0.007763
0.000000
0.002916
0.000000
0.022460
0.000000
0.000000
0.000000
0.020929
0.00000
0.00000
0.00000
Martynnowski, D.
Grochulski, P.
Howard, S.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
110.59
90.00
128.821
44.523
51.040
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
69
142
149
10.1107/S0907444912042710
23385451
Structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
87
1
CCD
2012-01-28
RAYONIX MX-300
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
0.9793
1.0
08ID-1
CLSI
0.9793
SYNCHROTRON
CLSI BEAMLINE 08ID-1
29867.020
General Secretion Pathway Protein
1
nat
polymer
18.015
water
253
nat
water
no
no
MHHHHHHVPAILVNDEQWLGESAVARMTTRAQGLEELYKLWGYRATRIDTMCEQPSTSIFQCQVRQLNWQELQQTPHPLL
LTLQHEGQRAYVVLLEVDPERVVLLTGEQRLTFTVSQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIEVLDQLLAKALND
EPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRALTQAEKQGEEQVMRYPEFPSLAPLLRTYP
LAETGDVINVADQTSPTL
MHHHHHHVPAILVNDEQWLGESAVARMTTRAQGLEELYKLWGYRATRIDTMCEQPSTSIFQCQVRQLNWQELQQTPHPLL
LTLQHEGQRAYVVLLEVDPERVVLLTGEQRLTFTVSQLMSLWRGEVTDLWPMPLRETLRLGMHGEAIEVLDQLLAKALND
EPLKTTQFNAELMQRVEWFQRWQAMTEDGIAGQRTLARLQHMVSLSEPWRALTQAEKQGEEQVMRYPEFPSLAPLLRTYP
LAETGDVINVADQTSPTL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
672
Vibrio vulnificus
1
2.29
46.38
VAPOR DIFFUSION, HANGING DROP
8.0
220 mM Calcium Chloride, 20% PEG3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
repository
Initial release
Database references
1
0
2013-01-30
1
1
2013-03-27
RCSB
Y
RCSB
2012-07-17
REL
REL
HOH
water
HOH
1
2
HOH
HOH
601
A
HOH
2
2
HOH
HOH
602
A
HOH
3
2
HOH
HOH
603
A
HOH
4
2
HOH
HOH
604
A
HOH
5
2
HOH
HOH
605
A
HOH
6
2
HOH
HOH
606
A
HOH
7
2
HOH
HOH
607
A
HOH
8
2
HOH
HOH
608
A
HOH
9
2
HOH
HOH
609
A
HOH
10
2
HOH
HOH
610
A
HOH
12
2
HOH
HOH
611
A
HOH
13
2
HOH
HOH
612
A
HOH
14
2
HOH
HOH
613
A
HOH
15
2
HOH
HOH
614
A
HOH
16
2
HOH
HOH
615
A
HOH
17
2
HOH
HOH
616
A
HOH
18
2
HOH
HOH
617
A
HOH
19
2
HOH
HOH
618
A
HOH
20
2
HOH
HOH
619
A
HOH
21
2
HOH
HOH
620
A
HOH
22
2
HOH
HOH
621
A
HOH
23
2
HOH
HOH
622
A
HOH
24
2
HOH
HOH
623
A
HOH
25
2
HOH
HOH
624
A
HOH
26
2
HOH
HOH
625
A
HOH
27
2
HOH
HOH
626
A
HOH
28
2
HOH
HOH
627
A
HOH
29
2
HOH
HOH
628
A
HOH
30
2
HOH
HOH
629
A
HOH
31
2
HOH
HOH
630
A
HOH
32
2
HOH
HOH
631
A
HOH
33
2
HOH
HOH
632
A
HOH
34
2
HOH
HOH
633
A
HOH
35
2
HOH
HOH
634
A
HOH
36
2
HOH
HOH
635
A
HOH
37
2
HOH
HOH
636
A
HOH
38
2
HOH
HOH
637
A
HOH
39
2
HOH
HOH
638
A
HOH
40
2
HOH
HOH
639
A
HOH
41
2
HOH
HOH
640
A
HOH
42
2
HOH
HOH
641
A
HOH
43
2
HOH
HOH
642
A
HOH
44
2
HOH
HOH
643
A
HOH
45
2
HOH
HOH
644
A
HOH
46
2
HOH
HOH
645
A
HOH
47
2
HOH
HOH
646
A
HOH
48
2
HOH
HOH
647
A
HOH
49
2
HOH
HOH
648
A
HOH
50
2
HOH
HOH
649
A
HOH
51
2
HOH
HOH
650
A
HOH
52
2
HOH
HOH
651
A
HOH
53
2
HOH
HOH
652
A
HOH
54
2
HOH
HOH
653
A
HOH
55
2
HOH
HOH
654
A
HOH
56
2
HOH
HOH
655
A
HOH
57
2
HOH
HOH
656
A
HOH
58
2
HOH
HOH
657
A
HOH
59
2
HOH
HOH
658
A
HOH
60
2
HOH
HOH
659
A
HOH
61
2
HOH
HOH
660
A
HOH
62
2
HOH
HOH
661
A
HOH
63
2
HOH
HOH
662
A
HOH
64
2
HOH
HOH
663
A
HOH
65
2
HOH
HOH
664
A
HOH
66
2
HOH
HOH
665
A
HOH
67
2
HOH
HOH
666
A
HOH
68
2
HOH
HOH
667
A
HOH
69
2
HOH
HOH
668
A
HOH
70
2
HOH
HOH
669
A
HOH
71
2
HOH
HOH
670
A
HOH
72
2
HOH
HOH
671
A
HOH
73
2
HOH
HOH
672
A
HOH
74
2
HOH
HOH
673
A
HOH
75
2
HOH
HOH
674
A
HOH
76
2
HOH
HOH
675
A
HOH
77
2
HOH
HOH
676
A
HOH
78
2
HOH
HOH
677
A
HOH
79
2
HOH
HOH
678
A
HOH
80
2
HOH
HOH
679
A
HOH
81
2
HOH
HOH
680
A
HOH
82
2
HOH
HOH
681
A
HOH
83
2
HOH
HOH
682
A
HOH
84
2
HOH
HOH
683
A
HOH
85
2
HOH
HOH
684
A
HOH
86
2
HOH
HOH
685
A
HOH
87
2
HOH
HOH
686
A
HOH
88
2
HOH
HOH
687
A
HOH
89
2
HOH
HOH
688
A
HOH
90
2
HOH
HOH
689
A
HOH
91
2
HOH
HOH
690
A
HOH
92
2
HOH
HOH
691
A
HOH
93
2
HOH
HOH
692
A
HOH
94
2
HOH
HOH
693
A
HOH
95
2
HOH
HOH
694
A
HOH
96
2
HOH
HOH
695
A
HOH
97
2
HOH
HOH
696
A
HOH
98
2
HOH
HOH
697
A
HOH
99
2
HOH
HOH
698
A
HOH
100
2
HOH
HOH
699
A
HOH
101
2
HOH
HOH
700
A
HOH
102
2
HOH
HOH
701
A
HOH
103
2
HOH
HOH
702
A
HOH
104
2
HOH
HOH
703
A
HOH
105
2
HOH
HOH
704
A
HOH
106
2
HOH
HOH
705
A
HOH
107
2
HOH
HOH
706
A
HOH
108
2
HOH
HOH
707
A
HOH
109
2
HOH
HOH
708
A
HOH
110
2
HOH
HOH
709
A
HOH
111
2
HOH
HOH
710
A
HOH
112
2
HOH
HOH
711
A
HOH
113
2
HOH
HOH
712
A
HOH
114
2
HOH
HOH
713
A
HOH
115
2
HOH
HOH
714
A
HOH
116
2
HOH
HOH
715
A
HOH
117
2
HOH
HOH
716
A
HOH
118
2
HOH
HOH
717
A
HOH
119
2
HOH
HOH
718
A
HOH
120
2
HOH
HOH
719
A
HOH
121
2
HOH
HOH
720
A
HOH
122
2
HOH
HOH
721
A
HOH
123
2
HOH
HOH
722
A
HOH
124
2
HOH
HOH
723
A
HOH
125
2
HOH
HOH
724
A
HOH
126
2
HOH
HOH
725
A
HOH
127
2
HOH
HOH
726
A
HOH
128
2
HOH
HOH
727
A
HOH
129
2
HOH
HOH
728
A
HOH
130
2
HOH
HOH
729
A
HOH
131
2
HOH
HOH
730
A
HOH
132
2
HOH
HOH
731
A
HOH
133
2
HOH
HOH
732
A
HOH
134
2
HOH
HOH
733
A
HOH
135
2
HOH
HOH
734
A
HOH
136
2
HOH
HOH
735
A
HOH
137
2
HOH
HOH
736
A
HOH
138
2
HOH
HOH
737
A
HOH
139
2
HOH
HOH
738
A
HOH
140
2
HOH
HOH
739
A
HOH
141
2
HOH
HOH
740
A
HOH
142
2
HOH
HOH
741
A
HOH
143
2
HOH
HOH
742
A
HOH
144
2
HOH
HOH
743
A
HOH
145
2
HOH
HOH
744
A
HOH
146
2
HOH
HOH
745
A
HOH
147
2
HOH
HOH
746
A
HOH
148
2
HOH
HOH
747
A
HOH
150
2
HOH
HOH
748
A
HOH
151
2
HOH
HOH
749
A
HOH
152
2
HOH
HOH
750
A
HOH
153
2
HOH
HOH
751
A
HOH
154
2
HOH
HOH
752
A
HOH
155
2
HOH
HOH
753
A
HOH
156
2
HOH
HOH
754
A
HOH
157
2
HOH
HOH
755
A
HOH
158
2
HOH
HOH
756
A
HOH
159
2
HOH
HOH
757
A
HOH
160
2
HOH
HOH
758
A
HOH
161
2
HOH
HOH
759
A
HOH
162
2
HOH
HOH
760
A
HOH
163
2
HOH
HOH
761
A
HOH
164
2
HOH
HOH
762
A
HOH
165
2
HOH
HOH
763
A
HOH
166
2
HOH
HOH
764
A
HOH
167
2
HOH
HOH
765
A
HOH
168
2
HOH
HOH
766
A
HOH
169
2
HOH
HOH
767
A
HOH
170
2
HOH
HOH
768
A
HOH
171
2
HOH
HOH
769
A
HOH
172
2
HOH
HOH
770
A
HOH
173
2
HOH
HOH
771
A
HOH
174
2
HOH
HOH
772
A
HOH
175
2
HOH
HOH
773
A
HOH
176
2
HOH
HOH
774
A
HOH
177
2
HOH
HOH
775
A
HOH
178
2
HOH
HOH
776
A
HOH
179
2
HOH
HOH
777
A
HOH
180
2
HOH
HOH
778
A
HOH
182
2
HOH
HOH
779
A
HOH
183
2
HOH
HOH
780
A
HOH
184
2
HOH
HOH
781
A
HOH
185
2
HOH
HOH
782
A
HOH
186
2
HOH
HOH
783
A
HOH
187
2
HOH
HOH
784
A
HOH
188
2
HOH
HOH
785
A
HOH
189
2
HOH
HOH
786
A
HOH
190
2
HOH
HOH
787
A
HOH
191
2
HOH
HOH
788
A
HOH
192
2
HOH
HOH
789
A
HOH
193
2
HOH
HOH
790
A
HOH
194
2
HOH
HOH
791
A
HOH
195
2
HOH
HOH
792
A
HOH
196
2
HOH
HOH
793
A
HOH
197
2
HOH
HOH
794
A
HOH
198
2
HOH
HOH
795
A
HOH
199
2
HOH
HOH
796
A
HOH
200
2
HOH
HOH
797
A
HOH
201
2
HOH
HOH
798
A
HOH
202
2
HOH
HOH
799
A
HOH
203
2
HOH
HOH
800
A
HOH
204
2
HOH
HOH
801
A
HOH
205
2
HOH
HOH
802
A
HOH
206
2
HOH
HOH
803
A
HOH
207
2
HOH
HOH
804
A
HOH
208
2
HOH
HOH
805
A
HOH
209
2
HOH
HOH
806
A
HOH
210
2
HOH
HOH
807
A
HOH
211
2
HOH
HOH
808
A
HOH
212
2
HOH
HOH
809
A
HOH
213
2
HOH
HOH
810
A
HOH
215
2
HOH
HOH
811
A
HOH
216
2
HOH
HOH
812
A
HOH
217
2
HOH
HOH
813
A
HOH
218
2
HOH
HOH
814
A
HOH
219
2
HOH
HOH
815
A
HOH
220
2
HOH
HOH
816
A
HOH
221
2
HOH
HOH
817
A
HOH
222
2
HOH
HOH
818
A
HOH
223
2
HOH
HOH
819
A
HOH
224
2
HOH
HOH
820
A
HOH
225
2
HOH
HOH
821
A
HOH
226
2
HOH
HOH
822
A
HOH
227
2
HOH
HOH
823
A
HOH
228
2
HOH
HOH
824
A
HOH
229
2
HOH
HOH
825
A
HOH
230
2
HOH
HOH
826
A
HOH
231
2
HOH
HOH
827
A
HOH
232
2
HOH
HOH
828
A
HOH
234
2
HOH
HOH
829
A
HOH
235
2
HOH
HOH
830
A
HOH
236
2
HOH
HOH
831
A
HOH
237
2
HOH
HOH
832
A
HOH
238
2
HOH
HOH
833
A
HOH
239
2
HOH
HOH
834
A
HOH
240
2
HOH
HOH
835
A
HOH
241
2
HOH
HOH
836
A
HOH
242
2
HOH
HOH
837
A
HOH
243
2
HOH
HOH
838
A
HOH
244
2
HOH
HOH
839
A
HOH
245
2
HOH
HOH
840
A
HOH
246
2
HOH
HOH
841
A
HOH
247
2
HOH
HOH
842
A
HOH
248
2
HOH
HOH
843
A
HOH
249
2
HOH
HOH
844
A
HOH
250
2
HOH
HOH
845
A
HOH
252
2
HOH
HOH
846
A
HOH
253
2
HOH
HOH
847
A
HOH
254
2
HOH
HOH
848
A
HOH
255
2
HOH
HOH
849
A
HOH
256
2
HOH
HOH
850
A
HOH
257
2
HOH
HOH
851
A
HOH
258
2
HOH
HOH
852
A
HOH
259
2
HOH
HOH
853
A
n
1
326
A
n
2
327
A
n
3
328
A
n
4
329
A
n
5
330
A
n
6
331
A
n
7
332
A
n
8
333
A
n
9
334
A
n
10
335
A
n
11
336
A
n
12
337
A
n
13
338
A
n
14
339
A
n
15
340
A
n
16
341
A
n
17
342
A
TRP
343
n
18
TRP
343
A
LEU
344
n
19
LEU
344
A
GLY
345
n
20
GLY
345
A
GLU
346
n
21
GLU
346
A
SER
347
n
22
SER
347
A
ALA
348
n
23
ALA
348
A
VAL
349
n
24
VAL
349
A
ALA
350
n
25
ALA
350
A
ARG
351
n
26
ARG
351
A
MET
352
n
27
MET
352
A
THR
353
n
28
THR
353
A
THR
354
n
29
THR
354
A
ARG
355
n
30
ARG
355
A
ALA
356
n
31
ALA
356
A
GLN
357
n
32
GLN
357
A
GLY
358
n
33
GLY
358
A
LEU
359
n
34
LEU
359
A
GLU
360
n
35
GLU
360
A
GLU
361
n
36
GLU
361
A
LEU
362
n
37
LEU
362
A
TYR
363
n
38
TYR
363
A
LYS
364
n
39
LYS
364
A
LEU
365
n
40
LEU
365
A
TRP
366
n
41
TRP
366
A
GLY
367
n
42
GLY
367
A
TYR
368
n
43
TYR
368
A
ARG
369
n
44
ARG
369
A
ALA
370
n
45
ALA
370
A
THR
371
n
46
THR
371
A
ARG
372
n
47
ARG
372
A
ILE
373
n
48
ILE
373
A
ASP
374
n
49
ASP
374
A
THR
375
n
50
THR
375
A
MET
376
n
51
MET
376
A
CYS
377
n
52
CYS
377
A
GLU
378
n
53
GLU
378
A
GLN
379
n
54
GLN
379
A
PRO
380
n
55
PRO
380
A
SER
381
n
56
SER
381
A
THR
382
n
57
THR
382
A
SER
383
n
58
SER
383
A
ILE
384
n
59
ILE
384
A
PHE
385
n
60
PHE
385
A
GLN
386
n
61
GLN
386
A
CYS
387
n
62
CYS
387
A
GLN
388
n
63
GLN
388
A
VAL
389
n
64
VAL
389
A
ARG
390
n
65
ARG
390
A
GLN
391
n
66
GLN
391
A
LEU
392
n
67
LEU
392
A
ASN
393
n
68
ASN
393
A
TRP
394
n
69
TRP
394
A
GLN
395
n
70
GLN
395
A
GLU
396
n
71
GLU
396
A
LEU
397
n
72
LEU
397
A
GLN
398
n
73
GLN
398
A
GLN
399
n
74
GLN
399
A
THR
400
n
75
THR
400
A
PRO
401
n
76
PRO
401
A
HIS
402
n
77
HIS
402
A
PRO
403
n
78
PRO
403
A
LEU
404
n
79
LEU
404
A
LEU
405
n
80
LEU
405
A
LEU
406
n
81
LEU
406
A
THR
407
n
82
THR
407
A
LEU
408
n
83
LEU
408
A
GLN
409
n
84
GLN
409
A
HIS
410
n
85
HIS
410
A
GLU
411
n
86
GLU
411
A
GLY
412
n
87
GLY
412
A
GLN
413
n
88
GLN
413
A
ARG
414
n
89
ARG
414
A
ALA
415
n
90
ALA
415
A
TYR
416
n
91
TYR
416
A
VAL
417
n
92
VAL
417
A
VAL
418
n
93
VAL
418
A
LEU
419
n
94
LEU
419
A
LEU
420
n
95
LEU
420
A
GLU
421
n
96
GLU
421
A
VAL
422
n
97
VAL
422
A
ASP
423
n
98
ASP
423
A
PRO
424
n
99
PRO
424
A
GLU
425
n
100
GLU
425
A
ARG
426
n
101
ARG
426
A
VAL
427
n
102
VAL
427
A
VAL
428
n
103
VAL
428
A
LEU
429
n
104
LEU
429
A
LEU
430
n
105
LEU
430
A
THR
431
n
106
THR
431
A
GLY
432
n
107
GLY
432
A
GLU
433
n
108
GLU
433
A
GLN
434
n
109
GLN
434
A
ARG
435
n
110
ARG
435
A
LEU
436
n
111
LEU
436
A
THR
437
n
112
THR
437
A
PHE
438
n
113
PHE
438
A
THR
439
n
114
THR
439
A
VAL
440
n
115
VAL
440
A
SER
441
n
116
SER
441
A
GLN
442
n
117
GLN
442
A
LEU
443
n
118
LEU
443
A
MET
444
n
119
MET
444
A
SER
445
n
120
SER
445
A
LEU
446
n
121
LEU
446
A
TRP
447
n
122
TRP
447
A
ARG
448
n
123
ARG
448
A
GLY
449
n
124
GLY
449
A
GLU
450
n
125
GLU
450
A
VAL
451
n
126
VAL
451
A
THR
452
n
127
THR
452
A
ASP
453
n
128
ASP
453
A
LEU
454
n
129
LEU
454
A
TRP
455
n
130
TRP
455
A
PRO
456
n
131
PRO
456
A
MET
457
n
132
MET
457
A
PRO
458
n
133
PRO
458
A
LEU
459
n
134
LEU
459
A
ARG
460
n
135
ARG
460
A
GLU
461
n
136
GLU
461
A
THR
462
n
137
THR
462
A
LEU
463
n
138
LEU
463
A
ARG
464
n
139
ARG
464
A
LEU
465
n
140
LEU
465
A
GLY
466
n
141
GLY
466
A
MET
467
n
142
MET
467
A
HIS
468
n
143
HIS
468
A
GLY
469
n
144
GLY
469
A
GLU
470
n
145
GLU
470
A
ALA
471
n
146
ALA
471
A
ILE
472
n
147
ILE
472
A
GLU
473
n
148
GLU
473
A
VAL
474
n
149
VAL
474
A
LEU
475
n
150
LEU
475
A
ASP
476
n
151
ASP
476
A
GLN
477
n
152
GLN
477
A
LEU
478
n
153
LEU
478
A
LEU
479
n
154
LEU
479
A
ALA
480
n
155
ALA
480
A
LYS
481
n
156
LYS
481
A
ALA
482
n
157
ALA
482
A
LEU
483
n
158
LEU
483
A
ASN
484
n
159
ASN
484
A
ASP
485
n
160
ASP
485
A
GLU
486
n
161
GLU
486
A
PRO
487
n
162
PRO
487
A
LEU
488
n
163
LEU
488
A
LYS
489
n
164
LYS
489
A
THR
490
n
165
THR
490
A
THR
491
n
166
THR
491
A
GLN
492
n
167
GLN
492
A
PHE
493
n
168
PHE
493
A
ASN
494
n
169
ASN
494
A
ALA
495
n
170
ALA
495
A
GLU
496
n
171
GLU
496
A
LEU
497
n
172
LEU
497
A
MET
498
n
173
MET
498
A
GLN
499
n
174
GLN
499
A
ARG
500
n
175
ARG
500
A
VAL
501
n
176
VAL
501
A
GLU
502
n
177
GLU
502
A
TRP
503
n
178
TRP
503
A
PHE
504
n
179
PHE
504
A
GLN
505
n
180
GLN
505
A
ARG
506
n
181
ARG
506
A
TRP
507
n
182
TRP
507
A
GLN
508
n
183
GLN
508
A
ALA
509
n
184
ALA
509
A
MET
510
n
185
MET
510
A
THR
511
n
186
THR
511
A
GLU
512
n
187
GLU
512
A
ASP
513
n
188
ASP
513
A
GLY
514
n
189
GLY
514
A
ILE
515
n
190
ILE
515
A
ALA
516
n
191
ALA
516
A
GLY
517
n
192
GLY
517
A
GLN
518
n
193
GLN
518
A
ARG
519
n
194
ARG
519
A
THR
520
n
195
THR
520
A
LEU
521
n
196
LEU
521
A
ALA
522
n
197
ALA
522
A
ARG
523
n
198
ARG
523
A
LEU
524
n
199
LEU
524
A
GLN
525
n
200
GLN
525
A
HIS
526
n
201
HIS
526
A
MET
527
n
202
MET
527
A
VAL
528
n
203
VAL
528
A
SER
529
n
204
SER
529
A
LEU
530
n
205
LEU
530
A
SER
531
n
206
SER
531
A
GLU
532
n
207
GLU
532
A
PRO
533
n
208
PRO
533
A
TRP
534
n
209
TRP
534
A
ARG
535
n
210
ARG
535
A
ALA
536
n
211
ALA
536
A
LEU
537
n
212
LEU
537
A
THR
538
n
213
THR
538
A
GLN
539
n
214
GLN
539
A
n
215
541
A
n
216
542
A
n
217
543
A
n
218
544
A
n
219
545
A
GLU
546
n
220
GLU
546
A
GLU
547
n
221
GLU
547
A
GLN
548
n
222
GLN
548
A
VAL
549
n
223
VAL
549
A
MET
550
n
224
MET
550
A
ARG
551
n
225
ARG
551
A
TYR
552
n
226
TYR
552
A
PRO
553
n
227
PRO
553
A
GLU
554
n
228
GLU
554
A
PHE
555
n
229
PHE
555
A
PRO
556
n
230
PRO
556
A
SER
557
n
231
SER
557
A
LEU
558
n
232
LEU
558
A
ALA
559
n
233
ALA
559
A
PRO
560
n
234
PRO
560
A
LEU
561
n
235
LEU
561
A
LEU
562
n
236
LEU
562
A
ARG
563
n
237
ARG
563
A
THR
564
n
238
THR
564
A
TYR
565
n
239
TYR
565
A
PRO
566
n
240
PRO
566
A
LEU
567
n
241
LEU
567
A
ALA
568
n
242
ALA
568
A
GLU
569
n
243
GLU
569
A
THR
570
n
244
THR
570
A
n
245
571
A
n
246
572
A
n
247
573
A
n
248
574
A
n
249
575
A
n
250
576
A
n
251
577
A
n
252
578
A
n
253
579
A
n
254
580
A
n
255
581
A
n
256
582
A
n
257
583
A
n
258
584
A
3.3430
-0.9470
0.8911
1.3955
-0.4607
1.8827
-0.0007
0.2829
-0.1584
-0.1640
-0.0016
-0.0584
0.2036
-0.0078
0.0023
0.1036
-0.0114
0.0210
0.0964
-0.0135
0.0294
refined
21.9531
-8.2065
-4.5674
X-RAY DIFFRACTION
1.9939
-0.5241
0.8679
0.9418
-0.2439
1.1959
-0.0580
-0.1563
-0.0277
0.0137
0.0570
0.0192
0.1234
-0.2031
0.0009
0.0645
-0.0150
0.0080
0.1011
-0.0011
0.0524
refined
16.8816
-3.7789
7.5315
X-RAY DIFFRACTION
5.1408
-1.3682
0.0207
2.2701
0.3629
1.8645
0.0800
0.2318
-0.3478
-0.2087
-0.1072
0.2252
0.1516
-0.2634
0.0272
0.0628
-0.0355
-0.0172
0.1262
-0.0182
0.0565
refined
10.4694
-4.6171
-3.9313
X-RAY DIFFRACTION
2.6869
-0.2197
0.8207
1.5192
-0.2637
1.1023
0.0045
0.2202
0.0490
-0.0879
-0.0042
0.1019
0.0640
-0.1990
-0.0003
0.0333
-0.0180
-0.0004
0.1315
0.0002
0.0518
refined
10.3298
-0.8959
-5.3375
X-RAY DIFFRACTION
0.4402
-0.0303
0.1813
1.5220
0.5347
0.8831
-0.0004
0.0102
0.0165
-0.0198
0.0357
-0.0954
-0.0194
0.0388
-0.0353
0.0734
-0.0020
0.0072
0.0473
0.0021
0.0722
refined
27.1718
6.1746
21.3149
X-RAY DIFFRACTION
6.2547
4.4125
-5.1500
3.2931
-4.8785
12.9832
-0.1190
0.4007
1.0055
-0.0979
0.3897
0.6422
-0.0319
-0.7099
-0.2707
0.1005
-0.0690
-0.0008
0.1311
0.0733
0.2772
refined
24.0525
10.4242
-5.6004
X-RAY DIFFRACTION
1.4750
0.0989
2.4385
0.3442
1.0565
6.5165
-0.1331
0.1959
0.2188
0.0276
0.1054
-0.1441
-0.0457
0.5255
0.0277
0.0709
-0.0276
0.0211
0.1132
0.0032
0.1942
refined
33.2678
-1.2040
3.0357
X-RAY DIFFRACTION
A
343
A
377
X-RAY DIFFRACTION
1
A
378
A
404
X-RAY DIFFRACTION
2
A
405
A
425
X-RAY DIFFRACTION
3
A
426
A
453
X-RAY DIFFRACTION
4
A
454
A
531
X-RAY DIFFRACTION
5
A
532
A
550
X-RAY DIFFRACTION
6
A
551
A
570
X-RAY DIFFRACTION
7
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
369
A
N
ARG
44
A
O
ALA
559
A
O
ALA
233
A
N
GLN
388
A
N
GLN
63
A
O
ASP
453
A
O
ASP
128
A
O
THR
452
A
O
THR
127
A
N
LEU
405
A
N
LEU
80
A
N
LEU
404
A
N
LEU
79
A
O
LEU
419
A
O
LEU
94
A
N
LEU
420
A
N
LEU
95
A
O
VAL
428
A
O
VAL
103
A
N
LEU
429
A
N
LEU
104
A
O
LEU
436
A
O
LEU
111
1
A
MET
326
A
MET
1
1
Y
1
A
HIS
327
A
HIS
2
1
Y
1
A
HIS
328
A
HIS
3
1
Y
1
A
HIS
329
A
HIS
4
1
Y
1
A
HIS
330
A
HIS
5
1
Y
1
A
HIS
331
A
HIS
6
1
Y
1
A
HIS
332
A
HIS
7
1
Y
1
A
VAL
333
A
VAL
8
1
Y
1
A
PRO
334
A
PRO
9
1
Y
1
A
ALA
335
A
ALA
10
1
Y
1
A
ILE
336
A
ILE
11
1
Y
1
A
LEU
337
A
LEU
12
1
Y
1
A
VAL
338
A
VAL
13
1
Y
1
A
ASN
339
A
ASN
14
1
Y
1
A
ASP
340
A
ASP
15
1
Y
1
A
GLU
341
A
GLU
16
1
Y
1
A
GLN
342
A
GLN
17
1
Y
1
A
ALA
541
A
ALA
215
1
Y
1
A
GLU
542
A
GLU
216
1
Y
1
A
LYS
543
A
LYS
217
1
Y
1
A
GLN
544
A
GLN
218
1
Y
1
A
GLY
545
A
GLY
219
1
Y
1
A
GLY
571
A
GLY
245
1
Y
1
A
ASP
572
A
ASP
246
1
Y
1
A
VAL
573
A
VAL
247
1
Y
1
A
ILE
574
A
ILE
248
1
Y
1
A
ASN
575
A
ASN
249
1
Y
1
A
VAL
576
A
VAL
250
1
Y
1
A
ALA
577
A
ALA
251
1
Y
1
A
ASP
578
A
ASP
252
1
Y
1
A
GLN
579
A
GLN
253
1
Y
1
A
THR
580
A
THR
254
1
Y
1
A
SER
581
A
SER
255
1
Y
1
A
PRO
582
A
PRO
256
1
Y
1
A
THR
583
A
THR
257
1
Y
1
A
LEU
584
A
LEU
258
1
Y
1
3.70
0.50
120.30
124.00
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
435
435
435
A
A
A
N
1
-3.60
0.50
120.30
116.70
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
435
435
435
A
A
A
N
1
3.92
0.50
120.30
124.22
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
500
500
500
N
1
-4.08
0.50
120.30
116.22
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
500
500
500
N
1
-14.57
1.70
111.00
96.43
A
A
A
CB
CG
CD2
LEU
LEU
LEU
562
562
562
N
1
A
A
CD1
CE1
TYR
TYR
363
363
0.098
0.015
1.389
1.487
N
1
A
A
CZ
CE2
PHE
PHE
504
504
0.123
0.019
1.369
1.492
N
1
A
A
SD
CE
MET
MET
510
510
-0.346
0.056
1.774
1.428
N
1
A
LEU
344
52.50
-124.57
1
A
GLU
346
-115.58
73.38
1
A
GLU
411
33.30
63.91
1
A
GLU
433
-133.18
-33.60
1
A
ASP
485
-143.38
-155.54
1
A
GLU
547
-120.64
-164.28
27.642
-0.03
0.00
-0.02
-0.01
0.00
0.02
0.969
0.958
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.20223
0.17470
0.17615
1.55
47.78
1851
36885
35030
5.0
93.19
3.034
0.050
RANDOM
1
THROUGHOUT
SAD
0.079
0.080
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
MASK
1.55
47.78
253
2071
0
0
1818
0.027
0.022
1870
2.307
1.962
2542
6.512
5.000
220
37.732
23.404
94
16.519
15.000
334
20.375
15.000
20
0.182
0.200
284
0.013
0.021
1415
1.410
1.500
1111
2.472
2.000
1800
4.020
3.000
759
6.610
4.500
742
0.406
0.342
1.590
83
1540
20
55.83
1.55
50
4G54
35030
36885
1.4
2
0.056
1
3.5
93
1.55
1.59
1
93.2
data collection
MsDC
model building
PHENIX
refinement
REFMAC
5.5.0109
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
General Secretion Pathway Protein
Crystal structure of a periplasmic domain of the EpsAB fusion protein of the Vibrio vulnificus type II secretion system
1
N
N
2
N
N
A
GLU
346
A
GLU
21
HELX_P
A
ARG
351
A
ARG
26
5
1
6
A
THR
354
A
THR
29
HELX_P
A
TRP
366
A
TRP
41
1
2
13
A
ILE
373
A
ILE
48
HELX_P
A
CYS
377
A
CYS
52
5
3
5
A
ASN
393
A
ASN
68
HELX_P
A
GLN
399
A
GLN
74
1
4
7
A
VAL
440
A
VAL
115
HELX_P
A
LEU
446
A
LEU
121
1
5
7
A
GLY
469
A
GLY
144
HELX_P
A
ASN
484
A
ASN
159
1
6
16
A
ASN
494
A
ASN
169
HELX_P
A
GLN
508
A
GLN
183
1
7
15
A
GLY
517
A
GLY
192
HELX_P
A
VAL
528
A
VAL
203
1
8
12
A
GLU
532
A
GLU
207
HELX_P
A
THR
538
A
THR
213
5
9
7
disulf
2.135
A
CYS
377
A
SG
CYS
52
1_555
A
CYS
387
A
SG
CYS
62
1_555
Peptidoglycan-binding protein
Type 2 Secretion System protein, Peptidoglycan-binding protein
A
GLN
379
A
GLN
54
1
A
PRO
380
A
PRO
55
2.48
A
GLU
546
A
GLU
220
1
A
GLU
547
A
GLU
221
10.54
A
TYR
552
A
TYR
226
1
A
PRO
553
A
PRO
227
13.00
4G54
PDB
1
4G54
326
584
4G54
326
584
4G54
A
1
1
258
2
6
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
368
A
TYR
43
A
ARG
369
A
ARG
44
A
ALA
559
A
ALA
233
A
PRO
560
A
PRO
234
A
PHE
385
A
PHE
60
A
GLN
391
A
GLN
66
A
TRP
447
A
TRP
122
A
PRO
456
A
PRO
131
A
LEU
404
A
LEU
79
A
HIS
410
A
HIS
85
A
GLN
413
A
GLN
88
A
VAL
422
A
VAL
97
A
ARG
426
A
ARG
101
A
LEU
430
A
LEU
105
A
ARG
435
A
ARG
110
A
THR
439
A
THR
114
5
C 1 2 1