0.020259
0.000000
0.000000
0.000000
0.015718
0.000000
0.000000
0.000000
0.013970
0.00000
0.00000
0.00000
Chartron, J.W.
VanderVelde, D.G.
Clemons Jr., W.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
49.360
63.620
71.580
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
O
N
21
N
N
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
C
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
N
N
48
S
C
N
49
N
C
N
50
N
O
N
51
N
C
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
N
N
68
S
C
N
69
N
C
N
70
N
O
N
71
N
C
N
72
N
C
N
73
N
C
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
N
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
S
C
N
98
N
C
N
99
N
O
N
100
N
C
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
Y
105
N
N
N
106
N
O
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
N
N
121
S
C
N
122
N
C
N
123
N
O
N
124
S
C
N
125
N
C
N
126
N
C
N
127
N
C
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
S
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
N
N
165
S
C
N
166
N
C
N
167
N
O
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
N
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
N
C
N
194
N
C
N
195
N
S
N
196
N
C
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
N
C
Y
214
N
C
Y
215
N
C
Y
216
N
C
Y
217
N
C
Y
218
N
C
Y
219
N
C
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
O
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
N
N
264
S
C
N
265
N
C
N
266
N
O
N
267
R
C
N
268
N
O
N
269
N
C
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
doub
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
Y
101
N
sing
Y
102
N
doub
Y
103
N
doub
N
104
N
sing
Y
105
N
sing
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
Y
209
N
doub
Y
210
N
sing
Y
211
N
sing
N
212
N
sing
Y
213
N
doub
N
214
N
sing
Y
215
N
doub
N
216
N
sing
Y
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
US
Cell Rep
2211-1247
2
1620
1632
10.1016/j.celrep.2012.10.010
23142665
Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface.
2012
10.2210/pdb4goc/pdb
pdb_00004goc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2012-02-26
PSI PILATUS 6M
Liquid nitrogen-cooled double crystal
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BL12-2
SSRL
1.0000
SYNCHROTRON
SSRL BEAMLINE BL12-2
8544.010
Golgi to ER traffic protein 5
3
man
polymer
18.015
water
104
nat
water
Ubiquitin-like protein MDY2, Mating-deficient protein 2, Translation machinery-associated protein 24
no
no
SVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMI
SVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMI
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
ATCC 204508 / S288c
sample
GET5, MDY2, TMA24, YOL111C
559292
Saccharomyces cerevisiae
562
Escherichia coli
NiCo(DE3)
plasmid
pET33b
1
2.19
43.90
VAPOR DIFFUSION, HANGING DROP
7.0
2.4 M sodium malonate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Database references
Database references
Database references
Data collection
Database references
1
0
2012-11-21
1
1
2012-11-28
1
2
2013-01-02
1
3
2013-01-16
1
4
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2012-08-19
REL
REL
HOH
water
HOH
1
2
HOH
HOH
201
A
HOH
4
2
HOH
HOH
202
A
HOH
6
2
HOH
HOH
203
A
HOH
9
2
HOH
HOH
204
A
HOH
10
2
HOH
HOH
205
A
HOH
18
2
HOH
HOH
206
A
HOH
20
2
HOH
HOH
207
A
HOH
23
2
HOH
HOH
208
A
HOH
27
2
HOH
HOH
209
A
HOH
28
2
HOH
HOH
210
A
HOH
29
2
HOH
HOH
211
A
HOH
31
2
HOH
HOH
212
A
HOH
33
2
HOH
HOH
213
A
HOH
35
2
HOH
HOH
214
A
HOH
43
2
HOH
HOH
215
A
HOH
46
2
HOH
HOH
216
A
HOH
48
2
HOH
HOH
217
A
HOH
54
2
HOH
HOH
218
A
HOH
60
2
HOH
HOH
219
A
HOH
61
2
HOH
HOH
220
A
HOH
63
2
HOH
HOH
221
A
HOH
65
2
HOH
HOH
222
A
HOH
67
2
HOH
HOH
223
A
HOH
85
2
HOH
HOH
224
A
HOH
88
2
HOH
HOH
225
A
HOH
89
2
HOH
HOH
226
A
HOH
90
2
HOH
HOH
227
A
HOH
93
2
HOH
HOH
228
A
HOH
95
2
HOH
HOH
229
A
HOH
100
2
HOH
HOH
230
A
HOH
104
2
HOH
HOH
231
A
HOH
5
2
HOH
HOH
201
B
HOH
7
2
HOH
HOH
202
B
HOH
13
2
HOH
HOH
203
B
HOH
14
2
HOH
HOH
204
B
HOH
19
2
HOH
HOH
205
B
HOH
22
2
HOH
HOH
206
B
HOH
36
2
HOH
HOH
207
B
HOH
40
2
HOH
HOH
208
B
HOH
42
2
HOH
HOH
209
B
HOH
51
2
HOH
HOH
210
B
HOH
55
2
HOH
HOH
211
B
HOH
56
2
HOH
HOH
212
B
HOH
57
2
HOH
HOH
213
B
HOH
58
2
HOH
HOH
214
B
HOH
59
2
HOH
HOH
215
B
HOH
62
2
HOH
HOH
216
B
HOH
64
2
HOH
HOH
217
B
HOH
66
2
HOH
HOH
218
B
HOH
68
2
HOH
HOH
219
B
HOH
70
2
HOH
HOH
220
B
HOH
72
2
HOH
HOH
221
B
HOH
73
2
HOH
HOH
222
B
HOH
75
2
HOH
HOH
223
B
HOH
77
2
HOH
HOH
224
B
HOH
78
2
HOH
HOH
225
B
HOH
79
2
HOH
HOH
226
B
HOH
81
2
HOH
HOH
227
B
HOH
83
2
HOH
HOH
228
B
HOH
84
2
HOH
HOH
229
B
HOH
86
2
HOH
HOH
230
B
HOH
87
2
HOH
HOH
231
B
HOH
91
2
HOH
HOH
232
B
HOH
92
2
HOH
HOH
233
B
HOH
94
2
HOH
HOH
234
B
HOH
96
2
HOH
HOH
235
B
HOH
98
2
HOH
HOH
236
B
HOH
99
2
HOH
HOH
237
B
HOH
102
2
HOH
HOH
238
B
HOH
2
2
HOH
HOH
201
C
HOH
3
2
HOH
HOH
202
C
HOH
8
2
HOH
HOH
203
C
HOH
11
2
HOH
HOH
204
C
HOH
12
2
HOH
HOH
205
C
HOH
15
2
HOH
HOH
206
C
HOH
16
2
HOH
HOH
207
C
HOH
17
2
HOH
HOH
208
C
HOH
21
2
HOH
HOH
209
C
HOH
24
2
HOH
HOH
210
C
HOH
25
2
HOH
HOH
211
C
HOH
26
2
HOH
HOH
212
C
HOH
30
2
HOH
HOH
213
C
HOH
32
2
HOH
HOH
214
C
HOH
34
2
HOH
HOH
215
C
HOH
37
2
HOH
HOH
216
C
HOH
38
2
HOH
HOH
217
C
HOH
39
2
HOH
HOH
218
C
HOH
41
2
HOH
HOH
219
C
HOH
44
2
HOH
HOH
220
C
HOH
45
2
HOH
HOH
221
C
HOH
47
2
HOH
HOH
222
C
HOH
49
2
HOH
HOH
223
C
HOH
50
2
HOH
HOH
224
C
HOH
52
2
HOH
HOH
225
C
HOH
53
2
HOH
HOH
226
C
HOH
69
2
HOH
HOH
227
C
HOH
71
2
HOH
HOH
228
C
HOH
74
2
HOH
HOH
229
C
HOH
76
2
HOH
HOH
230
C
HOH
80
2
HOH
HOH
231
C
HOH
82
2
HOH
HOH
232
C
HOH
97
2
HOH
HOH
233
C
HOH
101
2
HOH
HOH
234
C
HOH
103
2
HOH
HOH
235
C
SER
73
n
1
SER
73
A
VAL
74
n
2
VAL
74
A
HIS
75
n
3
HIS
75
A
LEU
76
n
4
LEU
76
A
THR
77
n
5
THR
77
A
LEU
78
n
6
LEU
78
A
LYS
79
n
7
LYS
79
A
LYS
80
n
8
LYS
80
A
ILE
81
n
9
ILE
81
A
GLN
82
n
10
GLN
82
A
ALA
83
n
11
ALA
83
A
PRO
84
n
12
PRO
84
A
LYS
85
n
13
LYS
85
A
PHE
86
n
14
PHE
86
A
SER
87
n
15
SER
87
A
ILE
88
n
16
ILE
88
A
GLU
89
n
17
GLU
89
A
HIS
90
n
18
HIS
90
A
ASP
91
n
19
ASP
91
A
PHE
92
n
20
PHE
92
A
SER
93
n
21
SER
93
A
PRO
94
n
22
PRO
94
A
SER
95
n
23
SER
95
A
ASP
96
n
24
ASP
96
A
THR
97
n
25
THR
97
A
ILE
98
n
26
ILE
98
A
LEU
99
n
27
LEU
99
A
GLN
100
n
28
GLN
100
A
ILE
101
n
29
ILE
101
A
LYS
102
n
30
LYS
102
A
GLN
103
n
31
GLN
103
A
HIS
104
n
32
HIS
104
A
LEU
105
n
33
LEU
105
A
ILE
106
n
34
ILE
106
A
SER
107
n
35
SER
107
A
GLU
108
n
36
GLU
108
A
GLU
109
n
37
GLU
109
A
LYS
110
n
38
LYS
110
A
ALA
111
n
39
ALA
111
A
SER
112
n
40
SER
112
A
HIS
113
n
41
HIS
113
A
ILE
114
n
42
ILE
114
A
SER
115
n
43
SER
115
A
GLU
116
n
44
GLU
116
A
ILE
117
n
45
ILE
117
A
LYS
118
n
46
LYS
118
A
LEU
119
n
47
LEU
119
A
LEU
120
n
48
LEU
120
A
LEU
121
n
49
LEU
121
A
LYS
122
n
50
LYS
122
A
GLY
123
n
51
GLY
123
A
LYS
124
n
52
LYS
124
A
VAL
125
n
53
VAL
125
A
LEU
126
n
54
LEU
126
A
HIS
127
n
55
HIS
127
A
ASP
128
n
56
ASP
128
A
ASN
129
n
57
ASN
129
A
LEU
130
n
58
LEU
130
A
PHE
131
n
59
PHE
131
A
LEU
132
n
60
LEU
132
A
SER
133
n
61
SER
133
A
ASP
134
n
62
ASP
134
A
LEU
135
n
63
LEU
135
A
LYS
136
n
64
LYS
136
A
VAL
137
n
65
VAL
137
A
THR
138
n
66
THR
138
A
PRO
139
n
67
PRO
139
A
ALA
140
n
68
ALA
140
A
ASN
141
n
69
ASN
141
A
SER
142
n
70
SER
142
A
THR
143
n
71
THR
143
A
ILE
144
n
72
ILE
144
A
THR
145
n
73
THR
145
A
VAL
146
n
74
VAL
146
A
MET
147
n
75
MET
147
A
ILE
148
n
76
ILE
148
A
SER
73
n
1
SER
73
B
VAL
74
n
2
VAL
74
B
HIS
75
n
3
HIS
75
B
LEU
76
n
4
LEU
76
B
THR
77
n
5
THR
77
B
LEU
78
n
6
LEU
78
B
LYS
79
n
7
LYS
79
B
LYS
80
n
8
LYS
80
B
ILE
81
n
9
ILE
81
B
GLN
82
n
10
GLN
82
B
ALA
83
n
11
ALA
83
B
PRO
84
n
12
PRO
84
B
LYS
85
n
13
LYS
85
B
PHE
86
n
14
PHE
86
B
SER
87
n
15
SER
87
B
ILE
88
n
16
ILE
88
B
GLU
89
n
17
GLU
89
B
HIS
90
n
18
HIS
90
B
ASP
91
n
19
ASP
91
B
PHE
92
n
20
PHE
92
B
SER
93
n
21
SER
93
B
PRO
94
n
22
PRO
94
B
SER
95
n
23
SER
95
B
ASP
96
n
24
ASP
96
B
THR
97
n
25
THR
97
B
ILE
98
n
26
ILE
98
B
LEU
99
n
27
LEU
99
B
GLN
100
n
28
GLN
100
B
ILE
101
n
29
ILE
101
B
LYS
102
n
30
LYS
102
B
GLN
103
n
31
GLN
103
B
HIS
104
n
32
HIS
104
B
LEU
105
n
33
LEU
105
B
ILE
106
n
34
ILE
106
B
SER
107
n
35
SER
107
B
GLU
108
n
36
GLU
108
B
GLU
109
n
37
GLU
109
B
LYS
110
n
38
LYS
110
B
ALA
111
n
39
ALA
111
B
SER
112
n
40
SER
112
B
HIS
113
n
41
HIS
113
B
ILE
114
n
42
ILE
114
B
SER
115
n
43
SER
115
B
GLU
116
n
44
GLU
116
B
ILE
117
n
45
ILE
117
B
LYS
118
n
46
LYS
118
B
LEU
119
n
47
LEU
119
B
LEU
120
n
48
LEU
120
B
LEU
121
n
49
LEU
121
B
LYS
122
n
50
LYS
122
B
GLY
123
n
51
GLY
123
B
LYS
124
n
52
LYS
124
B
VAL
125
n
53
VAL
125
B
LEU
126
n
54
LEU
126
B
HIS
127
n
55
HIS
127
B
ASP
128
n
56
ASP
128
B
ASN
129
n
57
ASN
129
B
LEU
130
n
58
LEU
130
B
PHE
131
n
59
PHE
131
B
LEU
132
n
60
LEU
132
B
SER
133
n
61
SER
133
B
ASP
134
n
62
ASP
134
B
LEU
135
n
63
LEU
135
B
LYS
136
n
64
LYS
136
B
VAL
137
n
65
VAL
137
B
THR
138
n
66
THR
138
B
PRO
139
n
67
PRO
139
B
ALA
140
n
68
ALA
140
B
ASN
141
n
69
ASN
141
B
SER
142
n
70
SER
142
B
THR
143
n
71
THR
143
B
ILE
144
n
72
ILE
144
B
THR
145
n
73
THR
145
B
VAL
146
n
74
VAL
146
B
MET
147
n
75
MET
147
B
ILE
148
n
76
ILE
148
B
SER
73
n
1
SER
73
C
VAL
74
n
2
VAL
74
C
HIS
75
n
3
HIS
75
C
LEU
76
n
4
LEU
76
C
THR
77
n
5
THR
77
C
LEU
78
n
6
LEU
78
C
LYS
79
n
7
LYS
79
C
LYS
80
n
8
LYS
80
C
ILE
81
n
9
ILE
81
C
GLN
82
n
10
GLN
82
C
ALA
83
n
11
ALA
83
C
PRO
84
n
12
PRO
84
C
LYS
85
n
13
LYS
85
C
PHE
86
n
14
PHE
86
C
SER
87
n
15
SER
87
C
ILE
88
n
16
ILE
88
C
GLU
89
n
17
GLU
89
C
HIS
90
n
18
HIS
90
C
ASP
91
n
19
ASP
91
C
PHE
92
n
20
PHE
92
C
SER
93
n
21
SER
93
C
PRO
94
n
22
PRO
94
C
SER
95
n
23
SER
95
C
ASP
96
n
24
ASP
96
C
THR
97
n
25
THR
97
C
ILE
98
n
26
ILE
98
C
LEU
99
n
27
LEU
99
C
GLN
100
n
28
GLN
100
C
ILE
101
n
29
ILE
101
C
LYS
102
n
30
LYS
102
C
GLN
103
n
31
GLN
103
C
HIS
104
n
32
HIS
104
C
LEU
105
n
33
LEU
105
C
ILE
106
n
34
ILE
106
C
SER
107
n
35
SER
107
C
GLU
108
n
36
GLU
108
C
GLU
109
n
37
GLU
109
C
LYS
110
n
38
LYS
110
C
ALA
111
n
39
ALA
111
C
SER
112
n
40
SER
112
C
HIS
113
n
41
HIS
113
C
ILE
114
n
42
ILE
114
C
SER
115
n
43
SER
115
C
GLU
116
n
44
GLU
116
C
ILE
117
n
45
ILE
117
C
LYS
118
n
46
LYS
118
C
LEU
119
n
47
LEU
119
C
LEU
120
n
48
LEU
120
C
LEU
121
n
49
LEU
121
C
LYS
122
n
50
LYS
122
C
GLY
123
n
51
GLY
123
C
LYS
124
n
52
LYS
124
C
VAL
125
n
53
VAL
125
C
LEU
126
n
54
LEU
126
C
HIS
127
n
55
HIS
127
C
ASP
128
n
56
ASP
128
C
ASN
129
n
57
ASN
129
C
LEU
130
n
58
LEU
130
C
PHE
131
n
59
PHE
131
C
LEU
132
n
60
LEU
132
C
SER
133
n
61
SER
133
C
ASP
134
n
62
ASP
134
C
LEU
135
n
63
LEU
135
C
LYS
136
n
64
LYS
136
C
VAL
137
n
65
VAL
137
C
THR
138
n
66
THR
138
C
PRO
139
n
67
PRO
139
C
ALA
140
n
68
ALA
140
C
ASN
141
n
69
ASN
141
C
SER
142
n
70
SER
142
C
THR
143
n
71
THR
143
C
ILE
144
n
72
ILE
144
C
THR
145
n
73
THR
145
C
VAL
146
n
74
VAL
146
C
MET
147
n
75
MET
147
C
ILE
148
n
76
ILE
148
C
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
88
A
O
ILE
16
A
N
LEU
78
A
N
LEU
6
A
N
THR
77
A
N
THR
5
A
O
ILE
144
A
O
ILE
72
A
O
THR
145
A
O
THR
73
A
N
LEU
120
A
N
LEU
48
A
N
LEU
121
A
N
LEU
49
A
O
LYS
124
A
O
LYS
52
B
O
ILE
88
B
O
ILE
16
B
N
LEU
78
B
N
LEU
6
B
N
THR
77
B
N
THR
5
B
O
ILE
144
B
O
ILE
72
B
O
THR
145
B
O
THR
73
B
N
LEU
120
B
N
LEU
48
B
N
LEU
121
B
N
LEU
49
B
O
LYS
124
B
O
LYS
52
C
O
PHE
92
C
O
PHE
20
C
N
VAL
74
C
N
VAL
2
C
N
THR
77
C
N
THR
5
C
O
ILE
144
C
O
ILE
72
C
O
MET
147
C
O
MET
75
C
N
LYS
118
C
N
LYS
46
C
N
LEU
121
C
N
LEU
49
C
O
LYS
124
C
O
LYS
52
1
B
B
O
O
HOH
HOH
218
223
1.80
1
C
C
OE2
O
GLU
HOH
89
211
1.93
1
A
B
O
O
HOH
HOH
219
214
1.98
1
B
B
OD2
O
ASP
HOH
134
213
2.02
1
C
C
O
O
HOH
HOH
221
228
2.03
1
B
B
O
O
HOH
HOH
232
237
2.03
1
C
C
OG1
O
THR
HOH
77
227
2.06
1
A
A
O
O
ASN
HOH
129
208
2.06
1
A
A
O
O
HOH
HOH
226
228
2.07
1
C
C
O
O
THR
HOH
143
213
2.12
1
A
A
NZ
O
LYS
HOH
122
201
2.13
1
B
LYS
136
67.48
63.06
1
B
ASN
141
-115.38
66.21
1
C
ASN
129
-88.95
45.27
1
C
ASN
141
-151.17
85.91
0.2453
0.1737
0.1809
2.400
29.069
907
9084
9.98
98.15
0.39
RANDOM
1
2.03
MOLECULAR REPLACEMENT
25.69
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
2.400
29.069
104
1907
0
0
1803
0.007
1833
1.103
2475
15.186
693
0.070
312
0.005
300
0.3505
0.2481
2.5504
149
1340
99.00
0.2998
0.2374
2.7472
149
1340
98.00
0.3053
0.2152
3.0234
148
1337
99.00
0.3106
0.1704
3.4602
151
1357
99.00
0.1797
0.1286
4.3572
151
1372
98.00
0.1929
0.1571
29.0710
159
1431
97.00
2.40
29.07
4GOC
9092
0.133
1
6.6
3.3
98.2
0.613
2.40
2.46
1.8
666
1
3.3
98.7
data collection
Blu-Ice
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.8_1066)
data reduction
XDS
data scaling
XDS
Crystal structure of the Get5 ubiquitin-like domain
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
A
THR
97
A
THR
25
HELX_P
A
GLU
108
A
GLU
36
1
1
12
A
HIS
113
A
HIS
41
HELX_P
A
ILE
117
A
ILE
45
5
2
5
A
PHE
131
A
PHE
59
HELX_P
A
LEU
135
A
LEU
63
5
3
5
B
THR
97
B
THR
25
HELX_P
B
GLU
108
B
GLU
36
1
4
12
B
HIS
113
B
HIS
41
HELX_P
B
ILE
117
B
ILE
45
5
5
5
B
PHE
131
B
PHE
59
HELX_P
B
LEU
135
B
LEU
63
5
6
5
C
THR
97
C
THR
25
HELX_P
C
GLU
108
C
GLU
36
1
7
12
C
HIS
113
C
HIS
41
HELX_P
C
ILE
117
C
ILE
45
5
8
5
C
PHE
131
C
PHE
59
HELX_P
C
LYS
136
C
LYS
64
5
9
6
PROTEIN BINDING
ubiquitin-like domain, protein-protein interaction, Sgt2, PROTEIN BINDING
A
ALA
83
A
ALA
11
1
A
PRO
84
A
PRO
12
-3.31
B
ALA
83
B
ALA
11
1
B
PRO
84
B
PRO
12
2.44
C
ALA
83
C
ALA
11
1
C
PRO
84
C
PRO
12
-3.74
MDY2_YEAST
UNP
1
74
Q12285
VHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMI
74
148
4GOC
74
148
Q12285
A
1
2
76
74
148
4GOC
74
148
Q12285
B
1
2
76
74
148
4GOC
74
148
Q12285
C
1
2
76
1
expression tag
SER
73
4GOC
A
Q12285
UNP
1
2
expression tag
SER
73
4GOC
B
Q12285
UNP
1
3
expression tag
SER
73
4GOC
C
Q12285
UNP
1
5
5
5
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
PHE
86
A
PHE
14
A
PHE
92
A
PHE
20
A
VAL
74
A
VAL
2
A
LYS
80
A
LYS
8
A
THR
143
A
THR
71
A
MET
147
A
MET
75
A
LYS
118
A
LYS
46
A
LEU
121
A
LEU
49
A
LYS
124
A
LYS
52
A
VAL
125
A
VAL
53
B
PHE
86
B
PHE
14
B
PHE
92
B
PHE
20
B
VAL
74
B
VAL
2
B
LYS
80
B
LYS
8
B
THR
143
B
THR
71
B
MET
147
B
MET
75
B
LYS
118
B
LYS
46
B
LEU
121
B
LEU
49
B
LYS
124
B
LYS
52
B
VAL
125
B
VAL
53
C
PHE
86
C
PHE
14
C
PHE
92
C
PHE
20
C
VAL
74
C
VAL
2
C
LYS
80
C
LYS
8
C
THR
143
C
THR
71
C
MET
147
C
MET
75
C
LYS
118
C
LYS
46
C
LEU
121
C
LEU
49
C
LYS
124
C
LYS
52
C
VAL
125
C
VAL
53
19
P 21 21 21