0.036888
0.000000
0.000000
0.000000
0.019537
0.000000
0.000000
0.000000
0.013936
0.00000
0.00000
0.00000
Slep, K.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
27.109
51.184
71.756
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
doub
N
324
N
sing
Y
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
US
Plos One
1932-6203
7
e50097
e50097
10.1371/journal.pone.0050097
23185543
Structure of the Human Discs Large 1 PDZ2- Adenomatous Polyposis Coli Cytoskeletal Polarity Complex: Insight into Peptide Engagement and PDZ Clustering.
2012
10.2210/pdb4g69/pdb
pdb_00004g69
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2007-03-08
ADSC QUANTUM 210
collected at 1.127 A
SINGLE WAVELENGTH
M
x-ray
1
1.127
1.0
8.3.1
ALS
1.127
SYNCHROTRON
ALS BEAMLINE 8.3.1
10600.230
Disks large homolog 1
PDZ2, UNP residues 310-407
1
man
polymer
1207.338
Adenomatous polyposis coli protein
APC C-terminal peptide, UNP residues 2833-2843
1
syn
polymer
18.015
water
106
nat
water
Synapse-associated protein 97, SAP-97, SAP97, hDlg
Protein APC, Deleted in polyposis 2.5
no
no
GSRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEA
VTALKNTSDFVYLKVAKPTS
GSRKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEA
VTALKNTSDFVYLKVAKPTS
A
polypeptide(L)
no
no
RHSGSYLVTSV
RHSGSYLVTSV
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
GST N-terminal fusion, GST cleaved via Thrombin treatment
sample
DLG1
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3) pLysS
plasmid
pGEX-2T
1
2.11
41.65
VAPOR DIFFUSION, HANGING DROP
6.25
Protein solution: 1.4 mM Dlg1 PDZ2, 1.7 mM APC, 100 mM NaCl, 25 mM Tris pH 7.0, 0.1% B-ME
Well: 200 mM sodium acetate, 100 mM sodium cacodylate pH 6.25, 28% PEG 8000
Drop = 1:1 protein:well solution , VAPOR DIFFUSION, HANGING DROP, temperature 300K
300
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Refinement description
Data collection
Database references
Refinement description
1
0
2012-12-12
1
1
2017-11-15
1
2
2023-09-13
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2012-07-18
REL
REL
HOH
water
Adenomatous Polyposis Coli (APC) C-terminal 11 residues synthesized with N-terminal Tetramethyl rhodamine tag
9606
human
Homo sapiens
sample
2FE5
PDB entry 2FE5
PDB
experimental model
HOH
1
3
HOH
HOH
501
A
HOH
2
3
HOH
HOH
502
A
HOH
3
3
HOH
HOH
503
A
HOH
4
3
HOH
HOH
504
A
HOH
5
3
HOH
HOH
505
A
HOH
6
3
HOH
HOH
506
A
HOH
7
3
HOH
HOH
507
A
HOH
8
3
HOH
HOH
508
A
HOH
9
3
HOH
HOH
509
A
HOH
10
3
HOH
HOH
510
A
HOH
11
3
HOH
HOH
511
A
HOH
12
3
HOH
HOH
512
A
HOH
13
3
HOH
HOH
513
A
HOH
14
3
HOH
HOH
514
A
HOH
15
3
HOH
HOH
515
A
HOH
16
3
HOH
HOH
516
A
HOH
17
3
HOH
HOH
517
A
HOH
18
3
HOH
HOH
518
A
HOH
19
3
HOH
HOH
519
A
HOH
20
3
HOH
HOH
520
A
HOH
21
3
HOH
HOH
521
A
HOH
22
3
HOH
HOH
522
A
HOH
23
3
HOH
HOH
523
A
HOH
24
3
HOH
HOH
524
A
HOH
26
3
HOH
HOH
525
A
HOH
27
3
HOH
HOH
526
A
HOH
28
3
HOH
HOH
527
A
HOH
29
3
HOH
HOH
528
A
HOH
30
3
HOH
HOH
529
A
HOH
31
3
HOH
HOH
530
A
HOH
32
3
HOH
HOH
531
A
HOH
33
3
HOH
HOH
532
A
HOH
34
3
HOH
HOH
533
A
HOH
35
3
HOH
HOH
534
A
HOH
36
3
HOH
HOH
535
A
HOH
37
3
HOH
HOH
536
A
HOH
38
3
HOH
HOH
537
A
HOH
39
3
HOH
HOH
538
A
HOH
40
3
HOH
HOH
539
A
HOH
41
3
HOH
HOH
540
A
HOH
42
3
HOH
HOH
541
A
HOH
43
3
HOH
HOH
542
A
HOH
44
3
HOH
HOH
543
A
HOH
45
3
HOH
HOH
544
A
HOH
46
3
HOH
HOH
545
A
HOH
47
3
HOH
HOH
546
A
HOH
48
3
HOH
HOH
547
A
HOH
49
3
HOH
HOH
548
A
HOH
50
3
HOH
HOH
549
A
HOH
51
3
HOH
HOH
550
A
HOH
52
3
HOH
HOH
551
A
HOH
53
3
HOH
HOH
552
A
HOH
54
3
HOH
HOH
553
A
HOH
55
3
HOH
HOH
554
A
HOH
56
3
HOH
HOH
555
A
HOH
57
3
HOH
HOH
556
A
HOH
58
3
HOH
HOH
557
A
HOH
59
3
HOH
HOH
558
A
HOH
60
3
HOH
HOH
559
A
HOH
61
3
HOH
HOH
560
A
HOH
62
3
HOH
HOH
561
A
HOH
63
3
HOH
HOH
562
A
HOH
64
3
HOH
HOH
563
A
HOH
65
3
HOH
HOH
564
A
HOH
66
3
HOH
HOH
565
A
HOH
67
3
HOH
HOH
566
A
HOH
68
3
HOH
HOH
567
A
HOH
69
3
HOH
HOH
568
A
HOH
70
3
HOH
HOH
569
A
HOH
71
3
HOH
HOH
570
A
HOH
72
3
HOH
HOH
571
A
HOH
74
3
HOH
HOH
572
A
HOH
75
3
HOH
HOH
573
A
HOH
77
3
HOH
HOH
574
A
HOH
78
3
HOH
HOH
575
A
HOH
79
3
HOH
HOH
576
A
HOH
80
3
HOH
HOH
577
A
HOH
81
3
HOH
HOH
578
A
HOH
82
3
HOH
HOH
579
A
HOH
83
3
HOH
HOH
580
A
HOH
84
3
HOH
HOH
581
A
HOH
85
3
HOH
HOH
582
A
HOH
86
3
HOH
HOH
583
A
HOH
87
3
HOH
HOH
584
A
HOH
88
3
HOH
HOH
585
A
HOH
89
3
HOH
HOH
586
A
HOH
90
3
HOH
HOH
587
A
HOH
91
3
HOH
HOH
588
A
HOH
92
3
HOH
HOH
589
A
HOH
93
3
HOH
HOH
590
A
HOH
94
3
HOH
HOH
591
A
HOH
95
3
HOH
HOH
592
A
HOH
96
3
HOH
HOH
593
A
HOH
97
3
HOH
HOH
594
A
HOH
98
3
HOH
HOH
595
A
HOH
99
3
HOH
HOH
596
A
HOH
100
3
HOH
HOH
597
A
HOH
101
3
HOH
HOH
598
A
HOH
102
3
HOH
HOH
599
A
HOH
103
3
HOH
HOH
600
A
HOH
104
3
HOH
HOH
601
A
HOH
105
3
HOH
HOH
602
A
HOH
106
3
HOH
HOH
603
A
HOH
25
3
HOH
HOH
2901
B
HOH
73
3
HOH
HOH
2902
B
HOH
76
3
HOH
HOH
2903
B
n
1
308
A
n
2
309
A
ALA
310
n
3
ARG
310
A
LYS
311
n
4
LYS
311
A
PRO
312
n
5
PRO
312
A
VAL
313
n
6
VAL
313
A
SER
314
n
7
SER
314
A
GLU
315
n
8
GLU
315
A
LYS
316
n
9
LYS
316
A
ILE
317
n
10
ILE
317
A
MET
318
n
11
MET
318
A
GLU
319
n
12
GLU
319
A
ILE
320
n
13
ILE
320
A
LYS
321
n
14
LYS
321
A
LEU
322
n
15
LEU
322
A
ILE
323
n
16
ILE
323
A
LYS
324
n
17
LYS
324
A
GLY
325
n
18
GLY
325
A
PRO
326
n
19
PRO
326
A
LYS
327
n
20
LYS
327
A
GLY
328
n
21
GLY
328
A
LEU
329
n
22
LEU
329
A
GLY
330
n
23
GLY
330
A
PHE
331
n
24
PHE
331
A
SER
332
n
25
SER
332
A
ILE
333
n
26
ILE
333
A
ALA
334
n
27
ALA
334
A
GLY
335
n
28
GLY
335
A
GLY
336
n
29
GLY
336
A
VAL
337
n
30
VAL
337
A
GLY
338
n
31
GLY
338
A
ASN
339
n
32
ASN
339
A
GLN
340
n
33
GLN
340
A
HIS
341
n
34
HIS
341
A
ILE
342
n
35
ILE
342
A
PRO
343
n
36
PRO
343
A
GLY
344
n
37
GLY
344
A
ASP
345
n
38
ASP
345
A
ASN
346
n
39
ASN
346
A
SER
347
n
40
SER
347
A
ILE
348
n
41
ILE
348
A
TYR
349
n
42
TYR
349
A
VAL
350
n
43
VAL
350
A
THR
351
n
44
THR
351
A
LYS
352
n
45
LYS
352
A
ILE
353
n
46
ILE
353
A
ILE
354
n
47
ILE
354
A
GLU
355
n
48
GLU
355
A
GLY
356
n
49
GLY
356
A
GLY
357
n
50
GLY
357
A
ALA
358
n
51
ALA
358
A
ALA
359
n
52
ALA
359
A
HIS
360
n
53
HIS
360
A
LYS
361
n
54
LYS
361
A
ASP
362
n
55
ASP
362
A
GLY
363
n
56
GLY
363
A
LYS
364
n
57
LYS
364
A
LEU
365
n
58
LEU
365
A
GLN
366
n
59
GLN
366
A
ILE
367
n
60
ILE
367
A
GLY
368
n
61
GLY
368
A
ASP
369
n
62
ASP
369
A
LYS
370
n
63
LYS
370
A
LEU
371
n
64
LEU
371
A
LEU
372
n
65
LEU
372
A
ALA
373
n
66
ALA
373
A
VAL
374
n
67
VAL
374
A
ASN
375
n
68
ASN
375
A
ASN
376
n
69
ASN
376
A
VAL
377
n
70
VAL
377
A
CYS
378
n
71
CYS
378
A
LEU
379
n
72
LEU
379
A
GLU
380
n
73
GLU
380
A
GLU
381
n
74
GLU
381
A
VAL
382
n
75
VAL
382
A
THR
383
n
76
THR
383
A
HIS
384
n
77
HIS
384
A
GLU
385
n
78
GLU
385
A
GLU
386
n
79
GLU
386
A
ALA
387
n
80
ALA
387
A
VAL
388
n
81
VAL
388
A
THR
389
n
82
THR
389
A
ALA
390
n
83
ALA
390
A
LEU
391
n
84
LEU
391
A
LYS
392
n
85
LYS
392
A
ASN
393
n
86
ASN
393
A
THR
394
n
87
THR
394
A
SER
395
n
88
SER
395
A
ASP
396
n
89
ASP
396
A
PHE
397
n
90
PHE
397
A
VAL
398
n
91
VAL
398
A
TYR
399
n
92
TYR
399
A
LEU
400
n
93
LEU
400
A
LYS
401
n
94
LYS
401
A
VAL
402
n
95
VAL
402
A
ALA
403
n
96
ALA
403
A
LYS
404
n
97
LYS
404
A
PRO
405
n
98
PRO
405
A
THR
406
n
99
THR
406
A
n
100
407
A
n
1
2833
B
n
2
2834
B
n
3
2835
B
n
4
2836
B
n
5
2837
B
TYR
2838
n
6
TYR
2838
B
LEU
2839
n
7
LEU
2839
B
VAL
2840
n
8
VAL
2840
B
THR
2841
n
9
THR
2841
B
SER
2842
n
10
SER
2842
B
VAL
2843
n
11
VAL
2843
B
0.4398
0.0187
0.2044
0.3595
-0.2575
0.2922
0.0080
0.0054
-0.0127
-0.0022
-0.0015
-0.0104
0.0030
-0.0302
0.0062
0.0144
-0.0003
0.0033
0.0142
-0.0293
0.0138
refined
-4.1675
-4.9337
14.8774
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
all
author_and_software_defined_assembly
PISA
2
dimeric
740
-4
6190
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
320
A
N
ILE
13
A
O
LEU
400
A
O
LEU
93
A
O
LYS
401
A
O
LYS
94
A
N
LEU
372
A
N
LEU
65
A
N
VAL
374
A
N
VAL
67
A
O
VAL
377
A
O
VAL
70
A
N
ILE
320
A
N
ILE
13
A
O
LEU
400
A
O
LEU
93
A
O
LYS
401
A
O
LYS
94
A
N
LEU
372
A
N
LEU
65
A
O
LEU
371
A
O
LEU
64
A
N
ILE
348
A
N
ILE
41
A
O
TYR
349
A
O
TYR
42
A
N
ALA
334
A
N
ALA
27
A
N
ILE
333
A
N
ILE
26
B
O
THR
2841
B
O
THR
9
1
A
CG
ARG
310
A
CG
ARG
3
1
Y
1
A
CD
ARG
310
A
CD
ARG
3
1
Y
1
A
NE
ARG
310
A
NE
ARG
3
1
Y
1
A
CZ
ARG
310
A
CZ
ARG
3
1
Y
1
A
NH1
ARG
310
A
NH1
ARG
3
1
Y
1
A
NH2
ARG
310
A
NH2
ARG
3
1
Y
1
A
GLY
308
A
GLY
1
1
Y
1
A
SER
309
A
SER
2
1
Y
1
A
SER
407
A
SER
100
1
Y
1
B
ARG
2833
B
ARG
1
1
Y
1
B
HIS
2834
B
HIS
2
1
Y
1
B
SER
2835
B
SER
3
1
Y
1
B
GLY
2836
B
GLY
4
1
Y
1
B
SER
2837
B
SER
5
1
Y
1
A
A
O
O
HOH
HOH
553
602
2.08
1
A
A
O
O
HOH
HOH
534
560
2.10
1
A
A
O
O
HOH
HOH
558
579
2.12
1
A
ASN
339
-153.33
39.65
1
A
ASN
375
52.29
-116.96
1
A
ASN
393
-90.89
54.81
1
A
SER
395
-92.19
-155.71
-2.8885
0.0000
0.0000
0.3300
-0.0000
2.5586
0.1833
0.1711
0.1723
0.1723
2.0
29.379
688
7000
6846
10.05
95.07
0.17
10%
1
0.10
MOLECULAR REPLACEMENT
15.05
0.90
1.11
PDB entry 2FE5
ML
FLAT BULK SOLVENT MODEL
32.336
0.373
2.0
29.379
106
875
0
0
769
0.007
779
0.980
1051
12.794
288
0.063
127
0.004
132
0.1872
0.1640
2.1519
116
1067
85.00
0.2035
0.1651
2.3683
139
1208
96.00
0.1913
0.1782
2.7108
139
1255
97.00
0.1821
0.1763
3.4146
143
1277
98.00
0.1678
0.1676
29.3823
151
1351
99.00
2
70
4G69
7000
6846
2
2
0.07
1
20.7
4
97.8
2.00
2.07
4.8
590
0.22
1
3
82.9
data collection
Blu-Ice
Ice
model building
PHENIX
refinement
PHENIX
(phenix.refine: 1.6.1_357)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
Structure of the Human Discs Large 1 PDZ2 - Adenomatous Polyposis Coli Cytoskeletal Polarity Complex
1
N
N
2
N
N
3
N
N
3
N
N
A
GLY
357
A
GLY
50
HELX_P
A
GLY
363
A
GLY
56
1
1
7
A
THR
383
A
THR
76
HELX_P
A
ASN
393
A
ASN
86
1
2
11
MEMBRANE PROTEIN/SIGNALING PROTEIN
PDZ, MAGUK, Polarity, Adenomatous Polyposis Coli, Tetramethylrhodamine, Adherens Junction, MEMBRANE PROTEIN-SIGNALING PROTEIN complex
DLG1_HUMAN
UNP
1
310
Q12959
RKPVSEKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVCLEEVTHEEAVT
ALKNTSDFVYLKVAKPTS
APC_HUMAN
UNP
2
2833
P25054
RHSGSYLVTSV
310
407
4G69
310
407
Q12959
A
1
3
100
2833
2843
4G69
2833
2843
P25054
B
2
1
11
1
expression tag
GLY
308
4G69
A
Q12959
UNP
1
1
expression tag
SER
309
4G69
A
Q12959
UNP
2
4
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
315
A
GLU
8
A
ILE
323
A
ILE
16
A
PHE
397
A
PHE
90
A
PRO
405
A
PRO
98
A
LYS
370
A
LYS
63
A
VAL
374
A
VAL
67
A
VAL
377
A
VAL
70
A
CYS
378
A
CYS
71
A
GLU
315
A
GLU
8
A
ILE
323
A
ILE
16
A
PHE
397
A
PHE
90
A
PRO
405
A
PRO
98
A
LYS
370
A
LYS
63
A
VAL
374
A
VAL
67
A
ILE
348
A
ILE
41
A
ILE
353
A
ILE
46
A
PHE
331
A
PHE
24
A
GLY
335
A
GLY
28
B
THR
2841
B
THR
9
B
SER
2842
B
SER
10
19
P 21 21 21