0.015234
0.000000
0.000000
0.000000
0.015234
0.000000
0.000000
0.000000
0.005371
0.000000
0.000000
0.000000
Liu, Q.F.
Chen, T.T.
Xu, Y.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
65.641
65.641
186.174
C22 H22 F3 N5 O2
445.438
3-(4-methylpiperazin-1-yl)-N-(3-nitrobenzyl)-7-(trifluoromethyl)quinolin-5-amine
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
C
N
3
N
N
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
N
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
N
Y
13
N
C
Y
14
N
C
Y
15
N
C
N
16
N
C
N
17
N
F
N
18
N
F
N
19
N
F
Y
20
N
C
Y
21
N
C
N
22
N
N
N
23
N
C
Y
24
N
C
Y
25
N
C
Y
26
N
C
Y
27
N
C
Y
28
N
C
Y
29
N
C
N
30
N
N
N
31
N
O
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
N
N
56
S
C
N
57
N
C
N
58
N
O
N
59
N
C
N
60
N
O
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
N
N
69
S
C
N
70
N
C
N
71
N
O
N
72
N
C
N
73
N
C
N
74
N
C
N
75
N
N
N
76
N
C
N
77
N
N
N
78
N
N
N
79
N
O
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
N
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
S
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
O
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
R
C
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
S
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
S
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
N
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
O
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
N
N
182
N
C
N
183
N
C
N
184
N
O
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
Y
196
N
C
Y
197
N
N
Y
198
N
C
Y
199
N
C
Y
200
N
N
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
S
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
N
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
N
289
N
C
N
290
N
S
N
291
N
C
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
O
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
R
C
N
363
N
O
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
N
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
N
413
N
O
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
N
429
N
O
N
430
N
C
N
431
N
C
N
432
N
C
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
1
N
sing
N
2
N
doub
N
3
N
sing
Y
4
N
doub
Y
5
N
sing
Y
6
N
sing
N
7
N
sing
Y
8
N
doub
Y
9
N
doub
N
10
N
sing
N
11
N
sing
N
12
N
sing
Y
13
N
sing
N
14
N
sing
Y
15
N
doub
Y
16
N
sing
Y
17
N
sing
N
18
N
sing
Y
19
N
doub
N
20
N
sing
Y
21
N
doub
Y
22
N
sing
Y
23
N
sing
Y
24
N
sing
Y
25
N
doub
Y
26
N
doub
Y
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
doub
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
Y
197
N
sing
Y
198
N
doub
Y
199
N
doub
N
200
N
sing
Y
201
N
sing
N
202
N
sing
Y
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
Y
305
N
doub
Y
306
N
sing
Y
307
N
sing
N
308
N
sing
Y
309
N
doub
N
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
Y
374
N
doub
Y
375
N
sing
Y
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
Y
402
N
doub
Y
403
N
sing
Y
404
N
sing
N
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
doub
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
22
6368
6372
10.1016/j.bmcl.2012.08.075
22985853
Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: Synthesis and SAR study as tyrosine kinase c-Met inhibitors.
2012
10.2210/pdb4gg5/pdb
pdb_00004gg5
100
1
CCD
2012-02-15
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.9791
1.0
BL17U
SSRF
0.9791
SYNCHROTRON
SSRF BEAMLINE BL17U
36033.594
Hepatocyte growth factor receptor
2.7.10.1
1
man
polymer
445.438
3-(4-methylpiperazin-1-yl)-N-(3-nitrobenzyl)-7-(trifluoromethyl)quinolin-5-amine
1
syn
non-polymer
18.015
water
53
nat
water
HGF receptor, HGF/SF receptor, Proto-oncogene c-Met, Scatter factor receptor, SF receptor, Tyrosine-protein kinase Met
no
no
MGSSHHHHHHGDSDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC
AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ
VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW
SFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG
MGSSHHHHHHGDSDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC
AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ
VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW
SFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
c-MET, MET
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET28a
1
2.78
55.80
VAPOR DIFFUSION, HANGING DROP
7.5
0.1M HEPES, 8% isopropanol, 3mM TECP, 16% PEG4000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2012-10-03
1
1
2012-10-17
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-08-05
REL
REL
0J3
3-(4-methylpiperazin-1-yl)-N-(3-nitrobenzyl)-7-(trifluoromethyl)quinolin-5-amine
HOH
water
DRG
1
2
0J3
0J3
1401
A
HOH
1
3
HOH
HOH
1501
A
HOH
2
3
HOH
HOH
1502
A
HOH
3
3
HOH
HOH
1503
A
HOH
4
3
HOH
HOH
1504
A
HOH
5
3
HOH
HOH
1505
A
HOH
6
3
HOH
HOH
1506
A
HOH
7
3
HOH
HOH
1507
A
HOH
8
3
HOH
HOH
1508
A
HOH
9
3
HOH
HOH
1509
A
HOH
10
3
HOH
HOH
1510
A
HOH
11
3
HOH
HOH
1511
A
HOH
12
3
HOH
HOH
1512
A
HOH
13
3
HOH
HOH
1513
A
HOH
14
3
HOH
HOH
1514
A
HOH
15
3
HOH
HOH
1515
A
HOH
16
3
HOH
HOH
1516
A
HOH
17
3
HOH
HOH
1517
A
HOH
18
3
HOH
HOH
1518
A
HOH
19
3
HOH
HOH
1519
A
HOH
20
3
HOH
HOH
1520
A
HOH
21
3
HOH
HOH
1521
A
HOH
22
3
HOH
HOH
1522
A
HOH
23
3
HOH
HOH
1523
A
HOH
24
3
HOH
HOH
1524
A
HOH
25
3
HOH
HOH
1525
A
HOH
26
3
HOH
HOH
1526
A
HOH
27
3
HOH
HOH
1527
A
HOH
28
3
HOH
HOH
1528
A
HOH
29
3
HOH
HOH
1529
A
HOH
30
3
HOH
HOH
1530
A
HOH
32
3
HOH
HOH
1531
A
HOH
33
3
HOH
HOH
1532
A
HOH
34
3
HOH
HOH
1533
A
HOH
35
3
HOH
HOH
1534
A
HOH
36
3
HOH
HOH
1535
A
HOH
37
3
HOH
HOH
1536
A
HOH
38
3
HOH
HOH
1537
A
HOH
39
3
HOH
HOH
1538
A
HOH
40
3
HOH
HOH
1539
A
HOH
41
3
HOH
HOH
1540
A
HOH
42
3
HOH
HOH
1541
A
HOH
43
3
HOH
HOH
1542
A
HOH
44
3
HOH
HOH
1543
A
HOH
45
3
HOH
HOH
1544
A
HOH
46
3
HOH
HOH
1545
A
HOH
47
3
HOH
HOH
1546
A
HOH
48
3
HOH
HOH
1547
A
HOH
49
3
HOH
HOH
1548
A
HOH
50
3
HOH
HOH
1549
A
HOH
51
3
HOH
HOH
1550
A
HOH
52
3
HOH
HOH
1551
A
HOH
53
3
HOH
HOH
1552
A
HOH
54
3
HOH
HOH
1553
A
n
1
1028
A
n
2
1029
A
n
3
1030
A
n
4
1031
A
n
5
1032
A
n
6
1033
A
n
7
1034
A
n
8
1035
A
n
9
1036
A
n
10
1037
A
n
11
1038
A
n
12
1039
A
n
13
1040
A
n
14
1041
A
n
15
1042
A
n
16
1043
A
n
17
1044
A
n
18
1045
A
n
19
1046
A
n
20
1047
A
n
21
1048
A
n
22
1049
A
n
23
1050
A
n
24
1051
A
n
25
1052
A
n
26
1053
A
n
27
1054
A
n
28
1055
A
n
29
1056
A
n
30
1057
A
n
31
1058
A
n
32
1059
A
n
33
1060
A
n
34
1061
A
n
35
1062
A
n
36
1063
A
GLN
1064
n
37
GLN
1064
A
ALA
1065
n
38
ALA
1065
A
VAL
1066
n
39
VAL
1066
A
GLN
1067
n
40
GLN
1067
A
HIS
1068
n
41
HIS
1068
A
VAL
1069
n
42
VAL
1069
A
VAL
1070
n
43
VAL
1070
A
ILE
1071
n
44
ILE
1071
A
GLY
1072
n
45
GLY
1072
A
PRO
1073
n
46
PRO
1073
A
SER
1074
n
47
SER
1074
A
SER
1075
n
48
SER
1075
A
LEU
1076
n
49
LEU
1076
A
ILE
1077
n
50
ILE
1077
A
VAL
1078
n
51
VAL
1078
A
HIS
1079
n
52
HIS
1079
A
PHE
1080
n
53
PHE
1080
A
ASN
1081
n
54
ASN
1081
A
GLU
1082
n
55
GLU
1082
A
VAL
1083
n
56
VAL
1083
A
ILE
1084
n
57
ILE
1084
A
GLY
1085
n
58
GLY
1085
A
ARG
1086
n
59
ARG
1086
A
GLY
1087
n
60
GLY
1087
A
HIS
1088
n
61
HIS
1088
A
PHE
1089
n
62
PHE
1089
A
GLY
1090
n
63
GLY
1090
A
CYS
1091
n
64
CYS
1091
A
VAL
1092
n
65
VAL
1092
A
TYR
1093
n
66
TYR
1093
A
HIS
1094
n
67
HIS
1094
A
GLY
1095
n
68
GLY
1095
A
THR
1096
n
69
THR
1096
A
LEU
1097
n
70
LEU
1097
A
LEU
1098
n
71
LEU
1098
A
ASP
1099
n
72
ASP
1099
A
ASN
1100
n
73
ASN
1100
A
ASP
1101
n
74
ASP
1101
A
GLY
1102
n
75
GLY
1102
A
LYS
1103
n
76
LYS
1103
A
LYS
1104
n
77
LYS
1104
A
ILE
1105
n
78
ILE
1105
A
HIS
1106
n
79
HIS
1106
A
CYS
1107
n
80
CYS
1107
A
ALA
1108
n
81
ALA
1108
A
VAL
1109
n
82
VAL
1109
A
LYS
1110
n
83
LYS
1110
A
SER
1111
n
84
SER
1111
A
LEU
1112
n
85
LEU
1112
A
ASN
1113
n
86
ASN
1113
A
ARG
1114
n
87
ARG
1114
A
ILE
1115
n
88
ILE
1115
A
THR
1116
n
89
THR
1116
A
ASP
1117
n
90
ASP
1117
A
ILE
1118
n
91
ILE
1118
A
n
92
1119
A
n
93
1120
A
n
94
1121
A
n
95
1122
A
GLN
1123
n
96
GLN
1123
A
PHE
1124
n
97
PHE
1124
A
LEU
1125
n
98
LEU
1125
A
THR
1126
n
99
THR
1126
A
GLU
1127
n
100
GLU
1127
A
GLY
1128
n
101
GLY
1128
A
ILE
1129
n
102
ILE
1129
A
ILE
1130
n
103
ILE
1130
A
MET
1131
n
104
MET
1131
A
LYS
1132
n
105
LYS
1132
A
ASP
1133
n
106
ASP
1133
A
PHE
1134
n
107
PHE
1134
A
SER
1135
n
108
SER
1135
A
HIS
1136
n
109
HIS
1136
A
PRO
1137
n
110
PRO
1137
A
ASN
1138
n
111
ASN
1138
A
VAL
1139
n
112
VAL
1139
A
LEU
1140
n
113
LEU
1140
A
SER
1141
n
114
SER
1141
A
LEU
1142
n
115
LEU
1142
A
LEU
1143
n
116
LEU
1143
A
GLY
1144
n
117
GLY
1144
A
ILE
1145
n
118
ILE
1145
A
CYS
1146
n
119
CYS
1146
A
LEU
1147
n
120
LEU
1147
A
ARG
1148
n
121
ARG
1148
A
n
122
1149
A
n
123
1150
A
n
124
1151
A
SER
1152
n
125
SER
1152
A
PRO
1153
n
126
PRO
1153
A
LEU
1154
n
127
LEU
1154
A
VAL
1155
n
128
VAL
1155
A
VAL
1156
n
129
VAL
1156
A
LEU
1157
n
130
LEU
1157
A
PRO
1158
n
131
PRO
1158
A
TYR
1159
n
132
TYR
1159
A
MET
1160
n
133
MET
1160
A
LYS
1161
n
134
LYS
1161
A
HIS
1162
n
135
HIS
1162
A
GLY
1163
n
136
GLY
1163
A
ASP
1164
n
137
ASP
1164
A
LEU
1165
n
138
LEU
1165
A
ARG
1166
n
139
ARG
1166
A
ASN
1167
n
140
ASN
1167
A
PHE
1168
n
141
PHE
1168
A
ILE
1169
n
142
ILE
1169
A
ARG
1170
n
143
ARG
1170
A
ASN
1171
n
144
ASN
1171
A
GLU
1172
n
145
GLU
1172
A
THR
1173
n
146
THR
1173
A
HIS
1174
n
147
HIS
1174
A
ASN
1175
n
148
ASN
1175
A
PRO
1176
n
149
PRO
1176
A
THR
1177
n
150
THR
1177
A
VAL
1178
n
151
VAL
1178
A
LYS
1179
n
152
LYS
1179
A
ASP
1180
n
153
ASP
1180
A
LEU
1181
n
154
LEU
1181
A
ILE
1182
n
155
ILE
1182
A
GLY
1183
n
156
GLY
1183
A
PHE
1184
n
157
PHE
1184
A
GLY
1185
n
158
GLY
1185
A
LEU
1186
n
159
LEU
1186
A
GLN
1187
n
160
GLN
1187
A
VAL
1188
n
161
VAL
1188
A
ALA
1189
n
162
ALA
1189
A
LYS
1190
n
163
LYS
1190
A
GLY
1191
n
164
GLY
1191
A
MET
1192
n
165
MET
1192
A
LYS
1193
n
166
LYS
1193
A
TYR
1194
n
167
TYR
1194
A
LEU
1195
n
168
LEU
1195
A
ALA
1196
n
169
ALA
1196
A
SER
1197
n
170
SER
1197
A
LYS
1198
n
171
LYS
1198
A
LYS
1199
n
172
LYS
1199
A
PHE
1200
n
173
PHE
1200
A
VAL
1201
n
174
VAL
1201
A
HIS
1202
n
175
HIS
1202
A
ARG
1203
n
176
ARG
1203
A
ASP
1204
n
177
ASP
1204
A
LEU
1205
n
178
LEU
1205
A
ALA
1206
n
179
ALA
1206
A
ALA
1207
n
180
ALA
1207
A
ARG
1208
n
181
ARG
1208
A
ASN
1209
n
182
ASN
1209
A
CYS
1210
n
183
CYS
1210
A
MET
1211
n
184
MET
1211
A
LEU
1212
n
185
LEU
1212
A
ASP
1213
n
186
ASP
1213
A
GLU
1214
n
187
GLU
1214
A
LYS
1215
n
188
LYS
1215
A
PHE
1216
n
189
PHE
1216
A
THR
1217
n
190
THR
1217
A
VAL
1218
n
191
VAL
1218
A
LYS
1219
n
192
LYS
1219
A
VAL
1220
n
193
VAL
1220
A
ALA
1221
n
194
ALA
1221
A
ASP
1222
n
195
ASP
1222
A
PHE
1223
n
196
PHE
1223
A
GLY
1224
n
197
GLY
1224
A
LEU
1225
n
198
LEU
1225
A
ALA
1226
n
199
ALA
1226
A
ARG
1227
n
200
ARG
1227
A
ASP
1228
n
201
ASP
1228
A
MET
1229
n
202
MET
1229
A
TYR
1230
n
203
TYR
1230
A
ASP
1231
n
204
ASP
1231
A
LYS
1232
n
205
LYS
1232
A
GLU
1233
n
206
GLU
1233
A
TYR
1234
n
207
TYR
1234
A
TYR
1235
n
208
TYR
1235
A
SER
1236
n
209
SER
1236
A
VAL
1237
n
210
VAL
1237
A
HIS
1238
n
211
HIS
1238
A
ASN
1239
n
212
ASN
1239
A
LYS
1240
n
213
LYS
1240
A
THR
1241
n
214
THR
1241
A
GLY
1242
n
215
GLY
1242
A
ALA
1243
n
216
ALA
1243
A
LYS
1244
n
217
LYS
1244
A
LEU
1245
n
218
LEU
1245
A
PRO
1246
n
219
PRO
1246
A
VAL
1247
n
220
VAL
1247
A
LYS
1248
n
221
LYS
1248
A
TRP
1249
n
222
TRP
1249
A
MET
1250
n
223
MET
1250
A
ALA
1251
n
224
ALA
1251
A
LEU
1252
n
225
LEU
1252
A
GLU
1253
n
226
GLU
1253
A
SER
1254
n
227
SER
1254
A
LEU
1255
n
228
LEU
1255
A
GLN
1256
n
229
GLN
1256
A
THR
1257
n
230
THR
1257
A
GLN
1258
n
231
GLN
1258
A
LYS
1259
n
232
LYS
1259
A
PHE
1260
n
233
PHE
1260
A
THR
1261
n
234
THR
1261
A
THR
1262
n
235
THR
1262
A
LYS
1263
n
236
LYS
1263
A
SER
1264
n
237
SER
1264
A
ASP
1265
n
238
ASP
1265
A
VAL
1266
n
239
VAL
1266
A
TRP
1267
n
240
TRP
1267
A
SER
1268
n
241
SER
1268
A
PHE
1269
n
242
PHE
1269
A
GLY
1270
n
243
GLY
1270
A
VAL
1271
n
244
VAL
1271
A
LEU
1272
n
245
LEU
1272
A
LEU
1273
n
246
LEU
1273
A
TRP
1274
n
247
TRP
1274
A
GLU
1275
n
248
GLU
1275
A
LEU
1276
n
249
LEU
1276
A
MET
1277
n
250
MET
1277
A
THR
1278
n
251
THR
1278
A
ARG
1279
n
252
ARG
1279
A
GLY
1280
n
253
GLY
1280
A
ALA
1281
n
254
ALA
1281
A
PRO
1282
n
255
PRO
1282
A
PRO
1283
n
256
PRO
1283
A
TYR
1284
n
257
TYR
1284
A
PRO
1285
n
258
PRO
1285
A
ASP
1286
n
259
ASP
1286
A
VAL
1287
n
260
VAL
1287
A
ASN
1288
n
261
ASN
1288
A
THR
1289
n
262
THR
1289
A
PHE
1290
n
263
PHE
1290
A
ASP
1291
n
264
ASP
1291
A
ILE
1292
n
265
ILE
1292
A
THR
1293
n
266
THR
1293
A
VAL
1294
n
267
VAL
1294
A
TYR
1295
n
268
TYR
1295
A
LEU
1296
n
269
LEU
1296
A
LEU
1297
n
270
LEU
1297
A
GLN
1298
n
271
GLN
1298
A
GLY
1299
n
272
GLY
1299
A
ARG
1300
n
273
ARG
1300
A
ARG
1301
n
274
ARG
1301
A
LEU
1302
n
275
LEU
1302
A
LEU
1303
n
276
LEU
1303
A
GLN
1304
n
277
GLN
1304
A
PRO
1305
n
278
PRO
1305
A
GLU
1306
n
279
GLU
1306
A
TYR
1307
n
280
TYR
1307
A
CYS
1308
n
281
CYS
1308
A
PRO
1309
n
282
PRO
1309
A
ASP
1310
n
283
ASP
1310
A
PRO
1311
n
284
PRO
1311
A
LEU
1312
n
285
LEU
1312
A
TYR
1313
n
286
TYR
1313
A
GLU
1314
n
287
GLU
1314
A
VAL
1315
n
288
VAL
1315
A
MET
1316
n
289
MET
1316
A
LEU
1317
n
290
LEU
1317
A
LYS
1318
n
291
LYS
1318
A
CYS
1319
n
292
CYS
1319
A
TRP
1320
n
293
TRP
1320
A
HIS
1321
n
294
HIS
1321
A
PRO
1322
n
295
PRO
1322
A
LYS
1323
n
296
LYS
1323
A
ALA
1324
n
297
ALA
1324
A
GLU
1325
n
298
GLU
1325
A
MET
1326
n
299
MET
1326
A
ARG
1327
n
300
ARG
1327
A
PRO
1328
n
301
PRO
1328
A
SER
1329
n
302
SER
1329
A
PHE
1330
n
303
PHE
1330
A
SER
1331
n
304
SER
1331
A
GLU
1332
n
305
GLU
1332
A
LEU
1333
n
306
LEU
1333
A
VAL
1334
n
307
VAL
1334
A
SER
1335
n
308
SER
1335
A
ARG
1336
n
309
ARG
1336
A
ILE
1337
n
310
ILE
1337
A
SER
1338
n
311
SER
1338
A
ALA
1339
n
312
ALA
1339
A
ILE
1340
n
313
ILE
1340
A
PHE
1341
n
314
PHE
1341
A
SER
1342
n
315
SER
1342
A
THR
1343
n
316
THR
1343
A
PHE
1344
n
317
PHE
1344
A
n
318
1345
A
n
319
1346
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
1084
A
N
ILE
57
A
O
VAL
1092
A
O
VAL
65
A
N
LEU
1097
A
N
LEU
70
A
O
ILE
1105
A
O
ILE
78
A
N
ALA
1108
A
N
ALA
81
A
O
LEU
1157
A
O
LEU
130
A
O
VAL
1156
A
O
VAL
129
A
N
GLY
1144
A
N
GLY
117
A
N
MET
1211
A
N
MET
184
A
O
LYS
1219
A
O
LYS
192
A
N
SER
1236
A
N
SER
209
A
O
LEU
1245
A
O
LEU
218
1
A
CG
GLN
1064
A
CG
GLN
37
1
Y
1
A
CD
GLN
1064
A
CD
GLN
37
1
Y
1
A
OE1
GLN
1064
A
OE1
GLN
37
1
Y
1
A
NE2
GLN
1064
A
NE2
GLN
37
1
Y
1
A
CG
PHE
1124
A
CG
PHE
97
1
Y
1
A
CD1
PHE
1124
A
CD1
PHE
97
1
Y
1
A
CD2
PHE
1124
A
CD2
PHE
97
1
Y
1
A
CE1
PHE
1124
A
CE1
PHE
97
1
Y
1
A
CE2
PHE
1124
A
CE2
PHE
97
1
Y
1
A
CZ
PHE
1124
A
CZ
PHE
97
1
Y
1
A
CG
GLU
1127
A
CG
GLU
100
1
Y
1
A
CD
GLU
1127
A
CD
GLU
100
1
Y
1
A
OE1
GLU
1127
A
OE1
GLU
100
1
Y
1
A
OE2
GLU
1127
A
OE2
GLU
100
1
Y
1
A
CG
ARG
1148
A
CG
ARG
121
1
Y
1
A
CD
ARG
1148
A
CD
ARG
121
1
Y
1
A
NE
ARG
1148
A
NE
ARG
121
1
Y
1
A
CZ
ARG
1148
A
CZ
ARG
121
1
Y
1
A
NH1
ARG
1148
A
NH1
ARG
121
1
Y
1
A
NH2
ARG
1148
A
NH2
ARG
121
1
Y
1
A
OG
SER
1152
A
OG
SER
125
1
Y
1
A
CD
GLN
1258
A
CD
GLN
231
1
Y
1
A
OE1
GLN
1258
A
OE1
GLN
231
1
Y
1
A
NE2
GLN
1258
A
NE2
GLN
231
1
Y
1
A
CD
LYS
1323
A
CD
LYS
296
1
Y
1
A
CE
LYS
1323
A
CE
LYS
296
1
Y
1
A
NZ
LYS
1323
A
NZ
LYS
296
1
Y
1
A
MET
1028
A
MET
1
1
Y
1
A
GLY
1029
A
GLY
2
1
Y
1
A
SER
1030
A
SER
3
1
Y
1
A
SER
1031
A
SER
4
1
Y
1
A
HIS
1032
A
HIS
5
1
Y
1
A
HIS
1033
A
HIS
6
1
Y
1
A
HIS
1034
A
HIS
7
1
Y
1
A
HIS
1035
A
HIS
8
1
Y
1
A
HIS
1036
A
HIS
9
1
Y
1
A
HIS
1037
A
HIS
10
1
Y
1
A
GLY
1038
A
GLY
11
1
Y
1
A
ASP
1039
A
ASP
12
1
Y
1
A
SER
1040
A
SER
13
1
Y
1
A
ASP
1041
A
ASP
14
1
Y
1
A
ILE
1042
A
ILE
15
1
Y
1
A
SER
1043
A
SER
16
1
Y
1
A
SER
1044
A
SER
17
1
Y
1
A
PRO
1045
A
PRO
18
1
Y
1
A
LEU
1046
A
LEU
19
1
Y
1
A
LEU
1047
A
LEU
20
1
Y
1
A
GLN
1048
A
GLN
21
1
Y
1
A
ASN
1049
A
ASN
22
1
Y
1
A
THR
1050
A
THR
23
1
Y
1
A
VAL
1051
A
VAL
24
1
Y
1
A
HIS
1052
A
HIS
25
1
Y
1
A
ILE
1053
A
ILE
26
1
Y
1
A
ASP
1054
A
ASP
27
1
Y
1
A
LEU
1055
A
LEU
28
1
Y
1
A
SER
1056
A
SER
29
1
Y
1
A
ALA
1057
A
ALA
30
1
Y
1
A
LEU
1058
A
LEU
31
1
Y
1
A
ASN
1059
A
ASN
32
1
Y
1
A
PRO
1060
A
PRO
33
1
Y
1
A
GLU
1061
A
GLU
34
1
Y
1
A
LEU
1062
A
LEU
35
1
Y
1
A
VAL
1063
A
VAL
36
1
Y
1
A
GLY
1119
A
GLY
92
1
Y
1
A
GLU
1120
A
GLU
93
1
Y
1
A
VAL
1121
A
VAL
94
1
Y
1
A
SER
1122
A
SER
95
1
Y
1
A
SER
1149
A
SER
122
1
Y
1
A
GLU
1150
A
GLU
123
1
Y
1
A
GLY
1151
A
GLY
124
1
Y
1
A
ILE
1345
A
ILE
318
1
Y
1
A
GLY
1346
A
GLY
319
1
Y
1
A
THR
1116
-95.08
-65.26
1
A
ASP
1117
-74.35
-80.75
1
A
GLU
1127
-80.96
37.16
1
A
LEU
1147
-77.64
-75.43
1
A
ARG
1203
85.46
-11.68
1
A
ASP
1204
-147.48
43.73
1
A
ALA
1221
-122.37
-151.55
1
A
ASP
1231
-155.14
88.44
1
A
ASN
1239
78.27
-24.02
1
A
THR
1343
-59.36
-176.98
104.490
37.1614
14.440
0.2681
0.2099
0.2157
2.423
37.9680
1545
15939
15442
10.0100
94.9900
1.000
0.100
0.7953
0.3500
10.01%
1
1.340
MOLECULAR REPLACEMENT
26.3900
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
2.423
37.9680
53
2257
32
0
2172
0.008
2271
1.169
3080
0.081
340
0.005
382
16.973
839
0.3883
0.2851
2.5015
112
1007
1119
11
78.0000
0.3316
0.2633
2.5909
128
1152
1280
11
90.0000
0.3434
0.2483
2.6946
141
1262
1403
11
97.0000
0.3105
0.2431
2.8172
143
1297
1440
11
98.0000
0.3226
0.2417
2.9657
144
1288
1432
11
99.0000
0.3106
0.2315
3.1514
143
1292
1435
11
98.0000
0.2733
0.2099
3.3946
144
1294
1438
11
98.0000
0.2335
0.1818
3.7359
144
1298
1442
11
98.0000
0.1840
0.1741
4.2759
144
1297
1441
11
97.0000
0.2261
0.1766
5.3847
148
1326
1474
11
96.0000
0.3170
0.2317
37.9722
154
1384
1538
11
94.0000
48.234
2.42
62.058
4GG5
15939
15512
-3.000
0.094
1
15.730
97.600
0.638
2.42
2.480
3.090
8778
1147
1
98.800
0.531
2.480
2.550
3.770
8860
1125
1
98.200
0.465
2.550
2.620
4.320
8713
1109
1
98.200
0.393
2.620
2.710
5.210
8520
1061
1
99.000
0.342
2.710
2.790
6.240
8226
1040
1
98.500
0.271
2.790
2.890
7.640
8284
1017
1
98.900
0.231
2.890
3.000
9.080
8219
977
1
98.100
0.176
3.000
3.120
11.950
7840
949
1
98.800
0.151
3.120
3.260
14.370
7801
891
1
99.000
0.114
3.260
3.420
18.010
7603
876
1
97.900
0.094
3.420
3.610
22.220
7058
814
1
97.600
0.081
3.610
3.830
24.620
6676
785
1
98.200
0.067
3.830
4.090
28.180
6183
732
1
96.700
0.060
4.090
4.420
31.470
5646
681
1
95.600
0.055
4.420
4.840
32.300
5389
643
1
97.100
0.053
4.840
5.410
31.910
4767
574
1
96.300
0.052
5.410
6.250
30.960
4340
508
1
95.300
0.045
6.250
7.650
32.640
3711
450
1
95.100
0.034
7.650
10.820
37.580
2870
361
1
94.500
0.030
10.820
35.090
1388
199
1
85.800
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.8_1069
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
Blu-Ice
data reduction
XDS
Crystal structure of CMET in complex with novel inhibitor
1
N
N
2
N
N
3
N
N
A
VAL
1066
A
VAL
39
HELX_P
A
VAL
1070
A
VAL
43
5
1
5
A
GLY
1072
A
GLY
45
HELX_P
A
SER
1074
A
SER
47
5
2
3
A
GLY
1128
A
GLY
101
HELX_P
A
PHE
1134
A
PHE
107
5
3
7
A
ASP
1164
A
ASP
137
HELX_P
A
ASN
1171
A
ASN
144
1
4
8
A
THR
1177
A
THR
150
HELX_P
A
LYS
1198
A
LYS
171
1
5
22
A
ALA
1206
A
ALA
179
HELX_P
A
ARG
1208
A
ARG
181
5
6
3
A
PHE
1223
A
PHE
196
HELX_P
A
ARG
1227
A
ARG
200
5
7
5
A
ASP
1231
A
ASP
204
HELX_P
A
GLU
1233
A
GLU
206
5
8
3
A
LYS
1248
A
LYS
221
HELX_P
A
MET
1250
A
MET
223
5
9
3
A
ALA
1251
A
ALA
224
HELX_P
A
GLN
1258
A
GLN
231
1
10
8
A
THR
1261
A
THR
234
HELX_P
A
THR
1278
A
THR
251
1
11
18
A
ASP
1291
A
ASP
264
HELX_P
A
GLN
1298
A
GLN
271
1
12
8
A
PRO
1309
A
PRO
282
HELX_P
A
TRP
1320
A
TRP
293
1
13
12
A
LYS
1323
A
LYS
296
HELX_P
A
ARG
1327
A
ARG
300
5
14
5
A
SER
1329
A
SER
302
HELX_P
A
THR
1343
A
THR
316
1
15
15
TRANSFERASE/TRANSFERASE INHIBITOR
CMET inhibitor, TRANSFERASE-TRANSFERASE INHIBITOR complex
MET_HUMAN
UNP
1
1038
P08581
GDSDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD
IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS
KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM
TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG
1038
1346
4GG5
1038
1346
P08581
A
1
11
319
1
expression tag
MET
1028
4GG5
A
P08581
UNP
1
1
expression tag
GLY
1029
4GG5
A
P08581
UNP
2
1
expression tag
SER
1030
4GG5
A
P08581
UNP
3
1
expression tag
SER
1031
4GG5
A
P08581
UNP
4
1
expression tag
HIS
1032
4GG5
A
P08581
UNP
5
1
expression tag
HIS
1033
4GG5
A
P08581
UNP
6
1
expression tag
HIS
1034
4GG5
A
P08581
UNP
7
1
expression tag
HIS
1035
4GG5
A
P08581
UNP
8
1
expression tag
HIS
1036
4GG5
A
P08581
UNP
9
1
expression tag
HIS
1037
4GG5
A
P08581
UNP
10
5
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
1076
A
LEU
49
A
GLY
1087
A
GLY
60
A
GLY
1090
A
GLY
63
A
LEU
1098
A
LEU
71
A
LYS
1104
A
LYS
77
A
SER
1111
A
SER
84
A
LEU
1154
A
LEU
127
A
PRO
1158
A
PRO
131
A
GLY
1144
A
GLY
117
A
CYS
1146
A
CYS
119
A
CYS
1210
A
CYS
183
A
LEU
1212
A
LEU
185
A
VAL
1218
A
VAL
191
A
VAL
1220
A
VAL
193
A
TYR
1235
A
TYR
208
A
VAL
1237
A
VAL
210
A
LYS
1244
A
LYS
217
A
PRO
1246
A
PRO
219
BINDING SITE FOR RESIDUE 0J3 A 1401
A
0J3
1401
Software
13
A
ILE
1084
A
ILE
57
13
1_555
A
ALA
1108
A
ALA
81
13
1_555
A
LEU
1140
A
LEU
113
13
1_555
A
LEU
1157
A
LEU
130
13
1_555
A
PRO
1158
A
PRO
131
13
1_555
A
TYR
1159
A
TYR
132
13
1_555
A
MET
1160
A
MET
133
13
1_555
A
ARG
1208
A
ARG
181
13
1_555
A
ASN
1209
A
ASN
182
13
1_555
A
MET
1211
A
MET
184
13
1_555
A
ALA
1221
A
ALA
194
13
1_555
A
ASP
1222
A
ASP
195
13
1_555
A
TYR
1230
A
TYR
203
13
1_555
92
P 41 21 2