0.027735 0.000000 0.000000 -0.000000 0.016681 0.000000 0.000000 -0.000000 0.012144 0.000000 0.000000 0.000000 Sim, L. Groes, M. Olesen, K. Henriksen, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 36.056 59.947 82.344 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CA N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 S C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N S N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 R C N 252 R C N 253 R C N 254 S C N 255 R C N 256 N C N 257 N C N 258 N C N 259 N N N 260 N O N 261 N O N 262 N O N 263 N O N 264 N O N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C Y 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N C N 292 N O N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C N 309 N C N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C N 326 N O N 327 N O N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 R C N 340 N O N 341 N C N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N N Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C N 390 N O N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N N N 404 S C N 405 N C N 406 N O N 407 N C N 408 N C N 409 N C N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing Y 278 N doub Y 279 N sing Y 280 N sing N 281 N sing Y 282 N doub N 283 N sing Y 284 N doub N 285 N sing Y 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N doub N 343 N sing N 344 N sing N 345 N sing N 346 N sing Y 347 N doub Y 348 N sing Y 349 N sing N 350 N sing Y 351 N doub Y 352 N sing Y 353 N sing N 354 N sing Y 355 N sing Y 356 N doub N 357 N sing Y 358 N doub N 359 N sing Y 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing Y 375 N doub Y 376 N sing Y 377 N sing N 378 N sing Y 379 N doub N 380 N sing Y 381 N doub N 382 N sing Y 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing UK Febs J. 1742-464X 280 1073 1083 10.1111/febs.12102 23281814 Structural and biochemical characterization of the N-terminal domain of flocculin Lg-Flo1p from Saccharomyces pastorianus reveals a unique specificity for phosphorylated mannose. 2013 10.2210/pdb4gq7/pdb pdb_00004gq7 100 1 CCD 2002-02-27 BRUKER SMART 1000 Triangular single crystal Si(111) with horizontal diffraction plane SINGLE WAVELENGTH M x-ray 1 0.968 1.0 I711 MAX II 0.968 SYNCHROTRON MAX II BEAMLINE I711 24670.186 Flocculin UNP residues 26-245 1 man polymer 40.078 CALCIUM ION 1 syn non-polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 2 man non-polymer 18.015 water 39 nat water Lg-Flo1p no no EAEATQACLPVGSRKNGMNVNFYKYSLQDSTTYSDPQYMAYKYSDTKKLGSVSGQTHLSIYYGPNTAFWNTASWSSDLFG FYTTPTNVTVEMTGYFLPPQTGSYTFKFATVDDSAILSVGGSIAFECCAQEQPPITSTDFTINGIKPWDAAAPTDIKGST YMYAGYYYPIKIVYSNAKALARLPVSVVLPDGTEVNDDFEGYVYSFDDDLSQSNCTIPDPSKHT EAEATQACLPVGSRKNGMNVNFYKYSLQDSTTYSDPQYMAYKYSDTKKLGSVSGQTHLSIYYGPNTAFWNTASWSSDLFG FYTTPTNVTVEMTGYFLPPQTGSYTFKFATVDDSAILSVGGSIAFECCAQEQPPITSTDFTINGIKPWDAAAPTDIKGST YMYAGYYYPIKIVYSNAKALARLPVSVVLPDGTEVNDDFEGYVYSFDDDLSQSNCTIPDPSKHT A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Saccharomyces carlsbergensis CG2164 Pichia pastoris sample Lg-FLO1 27292 Saccharomyces pastorianus 644223 Komagataella pastoris GS115 plasmid pPIC-9k 1 1.80 31.80 VAPOR DIFFUSION 25% w/v PEG4000, 0.05 M potassium phosphate monobasic, VAPOR DIFFUSION, temperature 295K 295 diffrn_source software chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Database references Data collection Refinement description Data collection Database references Derived calculations Structure summary Data collection Database references Refinement description Structure summary 1 0 2013-01-16 1 1 2013-04-10 1 2 2017-11-15 1 3 2020-07-29 1 4 2023-09-13 _diffrn_source.pdbx_synchrotron_site _software.name _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_ref_seq_dif.details _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y RCSB 2012-08-22 REL REL CA CALCIUM ION NAG 2-acetamido-2-deoxy-beta-D-glucopyranose HOH water T173A IS A NATURAL VARIANT. 2XJV PDB ENTRY 2XJV PDB experimental model CA 1 2 CA CA 301 A NAG 2001 3 NAG NAG 302 A NAG 2001 3 NAG NAG 303 A HOH 1 4 HOH HOH 401 A HOH 2 4 HOH HOH 402 A HOH 3 4 HOH HOH 403 A HOH 4 4 HOH HOH 404 A HOH 5 4 HOH HOH 405 A HOH 6 4 HOH HOH 406 A HOH 7 4 HOH HOH 407 A HOH 8 4 HOH HOH 408 A HOH 9 4 HOH HOH 409 A HOH 10 4 HOH HOH 410 A HOH 11 4 HOH HOH 411 A HOH 12 4 HOH HOH 412 A HOH 13 4 HOH HOH 413 A HOH 14 4 HOH HOH 414 A HOH 15 4 HOH HOH 415 A HOH 16 4 HOH HOH 416 A HOH 17 4 HOH HOH 417 A HOH 18 4 HOH HOH 418 A HOH 19 4 HOH HOH 419 A HOH 20 4 HOH HOH 420 A HOH 21 4 HOH HOH 421 A HOH 22 4 HOH HOH 422 A HOH 23 4 HOH HOH 423 A HOH 24 4 HOH HOH 424 A HOH 25 4 HOH HOH 425 A HOH 26 4 HOH HOH 426 A HOH 27 4 HOH HOH 427 A HOH 28 4 HOH HOH 428 A HOH 29 4 HOH HOH 429 A HOH 30 4 HOH HOH 430 A HOH 31 4 HOH HOH 431 A HOH 32 4 HOH HOH 432 A HOH 33 4 HOH HOH 433 A HOH 34 4 HOH HOH 434 A HOH 35 4 HOH HOH 435 A HOH 36 4 HOH HOH 436 A HOH 37 4 HOH HOH 437 A HOH 38 4 HOH HOH 438 A HOH 39 4 HOH HOH 439 A n 1 22 A ALA 23 n 2 ALA 23 A GLU 24 n 3 GLU 24 A ALA 25 n 4 ALA 25 A THR 26 n 5 THR 26 A GLN 27 n 6 GLN 27 A ALA 28 n 7 ALA 28 A CYS 29 n 8 CYS 29 A LEU 30 n 9 LEU 30 A PRO 31 n 10 PRO 31 A VAL 32 n 11 VAL 32 A GLY 33 n 12 GLY 33 A SER 34 n 13 SER 34 A ARG 35 n 14 ARG 35 A LYS 36 n 15 LYS 36 A ASN 37 n 16 ASN 37 A GLY 38 n 17 GLY 38 A MET 39 n 18 MET 39 A ASN 40 n 19 ASN 40 A VAL 41 n 20 VAL 41 A ASN 42 n 21 ASN 42 A PHE 43 n 22 PHE 43 A TYR 44 n 23 TYR 44 A LYS 45 n 24 LYS 45 A TYR 46 n 25 TYR 46 A SER 47 n 26 SER 47 A LEU 48 n 27 LEU 48 A GLN 49 n 28 GLN 49 A ASP 50 n 29 ASP 50 A SER 51 n 30 SER 51 A THR 52 n 31 THR 52 A THR 53 n 32 THR 53 A TYR 54 n 33 TYR 54 A SER 55 n 34 SER 55 A ASP 56 n 35 ASP 56 A PRO 57 n 36 PRO 57 A GLN 58 n 37 GLN 58 A TYR 59 n 38 TYR 59 A MET 60 n 39 MET 60 A ALA 61 n 40 ALA 61 A TYR 62 n 41 TYR 62 A LYS 63 n 42 LYS 63 A TYR 64 n 43 TYR 64 A SER 65 n 44 SER 65 A ASP 66 n 45 ASP 66 A THR 67 n 46 THR 67 A LYS 68 n 47 LYS 68 A LYS 69 n 48 LYS 69 A LEU 70 n 49 LEU 70 A GLY 71 n 50 GLY 71 A SER 72 n 51 SER 72 A VAL 73 n 52 VAL 73 A SER 74 n 53 SER 74 A GLY 75 n 54 GLY 75 A GLN 76 n 55 GLN 76 A THR 77 n 56 THR 77 A HIS 78 n 57 HIS 78 A LEU 79 n 58 LEU 79 A SER 80 n 59 SER 80 A ILE 81 n 60 ILE 81 A TYR 82 n 61 TYR 82 A TYR 83 n 62 TYR 83 A GLY 84 n 63 GLY 84 A PRO 85 n 64 PRO 85 A ASN 86 n 65 ASN 86 A THR 87 n 66 THR 87 A ALA 88 n 67 ALA 88 A PHE 89 n 68 PHE 89 A TRP 90 n 69 TRP 90 A ASN 91 n 70 ASN 91 A THR 92 n 71 THR 92 A ALA 93 n 72 ALA 93 A SER 94 n 73 SER 94 A TRP 95 n 74 TRP 95 A SER 96 n 75 SER 96 A SER 97 n 76 SER 97 A ASP 98 n 77 ASP 98 A LEU 99 n 78 LEU 99 A PHE 100 n 79 PHE 100 A GLY 101 n 80 GLY 101 A PHE 102 n 81 PHE 102 A TYR 103 n 82 TYR 103 A THR 104 n 83 THR 104 A THR 105 n 84 THR 105 A PRO 106 n 85 PRO 106 A THR 107 n 86 THR 107 A ASN 108 n 87 ASN 108 A VAL 109 n 88 VAL 109 A THR 110 n 89 THR 110 A VAL 111 n 90 VAL 111 A GLU 112 n 91 GLU 112 A MET 113 n 92 MET 113 A THR 114 n 93 THR 114 A GLY 115 n 94 GLY 115 A TYR 116 n 95 TYR 116 A PHE 117 n 96 PHE 117 A LEU 118 n 97 LEU 118 A PRO 119 n 98 PRO 119 A PRO 120 n 99 PRO 120 A GLN 121 n 100 GLN 121 A THR 122 n 101 THR 122 A GLY 123 n 102 GLY 123 A SER 124 n 103 SER 124 A TYR 125 n 104 TYR 125 A THR 126 n 105 THR 126 A PHE 127 n 106 PHE 127 A LYS 128 n 107 LYS 128 A PHE 129 n 108 PHE 129 A ALA 130 n 109 ALA 130 A THR 131 n 110 THR 131 A VAL 132 n 111 VAL 132 A ASP 133 n 112 ASP 133 A ASP 134 n 113 ASP 134 A SER 135 n 114 SER 135 A ALA 136 n 115 ALA 136 A ILE 137 n 116 ILE 137 A LEU 138 n 117 LEU 138 A SER 139 n 118 SER 139 A VAL 140 n 119 VAL 140 A GLY 141 n 120 GLY 141 A GLY 142 n 121 GLY 142 A SER 143 n 122 SER 143 A ILE 144 n 123 ILE 144 A ALA 145 n 124 ALA 145 A PHE 146 n 125 PHE 146 A GLU 147 n 126 GLU 147 A CYS 148 n 127 CYS 148 A CYS 149 n 128 CYS 149 A ALA 150 n 129 ALA 150 A GLN 151 n 130 GLN 151 A GLU 152 n 131 GLU 152 A GLN 153 n 132 GLN 153 A PRO 154 n 133 PRO 154 A PRO 155 n 134 PRO 155 A ILE 156 n 135 ILE 156 A THR 157 n 136 THR 157 A SER 158 n 137 SER 158 A THR 159 n 138 THR 159 A ASP 160 n 139 ASP 160 A PHE 161 n 140 PHE 161 A THR 162 n 141 THR 162 A ILE 163 n 142 ILE 163 A ASN 164 n 143 ASN 164 A GLY 165 n 144 GLY 165 A ILE 166 n 145 ILE 166 A LYS 167 n 146 LYS 167 A PRO 168 n 147 PRO 168 A TRP 169 n 148 TRP 169 A ASP 170 n 149 ASP 170 A ALA 171 n 150 ALA 171 A ALA 172 n 151 ALA 172 A ALA 173 n 152 ALA 173 A PRO 174 n 153 PRO 174 A THR 175 n 154 THR 175 A ASP 176 n 155 ASP 176 A ILE 177 n 156 ILE 177 A LYS 178 n 157 LYS 178 A GLY 179 n 158 GLY 179 A SER 180 n 159 SER 180 A THR 181 n 160 THR 181 A TYR 182 n 161 TYR 182 A MET 183 n 162 MET 183 A TYR 184 n 163 TYR 184 A ALA 185 n 164 ALA 185 A GLY 186 n 165 GLY 186 A TYR 187 n 166 TYR 187 A TYR 188 n 167 TYR 188 A TYR 189 n 168 TYR 189 A PRO 190 n 169 PRO 190 A ILE 191 n 170 ILE 191 A LYS 192 n 171 LYS 192 A ILE 193 n 172 ILE 193 A VAL 194 n 173 VAL 194 A TYR 195 n 174 TYR 195 A SER 196 n 175 SER 196 A ASN 197 n 176 ASN 197 A ALA 198 n 177 ALA 198 A LYS 199 n 178 LYS 199 A ALA 200 n 179 ALA 200 A LEU 201 n 180 LEU 201 A ALA 202 n 181 ALA 202 A ARG 203 n 182 ARG 203 A LEU 204 n 183 LEU 204 A PRO 205 n 184 PRO 205 A VAL 206 n 185 VAL 206 A SER 207 n 186 SER 207 A VAL 208 n 187 VAL 208 A VAL 209 n 188 VAL 209 A LEU 210 n 189 LEU 210 A PRO 211 n 190 PRO 211 A ASP 212 n 191 ASP 212 A GLY 213 n 192 GLY 213 A THR 214 n 193 THR 214 A GLU 215 n 194 GLU 215 A VAL 216 n 195 VAL 216 A ASN 217 n 196 ASN 217 A ASP 218 n 197 ASP 218 A ASP 219 n 198 ASP 219 A PHE 220 n 199 PHE 220 A GLU 221 n 200 GLU 221 A GLY 222 n 201 GLY 222 A TYR 223 n 202 TYR 223 A VAL 224 n 203 VAL 224 A TYR 225 n 204 TYR 225 A SER 226 n 205 SER 226 A PHE 227 n 206 PHE 227 A ASP 228 n 207 ASP 228 A ASP 229 n 208 ASP 229 A ASP 230 n 209 ASP 230 A LEU 231 n 210 LEU 231 A SER 232 n 211 SER 232 A GLN 233 n 212 GLN 233 A SER 234 n 213 SER 234 A ASN 235 n 214 ASN 235 A CYS 236 n 215 CYS 236 A THR 237 n 216 THR 237 A ILE 238 n 217 ILE 238 A PRO 239 n 218 PRO 239 A ASP 240 n 219 ASP 240 A PRO 241 n 220 PRO 241 A SER 242 n 221 SER 242 A n 222 243 A n 223 244 A n 224 245 A author_and_software_defined_assembly PISA 1 monomeric A ASP 133 A OD1 ASP 112 1_555 A CA 301 B CA CA 1_555 A ASP 134 A OD1 ASP 113 1_555 65.6 A ASP 133 A OD1 ASP 112 1_555 A CA 301 B CA CA 1_555 A ASN 197 A OD1 ASN 176 1_555 109.1 A ASP 134 A OD1 ASP 113 1_555 A CA 301 B CA CA 1_555 A ASN 197 A OD1 ASN 176 1_555 76.5 A ASP 133 A OD1 ASP 112 1_555 A CA 301 B CA CA 1_555 A LYS 199 A O LYS 178 1_555 167.8 A ASP 134 A OD1 ASP 113 1_555 A CA 301 B CA CA 1_555 A LYS 199 A O LYS 178 1_555 126.3 A ASN 197 A OD1 ASN 176 1_555 A CA 301 B CA CA 1_555 A LYS 199 A O LYS 178 1_555 78.3 A ASP 133 A OD1 ASP 112 1_555 A CA 301 B CA CA 1_555 A LEU 201 A O LEU 180 1_555 86.9 A ASP 134 A OD1 ASP 113 1_555 A CA 301 B CA CA 1_555 A LEU 201 A O LEU 180 1_555 131.8 A ASN 197 A OD1 ASN 176 1_555 A CA 301 B CA CA 1_555 A LEU 201 A O LEU 180 1_555 76.4 A LYS 199 A O LYS 178 1_555 A CA 301 B CA CA 1_555 A LEU 201 A O LEU 180 1_555 85.5 A ASP 133 A OD1 ASP 112 1_555 A CA 301 B CA CA 1_555 A HOH 404 E O HOH 1_555 67.4 A ASP 134 A OD1 ASP 113 1_555 A CA 301 B CA CA 1_555 A HOH 404 E O HOH 1_555 118.0 A ASN 197 A OD1 ASN 176 1_555 A CA 301 B CA CA 1_555 A HOH 404 E O HOH 1_555 158.2 A LYS 199 A O LYS 178 1_555 A CA 301 B CA CA 1_555 A HOH 404 E O HOH 1_555 102.1 A LEU 201 A O LEU 180 1_555 A CA 301 B CA CA 1_555 A HOH 404 E O HOH 1_555 81.8 A ASN 235 GLYCOSYLATION SITE A ASN 214 ASN A ASN 108 GLYCOSYLATION SITE A ASN 87 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 28 A N ALA 7 A O ILE 238 A O ILE 217 A N LYS 36 A N LYS 15 A O SER 226 A O SER 205 A O TYR 225 A O TYR 204 A N TYR 116 A N TYR 95 A O THR 114 A O THR 93 A N ASN 40 A N ASN 19 A N VAL 41 A N VAL 20 A O VAL 73 A O VAL 52 A N LYS 36 A N LYS 15 A O SER 226 A O SER 205 A O TYR 225 A O TYR 204 A N TYR 116 A N TYR 95 A N PHE 117 A N PHE 96 A O TYR 189 A O TYR 168 A O SER 196 A O SER 175 A N SER 135 A N SER 114 A O LEU 138 A O LEU 117 A N ILE 163 A N ILE 142 A N ILE 81 A N ILE 60 A O LEU 204 A O LEU 183 A O MET 183 A O MET 162 A N GLY 123 A N GLY 102 A N LYS 128 A N LYS 107 A O SER 207 A O SER 186 A N VAL 208 A N VAL 187 A O VAL 216 A O VAL 195 1 A CD LYS 45 A CD LYS 24 1 Y 1 A CE LYS 45 A CE LYS 24 1 Y 1 A NZ LYS 45 A NZ LYS 24 1 Y 1 A CE LYS 63 A CE LYS 42 1 Y 1 A NZ LYS 63 A NZ LYS 42 1 Y 1 A CE LYS 68 A CE LYS 47 1 Y 1 A NZ LYS 68 A NZ LYS 47 1 Y 1 A OG1 THR 87 A OG1 THR 66 1 Y 1 A CG2 THR 87 A CG2 THR 66 1 Y 1 A CG PHE 89 A CG PHE 68 1 Y 1 A CD1 PHE 89 A CD1 PHE 68 1 Y 1 A CD2 PHE 89 A CD2 PHE 68 1 Y 1 A CE1 PHE 89 A CE1 PHE 68 1 Y 1 A CE2 PHE 89 A CE2 PHE 68 1 Y 1 A CZ PHE 89 A CZ PHE 68 1 Y 1 A CG TRP 90 A CG TRP 69 1 Y 1 A CD1 TRP 90 A CD1 TRP 69 1 Y 1 A CD2 TRP 90 A CD2 TRP 69 1 Y 1 A NE1 TRP 90 A NE1 TRP 69 1 Y 1 A CE2 TRP 90 A CE2 TRP 69 1 Y 1 A CE3 TRP 90 A CE3 TRP 69 1 Y 1 A CZ2 TRP 90 A CZ2 TRP 69 1 Y 1 A CZ3 TRP 90 A CZ3 TRP 69 1 Y 1 A CH2 TRP 90 A CH2 TRP 69 1 Y 1 A CG ASP 170 A CG ASP 149 1 Y 1 A OD1 ASP 170 A OD1 ASP 149 1 Y 1 A OD2 ASP 170 A OD2 ASP 149 1 Y 1 A CD GLU 215 A CD GLU 194 1 Y 1 A OE1 GLU 215 A OE1 GLU 194 1 Y 1 A OE2 GLU 215 A OE2 GLU 194 1 Y 1 A GLU 22 A GLU 1 1 Y 1 A LYS 243 A LYS 222 1 Y 1 A HIS 244 A HIS 223 1 Y 1 A THR 245 A THR 224 1 Y 1 A TYR 62 -155.49 -30.75 1 A ASN 91 -140.20 15.93 1 A THR 104 -153.63 -158.94 1 A ILE 144 -120.66 -54.62 1 A ALA 150 -145.59 44.48 1 A ASP 160 -90.53 56.70 1 A TRP 169 41.67 -113.78 1 A ALA 200 55.11 -124.03 1 A ASP 218 59.09 -68.58 69.670 19.6101 5.860 0.0100 0.0000 -0.0000 -0.0100 -0.0000 0.0000 0.9360 0.8880 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.2398 0.1862 0.1888 2.53 9.99 282 6041 4.7 94.63 1.000 1.000 10.0820 0.2170 RANDOM 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT 0.3450 0.8000 0.8000 1.2000 PDB ENTRY 2XJV MAXIMUM LIKELIHOOD MASK 2.53 9.99 39 1742 29 0 1674 0.006 0.020 1754 0.001 0.020 1515 1.020 1.969 2405 0.745 3.002 3494 6.037 5.000 219 32.763 25.000 72 14.681 15.000 238 18.907 15.000 2 0.062 0.200 268 0.004 0.021 2010 0.001 0.020 390 0.2750 0.2550 2.589 18 386 404 20 89.58 2.53 9.99 4GQ7 6260 6042 0.049 1 5.9 5.6 97.9 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.7.0029 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data reduction MOSFLM data scaling SCALA phasing PHASER Crystal structure of Lg-Flo1p 1 N N 2 N N 3 N N 3 N N 4 N N A THR 52 A THR 31 HELX_P A SER 55 A SER 34 5 1 4 A ASP 56 A ASP 35 HELX_P A TYR 62 A TYR 41 1 2 7 A LYS 63 A LYS 42 HELX_P A THR 67 A THR 46 5 3 5 A GLN 233 A GLN 212 HELX_P A ASN 235 A ASN 214 5 4 3 disulf 2.024 A CYS 29 A SG CYS 8 1_555 A CYS 148 A SG CYS 127 1_555 disulf 2.029 A CYS 149 A SG CYS 128 1_555 A CYS 236 A SG CYS 215 1_555 covale 1.454 one N-Glycosylation A ASN 108 A ND2 ASN 87 1_555 A NAG 302 C C1 NAG 1_555 covale 1.449 one N-Glycosylation A ASN 235 A ND2 ASN 214 1_555 A NAG 303 D C1 NAG 1_555 metalc 2.569 A ASP 133 A OD1 ASP 112 1_555 A CA 301 B CA CA 1_555 metalc 2.464 A ASP 134 A OD1 ASP 113 1_555 A CA 301 B CA CA 1_555 metalc 2.525 A ASN 197 A OD1 ASN 176 1_555 A CA 301 B CA CA 1_555 metalc 2.318 A LYS 199 A O LYS 178 1_555 A CA 301 B CA CA 1_555 metalc 2.513 A LEU 201 A O LEU 180 1_555 A CA 301 B CA CA 1_555 metalc 2.612 A CA 301 B CA CA 1_555 A HOH 404 E O HOH 1_555 SUGAR BINDING PROTEIN Carbohydrate binding domain, PA14 domain, SUGAR BINDING PROTEIN A ASP 133 A ASP 112 1 A ASP 134 A ASP 113 11.28 B3IUA8_SACPS UNP 1 26 B3IUA8 TQACLPVGSRKNGMNVNFYKYSLQDSTTYSDPQYMAYKYSDTKKLGSVSGQTHLSIYYGPNTAFWNTASWSSDLFGFYTT PTNVTVEMTGYFLPPQTGSYTFKFATVDDSAILSVGGSIAFECCAQEQPPITSTDFTINGIKPWDAATPTDIKGSTYMYA GYYYPIKIVYSNAKALARLPVSVVLPDGTEVNDDFEGYVYSFDDDLSQSNCTIPDPSKHT 26 245 4GQ7 26 245 B3IUA8 A 1 5 224 1 expression tag GLU 22 4GQ7 A B3IUA8 UNP 1 1 expression tag ALA 23 4GQ7 A B3IUA8 UNP 2 1 expression tag GLU 24 4GQ7 A B3IUA8 UNP 3 1 expression tag ALA 25 4GQ7 A B3IUA8 UNP 4 1 THR SEE REMARK 999 ALA 173 4GQ7 A B3IUA8 UNP 173 152 2 5 6 2 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ALA 28 A ALA 7 A CYS 29 A CYS 8 A THR 237 A THR 216 A ILE 238 A ILE 217 A LYS 36 A LYS 15 A ASN 37 A ASN 16 A VAL 224 A VAL 203 A SER 226 A SER 205 A VAL 109 A VAL 88 A PHE 117 A PHE 96 A MET 39 A MET 18 A TYR 44 A TYR 23 A LYS 69 A LYS 48 A GLN 76 A GLN 55 A LYS 36 A LYS 15 A ASN 37 A ASN 16 A VAL 224 A VAL 203 A SER 226 A SER 205 A VAL 109 A VAL 88 A PHE 117 A PHE 96 A TYR 189 A TYR 168 A ASN 197 A ASN 176 A SER 135 A SER 114 A VAL 140 A VAL 119 A ILE 163 A ILE 142 A GLY 165 A GLY 144 A ILE 81 A ILE 60 A TYR 83 A TYR 62 A ALA 202 A ALA 181 A LEU 204 A LEU 183 A THR 175 A THR 154 A MET 183 A MET 162 A GLY 123 A GLY 102 A THR 131 A THR 110 A VAL 206 A VAL 185 A VAL 209 A VAL 188 A GLU 215 A GLU 194 A ASN 217 A ASN 196 19 P 21 21 21