A
ALA
401
n
336
ALA
401
A
GLY
402
n
337
GLY
402
A
LEU
403
n
338
LEU
403
A
HIS
404
n
339
HIS
404
A
GLU
405
n
340
GLU
405
A
PHE
406
n
341
PHE
406
A
VAL
407
n
342
VAL
407
A
THR
408
n
343
THR
408
A
GLU
409
n
344
GLU
409
A
LEU
410
n
345
LEU
410
A
ASP
411
n
346
ASP
411
A
ARG
412
n
347
ARG
412
A
ARG
413
n
348
ARG
413
A
VAL
414
n
349
VAL
414
A
LEU
415
n
350
LEU
415
A
GLU
416
n
351
GLU
416
A
PHE
417
n
352
PHE
417
A
GLY
418
n
353
GLY
418
A
GLY
419
n
354
GLY
419
A
ARG
420
n
355
ARG
420
A
LEU
421
n
356
LEU
421
A
TYR
422
n
357
TYR
422
A
THR
423
n
358
THR
423
A
ALA
424
n
359
ALA
424
A
LYS
425
n
360
LYS
425
A
ASP
426
n
361
ASP
426
A
SER
427
n
362
SER
427
A
ARG
428
n
363
ARG
428
A
THR
429
n
364
THR
429
A
THR
430
n
365
THR
430
A
ALA
431
n
366
ALA
431
A
GLU
432
n
367
GLU
432
A
THR
433
n
368
THR
433
A
PHE
434
n
369
PHE
434
A
HIS
435
n
370
HIS
435
A
ALA
436
n
371
ALA
436
A
MET
437
n
372
MET
437
A
TYR
438
n
373
TYR
438
A
PRO
439
n
374
PRO
439
A
ARG
440
n
375
ARG
440
A
ILE
441
n
376
ILE
441
A
ASP
442
n
377
ASP
442
A
GLU
443
n
378
GLU
443
A
TRP
444
n
379
TRP
444
A
ILE
445
n
380
ILE
445
A
ARG
446
n
381
ARG
446
A
ILE
447
n
382
ILE
447
A
ARG
448
n
383
ARG
448
A
ARG
449
n
384
ARG
449
A
SER
450
n
385
SER
450
A
VAL
451
n
386
VAL
451
A
ASP
452
n
387
ASP
452
A
PRO
453
n
388
PRO
453
A
ASP
454
n
389
ASP
454
A
GLY
455
n
390
GLY
455
A
VAL
456
n
391
VAL
456
A
PHE
457
n
392
PHE
457
A
ALA
458
n
393
ALA
458
A
SER
459
n
394
SER
459
A
ASP
460
n
395
ASP
460
A
MET
461
n
396
MET
461
A
ALA
462
n
397
ALA
462
A
ARG
463
n
398
ARG
463
A
ARG
464
n
399
ARG
464
A
LEU
465
n
400
LEU
465
A
GLN
466
n
401
GLN
466
A
LEU
467
n
402
LEU
467
A
LEU
468
n
403
LEU
468
A
0.3989
-0.1457
0.0928
0.0562
-0.0747
0.5898
0.1020
-0.4651
0.1229
-0.0098
0.1376
-0.0139
-0.8355
-0.4296
0.0077
0.5451
0.1846
0.0054
0.8608
-0.0455
0.4729
refined
-17.2571
-14.6232
14.0386
X-RAY DIFFRACTION
0.0023
0.0976
0.2364
0.2431
-0.0745
0.6557
0.0732
-0.0736
-0.0370
-0.1282
-0.0068
-0.1025
-0.3602
-0.1308
-0.0065
0.3328
0.0403
0.0322
0.8081
0.0089
0.4879
refined
-7.0570
-21.0770
18.4974
X-RAY DIFFRACTION
0.4108
-0.0011
-0.1955
0.6466
-0.0637
0.0857
0.0808
-0.0094
0.1273
0.1121
0.0218
0.0137
0.0180
-0.5832
0.1560
0.2568
-0.0296
0.0028
1.0336
-0.0090
0.5914
refined
-17.0652
-24.5171
37.6700
X-RAY DIFFRACTION
0.4030
0.4244
-0.1184
0.3720
-0.3348
0.2975
0.0840
-0.0216
0.0441
0.0341
0.0328
0.1047
-0.2073
-0.2590
0.1267
0.2649
0.0871
0.0148
0.8267
-0.0399
0.5422
refined
-7.5831
-20.3564
35.7082
X-RAY DIFFRACTION
0.0621
-0.0477
0.1860
0.0341
-0.1374
0.5678
0.1524
-0.2285
0.0244
0.2597
-0.2701
-0.0240
-0.5922
-0.0933
0.0017
0.4427
-0.1050
-0.0192
0.8712
-0.0191
0.6017
refined
6.0190
-15.2531
40.3840
X-RAY DIFFRACTION
0.8275
-0.0776
-0.4979
0.9598
-0.4468
0.6632
-0.1906
0.0336
-0.0687
0.2915
0.1399
-0.3631
-0.4290
0.9674
-0.0454
-0.0688
-0.1843
0.1051
1.3097
0.0197
0.5612
refined
10.9941
-15.4912
21.1760
X-RAY DIFFRACTION
A
85
A
129
X-RAY DIFFRACTION
1
chain 'A' and ( resid 85 through 129 )
A
130
A
223
X-RAY DIFFRACTION
2
chain 'A' and ( resid 130 through 223 )
A
224
A
268
X-RAY DIFFRACTION
3
chain 'A' and ( resid 224 through 268 )
A
269
A
389
X-RAY DIFFRACTION
4
chain 'A' and ( resid 269 through 389 )
A
390
A
416
X-RAY DIFFRACTION
5
chain 'A' and ( resid 390 through 416 )
A
417
A
468
X-RAY DIFFRACTION
6
chain 'A' and ( resid 417 through 468 )
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
89
A
N
SER
24
A
O
ASP
98
A
O
ASP
33
A
N
VAL
99
A
N
VAL
34
A
O
ALA
194
A
O
ALA
129
A
O
THR
195
A
O
THR
130
A
N
SER
155
A
N
SER
90
A
N
MET
156
A
N
MET
91
A
O
LEU
168
A
O
LEU
103
A
N
TRP
118
A
N
TRP
53
A
O
THR
199
A
O
THR
134
A
O
GLN
315
A
O
GLN
250
A
N
PHE
206
A
N
PHE
141
A
N
ASP
211
A
N
ASP
146
A
O
ILE
252
A
O
ILE
187
A
O
GLY
255
A
O
GLY
190
A
N
TYR
233
A
N
TYR
168
A
N
ALA
236
A
N
ALA
171
A
O
PHE
373
A
O
PHE
308
A
N
LYS
374
A
N
LYS
309
A
O
ASN
392
A
O
ASN
327
A
O
VAL
395
A
O
VAL
330
A
N
TYR
342
A
N
TYR
277
A
N
VAL
345
A
N
VAL
280
A
O
ARG
420
A
O
ARG
355
1
A
SER
66
A
SER
1
1
Y
1
A
TYR
67
A
TYR
2
1
Y
1
A
GLY
68
A
GLY
3
1
Y
1
A
ASP
69
A
ASP
4
1
Y
1
A
ASN
70
A
ASN
5
1
Y
1
A
ALA
71
A
ALA
6
1
Y
1
A
GLN
72
A
GLN
7
1
Y
1
A
ASN
73
A
ASN
8
1
Y
1
A
GLY
74
A
GLY
9
1
Y
1
A
GLY
75
A
GLY
10
1
Y
1
A
GLY
76
A
GLY
11
1
Y
1
A
LEU
77
A
LEU
12
1
Y
1
A
VAL
78
A
VAL
13
1
Y
1
A
ILE
79
A
ILE
14
1
Y
1
A
ASP
80
A
ASP
15
1
Y
1
A
MET
81
A
MET
16
1
Y
1
A
PRO
82
A
PRO
17
1
Y
1
A
ALA
83
A
ALA
18
1
Y
1
A
LEU
84
A
LEU
19
1
Y
1
A
ASP
275
A
ASP
210
1
Y
1
A
ALA
276
A
ALA
211
1
Y
1
A
PRO
277
A
PRO
212
1
Y
1
A
GLN
278
A
GLN
213
1
Y
1
A
LEU
279
A
LEU
214
1
Y
1
A
LEU
280
A
LEU
215
1
Y
1
A
THR
281
A
THR
216
1
Y
1
A
LEU
282
A
LEU
217
1
Y
1
A
PRO
283
A
PRO
218
1
Y
1
A
ASP
284
A
ASP
219
1
Y
1
A
ILE
285
A
ILE
220
1
Y
1
A
PHE
286
A
PHE
221
1
Y
1
A
PRO
287
A
PRO
222
1
Y
1
A
ASN
288
A
ASN
223
1
Y
1
A
GLY
289
A
GLY
224
1
Y
1
A
LEU
290
A
LEU
225
1
Y
1
A
ALA
291
A
ALA
226
1
Y
1
A
ASN
292
A
ASN
227
1
Y
1
A
LYS
293
A
LYS
228
1
Y
1
A
PHE
294
A
PHE
229
1
Y
1
A
THR
295
A
THR
230
1
Y
1
A
PHE
296
A
PHE
231
1
Y
1
A
MET
297
A
MET
232
1
Y
1
A
PRO
298
A
PRO
233
1
Y
1
A
ILE
299
A
ILE
234
1
Y
1
A
GLY
300
A
GLY
235
1
Y
1
A
GLU
301
A
GLU
236
1
Y
1
A
LEU
302
A
LEU
237
1
Y
1
A
TRP
303
A
TRP
238
1
Y
1
A
TYR
304
A
TYR
239
1
Y
1
A
ARG
305
A
ARG
240
1
Y
1
A
LYS
306
A
LYS
241
1
Y
1
A
SER
307
A
SER
242
1
Y
1
A
PRO
323
A
PRO
258
1
Y
1
A
LEU
324
A
LEU
259
1
Y
1
A
ASP
325
A
ASP
260
1
Y
1
A
MET
326
A
MET
261
1
Y
1
A
PHE
327
A
PHE
262
1
Y
1
A
GLY
328
A
GLY
263
1
Y
1
A
GLU
329
A
GLU
264
1
Y
1
A
TRP
330
A
TRP
265
1
Y
1
A
ASN
331
A
ASN
266
1
Y
1
A
ARG
332
A
ARG
267
1
Y
1
A
ALA
333
A
ALA
268
1
Y
1
A
TYR
334
A
TYR
269
1
Y
1
A
GLY
335
A
GLY
270
1
Y
1
A
SER
336
A
SER
271
1
Y
1
A
ALA
337
A
ALA
272
1
Y
1
A
A
O
O
HOH
HOH
559
563
1.83
1
A
A
O
O
HOH
HOH
553
554
1.91
1
A
A
O
O
HOH
HOH
550
552
2.17
1
A
A
O
O
HOH
HOH
558
560
2.17
1
A
ASN
185
-105.23
45.46
1
A
ALA
424
-107.41
-163.26
1
A
THR
429
-165.12
116.18
161.140
69.4773
40.330
11.4955
-0.0000
-0.0000
11.4955
-0.0000
-25.5966
0.2556
0.2272
0.2286
2.346
43.239
1288
28559
28559
4.51
99.51
1.000
1.000
0.3800
RANDOM
1
1.990
SAD
31.0600
0.9800
1.2000
ML
FLAT BULK SOLVENT MODEL
47.2140
0.3310
2.346
43.239
77
2695
0
0
2618
0.003
2683
0.724
3641
0.052
400
0.002
474
10.999
964
0.3397
0.3239
2.4404
91
3000
3091
9
99.0
0.3478
0.3135
2.5514
109
3011
3120
9
100.0
0.3267
0.2768
2.6859
147
2980
3127
9
100.0
0.3109
0.2775
2.8542
146
2961
3107
9
100.0
0.3420
0.2494
3.0745
160
3002
3162
9
100.0
0.3148
0.2669
3.3838
150
3013
3163
9
100.0
0.2458
0.2299
3.8731
156
3007
3163
9
100.0
0.1885
0.1812
4.8787
154
3096
3250
9
100.0
0.2395
0.2025
43.2459
175
3201
3376
9
98.0
59.372
2.346
47.531
4G3T
28709
28628
-3.000
0.122
1
10.740
9.1
99.700
0.012
2.346
2.490
2.010
41171
4549
1
99.5
0.012
2.490
2.660
3.010
39371
4257
1
100.0
0.012
2.660
2.870
4.860
36711
3972
1
100.0
0.012
2.870
3.140
7.720
34069
3694
1
100.0
0.012
3.140
3.510
12.510
30762
3356
1
100.0
0.012
3.510
4.050
18.970
27348
3008
1
100.0
0.012
4.050
4.960
23.630
22932
2568
1
100.0
0.012
4.960
6.970
23.820
17620
2038
1
100.0
0.012
6.970
47.531
24.730
8975
1186
1
95.4
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
dev_1000
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
CBASS
data reduction
XDS
data scaling
XDS
phasing
SnB
Mycobacterium smegmatis DprE1 - hexagonal crystal form
1
N
N
2
N
N
A
SER
104
A
SER
39
HELX_P
A
LEU
113
A
LEU
48
1
1
10
A
THR
129
A
THR
64
HELX_P
A
CYS
136
A
CYS
71
1
2
8
A
ASN
142
A
ASN
77
HELX_P
A
GLY
147
A
GLY
82
1
3
6
A
SER
148
A
SER
83
HELX_P
A
ASN
151
A
ASN
86
5
4
4
A
ASP
174
A
ASP
109
HELX_P
A
GLY
184
A
GLY
119
1
5
11
A
SER
215
A
SER
150
HELX_P
A
HIS
223
A
HIS
158
1
6
9
A
GLY
226
A
GLY
161
HELX_P
A
TYR
231
A
TYR
166
5
7
6
A
LYS
259
A
LYS
194
HELX_P
A
LEU
263
A
LEU
198
5
8
5
A
PRO
264
A
PRO
199
HELX_P
A
LYS
269
A
LYS
204
1
9
6
A
ASN
316
A
ASN
251
HELX_P
A
TYR
321
A
TYR
256
1
10
6
A
ALA
350
A
ALA
285
HELX_P
A
GLY
365
A
GLY
300
1
11
16
A
GLY
402
A
GLY
337
HELX_P
A
PHE
417
A
PHE
352
1
12
16
A
THR
430
A
THR
365
HELX_P
A
TYR
438
A
TYR
373
1
13
9
A
ARG
440
A
ARG
375
HELX_P
A
ASP
452
A
ASP
387
1
14
13
A
SER
459
A
SER
394
HELX_P
A
LEU
465
A
LEU
400
1
15
7
OXIDOREDUCTASE
vao superfamily, OXIDOREDUCTASE
A
PRO
244
A
PRO
179
1
A
PRO
245
A
PRO
180
5.91
A
SER
427
A
SER
362
1
A
ARG
428
A
ARG
363
3.63
A0R607_MYCS2
UNP
1
66
A0R607
SYGDNAQNGGGLVIDMPALNRIHSIDSGTRLVDVDAGVSLDQLMKAALPHGLWVPVLPGTRQVTVGGAIGCDIHGKNHHS
AGSFGNHVRSMELLTANGEVRHLTPAGPDSDLFWATVGGNGLTGIILRATIEMTPTETAYFIADGDVTGSLDETIAFHSD
GSEANYTYSSAWFDAISKPPKLGRAAISRGSLAKLDQLPSKLQKDPLKFDAPQLLTLPDIFPNGLANKFTFMPIGELWYR
KSGTYRNKVQNLTQFYHPLDMFGEWNRAYGSAGFLQYQFVVPTEAVEEFKSIIVDIQRSGHYSFLNVFKLFGPGNQAPLS
FPIPGWNVCVDFPIKAGLHEFVTELDRRVLEFGGRLYTAKDSRTTAETFHAMYPRIDEWIRIRRSVDPDGVFASDMARRL
QLL
66
468
4G3T
66
468
A0R607
A
1
1
403
5
2
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
87
A
ILE
22
A
ASP
91
A
ASP
26
A
LEU
96
A
LEU
31
A
ASP
100
A
ASP
35
A
ILE
190
A
ILE
125
A
GLU
197
A
GLU
132
A
VAL
153
A
VAL
88
A
LEU
159
A
LEU
94
A
VAL
165
A
VAL
100
A
LEU
168
A
LEU
103
A
LEU
117
A
LEU
52
A
TRP
118
A
TRP
53
A
THR
199
A
THR
134
A
PRO
200
A
PRO
135
A
TYR
310
A
TYR
245
A
GLN
315
A
GLN
250
A
PHE
206
A
PHE
141
A
VAL
212
A
VAL
147
A
ALA
250
A
ALA
185
A
LEU
257
A
LEU
192
A
TYR
233
A
TYR
168
A
PHE
238
A
PHE
173
A
ASN
371
A
ASN
306
A
PHE
376
A
PHE
311
A
GLY
390
A
GLY
325
A
PRO
398
A
PRO
333
A
PHE
339
A
PHE
274
A
PRO
347
A
PRO
282
A
ARG
420
A
ARG
355
A
LEU
421
A
LEU
356
154
P 32 2 1