0.017159
0.000000
0.000000
0.000000
0.007342
0.000000
0.000000
0.000000
0.029742
0.00000
0.00000
0.00000
Dong, A.
Guan, X.
Huang, H.
Tempel, W.
Gu, J.
Sidhu, S.
Bountra, C.
Arrowsmith, C.H.
Edwards, A.M.
Tong, Y.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.000
90.000
90.000
58.279
136.203
33.623
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
UNKNOWN ATOM OR ION
non-polymer
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
S
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
N
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
S
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
Y
234
N
C
Y
235
N
C
Y
236
N
C
Y
237
N
C
Y
238
N
C
Y
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
O
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
R
C
N
288
N
O
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
N
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
N
338
N
O
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
Y
227
N
doub
Y
228
N
sing
Y
229
N
sing
N
230
N
sing
Y
231
N
doub
N
232
N
sing
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
Y
296
N
doub
Y
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
Y
324
N
doub
Y
325
N
sing
Y
326
N
sing
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
to be published
0353
Crystal structure of the SH3 Domain of DNMBP protein [Homo sapiens]
10.2210/pdb4glm/pdb
pdb_00004glm
100
1
CCD
2012-07-29
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.97931
1.0
19-ID
APS
0.97931
SYNCHROTRON
APS BEAMLINE 19-ID
7751.870
Dynamin-binding protein
UNP residues 246-301
4
man
polymer
UNKNOWN ATOM OR ION
18
syn
non-polymer
18.015
water
135
nat
water
Scaffold protein Tuba
no
no
GGAAQPAMAQGALTYGVALYRFQALEPNELDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCPAAA
GGAAQPAMAQGALTYGVALYRFQALEPNELDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCPAAA
A,B,C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
DNMBP, KIAA1010
9606
Homo sapiens
511693
Escherichia coli
BL21-V2R-pRARE2
plasmid
pHH0239
1
2.15
42.84
8.5
5% PEG 8000, 0.2 M NaCl, and 0.1 M Tris 8.5, vapor diffusion hanging drop, temperature 291K
291
Structural Genomics Consortium
SGC
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Data collection
Database references
Refinement description
1
0
2012-11-21
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2012-08-14
REL
REL
UNX
UNKNOWN ATOM OR ION
HOH
water
2DRK
PDB entry 2DRK
PDB
experimental model
UNX
1001
2
UNX
UNX
1001
A
UNX
1002
2
UNX
UNX
1002
A
UNX
1003
2
UNX
UNX
1003
A
UNX
1010
2
UNX
UNX
1004
A
UNX
1011
2
UNX
UNX
1005
A
UNX
1013
2
UNX
UNX
1006
A
UNX
1016
2
UNX
UNX
1007
A
UNX
1017
2
UNX
UNX
1008
A
UNX
1007
2
UNX
UNX
401
B
UNX
1008
2
UNX
UNX
402
B
UNX
1012
2
UNX
UNX
403
B
UNX
1014
2
UNX
UNX
404
B
UNX
1015
2
UNX
UNX
405
B
UNX
1018
2
UNX
UNX
406
B
UNX
1004
2
UNX
UNX
401
C
UNX
1005
2
UNX
UNX
402
C
UNX
1006
2
UNX
UNX
403
C
UNX
1009
2
UNX
UNX
401
D
HOH
2
3
HOH
HOH
1101
A
HOH
3
3
HOH
HOH
1102
A
HOH
4
3
HOH
HOH
1103
A
HOH
5
3
HOH
HOH
1104
A
HOH
8
3
HOH
HOH
1105
A
HOH
10
3
HOH
HOH
1106
A
HOH
11
3
HOH
HOH
1107
A
HOH
12
3
HOH
HOH
1108
A
HOH
15
3
HOH
HOH
1109
A
HOH
16
3
HOH
HOH
1110
A
HOH
23
3
HOH
HOH
1111
A
HOH
29
3
HOH
HOH
1112
A
HOH
30
3
HOH
HOH
1113
A
HOH
34
3
HOH
HOH
1114
A
HOH
37
3
HOH
HOH
1115
A
HOH
43
3
HOH
HOH
1116
A
HOH
44
3
HOH
HOH
1117
A
HOH
49
3
HOH
HOH
1118
A
HOH
50
3
HOH
HOH
1119
A
HOH
52
3
HOH
HOH
1120
A
HOH
56
3
HOH
HOH
1121
A
HOH
62
3
HOH
HOH
1122
A
HOH
64
3
HOH
HOH
1123
A
HOH
71
3
HOH
HOH
1124
A
HOH
74
3
HOH
HOH
1125
A
HOH
77
3
HOH
HOH
1126
A
HOH
82
3
HOH
HOH
1127
A
HOH
83
3
HOH
HOH
1128
A
HOH
85
3
HOH
HOH
1129
A
HOH
88
3
HOH
HOH
1130
A
HOH
91
3
HOH
HOH
1131
A
HOH
92
3
HOH
HOH
1132
A
HOH
93
3
HOH
HOH
1133
A
HOH
102
3
HOH
HOH
1134
A
HOH
106
3
HOH
HOH
1135
A
HOH
107
3
HOH
HOH
1136
A
HOH
108
3
HOH
HOH
1137
A
HOH
115
3
HOH
HOH
1138
A
HOH
116
3
HOH
HOH
1139
A
HOH
117
3
HOH
HOH
1140
A
HOH
127
3
HOH
HOH
1141
A
HOH
128
3
HOH
HOH
1142
A
HOH
129
3
HOH
HOH
1143
A
HOH
1
3
HOH
HOH
501
B
HOH
6
3
HOH
HOH
502
B
HOH
7
3
HOH
HOH
503
B
HOH
13
3
HOH
HOH
504
B
HOH
14
3
HOH
HOH
505
B
HOH
17
3
HOH
HOH
506
B
HOH
18
3
HOH
HOH
507
B
HOH
19
3
HOH
HOH
508
B
HOH
21
3
HOH
HOH
509
B
HOH
24
3
HOH
HOH
510
B
HOH
25
3
HOH
HOH
511
B
HOH
26
3
HOH
HOH
512
B
HOH
27
3
HOH
HOH
513
B
HOH
28
3
HOH
HOH
514
B
HOH
32
3
HOH
HOH
515
B
HOH
35
3
HOH
HOH
516
B
HOH
36
3
HOH
HOH
517
B
HOH
38
3
HOH
HOH
518
B
HOH
40
3
HOH
HOH
519
B
HOH
41
3
HOH
HOH
520
B
HOH
42
3
HOH
HOH
521
B
HOH
45
3
HOH
HOH
522
B
HOH
51
3
HOH
HOH
523
B
HOH
57
3
HOH
HOH
524
B
HOH
58
3
HOH
HOH
525
B
HOH
59
3
HOH
HOH
526
B
HOH
60
3
HOH
HOH
527
B
HOH
63
3
HOH
HOH
528
B
HOH
68
3
HOH
HOH
529
B
HOH
69
3
HOH
HOH
530
B
HOH
73
3
HOH
HOH
531
B
HOH
76
3
HOH
HOH
532
B
HOH
78
3
HOH
HOH
533
B
HOH
79
3
HOH
HOH
534
B
HOH
84
3
HOH
HOH
535
B
HOH
87
3
HOH
HOH
536
B
HOH
94
3
HOH
HOH
537
B
HOH
95
3
HOH
HOH
538
B
HOH
96
3
HOH
HOH
539
B
HOH
97
3
HOH
HOH
540
B
HOH
98
3
HOH
HOH
541
B
HOH
99
3
HOH
HOH
542
B
HOH
100
3
HOH
HOH
543
B
HOH
101
3
HOH
HOH
544
B
HOH
103
3
HOH
HOH
545
B
HOH
104
3
HOH
HOH
546
B
HOH
109
3
HOH
HOH
547
B
HOH
110
3
HOH
HOH
548
B
HOH
125
3
HOH
HOH
549
B
HOH
130
3
HOH
HOH
550
B
HOH
131
3
HOH
HOH
551
B
HOH
132
3
HOH
HOH
552
B
HOH
134
3
HOH
HOH
553
B
HOH
9
3
HOH
HOH
501
C
HOH
31
3
HOH
HOH
502
C
HOH
53
3
HOH
HOH
503
C
HOH
54
3
HOH
HOH
504
C
HOH
61
3
HOH
HOH
505
C
HOH
65
3
HOH
HOH
506
C
HOH
66
3
HOH
HOH
507
C
HOH
75
3
HOH
HOH
508
C
HOH
81
3
HOH
HOH
509
C
HOH
86
3
HOH
HOH
510
C
HOH
111
3
HOH
HOH
511
C
HOH
112
3
HOH
HOH
512
C
HOH
114
3
HOH
HOH
513
C
HOH
123
3
HOH
HOH
514
C
HOH
20
3
HOH
HOH
501
D
HOH
22
3
HOH
HOH
502
D
HOH
33
3
HOH
HOH
503
D
HOH
39
3
HOH
HOH
504
D
HOH
46
3
HOH
HOH
505
D
HOH
47
3
HOH
HOH
506
D
HOH
48
3
HOH
HOH
507
D
HOH
55
3
HOH
HOH
508
D
HOH
67
3
HOH
HOH
509
D
HOH
70
3
HOH
HOH
510
D
HOH
72
3
HOH
HOH
511
D
HOH
80
3
HOH
HOH
512
D
HOH
89
3
HOH
HOH
513
D
HOH
90
3
HOH
HOH
514
D
HOH
105
3
HOH
HOH
515
D
HOH
113
3
HOH
HOH
516
D
HOH
118
3
HOH
HOH
517
D
HOH
119
3
HOH
HOH
518
D
HOH
120
3
HOH
HOH
519
D
HOH
121
3
HOH
HOH
520
D
HOH
122
3
HOH
HOH
521
D
HOH
124
3
HOH
HOH
522
D
HOH
126
3
HOH
HOH
523
D
HOH
133
3
HOH
HOH
524
D
HOH
135
3
HOH
HOH
525
D
n
1
233
A
n
2
234
A
n
3
235
A
n
4
236
A
n
5
237
A
n
6
238
A
n
7
239
A
n
8
240
A
n
9
241
A
n
10
242
A
n
11
243
A
n
12
244
A
LEU
245
n
13
LEU
245
A
THR
246
n
14
THR
246
A
TYR
247
n
15
TYR
247
A
GLY
248
n
16
GLY
248
A
VAL
249
n
17
VAL
249
A
ALA
250
n
18
ALA
250
A
LEU
251
n
19
LEU
251
A
TYR
252
n
20
TYR
252
A
ARG
253
n
21
ARG
253
A
PHE
254
n
22
PHE
254
A
GLN
255
n
23
GLN
255
A
ALA
256
n
24
ALA
256
A
LEU
257
n
25
LEU
257
A
GLU
258
n
26
GLU
258
A
PRO
259
n
27
PRO
259
A
ASN
260
n
28
ASN
260
A
GLU
261
n
29
GLU
261
A
LEU
262
n
30
LEU
262
A
ASP
263
n
31
ASP
263
A
PHE
264
n
32
PHE
264
A
GLU
265
n
33
GLU
265
A
VAL
266
n
34
VAL
266
A
GLY
267
n
35
GLY
267
A
ASP
268
n
36
ASP
268
A
LYS
269
n
37
LYS
269
A
ILE
270
n
38
ILE
270
A
ARG
271
n
39
ARG
271
A
ILE
272
n
40
ILE
272
A
LEU
273
n
41
LEU
273
A
ALA
274
n
42
ALA
274
A
THR
275
n
43
THR
275
A
LEU
276
n
44
LEU
276
A
GLU
277
n
45
GLU
277
A
ASP
278
n
46
ASP
278
A
GLY
279
n
47
GLY
279
A
TRP
280
n
48
TRP
280
A
LEU
281
n
49
LEU
281
A
GLU
282
n
50
GLU
282
A
GLY
283
n
51
GLY
283
A
SER
284
n
52
SER
284
A
LEU
285
n
53
LEU
285
A
LYS
286
n
54
LYS
286
A
GLY
287
n
55
GLY
287
A
ARG
288
n
56
ARG
288
A
THR
289
n
57
THR
289
A
GLY
290
n
58
GLY
290
A
ILE
291
n
59
ILE
291
A
PHE
292
n
60
PHE
292
A
PRO
293
n
61
PRO
293
A
TYR
294
n
62
TYR
294
A
ARG
295
n
63
ARG
295
A
PHE
296
n
64
PHE
296
A
VAL
297
n
65
VAL
297
A
LYS
298
n
66
LYS
298
A
LEU
299
n
67
LEU
299
A
CYS
300
n
68
CYS
300
A
PRO
301
n
69
PRO
301
A
ALA
302
n
70
ALA
302
A
n
71
303
A
n
72
304
A
n
1
233
B
n
2
234
B
n
3
235
B
n
4
236
B
n
5
237
B
n
6
238
B
n
7
239
B
n
8
240
B
n
9
241
B
n
10
242
B
n
11
243
B
n
12
244
B
LEU
245
n
13
LEU
245
B
THR
246
n
14
THR
246
B
TYR
247
n
15
TYR
247
B
GLY
248
n
16
GLY
248
B
VAL
249
n
17
VAL
249
B
ALA
250
n
18
ALA
250
B
LEU
251
n
19
LEU
251
B
TYR
252
n
20
TYR
252
B
ARG
253
n
21
ARG
253
B
PHE
254
n
22
PHE
254
B
GLN
255
n
23
GLN
255
B
ALA
256
n
24
ALA
256
B
LEU
257
n
25
LEU
257
B
GLU
258
n
26
GLU
258
B
PRO
259
n
27
PRO
259
B
ASN
260
n
28
ASN
260
B
GLU
261
n
29
GLU
261
B
LEU
262
n
30
LEU
262
B
ASP
263
n
31
ASP
263
B
PHE
264
n
32
PHE
264
B
GLU
265
n
33
GLU
265
B
VAL
266
n
34
VAL
266
B
GLY
267
n
35
GLY
267
B
ASP
268
n
36
ASP
268
B
LYS
269
n
37
LYS
269
B
ILE
270
n
38
ILE
270
B
ARG
271
n
39
ARG
271
B
ILE
272
n
40
ILE
272
B
LEU
273
n
41
LEU
273
B
ALA
274
n
42
ALA
274
B
THR
275
n
43
THR
275
B
LEU
276
n
44
LEU
276
B
GLU
277
n
45
GLU
277
B
ASP
278
n
46
ASP
278
B
GLY
279
n
47
GLY
279
B
TRP
280
n
48
TRP
280
B
LEU
281
n
49
LEU
281
B
GLU
282
n
50
GLU
282
B
GLY
283
n
51
GLY
283
B
SER
284
n
52
SER
284
B
LEU
285
n
53
LEU
285
B
LYS
286
n
54
LYS
286
B
GLY
287
n
55
GLY
287
B
ARG
288
n
56
ARG
288
B
THR
289
n
57
THR
289
B
GLY
290
n
58
GLY
290
B
ILE
291
n
59
ILE
291
B
PHE
292
n
60
PHE
292
B
PRO
293
n
61
PRO
293
B
TYR
294
n
62
TYR
294
B
ARG
295
n
63
ARG
295
B
PHE
296
n
64
PHE
296
B
VAL
297
n
65
VAL
297
B
LYS
298
n
66
LYS
298
B
LEU
299
n
67
LEU
299
B
CYS
300
n
68
CYS
300
B
PRO
301
n
69
PRO
301
B
n
70
302
B
n
71
303
B
n
72
304
B
n
1
233
C
n
2
234
C
n
3
235
C
n
4
236
C
n
5
237
C
n
6
238
C
n
7
239
C
n
8
240
C
n
9
241
C
n
10
242
C
n
11
243
C
n
12
244
C
n
13
245
C
THR
246
n
14
THR
246
C
TYR
247
n
15
TYR
247
C
GLY
248
n
16
GLY
248
C
VAL
249
n
17
VAL
249
C
ALA
250
n
18
ALA
250
C
LEU
251
n
19
LEU
251
C
TYR
252
n
20
TYR
252
C
ARG
253
n
21
ARG
253
C
PHE
254
n
22
PHE
254
C
GLN
255
n
23
GLN
255
C
ALA
256
n
24
ALA
256
C
LEU
257
n
25
LEU
257
C
GLU
258
n
26
GLU
258
C
PRO
259
n
27
PRO
259
C
ASN
260
n
28
ASN
260
C
GLU
261
n
29
GLU
261
C
LEU
262
n
30
LEU
262
C
ASP
263
n
31
ASP
263
C
PHE
264
n
32
PHE
264
C
GLU
265
n
33
GLU
265
C
VAL
266
n
34
VAL
266
C
GLY
267
n
35
GLY
267
C
ASP
268
n
36
ASP
268
C
LYS
269
n
37
LYS
269
C
ILE
270
n
38
ILE
270
C
ARG
271
n
39
ARG
271
C
ILE
272
n
40
ILE
272
C
LEU
273
n
41
LEU
273
C
ALA
274
n
42
ALA
274
C
THR
275
n
43
THR
275
C
LEU
276
n
44
LEU
276
C
GLU
277
n
45
GLU
277
C
ASP
278
n
46
ASP
278
C
GLY
279
n
47
GLY
279
C
TRP
280
n
48
TRP
280
C
LEU
281
n
49
LEU
281
C
GLU
282
n
50
GLU
282
C
GLY
283
n
51
GLY
283
C
SER
284
n
52
SER
284
C
LEU
285
n
53
LEU
285
C
LYS
286
n
54
LYS
286
C
GLY
287
n
55
GLY
287
C
ARG
288
n
56
ARG
288
C
THR
289
n
57
THR
289
C
GLY
290
n
58
GLY
290
C
ILE
291
n
59
ILE
291
C
PHE
292
n
60
PHE
292
C
PRO
293
n
61
PRO
293
C
TYR
294
n
62
TYR
294
C
ARG
295
n
63
ARG
295
C
PHE
296
n
64
PHE
296
C
VAL
297
n
65
VAL
297
C
LYS
298
n
66
LYS
298
C
LEU
299
n
67
LEU
299
C
CYS
300
n
68
CYS
300
C
PRO
301
n
69
PRO
301
C
n
70
302
C
n
71
303
C
n
72
304
C
n
1
233
D
n
2
234
D
n
3
235
D
n
4
236
D
n
5
237
D
n
6
238
D
n
7
239
D
n
8
240
D
n
9
241
D
n
10
242
D
n
11
243
D
n
12
244
D
LEU
245
n
13
LEU
245
D
THR
246
n
14
THR
246
D
TYR
247
n
15
TYR
247
D
GLY
248
n
16
GLY
248
D
VAL
249
n
17
VAL
249
D
ALA
250
n
18
ALA
250
D
LEU
251
n
19
LEU
251
D
TYR
252
n
20
TYR
252
D
ARG
253
n
21
ARG
253
D
PHE
254
n
22
PHE
254
D
GLN
255
n
23
GLN
255
D
ALA
256
n
24
ALA
256
D
LEU
257
n
25
LEU
257
D
GLU
258
n
26
GLU
258
D
PRO
259
n
27
PRO
259
D
ASN
260
n
28
ASN
260
D
GLU
261
n
29
GLU
261
D
LEU
262
n
30
LEU
262
D
ASP
263
n
31
ASP
263
D
PHE
264
n
32
PHE
264
D
GLU
265
n
33
GLU
265
D
VAL
266
n
34
VAL
266
D
GLY
267
n
35
GLY
267
D
ASP
268
n
36
ASP
268
D
LYS
269
n
37
LYS
269
D
ILE
270
n
38
ILE
270
D
ARG
271
n
39
ARG
271
D
ILE
272
n
40
ILE
272
D
LEU
273
n
41
LEU
273
D
ALA
274
n
42
ALA
274
D
THR
275
n
43
THR
275
D
LEU
276
n
44
LEU
276
D
GLU
277
n
45
GLU
277
D
ASP
278
n
46
ASP
278
D
GLY
279
n
47
GLY
279
D
TRP
280
n
48
TRP
280
D
LEU
281
n
49
LEU
281
D
GLU
282
n
50
GLU
282
D
GLY
283
n
51
GLY
283
D
SER
284
n
52
SER
284
D
LEU
285
n
53
LEU
285
D
LYS
286
n
54
LYS
286
D
GLY
287
n
55
GLY
287
D
ARG
288
n
56
ARG
288
D
THR
289
n
57
THR
289
D
GLY
290
n
58
GLY
290
D
ILE
291
n
59
ILE
291
D
PHE
292
n
60
PHE
292
D
PRO
293
n
61
PRO
293
D
TYR
294
n
62
TYR
294
D
ARG
295
n
63
ARG
295
D
PHE
296
n
64
PHE
296
D
VAL
297
n
65
VAL
297
D
LYS
298
n
66
LYS
298
D
LEU
299
n
67
LEU
299
D
CYS
300
n
68
CYS
300
D
PRO
301
n
69
PRO
301
D
n
70
302
D
n
71
303
D
n
72
304
D
3.3451
-0.5587
2.3240
1.7223
0.0719
4.5338
-0.0356
0.1807
0.1227
-0.0046
-0.0237
-0.0274
-0.2917
0.3647
0.0593
-0.0276
-0.0324
-0.0065
-0.0378
0.0194
-0.0627
refined
27.0654
40.8188
-20.8125
X-RAY DIFFRACTION
3.4048
-0.1785
2.1941
1.6127
-0.6476
4.8133
0.0174
-0.1554
0.1013
0.0057
-0.0220
-0.0153
-0.1937
-0.4174
0.0046
-0.0535
0.0271
0.0103
-0.0188
-0.0115
-0.0630
refined
4.0632
41.0008
-29.9175
X-RAY DIFFRACTION
3.5832
0.3600
-0.8640
7.5495
-0.2752
6.3453
-0.0182
0.3139
-0.0956
-0.6721
-0.5241
-0.1778
-0.8991
-0.3760
0.5423
0.1291
0.2134
0.0143
-0.1878
0.0098
-0.1728
refined
4.4720
56.9693
-14.2518
X-RAY DIFFRACTION
2.5704
0.3661
-1.8569
12.6771
-2.2086
6.9885
0.0936
-0.1927
-0.0459
0.6266
-0.4068
-0.1430
-1.0845
0.7536
0.3132
0.0930
-0.1980
-0.0483
-0.1782
0.0288
-0.1982
refined
25.7858
56.5950
-2.1684
X-RAY DIFFRACTION
A
245
A
302
X-RAY DIFFRACTION
1
{ A|* }
B
245
B
301
X-RAY DIFFRACTION
2
{ B|* }
C
246
C
301
X-RAY DIFFRACTION
3
{ C|* }
D
245
D
301
X-RAY DIFFRACTION
4
{ D|* }
software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
290
A
O
GLY
58
A
N
GLY
283
A
N
GLY
51
A
O
GLU
282
A
O
GLU
50
A
N
ALA
274
A
N
ALA
42
A
O
ILE
270
A
O
ILE
38
A
N
GLY
248
A
N
GLY
16
A
N
TYR
247
A
N
TYR
15
A
O
CYS
300
A
O
CYS
68
B
O
GLY
290
B
O
GLY
58
B
N
GLY
283
B
N
GLY
51
B
O
GLU
282
B
O
GLU
50
B
N
ALA
274
B
N
ALA
42
B
O
ILE
270
B
O
ILE
38
B
N
GLY
248
B
N
GLY
16
B
N
TYR
247
B
N
TYR
15
B
O
CYS
300
B
O
CYS
68
C
O
GLY
290
C
O
GLY
58
C
N
GLY
283
C
N
GLY
51
C
O
GLU
282
C
O
GLU
50
C
N
LEU
273
C
N
LEU
41
C
O
ILE
270
C
O
ILE
38
C
N
GLY
248
C
N
GLY
16
C
N
TYR
247
C
N
TYR
15
C
O
CYS
300
C
O
CYS
68
D
O
GLY
290
D
O
GLY
58
D
N
GLY
283
D
N
GLY
51
D
O
GLU
282
D
O
GLU
50
D
N
LEU
273
D
N
LEU
41
D
O
ILE
270
D
O
ILE
38
D
N
GLY
248
D
N
GLY
16
D
N
TYR
247
D
N
TYR
15
D
O
CYS
300
D
O
CYS
68
1
A
CG
LEU
245
A
CG
LEU
13
1
Y
1
A
CD1
LEU
245
A
CD1
LEU
13
1
Y
1
A
CD2
LEU
245
A
CD2
LEU
13
1
Y
1
A
CG
GLU
277
A
CG
GLU
45
1
Y
1
A
CD
GLU
277
A
CD
GLU
45
1
Y
1
A
OE1
GLU
277
A
OE1
GLU
45
1
Y
1
A
OE2
GLU
277
A
OE2
GLU
45
1
Y
1
A
CD
LYS
298
A
CD
LYS
66
1
Y
1
A
CE
LYS
298
A
CE
LYS
66
1
Y
1
A
NZ
LYS
298
A
NZ
LYS
66
1
Y
1
A
C
ALA
302
A
C
ALA
70
1
Y
1
A
O
ALA
302
A
O
ALA
70
1
Y
1
A
CB
ALA
302
A
CB
ALA
70
1
Y
1
B
CG
LEU
245
B
CG
LEU
13
1
Y
1
B
CD1
LEU
245
B
CD1
LEU
13
1
Y
1
B
CD2
LEU
245
B
CD2
LEU
13
1
Y
1
B
CG
GLU
277
B
CG
GLU
45
1
Y
1
B
CD
GLU
277
B
CD
GLU
45
1
Y
1
B
OE1
GLU
277
B
OE1
GLU
45
1
Y
1
B
OE2
GLU
277
B
OE2
GLU
45
1
Y
1
B
CE
LYS
298
B
CE
LYS
66
1
Y
1
B
NZ
LYS
298
B
NZ
LYS
66
1
Y
1
C
OG1
THR
246
C
OG1
THR
14
1
Y
1
C
CG2
THR
246
C
CG2
THR
14
1
Y
1
C
CG
LYS
269
C
CG
LYS
37
1
Y
1
C
CD
LYS
269
C
CD
LYS
37
1
Y
1
C
CE
LYS
269
C
CE
LYS
37
1
Y
1
C
NZ
LYS
269
C
NZ
LYS
37
1
Y
1
C
CG
LYS
286
C
CG
LYS
54
1
Y
1
C
CD
LYS
286
C
CD
LYS
54
1
Y
1
C
CE
LYS
286
C
CE
LYS
54
1
Y
1
C
NZ
LYS
286
C
NZ
LYS
54
1
Y
1
C
CG
ARG
288
C
CG
ARG
56
1
Y
1
C
CD
ARG
288
C
CD
ARG
56
1
Y
1
C
NE
ARG
288
C
NE
ARG
56
1
Y
1
C
CZ
ARG
288
C
CZ
ARG
56
1
Y
1
C
NH1
ARG
288
C
NH1
ARG
56
1
Y
1
C
NH2
ARG
288
C
NH2
ARG
56
1
Y
1
C
CD1
TYR
294
C
CD1
TYR
62
1
Y
1
C
CD2
TYR
294
C
CD2
TYR
62
1
Y
1
C
CE1
TYR
294
C
CE1
TYR
62
1
Y
1
C
CE2
TYR
294
C
CE2
TYR
62
1
Y
1
C
CZ
TYR
294
C
CZ
TYR
62
1
Y
1
C
OH
TYR
294
C
OH
TYR
62
1
Y
1
C
CG
ARG
295
C
CG
ARG
63
1
Y
1
C
CD
ARG
295
C
CD
ARG
63
1
Y
1
C
NE
ARG
295
C
NE
ARG
63
1
Y
1
C
CZ
ARG
295
C
CZ
ARG
63
1
Y
1
C
NH1
ARG
295
C
NH1
ARG
63
1
Y
1
C
NH2
ARG
295
C
NH2
ARG
63
1
Y
1
C
CD
LYS
298
C
CD
LYS
66
1
Y
1
C
CE
LYS
298
C
CE
LYS
66
1
Y
1
C
NZ
LYS
298
C
NZ
LYS
66
1
Y
1
D
CG
LEU
245
D
CG
LEU
13
1
Y
1
D
CD1
LEU
245
D
CD1
LEU
13
1
Y
1
D
CD2
LEU
245
D
CD2
LEU
13
1
Y
1
D
NE
ARG
253
D
NE
ARG
21
1
Y
1
D
CZ
ARG
253
D
CZ
ARG
21
1
Y
1
D
NH1
ARG
253
D
NH1
ARG
21
1
Y
1
D
NH2
ARG
253
D
NH2
ARG
21
1
Y
1
D
CG
LYS
269
D
CG
LYS
37
1
Y
1
D
CD
LYS
269
D
CD
LYS
37
1
Y
1
D
CE
LYS
269
D
CE
LYS
37
1
Y
1
D
NZ
LYS
269
D
NZ
LYS
37
1
Y
1
D
OE1
GLU
277
D
OE1
GLU
45
1
Y
1
D
OE2
GLU
277
D
OE2
GLU
45
1
Y
1
D
CD
LYS
286
D
CD
LYS
54
1
Y
1
D
CE
LYS
286
D
CE
LYS
54
1
Y
1
D
NZ
LYS
286
D
NZ
LYS
54
1
Y
1
D
CG
ARG
295
D
CG
ARG
63
1
Y
1
D
CD
ARG
295
D
CD
ARG
63
1
Y
1
D
NE
ARG
295
D
NE
ARG
63
1
Y
1
D
CZ
ARG
295
D
CZ
ARG
63
1
Y
1
D
NH1
ARG
295
D
NH1
ARG
63
1
Y
1
D
NH2
ARG
295
D
NH2
ARG
63
1
Y
1
D
CD
LYS
298
D
CD
LYS
66
1
Y
1
D
CE
LYS
298
D
CE
LYS
66
1
Y
1
D
NZ
LYS
298
D
NZ
LYS
66
1
Y
1
A
GLY
233
A
GLY
1
1
Y
1
A
GLY
234
A
GLY
2
1
Y
1
A
ALA
235
A
ALA
3
1
Y
1
A
ALA
236
A
ALA
4
1
Y
1
A
GLN
237
A
GLN
5
1
Y
1
A
PRO
238
A
PRO
6
1
Y
1
A
ALA
239
A
ALA
7
1
Y
1
A
MET
240
A
MET
8
1
Y
1
A
ALA
241
A
ALA
9
1
Y
1
A
GLN
242
A
GLN
10
1
Y
1
A
GLY
243
A
GLY
11
1
Y
1
A
ALA
244
A
ALA
12
1
Y
1
A
ALA
303
A
ALA
71
1
Y
1
A
ALA
304
A
ALA
72
1
Y
1
B
GLY
233
B
GLY
1
1
Y
1
B
GLY
234
B
GLY
2
1
Y
1
B
ALA
235
B
ALA
3
1
Y
1
B
ALA
236
B
ALA
4
1
Y
1
B
GLN
237
B
GLN
5
1
Y
1
B
PRO
238
B
PRO
6
1
Y
1
B
ALA
239
B
ALA
7
1
Y
1
B
MET
240
B
MET
8
1
Y
1
B
ALA
241
B
ALA
9
1
Y
1
B
GLN
242
B
GLN
10
1
Y
1
B
GLY
243
B
GLY
11
1
Y
1
B
ALA
244
B
ALA
12
1
Y
1
B
ALA
302
B
ALA
70
1
Y
1
B
ALA
303
B
ALA
71
1
Y
1
B
ALA
304
B
ALA
72
1
Y
1
C
GLY
233
C
GLY
1
1
Y
1
C
GLY
234
C
GLY
2
1
Y
1
C
ALA
235
C
ALA
3
1
Y
1
C
ALA
236
C
ALA
4
1
Y
1
C
GLN
237
C
GLN
5
1
Y
1
C
PRO
238
C
PRO
6
1
Y
1
C
ALA
239
C
ALA
7
1
Y
1
C
MET
240
C
MET
8
1
Y
1
C
ALA
241
C
ALA
9
1
Y
1
C
GLN
242
C
GLN
10
1
Y
1
C
GLY
243
C
GLY
11
1
Y
1
C
ALA
244
C
ALA
12
1
Y
1
C
LEU
245
C
LEU
13
1
Y
1
C
ALA
302
C
ALA
70
1
Y
1
C
ALA
303
C
ALA
71
1
Y
1
C
ALA
304
C
ALA
72
1
Y
1
D
GLY
233
D
GLY
1
1
Y
1
D
GLY
234
D
GLY
2
1
Y
1
D
ALA
235
D
ALA
3
1
Y
1
D
ALA
236
D
ALA
4
1
Y
1
D
GLN
237
D
GLN
5
1
Y
1
D
PRO
238
D
PRO
6
1
Y
1
D
ALA
239
D
ALA
7
1
Y
1
D
MET
240
D
MET
8
1
Y
1
D
ALA
241
D
ALA
9
1
Y
1
D
GLN
242
D
GLN
10
1
Y
1
D
GLY
243
D
GLY
11
1
Y
1
D
ALA
244
D
ALA
12
1
Y
1
D
ALA
302
D
ALA
70
1
Y
1
D
ALA
303
D
ALA
71
1
Y
1
D
ALA
304
D
ALA
72
1
Y
145.160
40.3978
12.920
0.7184
0.0000
0.0000
-7.8918
0.0000
7.1734
0.9312
0.9247
0.2587
0.2289
0.2302
1.9000
35.8200
915
21876
4.1800
99.7700
1.000
0.400
0.1630
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
PDB entry 2DRK
0.295
1.9000
35.8200
135
1916
18
0
1763
0.2363
0.2049
0.2061
1.9900
104
2705
2809
11
3.7000
99.7700
21.3
1.900
50.000
4GLM
21923
0.080
1.181
1
9.000
7.500
99.900
0.757
1.900
1.930
1083
0.763
1
7.100
100.000
0.582
1.930
1.970
1085
0.800
1
7.200
100.000
0.555
1.970
2.010
1058
0.836
1
7.400
100.000
0.446
2.010
2.050
1058
0.854
1
7.500
99.900
0.348
2.050
2.090
1109
0.889
1
7.500
100.000
0.330
2.090
2.140
1057
0.915
1
7.500
100.000
0.282
2.140
2.190
1070
0.922
1
7.500
100.000
0.248
2.190
2.250
1093
0.930
1
7.500
99.800
0.229
2.250
2.320
1055
0.966
1
7.600
100.000
0.188
2.320
2.390
1093
0.905
1
7.500
100.000
0.172
2.390
2.480
1080
0.944
1
7.600
99.900
0.145
2.480
2.580
1105
0.959
1
7.600
100.000
0.108
2.580
2.700
1083
0.992
1
7.600
99.900
0.097
2.700
2.840
1082
1.099
1
7.600
100.000
0.082
2.840
3.020
1089
1.428
1
7.600
100.000
0.071
3.020
3.250
1114
1.807
1
7.500
100.000
0.063
3.250
3.580
1108
2.250
1
7.600
100.000
0.047
3.580
4.090
1125
2.088
1
7.500
100.000
0.032
4.090
5.160
1140
1.536
1
7.400
100.000
0.031
5.160
50.000
1236
1.546
1
7.100
99.400
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
refinement
BUSTER
2.10.0
Crystal structure of the SH3 Domain of DNMBP protein [Homo sapiens]
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN
SIGNALING PROTEIN
SH3 Domain, DNMBP, Structural Genomics, Structural Genomics Consortium, SGC, Src homology 3 domains, cell junctions, dynamin binding, SIGNALING PROTEIN
DNMBP_HUMAN
UNP
1
246
Q6XZF7
TYGVALYRFQALEPNELDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCP
246
301
4GLM
246
301
Q6XZF7
A
1
14
69
246
301
4GLM
246
301
Q6XZF7
B
1
14
69
246
301
4GLM
246
301
Q6XZF7
C
1
14
69
246
301
4GLM
246
301
Q6XZF7
D
1
14
69
1
expression tag
GLY
233
4GLM
A
Q6XZF7
UNP
1
1
expression tag
GLY
234
4GLM
A
Q6XZF7
UNP
2
1
expression tag
ALA
235
4GLM
A
Q6XZF7
UNP
3
1
expression tag
ALA
236
4GLM
A
Q6XZF7
UNP
4
1
expression tag
GLN
237
4GLM
A
Q6XZF7
UNP
5
1
expression tag
PRO
238
4GLM
A
Q6XZF7
UNP
6
1
expression tag
ALA
239
4GLM
A
Q6XZF7
UNP
7
1
expression tag
MET
240
4GLM
A
Q6XZF7
UNP
8
1
expression tag
ALA
241
4GLM
A
Q6XZF7
UNP
9
1
expression tag
GLN
242
4GLM
A
Q6XZF7
UNP
10
1
expression tag
GLY
243
4GLM
A
Q6XZF7
UNP
11
1
expression tag
ALA
244
4GLM
A
Q6XZF7
UNP
12
1
expression tag
LEU
245
4GLM
A
Q6XZF7
UNP
13
1
expression tag
ALA
302
4GLM
A
Q6XZF7
UNP
70
1
expression tag
ALA
303
4GLM
A
Q6XZF7
UNP
71
1
expression tag
ALA
304
4GLM
A
Q6XZF7
UNP
72
2
expression tag
GLY
233
4GLM
B
Q6XZF7
UNP
1
2
expression tag
GLY
234
4GLM
B
Q6XZF7
UNP
2
2
expression tag
ALA
235
4GLM
B
Q6XZF7
UNP
3
2
expression tag
ALA
236
4GLM
B
Q6XZF7
UNP
4
2
expression tag
GLN
237
4GLM
B
Q6XZF7
UNP
5
2
expression tag
PRO
238
4GLM
B
Q6XZF7
UNP
6
2
expression tag
ALA
239
4GLM
B
Q6XZF7
UNP
7
2
expression tag
MET
240
4GLM
B
Q6XZF7
UNP
8
2
expression tag
ALA
241
4GLM
B
Q6XZF7
UNP
9
2
expression tag
GLN
242
4GLM
B
Q6XZF7
UNP
10
2
expression tag
GLY
243
4GLM
B
Q6XZF7
UNP
11
2
expression tag
ALA
244
4GLM
B
Q6XZF7
UNP
12
2
expression tag
LEU
245
4GLM
B
Q6XZF7
UNP
13
2
expression tag
ALA
302
4GLM
B
Q6XZF7
UNP
70
2
expression tag
ALA
303
4GLM
B
Q6XZF7
UNP
71
2
expression tag
ALA
304
4GLM
B
Q6XZF7
UNP
72
3
expression tag
GLY
233
4GLM
C
Q6XZF7
UNP
1
3
expression tag
GLY
234
4GLM
C
Q6XZF7
UNP
2
3
expression tag
ALA
235
4GLM
C
Q6XZF7
UNP
3
3
expression tag
ALA
236
4GLM
C
Q6XZF7
UNP
4
3
expression tag
GLN
237
4GLM
C
Q6XZF7
UNP
5
3
expression tag
PRO
238
4GLM
C
Q6XZF7
UNP
6
3
expression tag
ALA
239
4GLM
C
Q6XZF7
UNP
7
3
expression tag
MET
240
4GLM
C
Q6XZF7
UNP
8
3
expression tag
ALA
241
4GLM
C
Q6XZF7
UNP
9
3
expression tag
GLN
242
4GLM
C
Q6XZF7
UNP
10
3
expression tag
GLY
243
4GLM
C
Q6XZF7
UNP
11
3
expression tag
ALA
244
4GLM
C
Q6XZF7
UNP
12
3
expression tag
LEU
245
4GLM
C
Q6XZF7
UNP
13
3
expression tag
ALA
302
4GLM
C
Q6XZF7
UNP
70
3
expression tag
ALA
303
4GLM
C
Q6XZF7
UNP
71
3
expression tag
ALA
304
4GLM
C
Q6XZF7
UNP
72
4
expression tag
GLY
233
4GLM
D
Q6XZF7
UNP
1
4
expression tag
GLY
234
4GLM
D
Q6XZF7
UNP
2
4
expression tag
ALA
235
4GLM
D
Q6XZF7
UNP
3
4
expression tag
ALA
236
4GLM
D
Q6XZF7
UNP
4
4
expression tag
GLN
237
4GLM
D
Q6XZF7
UNP
5
4
expression tag
PRO
238
4GLM
D
Q6XZF7
UNP
6
4
expression tag
ALA
239
4GLM
D
Q6XZF7
UNP
7
4
expression tag
MET
240
4GLM
D
Q6XZF7
UNP
8
4
expression tag
ALA
241
4GLM
D
Q6XZF7
UNP
9
4
expression tag
GLN
242
4GLM
D
Q6XZF7
UNP
10
4
expression tag
GLY
243
4GLM
D
Q6XZF7
UNP
11
4
expression tag
ALA
244
4GLM
D
Q6XZF7
UNP
12
4
expression tag
LEU
245
4GLM
D
Q6XZF7
UNP
13
4
expression tag
ALA
302
4GLM
D
Q6XZF7
UNP
70
4
expression tag
ALA
303
4GLM
D
Q6XZF7
UNP
71
4
expression tag
ALA
304
4GLM
D
Q6XZF7
UNP
72
5
5
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
288
A
ARG
56
A
PRO
293
A
PRO
61
A
TRP
280
A
TRP
48
A
LEU
285
A
LEU
53
A
LYS
269
A
LYS
37
A
THR
275
A
THR
43
A
THR
246
A
THR
14
A
ALA
250
A
ALA
18
A
VAL
297
A
VAL
65
A
PRO
301
A
PRO
69
B
ARG
288
B
ARG
56
B
PRO
293
B
PRO
61
B
TRP
280
B
TRP
48
B
LEU
285
B
LEU
53
B
LYS
269
B
LYS
37
B
THR
275
B
THR
43
B
TYR
247
B
TYR
15
B
ALA
250
B
ALA
18
B
VAL
297
B
VAL
65
B
CYS
300
B
CYS
68
C
ARG
288
C
ARG
56
C
PRO
293
C
PRO
61
C
TRP
280
C
TRP
48
C
LEU
285
C
LEU
53
C
LYS
269
C
LYS
37
C
THR
275
C
THR
43
C
TYR
247
C
TYR
15
C
ALA
250
C
ALA
18
C
VAL
297
C
VAL
65
C
CYS
300
C
CYS
68
D
ARG
288
D
ARG
56
D
PRO
293
D
PRO
61
D
TRP
280
D
TRP
48
D
LEU
285
D
LEU
53
D
LYS
269
D
LYS
37
D
THR
275
D
THR
43
D
TYR
247
D
TYR
15
D
ALA
250
D
ALA
18
D
VAL
297
D
VAL
65
D
CYS
300
D
CYS
68
18
P 21 21 2