0.019944 0.000000 0.000000 0.000000 0.018345 0.000000 0.000000 0.000000 0.015567 0.00000 0.00000 0.00000 Samson, J. Spinelli, S. Cambillau, C. Moineau, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 50.140 54.510 64.240 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N O N 139 N C N 140 N O N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C Y 156 N C Y 157 N N Y 158 N C Y 159 N C Y 160 N N N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N O N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 S C N 180 N C N 181 N C N 182 N C N 183 N O N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C N 202 N C N 203 N C N 204 N C N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C N 224 N C N 225 N C N 226 N C N 227 N N N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N N N 245 S C N 246 N C N 247 N O N 248 N C N 249 N C N 250 N S N 251 N C N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C Y 269 N C Y 270 N C Y 271 N C Y 272 N C Y 273 N C Y 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C N 309 N O N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 R C N 323 N O N 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing Y 153 N sing Y 154 N doub Y 155 N doub N 156 N sing Y 157 N sing N 158 N sing Y 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N doub Y 262 N sing Y 263 N sing N 264 N sing Y 265 N doub N 266 N sing Y 267 N doub N 268 N sing Y 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing UK Mol.Microbiol. MOMIEE 2007 0950-382X 87 756 768 10.1111/mmi.12129 23279123 Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type III toxin-antitoxin system. 2013 10.2210/pdb4glk/pdb pdb_00004glk 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2011-10-14 PSI PILATUS 6M channel cut Si(111) SINGLE WAVELENGTH M x-ray 1 0.9791 1.0 PROXIMA 1 SOLEIL 0.9791 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 20308.732 AbiQ 3.1.-.- UNP residues 13-183 S51L 1 man polymer 92.094 GLYCEROL 3 syn non-polymer 18.015 water 69 nat water no no GTLRFFTVTDEYIAYLRKFESKVHYQYENNASTYVGVVLKKNDFNYFIPLLSYKKGNPEKDKAMKKRSRIVTRLFEIGNI NNPLGYLLHHNMIPVPDSELIPLPLDLKKPKHKMMQKQLIYMKSISEKIENKSEVVYRKAAHEKDGYYLKFSCDFKLLEA KATLYSKKSTFQ GTLRFFTVTDEYIAYLRKFESKVHYQYENNASTYVGVVLKKNDFNYFIPLLSYKKGNPEKDKAMKKRSRIVTRLFEIGNI NNPLGYLLHHNMIPVPDSELIPLPLDLKKPKHKMMQKQLIYMKSISEKIENKSEVVYRKAAHEKDGYYLKFSCDFKLLEA KATLYSKKSTFQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample abiQ 1358 Lactococcus lactis 83333 Escherichia coli K12 plasmid pDEST17 1 2.16 43.09 VAPOR DIFFUSION, SITTING DROP 6.0 buffer: 1 M potassium/sodium tartrate, 0.1 M MES, pH 6.0, drop: 200 nL 4.6 mg/mL protein + 100 nL buffer, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations Refinement description 1 0 2013-01-16 1 1 2013-02-20 1 2 2023-09-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-08-14 REL REL GOL GLYCEROL HOH water 2XDD PDB ENTRY 2XDD PDB experimental model GOL 1 2 GOL GOL 201 A GOL 2 2 GOL GOL 202 A GOL 3 2 GOL GOL 203 A HOH 1 3 HOH HOH 301 A HOH 2 3 HOH HOH 302 A HOH 3 3 HOH HOH 303 A HOH 4 3 HOH HOH 304 A HOH 5 3 HOH HOH 305 A HOH 6 3 HOH HOH 306 A HOH 7 3 HOH HOH 307 A HOH 8 3 HOH HOH 308 A HOH 9 3 HOH HOH 309 A HOH 10 3 HOH HOH 310 A HOH 11 3 HOH HOH 311 A HOH 12 3 HOH HOH 312 A HOH 13 3 HOH HOH 313 A HOH 14 3 HOH HOH 314 A HOH 15 3 HOH HOH 315 A HOH 16 3 HOH HOH 316 A HOH 17 3 HOH HOH 317 A HOH 18 3 HOH HOH 318 A HOH 19 3 HOH HOH 319 A HOH 20 3 HOH HOH 320 A HOH 21 3 HOH HOH 321 A HOH 22 3 HOH HOH 322 A HOH 23 3 HOH HOH 323 A HOH 24 3 HOH HOH 324 A HOH 25 3 HOH HOH 325 A HOH 26 3 HOH HOH 326 A HOH 27 3 HOH HOH 327 A HOH 28 3 HOH HOH 328 A HOH 29 3 HOH HOH 329 A HOH 30 3 HOH HOH 330 A HOH 31 3 HOH HOH 331 A HOH 32 3 HOH HOH 332 A HOH 33 3 HOH HOH 333 A HOH 34 3 HOH HOH 334 A HOH 35 3 HOH HOH 335 A HOH 36 3 HOH HOH 336 A HOH 37 3 HOH HOH 337 A HOH 38 3 HOH HOH 338 A HOH 39 3 HOH HOH 339 A HOH 40 3 HOH HOH 340 A HOH 41 3 HOH HOH 341 A HOH 42 3 HOH HOH 342 A HOH 43 3 HOH HOH 343 A HOH 44 3 HOH HOH 344 A HOH 45 3 HOH HOH 345 A HOH 46 3 HOH HOH 346 A HOH 47 3 HOH HOH 347 A HOH 48 3 HOH HOH 348 A HOH 49 3 HOH HOH 349 A HOH 50 3 HOH HOH 350 A HOH 51 3 HOH HOH 351 A HOH 52 3 HOH HOH 352 A HOH 53 3 HOH HOH 353 A HOH 54 3 HOH HOH 354 A HOH 55 3 HOH HOH 355 A HOH 56 3 HOH HOH 356 A HOH 57 3 HOH HOH 357 A HOH 58 3 HOH HOH 358 A HOH 59 3 HOH HOH 359 A HOH 60 3 HOH HOH 360 A HOH 61 3 HOH HOH 361 A HOH 62 3 HOH HOH 362 A HOH 63 3 HOH HOH 363 A HOH 64 3 HOH HOH 364 A HOH 65 3 HOH HOH 365 A HOH 66 3 HOH HOH 366 A HOH 67 3 HOH HOH 367 A HOH 68 3 HOH HOH 368 A HOH 69 3 HOH HOH 369 A ALA 1 n 1 GLY 1 A THR 2 n 2 THR 2 A LEU 3 n 3 LEU 3 A ARG 4 n 4 ARG 4 A PHE 5 n 5 PHE 5 A PHE 6 n 6 PHE 6 A THR 7 n 7 THR 7 A VAL 8 n 8 VAL 8 A THR 9 n 9 THR 9 A ASP 10 n 10 ASP 10 A GLU 11 n 11 GLU 11 A TYR 12 n 12 TYR 12 A ILE 13 n 13 ILE 13 A ALA 14 n 14 ALA 14 A TYR 15 n 15 TYR 15 A LEU 16 n 16 LEU 16 A ARG 17 n 17 ARG 17 A LYS 18 n 18 LYS 18 A PHE 19 n 19 PHE 19 A GLU 20 n 20 GLU 20 A SER 21 n 21 SER 21 A LYS 22 n 22 LYS 22 A VAL 23 n 23 VAL 23 A HIS 24 n 24 HIS 24 A TYR 25 n 25 TYR 25 A GLN 26 n 26 GLN 26 A TYR 27 n 27 TYR 27 A GLU 28 n 28 GLU 28 A ASN 29 n 29 ASN 29 A ASN 30 n 30 ASN 30 A ALA 31 n 31 ALA 31 A SER 32 n 32 SER 32 A THR 33 n 33 THR 33 A TYR 34 n 34 TYR 34 A VAL 35 n 35 VAL 35 A GLY 36 n 36 GLY 36 A VAL 37 n 37 VAL 37 A VAL 38 n 38 VAL 38 A LEU 39 n 39 LEU 39 A LYS 40 n 40 LYS 40 A LYS 41 n 41 LYS 41 A ASN 42 n 42 ASN 42 A ASP 43 n 43 ASP 43 A PHE 44 n 44 PHE 44 A ASN 45 n 45 ASN 45 A TYR 46 n 46 TYR 46 A PHE 47 n 47 PHE 47 A ILE 48 n 48 ILE 48 A PRO 49 n 49 PRO 49 A LEU 50 n 50 LEU 50 A LEU 51 n 51 LEU 51 A SER 52 n 52 SER 52 A TYR 53 n 53 TYR 53 A n 54 54 A n 55 55 A n 56 56 A ASN 57 n 57 ASN 57 A PRO 58 n 58 PRO 58 A GLU 59 n 59 GLU 59 A LYS 60 n 60 LYS 60 A ASP 61 n 61 ASP 61 A LYS 62 n 62 LYS 62 A ALA 63 n 63 ALA 63 A MET 64 n 64 MET 64 A LYS 65 n 65 LYS 65 A LYS 66 n 66 LYS 66 A ARG 67 n 67 ARG 67 A SER 68 n 68 SER 68 A ARG 69 n 69 ARG 69 A ILE 70 n 70 ILE 70 A VAL 71 n 71 VAL 71 A THR 72 n 72 THR 72 A ARG 73 n 73 ARG 73 A LEU 74 n 74 LEU 74 A PHE 75 n 75 PHE 75 A GLU 76 n 76 GLU 76 A ILE 77 n 77 ILE 77 A GLY 78 n 78 GLY 78 A ASN 79 n 79 ASN 79 A ILE 80 n 80 ILE 80 A ASN 81 n 81 ASN 81 A ASN 82 n 82 ASN 82 A PRO 83 n 83 PRO 83 A LEU 84 n 84 LEU 84 A GLY 85 n 85 GLY 85 A TYR 86 n 86 TYR 86 A LEU 87 n 87 LEU 87 A LEU 88 n 88 LEU 88 A HIS 89 n 89 HIS 89 A HIS 90 n 90 HIS 90 A ASN 91 n 91 ASN 91 A MET 92 n 92 MET 92 A ILE 93 n 93 ILE 93 A PRO 94 n 94 PRO 94 A VAL 95 n 95 VAL 95 A PRO 96 n 96 PRO 96 A ASP 97 n 97 ASP 97 A SER 98 n 98 SER 98 A GLU 99 n 99 GLU 99 A LEU 100 n 100 LEU 100 A ILE 101 n 101 ILE 101 A PRO 102 n 102 PRO 102 A LEU 103 n 103 LEU 103 A PRO 104 n 104 PRO 104 A LEU 105 n 105 LEU 105 A ASP 106 n 106 ASP 106 A LEU 107 n 107 LEU 107 A LYS 108 n 108 LYS 108 A LYS 109 n 109 LYS 109 A PRO 110 n 110 PRO 110 A LYS 111 n 111 LYS 111 A HIS 112 n 112 HIS 112 A LYS 113 n 113 LYS 113 A MET 114 n 114 MET 114 A MET 115 n 115 MET 115 A GLN 116 n 116 GLN 116 A LYS 117 n 117 LYS 117 A GLN 118 n 118 GLN 118 A LEU 119 n 119 LEU 119 A ILE 120 n 120 ILE 120 A TYR 121 n 121 TYR 121 A MET 122 n 122 MET 122 A LYS 123 n 123 LYS 123 A SER 124 n 124 SER 124 A ILE 125 n 125 ILE 125 A SER 126 n 126 SER 126 A GLU 127 n 127 GLU 127 A LYS 128 n 128 LYS 128 A ILE 129 n 129 ILE 129 A GLU 130 n 130 GLU 130 A ASN 131 n 131 ASN 131 A LYS 132 n 132 LYS 132 A SER 133 n 133 SER 133 A GLU 134 n 134 GLU 134 A VAL 135 n 135 VAL 135 A VAL 136 n 136 VAL 136 A TYR 137 n 137 TYR 137 A ARG 138 n 138 ARG 138 A LYS 139 n 139 LYS 139 A ALA 140 n 140 ALA 140 A ALA 141 n 141 ALA 141 A HIS 142 n 142 HIS 142 A GLU 143 n 143 GLU 143 A LYS 144 n 144 LYS 144 A ASP 145 n 145 ASP 145 A GLY 146 n 146 GLY 146 A TYR 147 n 147 TYR 147 A TYR 148 n 148 TYR 148 A LEU 149 n 149 LEU 149 A LYS 150 n 150 LYS 150 A PHE 151 n 151 PHE 151 A SER 152 n 152 SER 152 A CYS 153 n 153 CYS 153 A ASP 154 n 154 ASP 154 A PHE 155 n 155 PHE 155 A LYS 156 n 156 LYS 156 A LEU 157 n 157 LEU 157 A LEU 158 n 158 LEU 158 A GLU 159 n 159 GLU 159 A ALA 160 n 160 ALA 160 A LYS 161 n 161 LYS 161 A ALA 162 n 162 ALA 162 A THR 163 n 163 THR 163 A LEU 164 n 164 LEU 164 A TYR 165 n 165 TYR 165 A SER 166 n 166 SER 166 A LYS 167 n 167 LYS 167 A LYS 168 n 168 LYS 168 A n 169 169 A n 170 170 A n 171 171 A n 172 172 A 0.5346 -0.1421 0.1281 0.0035 -0.0091 0.1401 0.0034 0.0205 -0.0105 0.0346 -0.0029 -0.0111 0.0164 -0.0004 -0.0005 -0.0153 -0.0178 0.0063 0.0060 -0.0282 -0.0027 refined -4.2370 9.7849 -8.4216 X-RAY DIFFRACTION 0.1613 0.0871 -0.0568 0.3875 -0.1545 0.3830 -0.0029 0.0161 0.0139 0.0236 -0.0157 0.0000 -0.0024 -0.0143 0.0186 0.0082 -0.0038 0.0308 -0.0168 -0.0191 0.0187 refined -11.6035 12.1350 -3.6199 X-RAY DIFFRACTION 0.1406 -0.0553 -0.3807 0.0000 -0.4888 0.3075 -0.0004 -0.0013 -0.0027 -0.0019 0.0050 -0.0108 -0.0077 0.0019 -0.0045 -0.0071 0.0615 -0.0127 0.0209 0.0126 0.0115 refined 4.6029 15.8531 -10.3077 X-RAY DIFFRACTION 0.1954 0.3321 -0.0618 0.3649 0.8137 0.2286 -0.0020 0.0201 0.0047 -0.0042 0.0214 0.0075 0.0064 -0.0228 -0.0194 -0.0081 0.0079 -0.0156 -0.0048 -0.0096 0.0087 refined -7.9765 19.0957 -13.6104 X-RAY DIFFRACTION 0.0636 -0.0439 0.0587 0.0000 -0.1771 0.0003 0.0000 -0.0023 0.0025 0.0052 -0.0039 0.0049 0.0003 -0.0081 0.0039 -0.0243 0.0129 -0.0394 0.0163 0.0223 0.0010 refined -14.6242 31.1730 -12.7675 X-RAY DIFFRACTION 0.3186 0.4046 0.0407 0.0410 -0.4669 0.1217 0.0061 0.0066 0.0020 -0.0054 -0.0047 0.0243 -0.0076 0.0030 -0.0014 -0.0198 -0.0051 -0.0229 0.0256 0.0380 -0.0036 refined -8.3530 27.3597 -21.7348 X-RAY DIFFRACTION 0.2875 0.0482 -0.3700 0.3091 -0.1493 0.2779 0.0021 -0.0023 0.0168 -0.0208 -0.0072 0.0173 -0.0135 -0.0042 0.0051 -0.0233 0.0069 0.0045 0.0141 0.0229 0.0057 refined -9.1418 24.1527 -15.8550 X-RAY DIFFRACTION 0.0817 -0.5586 0.0298 0.0000 0.3223 0.0341 -0.0039 0.0036 0.0110 0.0148 -0.0004 -0.0137 0.0133 0.0053 0.0043 0.0018 0.0183 -0.0318 -0.0219 -0.0305 0.0214 refined -1.4932 7.3490 -10.2771 X-RAY DIFFRACTION 0.3186 0.1042 0.3329 0.3591 -0.1747 0.0000 0.0009 0.0059 -0.0002 0.0073 0.0005 0.0118 -0.0041 -0.0190 -0.0014 -0.0066 -0.0060 -0.0793 -0.0135 -0.0113 0.0399 refined -13.7104 10.3151 -25.7781 X-RAY DIFFRACTION 0.0737 0.1287 -0.1610 0.0018 -0.4035 0.2394 0.0048 -0.0021 -0.0018 -0.0368 0.0023 0.0019 0.0030 0.0105 -0.0071 0.0122 -0.0126 -0.0130 -0.0280 0.0161 0.0070 refined -2.2191 21.6364 -23.4358 X-RAY DIFFRACTION 0.0656 -0.1076 0.2472 0.2088 -0.0807 0.0209 -0.0012 -0.0013 -0.0169 0.0067 0.0092 -0.0094 0.0007 0.0146 -0.0079 -0.0263 -0.0124 -0.0141 -0.0145 0.0181 0.0527 refined 4.5887 27.1871 -7.8214 X-RAY DIFFRACTION 0.0465 -0.1037 0.5807 0.0214 0.1399 0.0181 0.0023 -0.0009 0.0069 0.0200 0.0050 -0.0118 -0.0004 0.0032 -0.0073 -0.0077 0.0234 -0.0404 0.0221 -0.0192 -0.0246 refined -2.0543 29.2585 -1.0962 X-RAY DIFFRACTION 0.0070 0.2251 0.6630 0.1256 -0.2637 0.1130 -0.0017 -0.0110 -0.0170 0.0114 0.0010 -0.0034 0.0040 0.0073 0.0007 0.0305 0.0221 -0.1095 0.0120 0.0192 0.0014 refined 3.5622 10.5932 2.3426 X-RAY DIFFRACTION A 1 A 17 X-RAY DIFFRACTION 1 {A|1 - A|17} A 18 A 33 X-RAY DIFFRACTION 2 {A|18 - A|33} A 34 A 44 X-RAY DIFFRACTION 3 {A|34 - A|44} A 45 A 57 X-RAY DIFFRACTION 4 {A|45 - A|57} A 58 A 68 X-RAY DIFFRACTION 5 {A|58 - A|68} A 69 A 80 X-RAY DIFFRACTION 6 {A|69 - A|80} A 81 A 92 X-RAY DIFFRACTION 7 {A|81 - A|92} A 93 A 104 X-RAY DIFFRACTION 8 {A|93 - A|104} A 105 A 116 X-RAY DIFFRACTION 9 {A|105 - A|116} A 117 A 129 X-RAY DIFFRACTION 10 {A|117 - A|129} A 130 A 142 X-RAY DIFFRACTION 11 {A|130 - A|142} A 143 A 155 X-RAY DIFFRACTION 12 {A|143 - A|155} A 156 A 168 X-RAY DIFFRACTION 13 {A|156 - A|168} author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 74 A N LEU 74 A O GLY 85 A O GLY 85 A O TYR 86 A O TYR 86 A N LEU 51 A N LEU 51 A N PHE 47 A N PHE 47 A O ILE 93 A O ILE 93 A N LEU 74 A N LEU 74 A O GLY 85 A O GLY 85 A O TYR 86 A O TYR 86 A N LEU 51 A N LEU 51 A O LEU 50 A O LEU 50 A N THR 33 A N THR 33 A O TYR 34 A O TYR 34 A N PHE 6 A N PHE 6 A N THR 7 A N THR 7 A O ILE 101 A O ILE 101 1 A CG LYS 41 A CG LYS 41 1 Y 1 A CD LYS 41 A CD LYS 41 1 Y 1 A CE LYS 41 A CE LYS 41 1 Y 1 A NZ LYS 41 A NZ LYS 41 1 Y 1 A CG ASN 57 A CG ASN 57 1 Y 1 A OD1 ASN 57 A OD1 ASN 57 1 Y 1 A ND2 ASN 57 A ND2 ASN 57 1 Y 1 A CG ASP 61 A CG ASP 61 1 Y 1 A OD1 ASP 61 A OD1 ASP 61 1 Y 1 A OD2 ASP 61 A OD2 ASP 61 1 Y 1 A CG LYS 62 A CG LYS 62 1 Y 1 A CD LYS 62 A CD LYS 62 1 Y 1 A CE LYS 62 A CE LYS 62 1 Y 1 A NZ LYS 62 A NZ LYS 62 1 Y 1 A CG LYS 66 A CG LYS 66 1 Y 1 A CD LYS 66 A CD LYS 66 1 Y 1 A CE LYS 66 A CE LYS 66 1 Y 1 A NZ LYS 66 A NZ LYS 66 1 Y 1 A CG LYS 108 A CG LYS 108 1 Y 1 A CD LYS 108 A CD LYS 108 1 Y 1 A CE LYS 108 A CE LYS 108 1 Y 1 A NZ LYS 108 A NZ LYS 108 1 Y 1 A LYS 54 A LYS 54 1 Y 1 A LYS 55 A LYS 55 1 Y 1 A GLY 56 A GLY 56 1 Y 1 A SER 169 A SER 169 1 Y 1 A THR 170 A THR 170 1 Y 1 A PHE 171 A PHE 171 1 Y 1 A GLN 172 A GLN 172 1 Y 1 A GLU 28 37.87 -89.48 1 A PRO 58 -39.10 -16.18 1 A ASN 79 -167.40 53.23 1 A LEU 88 -102.89 77.48 38.47 6.2090 0.0000 0.0000 5.4018 0.0000 -11.6108 0.9300 0.9239 0.2232 0.1937 0.1958 0.1958 2.16 27.67 694 9880 9880 7.02 RANDOM 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 2XDD Engh & Huber 0.272 2.16 27.67 69 1440 18 0 1353 0.009 1397 HARMONIC 2.00 1.18 1876 HARMONIC 2.00 0 493 SINUSOIDAL 2.00 0 28 HARMONIC 2.00 0 195 HARMONIC 5.00 0 1397 HARMONIC 20.00 3.77 23.96 0 177 SEMIHARMONIC 5.00 0 1651 SEMIHARMONIC 4.00 0.3178 0.2274 0.2327 2.42 173 2561 2734 2734 5 6.33 35.49 2.16 45 4GLK 9880 9880 0 0 0.090 1 17.1 13.7 99.7 0.6 2.16 2.22 3.7 753 1 13.1 99.6 data collection DNA phasing MOLREP refinement BUSTER 2.9.2 data reduction XDS data scaling XSCALE Structure and activity of AbiQ, a lactococcal anti-phage endoribonuclease belonging to the type-III toxin-antitoxin system 1 N N 2 N N 2 N N 2 N N 3 N N A THR 9 A THR 9 HELX_P A ARG 17 A ARG 17 1 1 9 A PRO 58 A PRO 58 HELX_P A ARG 67 A ARG 67 1 2 10 A HIS 90 A HIS 90 HELX_P A MET 92 A MET 92 5 3 3 A PRO 96 A PRO 96 HELX_P A SER 98 A SER 98 5 4 3 A LYS 109 A LYS 109 HELX_P A ILE 125 A ILE 125 1 5 17 A ILE 125 A ILE 125 HELX_P A HIS 142 A HIS 142 1 6 18 A ASP 145 A ASP 145 HELX_P A SER 152 A SER 152 1 7 8 A ASP 154 A ASP 154 HELX_P A LYS 167 A LYS 167 1 8 14 HYDROLASE Alpha Beta, endonuclease, RNA antiQ, HYDROLASE A GLY 36 A GLY 36 1 A VAL 37 A VAL 37 -1.47 A LYS 41 A LYS 41 1 A ASN 42 A ASN 42 -5.24 Q9ZJ19_9LACT UNP 1 13 Q9ZJ19 TLRFFTVTDEYIAYLRKFESKVHYQYENNASTYVGVVLKKNDFNYFIPLSSYKKGNPEKDKAMKKRSRIVTRLFEIGNIN NPLGYLLHHNMIPVPDSELIPLPLDLKKPKHKMMQKQLIYMKSISEKIENKSEVVYRKAAHEKDGYYLKFSCDFKLLEAK ATLYSKKSTFQ 13 183 4GLK 2 172 Q9ZJ19 A 1 2 172 1 expression tag GLY 1 4GLK A Q9ZJ19 UNP 1 1 SER engineered mutation LEU 51 4GLK A Q9ZJ19 UNP 62 51 4 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 71 A VAL 71 A GLU 76 A GLU 76 A ASN 79 A ASN 79 A LEU 88 A LEU 88 A ASN 45 A ASN 45 A SER 52 A SER 52 A ILE 93 A ILE 93 A PRO 94 A PRO 94 A VAL 71 A VAL 71 A GLU 76 A GLU 76 A ASN 79 A ASN 79 A LEU 88 A LEU 88 A ASN 45 A ASN 45 A SER 52 A SER 52 A THR 33 A THR 33 A LYS 40 A LYS 40 A ARG 4 A ARG 4 A VAL 8 A VAL 8 A LEU 100 A LEU 100 A PRO 102 A PRO 102 BINDING SITE FOR RESIDUE GOL A 201 A GOL 201 Software 6 BINDING SITE FOR RESIDUE GOL A 202 A GOL 202 Software 7 BINDING SITE FOR RESIDUE GOL A 203 A GOL 203 Software 9 A ARG 73 A ARG 73 6 3_544 A PHE 75 A PHE 75 6 3_544 A ASP 97 A ASP 97 6 1_555 A TYR 121 A TYR 121 6 3_544 A LYS 128 A LYS 128 6 3_544 A GOL 203 D GOL 6 1_555 A LEU 3 A LEU 3 7 1_555 A ARG 4 A ARG 4 7 1_555 A ARG 69 A ARG 69 7 3_544 A LEU 119 A LEU 119 7 1_555 A LYS 123 A LYS 123 7 1_555 A LYS 139 A LYS 139 7 3_544 A TYR 148 A TYR 148 7 3_544 A ARG 4 A ARG 4 9 1_555 A PHE 6 A PHE 6 9 1_555 A SER 68 A SER 68 9 3_544 A PRO 102 A PRO 102 9 1_555 A LYS 128 A LYS 128 9 3_544 A LYS 132 A LYS 132 9 3_544 A GOL 201 B GOL 9 1_555 A HOH 346 E HOH 9 3_544 A HOH 368 E HOH 9 1_555 19 P 21 21 21