0.026055 0.000000 0.000000 0.000000 0.015450 0.000000 0.000000 0.000000 0.009198 0.00000 0.00000 0.00000 Darst, S.A. Osmundson, J.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 38.381 64.724 108.721 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 151 1005 1016 10.1016/j.cell.2012.10.034 23178120 Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein. 2012 10.2210/pdb4g6d/pdb pdb_00004g6d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 70 1 70 1 CCD 2009-10-19 ADSC QUANTUM 315 CCD ADSC QUANTUM 315 Si(111) SINGLE WAVELENGTH M x-ray 1 0.97949 1.0 0.97918 1.0 24-ID-C APS 0.97949 SYNCHROTRON APS BEAMLINE 24-ID-C 24-ID-C APS 0.97918 SYNCHROTRON APS BEAMLINE 24-ID-C 8731.062 RNA polymerase sigma factor rpoD UNP Residues 296-368 1 man polymer 23226.383 ORF067 1 man polymer 18.015 water 54 nat water no no MKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD MKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD A polypeptide(L) no no MKLKILDKDNATLNVFHRNKEHKTIDNVPTANLVDWYPLSNAYEYKLSRNGEYLELKRLRSTLPSSYGLDDNNQDIIRDN NHRCKIGYWYNPAVRKDNLKIIEKAKQYGLPIITEEYDANTVEQGFRDIGVIFQSLKTIVVTRYLEGKTEEELRIFNMKS EESQLNEALKESDFSVDLTYSDLGQIYNMLLLMKKISK MKLKILDKDNATLNVFHRNKEHKTIDNVPTANLVDWYPLSNAYEYKLSRNGEYLELKRLRSTLPSSYGLDDNNQDIIRDN NHRCKIGYWYNPAVRKDNLKIIEKAKQYGLPIITEEYDANTVEQGFRDIGVIFQSLKTIVVTRYLEGKTEEELRIFNMKS EESQLNEALKESDFSVDLTYSDLGQIYNMLLLMKKISK B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n NCTC 8325 sample rpoD, plaC, sigA, SAOUHSC_01662 93061 Staphylococcus aureus subsp. aureus 562 Escherichia coli sample 292029 Staphylococcus phage G1 562 Escherichia coli 2 2.11 41.78 VAPOR DIFFUSION, SITTING DROP 6.5 0.1M MES pH 6.5, 10% (w/v) PEG5000MME, 12% (v/v) Isopropanol, VAPOR DIFFUSION, SITTING DROP, temperature 295K 295 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif repository Initial release Data collection Database references 1 0 2013-01-23 1 1 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2012-07-18 REL REL HOH water HOH 8 3 HOH HOH 701 A HOH 9 3 HOH HOH 702 A HOH 11 3 HOH HOH 703 A HOH 13 3 HOH HOH 704 A HOH 19 3 HOH HOH 705 A HOH 27 3 HOH HOH 706 A HOH 30 3 HOH HOH 707 A HOH 39 3 HOH HOH 708 A HOH 40 3 HOH HOH 709 A HOH 44 3 HOH HOH 710 A HOH 45 3 HOH HOH 711 A HOH 1 3 HOH HOH 201 B HOH 2 3 HOH HOH 202 B HOH 3 3 HOH HOH 203 B HOH 4 3 HOH HOH 204 B HOH 5 3 HOH HOH 205 B HOH 6 3 HOH HOH 206 B HOH 7 3 HOH HOH 207 B HOH 10 3 HOH HOH 208 B HOH 12 3 HOH HOH 209 B HOH 14 3 HOH HOH 210 B HOH 15 3 HOH HOH 211 B HOH 16 3 HOH HOH 212 B HOH 17 3 HOH HOH 213 B HOH 18 3 HOH HOH 214 B HOH 20 3 HOH HOH 215 B HOH 21 3 HOH HOH 216 B HOH 22 3 HOH HOH 217 B HOH 23 3 HOH HOH 218 B HOH 24 3 HOH HOH 219 B HOH 25 3 HOH HOH 220 B HOH 26 3 HOH HOH 221 B HOH 28 3 HOH HOH 222 B HOH 29 3 HOH HOH 223 B HOH 31 3 HOH HOH 224 B HOH 32 3 HOH HOH 225 B HOH 33 3 HOH HOH 226 B HOH 34 3 HOH HOH 227 B HOH 35 3 HOH HOH 228 B HOH 36 3 HOH HOH 229 B HOH 37 3 HOH HOH 230 B HOH 38 3 HOH HOH 231 B HOH 41 3 HOH HOH 232 B HOH 42 3 HOH HOH 233 B HOH 43 3 HOH HOH 234 B HOH 46 3 HOH HOH 235 B HOH 47 3 HOH HOH 236 B HOH 48 3 HOH HOH 237 B HOH 49 3 HOH HOH 238 B HOH 50 3 HOH HOH 239 B HOH 51 3 HOH HOH 240 B HOH 52 3 HOH HOH 241 B HOH 53 3 HOH HOH 242 B HOH 54 3 HOH HOH 243 B ALA 538 n 1 MET 538 A ALA 539 n 2 LYS 539 A ALA 540 n 3 GLU 540 A ALA 541 n 4 GLN 541 A LEU 542 n 5 LEU 542 A ALA 543 n 6 GLU 543 A ALA 544 n 7 ASP 544 A VAL 545 n 8 VAL 545 A LEU 546 n 9 LEU 546 A ASP 547 n 10 ASP 547 A THR 548 n 11 THR 548 A LEU 549 n 12 LEU 549 A THR 550 n 13 THR 550 A ASP 551 n 14 ASP 551 A ARG 552 n 15 ARG 552 A GLU 553 n 16 GLU 553 A GLU 554 n 17 GLU 554 A ASN 555 n 18 ASN 555 A VAL 556 n 19 VAL 556 A LEU 557 n 20 LEU 557 A ARG 558 n 21 ARG 558 A LEU 559 n 22 LEU 559 A ARG 560 n 23 ARG 560 A PHE 561 n 24 PHE 561 A GLY 562 n 25 GLY 562 A LEU 563 n 26 LEU 563 A ASP 564 n 27 ASP 564 A ASP 565 n 28 ASP 565 A GLY 566 n 29 GLY 566 A ARG 567 n 30 ARG 567 A THR 568 n 31 THR 568 A ARG 569 n 32 ARG 569 A THR 570 n 33 THR 570 A LEU 571 n 34 LEU 571 A GLU 572 n 35 GLU 572 A GLU 573 n 36 GLU 573 A VAL 574 n 37 VAL 574 A GLY 575 n 38 GLY 575 A LYS 576 n 39 LYS 576 A VAL 577 n 40 VAL 577 A PHE 578 n 41 PHE 578 A GLY 579 n 42 GLY 579 A VAL 580 n 43 VAL 580 A THR 581 n 44 THR 581 A ARG 582 n 45 ARG 582 A GLU 583 n 46 GLU 583 A ARG 584 n 47 ARG 584 A ILE 585 n 48 ILE 585 A ARG 586 n 49 ARG 586 A GLN 587 n 50 GLN 587 A ILE 588 n 51 ILE 588 A GLU 589 n 52 GLU 589 A ALA 590 n 53 ALA 590 A LYS 591 n 54 LYS 591 A ALA 592 n 55 ALA 592 A LEU 593 n 56 LEU 593 A ALA 594 n 57 ARG 594 A LYS 595 n 58 LYS 595 A LEU 596 n 59 LEU 596 A ARG 597 n 60 ARG 597 A ALA 598 n 61 HIS 598 A PRO 599 n 62 PRO 599 A n 63 600 A n 64 601 A n 65 602 A n 66 603 A n 67 604 A n 68 605 A n 69 606 A n 70 607 A n 71 608 A n 72 609 A n 73 610 A MET 1 n 1 MET 1 B LYS 2 n 2 LYS 2 B LEU 3 n 3 LEU 3 B LYS 4 n 4 LYS 4 B ILE 5 n 5 ILE 5 B LEU 6 n 6 LEU 6 B ASP 7 n 7 ASP 7 B ALA 8 n 8 LYS 8 B ASP 9 n 9 ASP 9 B ASN 10 n 10 ASN 10 B ALA 11 n 11 ALA 11 B THR 12 n 12 THR 12 B LEU 13 n 13 LEU 13 B ASN 14 n 14 ASN 14 B VAL 15 n 15 VAL 15 B PHE 16 n 16 PHE 16 B HIS 17 n 17 HIS 17 B ARG 18 n 18 ARG 18 B ASN 19 n 19 ASN 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B HIS 22 n 22 HIS 22 B LYS 23 n 23 LYS 23 B THR 24 n 24 THR 24 B ILE 25 n 25 ILE 25 B ASP 26 n 26 ASP 26 B ASN 27 n 27 ASN 27 B VAL 28 n 28 VAL 28 B PRO 29 n 29 PRO 29 B THR 30 n 30 THR 30 B ALA 31 n 31 ALA 31 B ASN 32 n 32 ASN 32 B LEU 33 n 33 LEU 33 B VAL 34 n 34 VAL 34 B ASP 35 n 35 ASP 35 B TRP 36 n 36 TRP 36 B TYR 37 n 37 TYR 37 B PRO 38 n 38 PRO 38 B LEU 39 n 39 LEU 39 B SER 40 n 40 SER 40 B ASN 41 n 41 ASN 41 B ALA 42 n 42 ALA 42 B TYR 43 n 43 TYR 43 B GLU 44 n 44 GLU 44 B TYR 45 n 45 TYR 45 B LYS 46 n 46 LYS 46 B LEU 47 n 47 LEU 47 B SER 48 n 48 SER 48 B ALA 49 n 49 ARG 49 B ASN 50 n 50 ASN 50 B GLY 51 n 51 GLY 51 B GLU 52 n 52 GLU 52 B TYR 53 n 53 TYR 53 B LEU 54 n 54 LEU 54 B GLU 55 n 55 GLU 55 B LEU 56 n 56 LEU 56 B LYS 57 n 57 LYS 57 B ARG 58 n 58 ARG 58 B LEU 59 n 59 LEU 59 B ARG 60 n 60 ARG 60 B SER 61 n 61 SER 61 B THR 62 n 62 THR 62 B LEU 63 n 63 LEU 63 B PRO 64 n 64 PRO 64 B SER 65 n 65 SER 65 B SER 66 n 66 SER 66 B TYR 67 n 67 TYR 67 B GLY 68 n 68 GLY 68 B LEU 69 n 69 LEU 69 B ASP 70 n 70 ASP 70 B ASP 71 n 71 ASP 71 B ASN 72 n 72 ASN 72 B ASN 73 n 73 ASN 73 B GLN 74 n 74 GLN 74 B ASP 75 n 75 ASP 75 B ILE 76 n 76 ILE 76 B ILE 77 n 77 ILE 77 B ARG 78 n 78 ARG 78 B ASP 79 n 79 ASP 79 B ASN 80 n 80 ASN 80 B ASN 81 n 81 ASN 81 B HIS 82 n 82 HIS 82 B ARG 83 n 83 ARG 83 B CYS 84 n 84 CYS 84 B LYS 85 n 85 LYS 85 B ILE 86 n 86 ILE 86 B GLY 87 n 87 GLY 87 B TYR 88 n 88 TYR 88 B TRP 89 n 89 TRP 89 B TYR 90 n 90 TYR 90 B ASN 91 n 91 ASN 91 B PRO 92 n 92 PRO 92 B ALA 93 n 93 ALA 93 B VAL 94 n 94 VAL 94 B ARG 95 n 95 ARG 95 B LYS 96 n 96 LYS 96 B ASP 97 n 97 ASP 97 B ASN 98 n 98 ASN 98 B LEU 99 n 99 LEU 99 B LYS 100 n 100 LYS 100 B ILE 101 n 101 ILE 101 B ILE 102 n 102 ILE 102 B GLU 103 n 103 GLU 103 B LYS 104 n 104 LYS 104 B ALA 105 n 105 ALA 105 B LYS 106 n 106 LYS 106 B GLN 107 n 107 GLN 107 B TYR 108 n 108 TYR 108 B GLY 109 n 109 GLY 109 B LEU 110 n 110 LEU 110 B PRO 111 n 111 PRO 111 B ILE 112 n 112 ILE 112 B ILE 113 n 113 ILE 113 B THR 114 n 114 THR 114 B GLU 115 n 115 GLU 115 B GLU 116 n 116 GLU 116 B TYR 117 n 117 TYR 117 B ASP 118 n 118 ASP 118 B ALA 119 n 119 ALA 119 B ASN 120 n 120 ASN 120 B THR 121 n 121 THR 121 B VAL 122 n 122 VAL 122 B GLU 123 n 123 GLU 123 B GLN 124 n 124 GLN 124 B GLY 125 n 125 GLY 125 B PHE 126 n 126 PHE 126 B ARG 127 n 127 ARG 127 B ASP 128 n 128 ASP 128 B ILE 129 n 129 ILE 129 B GLY 130 n 130 GLY 130 B VAL 131 n 131 VAL 131 B ILE 132 n 132 ILE 132 B PHE 133 n 133 PHE 133 B GLN 134 n 134 GLN 134 B SER 135 n 135 SER 135 B LEU 136 n 136 LEU 136 B LYS 137 n 137 LYS 137 B THR 138 n 138 THR 138 B ILE 139 n 139 ILE 139 B VAL 140 n 140 VAL 140 B VAL 141 n 141 VAL 141 B THR 142 n 142 THR 142 B ARG 143 n 143 ARG 143 B TYR 144 n 144 TYR 144 B LEU 145 n 145 LEU 145 B GLU 146 n 146 GLU 146 B GLY 147 n 147 GLY 147 B ALA 148 n 148 LYS 148 B THR 149 n 149 THR 149 B GLU 150 n 150 GLU 150 B ALA 151 n 151 GLU 151 B ALA 152 n 152 GLU 152 B LEU 153 n 153 LEU 153 B ALA 154 n 154 ARG 154 B ILE 155 n 155 ILE 155 B PHE 156 n 156 PHE 156 B ASN 157 n 157 ASN 157 B MET 158 n 158 MET 158 B LYS 159 n 159 LYS 159 B SER 160 n 160 SER 160 B GLU 161 n 161 GLU 161 B GLU 162 n 162 GLU 162 B SER 163 n 163 SER 163 B GLN 164 n 164 GLN 164 B LEU 165 n 165 LEU 165 B ASN 166 n 166 ASN 166 B GLU 167 n 167 GLU 167 B ALA 168 n 168 ALA 168 B LEU 169 n 169 LEU 169 B ALA 170 n 170 LYS 170 B GLU 171 n 171 GLU 171 B SER 172 n 172 SER 172 B ALA 173 n 173 ASP 173 B PHE 174 n 174 PHE 174 B SER 175 n 175 SER 175 B VAL 176 n 176 VAL 176 B ASP 177 n 177 ASP 177 B LEU 178 n 178 LEU 178 B THR 179 n 179 THR 179 B TYR 180 n 180 TYR 180 B SER 181 n 181 SER 181 B ASP 182 n 182 ASP 182 B LEU 183 n 183 LEU 183 B GLY 184 n 184 GLY 184 B GLN 185 n 185 GLN 185 B ILE 186 n 186 ILE 186 B TYR 187 n 187 TYR 187 B ASN 188 n 188 ASN 188 B MET 189 n 189 MET 189 B LEU 190 n 190 LEU 190 B LEU 191 n 191 LEU 191 B LEU 192 n 192 LEU 192 B MET 193 n 193 MET 193 B LYS 194 n 194 LYS 194 B LYS 195 n 195 LYS 195 B ILE 196 n 196 ILE 196 B SER 197 n 197 SER 197 B ALA 198 n 198 LYS 198 B 2.8767 -0.0810 0.5392 5.4423 0.6109 3.2963 0.1004 0.0011 -0.4375 -0.0959 0.2118 -0.9005 0.7016 0.1125 -0.2907 0.4204 0.0136 -0.0724 0.3242 -0.0099 0.5440 refined 38.1898 -11.1416 14.7924 X-RAY DIFFRACTION 2.9488 -1.4534 -0.5170 7.3490 1.3844 5.8790 -0.1021 -0.4062 0.5474 1.2323 0.0300 0.4663 -0.2377 -0.3929 0.0224 0.4814 -0.0347 0.0318 0.4426 -0.1365 0.4719 refined 27.3051 6.7495 27.1013 X-RAY DIFFRACTION 0.9814 -0.6070 0.0203 2.1533 -2.2465 4.4420 -0.0396 0.4738 -0.0594 -0.7918 -0.0707 0.3517 0.0909 -0.3695 0.0203 0.4998 -0.0314 -0.0929 0.5013 -0.0415 0.4169 refined 27.1447 -1.4046 6.9925 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'B' and resseq 92:198 X-RAY DIFFRACTION 2 chain 'B' and resseq 1:91 X-RAY DIFFRACTION 3 chain 'A' and resseq 538:599 software_defined_assembly PISA 2 dimeric 2540 -2 13090 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 B N LYS 4 B N LYS 4 B O THR 12 B O THR 12 B N ALA 11 B N ALA 11 B O VAL 28 B O VAL 28 B N LYS 46 B N LYS 46 B O GLU 55 B O GLU 55 B N LEU 54 B N LEU 54 B O CYS 84 B O CYS 84 1 A CG MET 538 A CG MET 1 1 Y 1 A SD MET 538 A SD MET 1 1 Y 1 A CE MET 538 A CE MET 1 1 Y 1 A CG LYS 539 A CG LYS 2 1 Y 1 A CD LYS 539 A CD LYS 2 1 Y 1 A CE LYS 539 A CE LYS 2 1 Y 1 A NZ LYS 539 A NZ LYS 2 1 Y 1 A CG GLU 540 A CG GLU 3 1 Y 1 A CD GLU 540 A CD GLU 3 1 Y 1 A OE1 GLU 540 A OE1 GLU 3 1 Y 1 A OE2 GLU 540 A OE2 GLU 3 1 Y 1 A CG GLN 541 A CG GLN 4 1 Y 1 A CD GLN 541 A CD GLN 4 1 Y 1 A OE1 GLN 541 A OE1 GLN 4 1 Y 1 A NE2 GLN 541 A NE2 GLN 4 1 Y 1 A CG GLU 543 A CG GLU 6 1 Y 1 A CD GLU 543 A CD GLU 6 1 Y 1 A OE1 GLU 543 A OE1 GLU 6 1 Y 1 A OE2 GLU 543 A OE2 GLU 6 1 Y 1 A CG ASP 544 A CG ASP 7 1 Y 1 A OD1 ASP 544 A OD1 ASP 7 1 Y 1 A OD2 ASP 544 A OD2 ASP 7 1 Y 1 A CG ARG 594 A CG ARG 57 1 Y 1 A CD ARG 594 A CD ARG 57 1 Y 1 A NE ARG 594 A NE ARG 57 1 Y 1 A CZ ARG 594 A CZ ARG 57 1 Y 1 A NH1 ARG 594 A NH1 ARG 57 1 Y 1 A NH2 ARG 594 A NH2 ARG 57 1 Y 1 A CG HIS 598 A CG HIS 61 1 Y 1 A ND1 HIS 598 A ND1 HIS 61 1 Y 1 A CD2 HIS 598 A CD2 HIS 61 1 Y 1 A CE1 HIS 598 A CE1 HIS 61 1 Y 1 A NE2 HIS 598 A NE2 HIS 61 1 Y 1 B CG LYS 8 B CG LYS 8 1 Y 1 B CD LYS 8 B CD LYS 8 1 Y 1 B CE LYS 8 B CE LYS 8 1 Y 1 B NZ LYS 8 B NZ LYS 8 1 Y 1 B CG ARG 49 B CG ARG 49 1 Y 1 B CD ARG 49 B CD ARG 49 1 Y 1 B NE ARG 49 B NE ARG 49 1 Y 1 B CZ ARG 49 B CZ ARG 49 1 Y 1 B NH1 ARG 49 B NH1 ARG 49 1 Y 1 B NH2 ARG 49 B NH2 ARG 49 1 Y 1 B CG LYS 148 B CG LYS 148 1 Y 1 B CD LYS 148 B CD LYS 148 1 Y 1 B CE LYS 148 B CE LYS 148 1 Y 1 B NZ LYS 148 B NZ LYS 148 1 Y 1 B CG GLU 151 B CG GLU 151 1 Y 1 B CD GLU 151 B CD GLU 151 1 Y 1 B OE1 GLU 151 B OE1 GLU 151 1 Y 1 B OE2 GLU 151 B OE2 GLU 151 1 Y 1 B CG GLU 152 B CG GLU 152 1 Y 1 B CD GLU 152 B CD GLU 152 1 Y 1 B OE1 GLU 152 B OE1 GLU 152 1 Y 1 B OE2 GLU 152 B OE2 GLU 152 1 Y 1 B CG ARG 154 B CG ARG 154 1 Y 1 B CD ARG 154 B CD ARG 154 1 Y 1 B NE ARG 154 B NE ARG 154 1 Y 1 B CZ ARG 154 B CZ ARG 154 1 Y 1 B NH1 ARG 154 B NH1 ARG 154 1 Y 1 B NH2 ARG 154 B NH2 ARG 154 1 Y 1 B CG LYS 170 B CG LYS 170 1 Y 1 B CD LYS 170 B CD LYS 170 1 Y 1 B CE LYS 170 B CE LYS 170 1 Y 1 B NZ LYS 170 B NZ LYS 170 1 Y 1 B CG ASP 173 B CG ASP 173 1 Y 1 B OD1 ASP 173 B OD1 ASP 173 1 Y 1 B OD2 ASP 173 B OD2 ASP 173 1 Y 1 B CG LYS 198 B CG LYS 198 1 Y 1 B CD LYS 198 B CD LYS 198 1 Y 1 B CE LYS 198 B CE LYS 198 1 Y 1 B NZ LYS 198 B NZ LYS 198 1 Y 1 A SER 600 A SER 63 1 Y 1 A ARG 601 A ARG 64 1 Y 1 A SER 602 A SER 65 1 Y 1 A LYS 603 A LYS 66 1 Y 1 A ARG 604 A ARG 67 1 Y 1 A LEU 605 A LEU 68 1 Y 1 A LYS 606 A LYS 69 1 Y 1 A ASP 607 A ASP 70 1 Y 1 A PHE 608 A PHE 71 1 Y 1 A MET 609 A MET 72 1 Y 1 A ASP 610 A ASP 73 1 Y 1 B B O OG1 GLU THR 146 149 2.04 1 B B O O HOH HOH 238 240 2.17 1 B B NZ OE1 LYS GLU 159 167 2.18 1 15.03 2.50 113.10 128.13 B B B N CA C GLY GLY GLY 147 147 147 N 1 B ASN 19 50.84 -120.47 1 B TRP 36 -134.26 -52.90 0.2426 0.2046 0.2065 1.9971 26.350 935 19002 18678 5.01 97.95 0.24 1 1.34 SAD 30.12 0.80 1.10 ML FLAT BULK SOLVENT MODEL 1.9971 26.350 54 2130 0 0 2076 0.011 2130 1.431 2881 14.906 812 0.106 329 0.007 373 0.3846 0.3322 2.1023 130 2481 98.00 0.3076 0.2746 2.2340 133 2524 99.00 0.2586 0.2385 2.4063 135 2551 99.00 0.2996 0.2241 2.6483 133 2531 100.00 0.2426 0.2112 3.0310 136 2572 100.00 0.2431 0.1928 3.8169 137 2609 100.00 0.2051 0.1804 26.3524 131 2475 90.00 1.997 30.0 4G6D 19002 18679 2.0 2.0 1 98.3 .879 1.997 2.12 2.75 1 5.2 98.3 data collection ADSC Quantum phasing SHARP refinement PHENIX (phenix.refine: 1.8_1069) data reduction HKL-2000 data scaling HKL-2000 G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex 1 N N 2 N N 3 N N 3 N N A MET 538 A MET 1 HELX_P A THR 548 A THR 11 1 1 11 A THR 550 A THR 13 HELX_P A GLY 562 A GLY 25 1 2 13 A THR 570 A THR 33 HELX_P A GLY 579 A GLY 42 1 3 10 A THR 581 A THR 44 HELX_P A HIS 598 A HIS 61 1 4 18 B ASN 32 B ASN 32 HELX_P B TRP 36 B TRP 36 5 5 5 B ASN 73 B ASN 73 HELX_P B ARG 78 B ARG 78 1 6 6 B ASP 79 B ASP 79 HELX_P B ARG 83 B ARG 83 5 7 5 B ASN 91 B ASN 91 HELX_P B TYR 108 B TYR 108 1 8 18 B ASP 118 B ASP 118 HELX_P B GLY 147 B GLY 147 1 9 30 B GLU 152 B GLU 152 HELX_P B ASN 157 B ASN 157 1 10 6 B SER 160 B SER 160 HELX_P B GLU 171 B GLU 171 1 11 12 B ASP 173 B ASP 173 HELX_P B LYS 198 B LYS 198 1 12 26 DNA BINDING PROTEIN Staphylococcus aureus RNA polymerase, DNA BINDING PROTEIN B GLY 147 B GLY 147 1 B LYS 148 B LYS 148 12.95 RPOD_STAA8 UNP 1 296 P0A0J0 LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKRLKDFMD Q4Z9Y5_9CAUD UNP 2 1 Q4Z9Y5 MKLKILDKDNATLNVFHRNKEHKTIDNVPTANLVDWYPLSNAYEYKLSRNGEYLELKRLRSTLPSSYGLDDNNQDIIRDN NHRCKIGYWYNPAVRKDNLKIIEKAKQYGLPIITEEYDANTVEQGFRDIGVIFQSLKTIVVTRYLEGKTEEELRIFNMKS EESQLNEALKESDFSVDLTYSDLGQIYNMLLLMKKISK 296 368 4G6D 538 610 P0A0J0 A 1 1 73 1 198 4G6D 1 198 Q4Z9Y5 B 2 1 198 1 LEU conflict MET 538 4G6D A P0A0J0 UNP 296 1 3 3 anti-parallel anti-parallel anti-parallel anti-parallel B LYS 2 B LYS 2 B ILE 5 B ILE 5 B ASN 10 B ASN 10 B ARG 18 B ARG 18 B GLU 21 B GLU 21 B PRO 29 B PRO 29 B TYR 43 B TYR 43 B LEU 47 B LEU 47 B TYR 53 B TYR 53 B ARG 58 B ARG 58 B CYS 84 B CYS 84 B LYS 85 B LYS 85 19 P 21 21 21