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1
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46.04
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1
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1
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1
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1
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31.50
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1
1
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44.44
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1
1
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34.64
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1
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A
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1
1
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1
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43.66
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1
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A
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1
1
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1
N
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1
1
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1
C
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1
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A
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1
1
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1
O
58.94
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A
N3
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1
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1
N
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1
1.00
1
C
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N4
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A
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1
1
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1
N
45.89
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1
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1
C
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1
1
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1
C
48.93
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2
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1
2
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1
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39.43
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1
2
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O
40.56
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43.10
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2
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42.24
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2
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38.61
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2
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1
2
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41.22
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2
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2
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O
35.77
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2
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36.15
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2
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34.27
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2
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33.57
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2
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2
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34.13
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1
2
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N
33.56
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1
2
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29.58
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2
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2
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N
29.58
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2
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2
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34.88
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2
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2
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38.62
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-0.750
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O
32.44
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2
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32.62
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33.31
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2
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31.52
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2
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33.91
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2
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65.06
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-56.177
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3
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33.92
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3
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3
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O
32.59
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-57.299
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3
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-58.533
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3
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-59.148
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3
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30.83
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-58.160
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3
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-0.156
-59.476
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3
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-60.800
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3
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O
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-58.444
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3
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20.59
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-58.280
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3
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30.07
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-57.093
4.064
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3
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1
3
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N
37.70
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3
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1
3
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C
43.28
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3
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3
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O
32.58
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-56.158
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3
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3
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N
33.50
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3
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3
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C
30.88
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-53.938
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3
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3
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O
34.25
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-54.753
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3
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1
3
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C
16.84
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-53.402
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3
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1
3
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C
38.80
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-55.846
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3
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1
3
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1
C
30.53
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4
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P
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1
4
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1
P
39.11
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4
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A
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1
4
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O
27.60
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-62.281
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4
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1
4
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O
29.20
-0.151
-63.239
5.830
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4
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4
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O
29.14
-0.388
-63.131
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4
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1
4
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C
37.96
-0.523
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4
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1
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C
35.59
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4
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1
4
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1
O
32.24
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4
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A
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1
4
1.00
1
C
25.76
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4
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1
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1
O
34.15
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4
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1
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1
C
33.08
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4
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1
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1
C
37.27
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N9
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N9
DA
1
4
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1
N
44.07
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-0.682
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4
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C8
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1
4
1.00
1
C
35.50
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-1.461
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4
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A
N7
DA
1
4
1.00
1
N
35.47
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-62.310
-0.731
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A
C5
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1
4
1.00
1
C
43.08
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C6
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A
C6
DA
1
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1.00
1
C
43.58
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-2.121
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4
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A
N6
DA
1
4
1.00
1
N
30.78
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4
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A
N1
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1
4
1.00
1
N
43.36
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4
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A
C2
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1
4
1.00
1
C
35.03
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4
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A
N3
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1
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1.00
1
N
35.38
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4
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C4
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1
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1.00
1
C
46.60
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5
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P
DC
1
5
1.00
1
P
49.38
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5
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1
5
1.00
1
O
42.59
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5
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1
5
1.00
1
O
40.46
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5
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1
5
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1
O
37.93
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1
5
1.00
1
C
29.80
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1
5
1.00
1
C
27.11
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5
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1
5
1.00
1
O
40.74
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DC
1
5
1.00
1
C
51.64
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5
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1
5
1.00
1
O
42.78
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5
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C2'
DC
1
5
1.00
1
C
26.07
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-64.546
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5
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A
C1'
DC
1
5
1.00
1
C
25.28
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N1
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5
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A
N1
DC
1
5
1.00
1
N
34.73
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C2
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5
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A
C2
DC
1
5
1.00
1
C
38.18
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O2
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5
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A
O2
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1
5
1.00
1
O
36.20
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N3
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5
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A
N3
DC
1
5
1.00
1
N
28.07
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C4
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5
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A
C4
DC
1
5
1.00
1
C
31.03
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-59.256
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N4
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5
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A
N4
DC
1
5
1.00
1
N
28.59
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5
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A
C5
DC
1
5
1.00
1
C
31.66
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C6
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A
C6
DC
1
5
1.00
1
C
53.97
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P
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6
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A
P
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1
6
1.00
1
P
35.57
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6
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1
6
1.00
1
O
24.32
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6
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A
OP2
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1
6
1.00
1
O
37.39
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6
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O5'
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1
6
1.00
1
O
32.55
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6
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C5'
DG
1
6
1.00
1
C
34.26
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6
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A
C4'
DG
1
6
1.00
1
C
40.81
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6
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1
6
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1
O
40.47
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6
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DG
1
6
1.00
1
C
39.40
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6
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O3'
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1
6
1.00
1
O
31.91
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6
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C2'
DG
1
6
1.00
1
C
39.01
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6
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C1'
DG
1
6
1.00
1
C
39.99
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6
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A
N9
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1
6
1.00
1
N
46.83
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6
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1
6
1.00
1
C
47.19
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6
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N7
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1
6
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1
N
36.34
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6
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A
C5
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1
6
1.00
1
C
38.50
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6
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C6
DG
1
6
1.00
1
C
42.28
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6
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O6
DG
1
6
1.00
1
O
34.85
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-61.256
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6
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A
N1
DG
1
6
1.00
1
N
38.82
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C2
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6
ATOM
A
C2
DG
1
6
1.00
1
C
34.45
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-60.873
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N2
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6
ATOM
A
N2
DG
1
6
1.00
1
N
33.77
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7.835
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N3
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6
ATOM
A
N3
DG
1
6
1.00
1
N
30.90
9.619
-63.814
8.448
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C4
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6
ATOM
A
C4
DG
1
6
1.00
1
C
45.49
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-52.994
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O5'
DC
1
ATOM
B
O5'
DC
1
1
1.00
1
O
32.25
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-54.385
12.180
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C5'
DC
1
ATOM
B
C5'
DC
1
1
1.00
1
C
28.93
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-54.689
11.010
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C4'
DC
1
ATOM
B
C4'
DC
1
1
1.00
1
C
41.13
13.569
-56.028
10.619
B
O4'
DC
1
ATOM
B
O4'
DC
1
1
1.00
1
O
30.13
13.786
-53.930
9.688
B
C3'
DC
1
ATOM
B
C3'
DC
1
1
1.00
1
C
26.81
14.837
-54.297
8.771
B
O3'
DC
1
ATOM
B
O3'
DC
1
1
1.00
1
O
31.40
12.475
-54.499
9.174
B
C2'
DC
1
ATOM
B
C2'
DC
1
1
1.00
1
C
32.82
12.679
-55.968
9.515
B
C1'
DC
1
ATOM
B
C1'
DC
1
1
1.00
1
C
25.15
11.442
-56.680
9.899
B
N1
DC
1
ATOM
B
N1
DC
1
1
1.00
1
N
35.81
11.049
-57.801
9.161
B
C2
DC
1
ATOM
B
C2
DC
1
1
1.00
1
C
46.19
11.748
-58.168
8.206
B
O2
DC
1
ATOM
B
O2
DC
1
1
1.00
1
O
38.63
9.917
-58.455
9.518
B
N3
DC
1
ATOM
B
N3
DC
1
1
1.00
1
N
31.80
9.194
-58.031
10.555
B
C4
DC
1
ATOM
B
C4
DC
1
1
1.00
1
C
28.48
8.089
-58.712
10.859
B
N4
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1
ATOM
B
N4
DC
1
1
1.00
1
N
35.75
9.579
-56.889
11.319
B
C5
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1
ATOM
B
C5
DC
1
1
1.00
1
C
33.34
10.704
-56.253
10.963
B
C6
DC
1
ATOM
B
C6
DC
1
1
1.00
1
C
49.57
15.068
-53.461
7.411
B
P
DG
2
ATOM
B
P
DG
1
2
1.00
1
P
37.85
16.501
-53.546
7.064
B
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2
ATOM
B
OP1
DG
1
2
1.00
1
O
40.03
14.378
-52.154
7.542
B
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2
ATOM
B
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1
2
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1
O
39.99
14.275
-54.295
6.317
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2
ATOM
B
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DG
1
2
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O
36.40
14.809
-55.492
5.835
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2
ATOM
B
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DG
1
2
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1
C
43.76
13.918
-55.920
4.695
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2
ATOM
B
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DG
1
2
1.00
1
C
46.87
12.711
-56.536
5.209
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2
ATOM
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DG
1
2
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1
O
41.58
13.442
-54.770
3.820
B
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2
ATOM
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DG
1
2
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1
C
50.52
13.342
-55.244
2.511
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2
ATOM
B
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DG
1
2
1.00
1
O
39.42
12.040
-54.501
4.339
B
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DG
2
ATOM
B
C2'
DG
1
2
1.00
1
C
35.63
11.589
-55.928
4.599
B
C1'
DG
2
ATOM
B
C1'
DG
1
2
1.00
1
C
36.31
10.498
-56.008
5.552
B
N9
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2
ATOM
B
N9
DG
1
2
1.00
1
N
37.57
10.097
-55.025
6.417
B
C8
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2
ATOM
B
C8
DG
1
2
1.00
1
C
34.54
9.094
-55.373
7.168
B
N7
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2
ATOM
B
N7
DG
1
2
1.00
1
N
30.37
8.822
-56.675
6.783
B
C5
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2
ATOM
B
C5
DG
1
2
1.00
1
C
39.54
7.835
-57.567
7.254
B
C6
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2
ATOM
B
C6
DG
1
2
1.00
1
C
41.16
6.986
-57.377
8.137
B
O6
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2
ATOM
B
O6
DG
1
2
1.00
1
O
43.70
7.895
-58.792
6.595
B
N1
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2
ATOM
B
N1
DG
1
2
1.00
1
N
42.72
8.795
-59.112
5.607
B
C2
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2
ATOM
B
C2
DG
1
2
1.00
1
C
40.30
8.691
-60.350
5.098
B
N2
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2
ATOM
B
N2
DG
1
2
1.00
1
N
41.05
9.728
-58.278
5.156
B
N3
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2
ATOM
B
N3
DG
1
2
1.00
1
N
36.10
9.678
-57.083
5.789
B
C4
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2
ATOM
B
C4
DG
1
2
1.00
1
C
63.11
13.908
-54.372
1.297
B
P
DT
3
ATOM
B
P
DT
1
3
1.00
1
P
53.45
14.953
-53.469
1.832
B
OP1
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3
ATOM
B
OP1
DT
1
3
1.00
1
O
47.74
12.749
-53.818
0.552
B
OP2
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3
ATOM
B
OP2
DT
1
3
1.00
1
O
42.45
14.607
-55.459
0.370
B
O5'
DT
3
ATOM
B
O5'
DT
1
3
1.00
1
O
53.74
14.653
-55.203
-1.014
B
C5'
DT
3
ATOM
B
C5'
DT
1
3
1.00
1
C
59.41
15.056
-56.466
-1.743
B
C4'
DT
3
ATOM
B
C4'
DT
1
3
1.00
1
C
71.87
16.289
-56.970
-1.176
B
O4'
DT
3
ATOM
B
O4'
DT
1
3
1.00
1
O
60.12
14.041
-57.601
-1.655
B
C3'
DT
3
ATOM
B
C3'
DT
1
3
1.00
1
C
53.10
13.794
-58.081
-2.970
B
O3'
DT
3
ATOM
B
O3'
DT
1
3
1.00
1
O
53.79
14.716
-58.652
-0.773
B
C2'
DT
3
ATOM
B
C2'
DT
1
3
1.00
1
C
58.01
16.193
-58.373
-1.024
B
C1'
DT
3
ATOM
B
C1'
DT
1
3
1.00
1
C
53.89
17.138
-58.759
0.073
B
N1
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3
ATOM
B
N1
DT
1
3
1.00
1
N
48.59
17.882
-59.918
-0.032
B
C2
DT
3
ATOM
B
C2
DT
1
3
1.00
1
C
59.31
17.813
-60.694
-0.972
B
O2
DT
3
ATOM
B
O2
DT
1
3
1.00
1
O
47.66
18.717
-60.148
1.028
B
N3
DT
3
ATOM
B
N3
DT
1
3
1.00
1
N
61.11
18.887
-59.350
2.147
B
C4
DT
3
ATOM
B
C4
DT
1
3
1.00
1
C
55.84
19.673
-59.656
3.041
B
O4
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3
ATOM
B
O4
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1
3
1.00
1
O
47.88
18.081
-58.150
2.188
B
C5
DT
3
ATOM
B
C5
DT
1
3
1.00
1
C
46.81
18.168
-57.198
3.347
B
C7
DT
3
ATOM
B
C7
DT
1
3
1.00
1
C
47.23
17.261
-57.916
1.160
B
C6
DT
3
ATOM
B
C6
DT
1
3
1.00
1
C
66.23
12.520
-57.557
-3.797
B
P
DA
4
ATOM
B
P
DA
1
4
1.00
1
P
58.55
12.534
-58.219
-5.123
B
OP1
DA
4
ATOM
B
OP1
DA
1
4
1.00
1
O
54.70
12.485
-56.073
-3.700
B
OP2
DA
4
ATOM
B
OP2
DA
1
4
1.00
1
O
58.41
11.289
-58.155
-2.983
B
O5'
DA
4
ATOM
B
O5'
DA
1
4
1.00
1
O
50.78
11.327
-59.525
-2.608
B
C5'
DA
4
ATOM
B
C5'
DA
1
4
1.00
1
C
52.68
10.015
-60.181
-2.976
B
C4'
DA
4
ATOM
B
C4'
DA
1
4
1.00
1
C
54.68
8.946
-59.610
-2.189
B
O4'
DA
4
ATOM
B
O4'
DA
1
4
1.00
1
O
55.34
9.576
-59.930
-4.404
B
C3'
DA
4
ATOM
B
C3'
DA
1
4
1.00
1
C
51.28
8.630
-60.913
-4.719
B
O3'
DA
4
ATOM
B
O3'
DA
1
4
1.00
1
O
46.89
8.914
-58.562
-4.312
B
C2'
DA
4
ATOM
B
C2'
DA
1
4
1.00
1
C
49.09
8.156
-58.765
-3.004
B
C1'
DA
4
ATOM
B
C1'
DA
1
4
1.00
1
C
40.82
7.892
-57.554
-2.244
B
N9
DA
4
ATOM
B
N9
DA
1
4
1.00
1
N
50.27
8.558
-56.359
-2.283
B
C8
DA
4
ATOM
B
C8
DA
1
4
1.00
1
C
44.90
8.062
-55.458
-1.464
B
N7
DA
4
ATOM
B
N7
DA
1
4
1.00
1
N
37.90
7.008
-56.123
-0.852
B
C5
DA
4
ATOM
B
C5
DA
1
4
1.00
1
C
32.94
6.071
-55.735
0.120
B
C6
DA
4
ATOM
B
C6
DA
1
4
1.00
1
C
39.61
6.070
-54.519
0.657
B
N6
DA
4
ATOM
B
N6
DA
1
4
1.00
1
N
30.62
5.144
-56.635
0.519
B
N1
DA
4
ATOM
B
N1
DA
1
4
1.00
1
N
30.33
5.158
-57.850
-0.031
B
C2
DA
4
ATOM
B
C2
DA
1
4
1.00
1
C
37.71
5.989
-58.334
-0.953
B
N3
DA
4
ATOM
B
N3
DA
1
4
1.00
1
N
38.54
6.892
-57.412
-1.321
B
C4
DA
4
ATOM
B
C4
DA
1
4
1.00
1
C
67.23
8.398
-61.329
-6.244
B
P
DC
5
ATOM
B
P
DC
1
5
1.00
1
P
47.07
8.494
-62.807
-6.325
B
OP1
DC
5
ATOM
B
OP1
DC
1
5
1.00
1
O
40.90
9.250
-60.443
-7.084
B
OP2
DC
5
ATOM
B
OP2
DC
1
5
1.00
1
O
65.77
6.878
-60.914
-6.517
B
O5'
DC
5
ATOM
B
O5'
DC
1
5
1.00
1
O
64.84
5.790
-61.698
-6.005
B
C5'
DC
5
ATOM
B
C5'
DC
1
5
1.00
1
C
58.20
4.563
-60.812
-5.933
B
C4'
DC
5
ATOM
B
C4'
DC
1
5
1.00
1
C
45.37
4.775
-59.814
-4.891
B
O4'
DC
5
ATOM
B
O4'
DC
1
5
1.00
1
O
48.42
4.530
-60.009
-7.230
B
C3'
DC
5
ATOM
A
B
C3'
DC
1
5
0.35
1
C
48.22
4.075
-60.113
-7.202
B
C3'
DC
5
ATOM
B
B
C3'
DC
1
5
0.40
1
C
48.05
4.206
-60.041
-7.216
B
C3'
DC
5
ATOM
C
B
C3'
DC
1
5
0.25
1
C
43.20
3.628
-60.578
-8.182
B
O3'
DC
5
ATOM
A
B
O3'
DC
1
5
0.35
1
O
46.38
2.689
-60.454
-7.484
B
O3'
DC
5
ATOM
B
B
O3'
DC
1
5
0.40
1
O
46.04
2.872
-60.334
-7.686
B
O3'
DC
5
ATOM
C
B
O3'
DC
1
5
0.25
1
O
47.35
4.173
-58.578
-6.817
B
C2'
DC
5
ATOM
A
B
C2'
DC
1
5
0.35
1
C
47.47
4.241
-58.638
-6.817
B
C2'
DC
5
ATOM
B
B
C2'
DC
1
5
0.40
1
C
47.27
4.327
-58.580
-6.792
B
C2'
DC
5
ATOM
C
B
C2'
DC
1
5
0.25
1
C
45.58
4.045
-58.684
-5.298
B
C1'
DC
5
ATOM
B
C1'
DC
1
5
1.00
1
C
43.80
4.444
-57.431
-4.542
B
N1
DC
5
ATOM
B
N1
DC
1
5
1.00
1
N
39.83
3.746
-57.103
-3.369
B
C2
DC
5
ATOM
B
C2
DC
1
5
1.00
1
C
49.20
2.852
-57.856
-2.973
B
O2
DC
5
ATOM
B
O2
DC
1
5
1.00
1
O
32.52
4.052
-55.980
-2.682
B
N3
DC
5
ATOM
B
N3
DC
1
5
1.00
1
N
40.98
5.021
-55.183
-3.125
B
C4
DC
5
ATOM
B
C4
DC
1
5
1.00
1
C
34.82
5.284
-54.084
-2.404
B
N4
DC
5
ATOM
B
N4
DC
1
5
1.00
1
N
34.53
5.746
-55.486
-4.320
B
C5
DC
5
ATOM
B
C5
DC
1
5
1.00
1
C
43.17
5.427
-56.603
-4.994
B
C6
DC
5
ATOM
B
C6
DC
1
5
1.00
1
C
41.35
4.022
-60.623
-9.740
B
P
DG
6
ATOM
A
B
P
DG
1
6
0.35
1
P
50.25
2.272
-61.962
-7.883
B
P
DG
6
ATOM
B
B
P
DG
1
6
0.40
1
P
44.62
2.290
-59.607
-9.003
B
P
DG
6
ATOM
C
B
P
DG
1
6
0.25
1
P
38.72
3.020
-59.827
-10.486
B
OP1
DG
6
ATOM
A
B
OP1
DG
1
6
0.35
1
O
45.24
2.921
-62.890
-6.929
B
OP1
DG
6
ATOM
B
B
OP1
DG
1
6
0.40
1
O
37.58
1.168
-60.424
-9.516
B
OP1
DG
6
ATOM
C
B
OP1
DG
1
6
0.25
1
O
34.58
4.281
-62.035
-10.101
B
OP2
DG
6
ATOM
A
B
OP2
DG
1
6
0.35
1
O
34.54
2.503
-62.131
-9.334
B
OP2
DG
6
ATOM
B
B
OP2
DG
1
6
0.40
1
O
36.34
3.433
-59.268
-9.882
B
OP2
DG
6
ATOM
C
B
OP2
DG
1
6
0.25
1
O
39.37
5.418
-59.841
-9.801
B
O5'
DG
6
ATOM
A
B
O5'
DG
1
6
0.35
1
O
31.91
0.696
-62.008
-7.580
B
O5'
DG
6
ATOM
B
B
O5'
DG
1
6
0.40
1
O
38.04
1.693
-58.229
-8.445
B
O5'
DG
6
ATOM
C
B
O5'
DG
1
6
0.25
1
O
28.42
6.172
-59.822
-11.010
B
C5'
DG
6
ATOM
A
B
C5'
DG
1
6
0.35
1
C
26.07
0.069
-63.247
-7.247
B
C5'
DG
6
ATOM
B
B
C5'
DG
1
6
0.40
1
C
24.90
1.123
-57.277
-9.337
B
C5'
DG
6
ATOM
C
B
C5'
DG
1
6
0.25
1
C
42.20
0.972
-46.167
11.292
A
CA1
RR2
101
HETATM
C
CA1
RR2
2
1.00
1
C
36.48
0.855
-45.355
10.160
A
CA2
RR2
101
HETATM
C
CA2
RR2
2
1.00
1
C
27.76
1.537
-44.146
10.076
A
CA3
RR2
101
HETATM
C
CA3
RR2
2
1.00
1
C
19.65
1.735
-45.831
12.335
A
NA1
RR2
101
HETATM
C
NA1
RR2
2
1.00
1
N
16.43
2.418
-44.684
12.317
A
CA4
RR2
101
HETATM
C
CA4
RR2
2
1.00
1
C
30.95
2.329
-43.778
11.150
A
CA5
RR2
101
HETATM
C
CA5
RR2
2
1.00
1
C
33.37
3.035
-42.583
11.136
A
CA6
RR2
101
HETATM
C
CA6
RR2
2
1.00
1
C
27.51
3.845
-42.192
12.203
A
CA7
RR2
101
HETATM
C
CA7
RR2
2
1.00
1
C
24.20
3.269
-44.277
13.443
A
CA8
RR2
101
HETATM
C
CA8
RR2
2
1.00
1
C
32.15
3.402
-45.038
14.550
A
NA2
RR2
101
HETATM
C
NA2
RR2
2
1.00
1
N
32.72
3.988
-42.982
13.338
A
CA9
RR2
101
HETATM
C
CA9
RR2
2
1.00
1
C
33.77
4.793
-42.585
14.400
A
CA0
RR2
101
HETATM
C
CA0
RR2
2
1.00
1
C
42.35
4.879
-43.422
15.512
A
CAA
RR2
101
HETATM
C
CAA
RR2
2
1.00
1
C
39.89
4.178
-44.632
15.562
A
CAB
RR2
101
HETATM
C
CAB
RR2
2
1.00
1
C
44.50
-0.298
-44.738
14.702
A
CB1
RR2
101
HETATM
C
CB1
RR2
2
1.00
1
C
40.08
-1.315
-44.410
15.600
A
CB2
RR2
101
HETATM
C
CB2
RR2
2
1.00
1
C
35.36
-1.342
-44.960
16.878
A
CB3
RR2
101
HETATM
C
CB3
RR2
2
1.00
1
C
29.96
0.682
-45.586
15.032
A
NB1
RR2
101
HETATM
C
NB1
RR2
2
1.00
1
N
16.78
0.715
-46.142
16.248
A
CB4
RR2
101
HETATM
C
CB4
RR2
2
1.00
1
C
35.52
-0.331
-45.837
17.245
A
CB5
RR2
101
HETATM
C
CB5
RR2
2
1.00
1
C
38.35
-0.292
-46.421
18.511
A
CB6
RR2
101
HETATM
C
CB6
RR2
2
1.00
1
C
32.39
0.721
-47.307
18.877
A
CB7
RR2
101
HETATM
C
CB7
RR2
2
1.00
1
C
18.99
1.781
-47.064
16.634
A
CB8
RR2
101
HETATM
C
CB8
RR2
2
1.00
1
C
22.88
2.761
-47.378
15.786
A
NB2
RR2
101
HETATM
C
NB2
RR2
2
1.00
1
N
29.91
1.741
-47.641
17.992
A
CB9
RR2
101
HETATM
C
CB9
RR2
2
1.00
1
C
30.61
2.749
-48.513
18.354
A
CB0
RR2
101
HETATM
C
CB0
RR2
2
1.00
1
C
40.40
3.738
-48.802
17.421
A
CBA
RR2
101
HETATM
C
CBA
RR2
2
1.00
1
C
45.05
3.723
-48.227
16.151
A
CBB
RR2
101
HETATM
C
CBB
RR2
2
1.00
1
C
52.06
7.447
-63.306
-1.831
A
CC1
RR2
101
HETATM
C
CC1
RR2
2
1.00
1
C
45.30
8.490
-63.780
-2.608
A
CC2
RR2
101
HETATM
C
CC2
RR2
2
1.00
1
C
58.49
9.576
-64.400
-2.000
A
CC3
RR2
101
HETATM
C
CC3
RR2
2
1.00
1
C
37.65
7.449
-63.425
-0.500
A
NC1
RR2
101
HETATM
C
NC1
RR2
2
1.00
1
N
46.96
8.465
-64.017
0.148
A
CC4
RR2
101
HETATM
C
CC4
RR2
2
1.00
1
C
48.00
9.607
-64.540
-0.623
A
CC5
RR2
101
HETATM
C
CC5
RR2
2
1.00
1
C
34.16
10.672
-65.153
0.025
A
CC6
RR2
101
HETATM
C
CC6
RR2
2
1.00
1
C
35.36
10.706
-65.300
1.409
A
CC7
RR2
101
HETATM
C
CC7
RR2
2
1.00
1
C
43.96
8.500
-64.171
1.621
A
CC8
RR2
101
HETATM
C
CC8
RR2
2
1.00
1
C
33.83
7.509
-63.729
2.416
A
NC2
RR2
101
HETATM
C
NC2
RR2
2
1.00
1
N
40.71
9.678
-64.836
2.214
A
CC9
RR2
101
HETATM
C
CC9
RR2
2
1.00
1
C
52.64
9.723
-64.981
3.588
A
CC0
RR2
101
HETATM
C
CC0
RR2
2
1.00
1
C
45.50
8.663
-64.496
4.346
A
CCA
RR2
101
HETATM
C
CCA
RR2
2
1.00
1
C
38.16
7.574
-63.876
3.740
A
CCB
RR2
101
HETATM
C
CCB
RR2
2
1.00
1
C
35.18
4.911
-61.117
-1.037
A
CD1
RR2
101
HETATM
C
CD1
RR2
2
1.00
1
C
40.24
3.900
-60.986
-1.992
A
CD2
RR2
101
HETATM
C
CD2
RR2
2
1.00
1
C
40.00
3.043
-62.047
-2.272
A
CD3
RR2
101
HETATM
C
CD3
RR2
2
1.00
1
C
26.65
5.087
-62.259
-0.363
A
ND1
RR2
101
HETATM
C
ND1
RR2
2
1.00
1
N
29.89
4.298
-63.332
-0.587
A
CD4
RR2
101
HETATM
C
CD4
RR2
2
1.00
1
C
39.01
3.205
-63.245
-1.588
A
CD5
RR2
101
HETATM
C
CD5
RR2
2
1.00
1
C
39.25
2.375
-64.342
-1.830
A
CD6
RR2
101
HETATM
C
CD6
RR2
2
1.00
1
C
40.48
2.538
-65.553
-1.149
A
CD7
RR2
101
HETATM
C
CD7
RR2
2
1.00
1
C
29.75
4.474
-64.618
0.136
A
CD8
RR2
101
HETATM
C
CD8
RR2
2
1.00
1
C
25.02
5.431
-64.796
1.071
A
ND2
RR2
101
HETATM
C
ND2
RR2
2
1.00
1
N
36.61
3.542
-65.728
-0.195
A
CD9
RR2
101
HETATM
C
CD9
RR2
2
1.00
1
C
34.97
3.696
-66.932
0.475
A
CD0
RR2
101
HETATM
C
CD0
RR2
2
1.00
1
C
41.53
4.713
-67.041
1.425
A
CDA
RR2
101
HETATM
C
CDA
RR2
2
1.00
1
C
37.73
5.560
-65.966
1.702
A
CDB
RR2
101
HETATM
C
CDB
RR2
2
1.00
1
C
36.22
2.202
-46.502
14.179
A
RU1
RR2
101
HETATM
C
RU1
RR2
2
1.00
1
RU
41.70
6.309
-63.004
1.040
A
RU2
RR2
101
HETATM
C
RU2
RR2
2
1.00
1
RU
34.98
4.368
-55.205
6.921
A
C11
RR2
101
HETATM
C
C11
RR2
2
1.00
1
C
31.42
4.108
-56.512
6.511
A
C10
RR2
101
HETATM
C
C10
RR2
2
1.00
1
C
35.61
5.386
-54.557
6.224
A
C12
RR2
101
HETATM
C
C12
RR2
2
1.00
1
C
31.52
6.116
-55.184
5.203
A
C13
RR2
101
HETATM
C
C13
RR2
2
1.00
1
C
30.93
5.868
-56.481
4.814
A
C9B
RR2
101
HETATM
C
C9B
RR2
2
1.00
1
C
29.74
4.855
-57.122
5.490
A
C9A
RR2
101
HETATM
C
C9A
RR2
2
1.00
1
C
39.14
4.586
-58.387
5.142
A
N9
RR2
101
HETATM
C
N9
RR2
2
1.00
1
N
36.89
6.582
-57.102
3.816
A
N14
RR2
101
HETATM
C
N14
RR2
2
1.00
1
N
32.79
6.286
-58.390
3.473
A
C8C
RR2
101
HETATM
C
C8C
RR2
2
1.00
1
C
29.43
6.970
-59.200
2.404
A
C8D
RR2
101
HETATM
C
C8D
RR2
2
1.00
1
C
29.55
6.583
-60.528
2.130
A
C4A
RR2
101
HETATM
C
C4A
RR2
2
1.00
1
C
21.66
7.144
-61.311
1.188
A
N4
RR2
101
HETATM
C
N4
RR2
2
1.00
1
N
39.50
8.131
-60.795
0.471
A
C3
RR2
101
HETATM
C
C3
RR2
2
1.00
1
C
46.26
8.564
-59.479
0.689
A
C2
RR2
101
HETATM
C
C2
RR2
2
1.00
1
C
32.45
7.988
-58.666
1.658
A
C1
RR2
101
HETATM
C
C1
RR2
2
1.00
1
C
35.48
5.268
-59.012
4.166
A
C8B
RR2
101
HETATM
C
C8B
RR2
2
1.00
1
C
30.85
4.899
-60.409
3.843
A
C8A
RR2
101
HETATM
C
C8A
RR2
2
1.00
1
C
32.93
5.559
-61.116
2.850
A
C4B
RR2
101
HETATM
C
C4B
RR2
2
1.00
1
C
22.85
3.891
-61.008
4.552
A
C8
RR2
101
HETATM
C
C8
RR2
2
1.00
1
C
30.09
3.580
-62.305
4.227
A
C7
RR2
101
HETATM
C
C7
RR2
2
1.00
1
C
33.15
4.270
-62.984
3.220
A
C6
RR2
101
HETATM
C
C6
RR2
2
1.00
1
C
28.96
5.236
-62.381
2.558
A
N5
RR2
101
HETATM
C
N5
RR2
2
1.00
1
N
29.18
3.550
-54.436
7.966
A
C31
RR2
101
HETATM
C
C31
RR2
2
1.00
1
C
30.44
4.113
-53.273
8.535
A
C30
RR2
101
HETATM
C
C30
RR2
2
1.00
1
C
33.49
2.200
-54.690
8.224
A
C32
RR2
101
HETATM
C
C32
RR2
2
1.00
1
C
44.61
1.497
-53.884
9.140
A
C33
RR2
101
HETATM
C
C33
RR2
2
1.00
1
C
36.94
2.093
-52.770
9.759
A
C9D
RR2
101
HETATM
C
C9D
RR2
2
1.00
1
C
38.66
3.422
-52.453
9.454
A
C9C
RR2
101
HETATM
C
C9C
RR2
2
1.00
1
C
37.83
4.024
-51.357
10.050
A
N29
RR2
101
HETATM
C
N29
RR2
2
1.00
1
N
33.52
1.408
-51.981
10.643
A
N
RR2
101
HETATM
C
N
RR2
2
1.00
1
N
33.90
2.008
-50.889
11.230
A
C8G
RR2
101
HETATM
C
C8G
RR2
2
1.00
1
C
33.88
1.286
-49.997
12.206
A
C8H
RR2
101
HETATM
C
C8H
RR2
2
1.00
1
C
33.14
1.895
-48.894
12.802
A
C4C
RR2
101
HETATM
C
C4C
RR2
2
1.00
1
C
28.22
1.275
-48.095
13.673
A
N24
RR2
101
HETATM
C
N24
RR2
2
1.00
1
N
36.57
0.016
-48.310
14.022
A
C23
RR2
101
HETATM
C
C23
RR2
2
1.00
1
C
39.58
-0.658
-49.389
13.470
A
C22
RR2
101
HETATM
C
C22
RR2
2
1.00
1
C
31.62
-0.026
-50.241
12.558
A
C21
RR2
101
HETATM
C
C21
RR2
2
1.00
1
C
34.30
3.340
-50.563
10.936
A
C8F
RR2
101
HETATM
C
C8F
RR2
2
1.00
1
C
38.07
3.941
-49.349
11.621
A
C8E
RR2
101
HETATM
C
C8E
RR2
2
1.00
1
C
36.28
3.192
-48.563
12.529
A
C4D
RR2
101
HETATM
C
C4D
RR2
2
1.00
1
C
33.86
5.250
-48.975
11.378
A
C28
RR2
101
HETATM
C
C28
RR2
2
1.00
1
C
41.02
5.718
-47.853
12.053
A
C27
RR2
101
HETATM
C
C27
RR2
2
1.00
1
C
37.23
4.899
-47.130
12.940
A
C26
RR2
101
HETATM
C
C26
RR2
2
1.00
1
C
27.54
3.635
-47.473
13.192
A
N25
RR2
101
HETATM
C
N25
RR2
2
1.00
1
N
24.02
14.086
-65.362
4.632
A
O
HOH
201
HETATM
D
O
HOH
3
1.00
1
O
42.81
-1.769
-62.822
10.840
A
O
HOH
202
HETATM
D
O
HOH
3
1.00
1
O
38.97
12.297
-63.039
5.348
A
O
HOH
203
HETATM
D
O
HOH
3
1.00
1
O
39.57
7.917
-68.197
-0.063
A
O
HOH
204
HETATM
D
O
HOH
3
1.00
1
O
40.82
6.578
-68.712
3.691
A
O
HOH
205
HETATM
D
O
HOH
3
1.00
1
O
44.30
8.407
-68.445
11.127
A
O
HOH
206
HETATM
D
O
HOH
3
1.00
1
O
40.90
6.146
-67.244
-2.236
A
O
HOH
207
HETATM
D
O
HOH
3
1.00
1
O
35.20
-0.431
-68.442
-0.084
A
O
HOH
208
HETATM
D
O
HOH
3
1.00
1
O
36.87
-2.886
-68.987
4.540
A
O
HOH
209
HETATM
D
O
HOH
3
1.00
1
O
45.07
-2.649
-67.963
1.760
A
O
HOH
210
HETATM
D
O
HOH
3
1.00
1
O
39.19
-1.669
-52.256
8.833
A
O
HOH
211
HETATM
D
O
HOH
3
1.00
1
O
39.76
11.463
-61.744
0.704
A
O
HOH
212
HETATM
D
O
HOH
3
1.00
1
O
44.37
5.293
-64.933
-4.384
B
O
HOH
101
HETATM
E
O
HOH
3
1.00
1
O
42.37
10.443
-52.821
-1.160
B
O
HOH
102
HETATM
E
O
HOH
3
1.00
1
O
42.87
12.705
-59.136
5.560
B
O
HOH
103
HETATM
E
O
HOH
3
1.00
1
O
53.38
11.632
-53.797
-3.097
B
O
HOH
104
HETATM
E
O
HOH
3
1.00
1
O
0.011706
0.000000
0.000000
0.000000
0.011706
0.000000
0.000000
0.000000
0.011706
0.00000
0.00000
0.00000
Boer, D.R.
Coll, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
48
90.00
90.00
90.00
85.429
85.429
85.429
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
C84 H50 N16 Ru2
1485.543
(mu-11,11'-bidipyrido[3,2-a:2',3'-c]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~4'~,N~5'~)[tetrakis(1,10-phenanthroline-kappa~2~N~1~,N~10~)]diruthenium
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
Y
147
N
C
Y
148
N
C
Y
149
N
C
Y
150
N
N
Y
151
N
C
Y
152
N
C
Y
153
N
C
Y
154
N
C
Y
155
N
C
Y
156
N
N
Y
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
Y
162
N
C
Y
163
N
C
Y
164
N
N
Y
165
N
C
Y
166
N
C
Y
167
N
C
Y
168
N
C
Y
169
N
C
Y
170
N
N
Y
171
N
C
Y
172
N
C
Y
173
N
C
Y
174
N
C
Y
175
N
C
Y
176
N
C
Y
177
N
C
Y
178
N
N
Y
179
N
C
Y
180
N
C
Y
181
N
C
Y
182
N
C
Y
183
N
C
Y
184
N
N
Y
185
N
C
Y
186
N
C
Y
187
N
C
Y
188
N
C
Y
189
N
C
Y
190
N
C
Y
191
N
C
Y
192
N
N
Y
193
N
C
Y
194
N
C
Y
195
N
C
Y
196
N
C
Y
197
N
C
Y
198
N
N
Y
199
N
C
Y
200
N
C
Y
201
N
C
Y
202
N
C
N
203
N
RU
N
204
N
RU
Y
205
N
C
Y
206
N
C
Y
207
N
C
Y
208
N
C
Y
209
N
C
Y
210
N
C
Y
211
N
N
Y
212
N
N
Y
213
N
C
Y
214
N
C
Y
215
N
C
Y
216
N
N
Y
217
N
C
Y
218
N
C
Y
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
Y
223
N
C
Y
224
N
C
Y
225
N
C
Y
226
N
N
Y
227
N
C
Y
228
N
C
Y
229
N
C
Y
230
N
C
Y
231
N
C
Y
232
N
C
Y
233
N
N
Y
234
N
N
Y
235
N
C
Y
236
N
C
Y
237
N
C
Y
238
N
N
Y
239
N
C
Y
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
Y
247
N
C
Y
248
N
N
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
Y
152
N
doub
N
153
N
sing
Y
154
N
sing
N
155
N
sing
Y
156
N
doub
Y
157
N
sing
N
158
N
sing
N
159
N
sing
Y
160
N
sing
Y
161
N
doub
Y
162
N
sing
Y
163
N
doub
Y
164
N
sing
N
165
N
sing
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
Y
169
N
doub
Y
170
N
sing
Y
171
N
sing
Y
172
N
doub
N
173
N
sing
Y
174
N
sing
N
175
N
sing
N
176
N
sing
Y
177
N
doub
Y
178
N
sing
N
179
N
sing
Y
180
N
doub
N
181
N
sing
Y
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
sing
Y
187
N
doub
Y
188
N
sing
N
189
N
sing
N
190
N
sing
Y
191
N
sing
Y
192
N
doub
Y
193
N
sing
Y
194
N
sing
Y
195
N
doub
N
196
N
sing
Y
197
N
doub
N
198
N
sing
Y
199
N
sing
N
200
N
sing
Y
201
N
doub
N
202
N
sing
Y
203
N
doub
Y
204
N
sing
N
205
N
sing
Y
206
N
sing
N
207
N
sing
Y
208
N
sing
N
209
N
sing
Y
210
N
doub
Y
211
N
doub
Y
212
N
sing
Y
213
N
sing
N
214
N
sing
Y
215
N
doub
N
216
N
sing
Y
217
N
sing
Y
218
N
sing
Y
219
N
doub
Y
220
N
sing
Y
221
N
doub
N
222
N
sing
N
223
N
sing
Y
224
N
sing
N
225
N
sing
Y
226
N
doub
N
227
N
sing
Y
228
N
sing
N
229
N
sing
Y
230
N
doub
Y
231
N
sing
N
232
N
sing
N
233
N
sing
Y
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
doub
Y
238
N
sing
N
239
N
sing
Y
240
N
doub
N
241
N
sing
Y
242
N
sing
Y
243
N
doub
Y
244
N
sing
Y
245
N
sing
Y
246
N
doub
N
247
N
sing
Y
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
Y
266
N
sing
Y
267
N
doub
Y
268
N
sing
Y
269
N
sing
Y
270
N
doub
Y
271
N
sing
Y
272
N
sing
Y
273
N
sing
Y
274
N
sing
Y
275
N
doub
Y
276
N
doub
Y
277
N
sing
N
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
doub
N
282
N
sing
Y
283
N
doub
Y
284
N
sing
Y
285
N
doub
Y
286
N
sing
N
287
N
sing
Y
288
N
sing
N
289
N
sing
Y
290
N
doub
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
doub
Y
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
N
301
N
sing
Y
302
N
sing
Y
303
N
sing
Y
304
N
sing
Y
305
N
doub
Y
306
N
doub
Y
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
doub
Y
311
N
sing
N
312
N
sing
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
sing
N
317
N
sing
Y
318
N
sing
Y
319
N
sing
Y
320
N
sing
Y
321
N
sing
Y
322
N
doub
Y
323
N
doub
Y
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
GE
Angew.Chem.Int.Ed.Engl.
9999
1433-7851
53
1949
1952
10.1002/anie.201308070
24449275
Thread Insertion of a Bis(dipyridophenazine) Diruthenium Complex into the DNA Double Helix by the Extrusion of AT Base Pairs and Cross-Linking of DNA Duplexes.
2014
10.2210/pdb4gqj/pdb
pdb_00004gqj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-06-14
ADSC QUANTUM 315r
channel-cut Si(111) crystal
SINGLE WAVELENGTH
M
x-ray
1
1.07205
1.0
ID29
ESRF
1.07205
SYNCHROTRON
ESRF BEAMLINE ID29
1809.217
DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
2
syn
polymer
Synthesized by citation authors
1485.543
(mu-11,11'-bidipyrido[3,2-a:2',3'-c]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~4'~,N~5'~)[tetrakis(1,10-phenanthroline-kappa~2~N~1~,N~10~)]diruthenium
1
syn
non-polymer
Synthesized by citation authors
18.015
water
16
nat
water
no
no
(DC)(DG)(DT)(DA)(DC)(DG)
CGTACG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
1
7.18
82.87
VAPOR DIFFUSION, SITTING DROP
8.0
buffer:
0.2 M KCl
10 mM MgCl2
35% hexanediol
50 mM TRIS.HCl pH 8
drop composition:
0.5 ul 10 mM binuclear Ru compound
0.5 ul 10 mM [ssDNA] 5'-d(CGTACG)-3'
1 ul cryst. buffer
0.5 ul , VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
-16.754
1
19
A
2
B
5
1.718
A_DG2:DC5_B
1
16.736
0.133
-0.676
0.052
7.213
1
20
A
3
B
4
2.185
A_DT3:DA4_B
2
8.564
-0.018
-0.226
-0.031
0.161
1
19
A
5
B
2
-0.325
A_DC5:DG2_B
3
20.340
-0.010
-0.237
-0.137
33.760
1
19
A
6
B
1
-0.517
A_DG6:DC1_B
4
7.144
0.196
0.442
0.100
2.747
22.160
A
A
2
3
12.642
B
B
5
4
2.793
4.808
-0.411
-0.046
AA_DG2DT3:DA4DC5_BB
1
-2.856
7.510
21.452
-1.688
0.138
6.888
60.780
A
A
3
5
4.788
B
B
4
2
6.754
4.825
-0.247
2.501
AA_DT3DC5:DG2DA4_BB
2
-9.058
8.988
59.989
1.983
-0.673
2.712
33.070
A
A
5
6
-8.391
B
B
2
1
2.806
-4.751
-0.462
0.722
AA_DC5DG6:DC1DG2_BB
3
-3.737
6.600
32.528
1.952
0.274
chem_comp_atom
chem_comp_bond
database_2
struct_site
entity
pdbx_entity_src_syn
repository
Initial release
Data collection
Database references
Derived calculations
Source and taxonomy
Structure summary
1
0
2014-03-05
1
1
2024-02-28
1
2
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_entity.details
mononuclear Ru-dppz bound to DNA
mononuclear Ru-dppz bound to DNA
mononuclear Ru-dppz bound to DNA
mononuclear Ru-dppz bound to DNA
mononuclear Ru-dppz bound to DNA
RCSB
Y
RCSB
2012-08-23
REL
REL
RR2
(mu-11,11'-bidipyrido[3,2-a:2',3'-c]phenazine-1kappa~2~N~4~,N~5~:2kappa~2~N~4'~,N~5'~)[tetrakis(1,10-phenanthroline-kappa~2~N~1~,N~10~)]diruthenium
HOH
water
Acquired from biomers (Germany)
sample
RR2
1
2
RR2
RR2
101
A
HOH
2
3
HOH
HOH
201
A
HOH
5
3
HOH
HOH
202
A
HOH
12
3
HOH
HOH
203
A
HOH
13
3
HOH
HOH
204
A
HOH
20
3
HOH
HOH
205
A
HOH
21
3
HOH
HOH
206
A
HOH
22
3
HOH
HOH
207
A
HOH
27
3
HOH
HOH
208
A
HOH
28
3
HOH
HOH
209
A
HOH
29
3
HOH
HOH
210
A
HOH
30
3
HOH
HOH
211
A
HOH
31
3
HOH
HOH
212
A
HOH
1
3
HOH
HOH
101
B
HOH
6
3
HOH
HOH
102
B
HOH
14
3
HOH
HOH
103
B
HOH
18
3
HOH
HOH
104
B
DC
1
n
1
DC
1
A
DG
2
n
2
DG
2
A
DT
3
n
3
DT
3
A
DA
4
n
4
DA
4
A
DC
5
n
5
DC
5
A
DG
6
n
6
DG
6
A
DC
1
n
1
DC
1
B
DG
2
n
2
DG
2
B
DT
3
n
3
DT
3
B
DA
4
n
4
DA
4
B
DC
5
n
5
DC
5
B
DG
6
n
6
DG
6
B
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
13_545
y+3/4,x-3/4,-z+1/4
crystal symmetry operation
64.0717500000
-64.0717500000
21.3572500000
1
B
C4'
DG
6
B
C4'
DG
6
1
Y
1
B
O4'
DG
6
B
O4'
DG
6
1
Y
1
B
C3'
DG
6
B
C3'
DG
6
1
Y
1
B
O3'
DG
6
B
O3'
DG
6
1
Y
1
B
C2'
DG
6
B
C2'
DG
6
1
Y
1
B
C1'
DG
6
B
C1'
DG
6
1
Y
1
B
N9
DG
6
B
N9
DG
6
1
Y
1
B
C8
DG
6
B
C8
DG
6
1
Y
1
B
N7
DG
6
B
N7
DG
6
1
Y
1
B
C5
DG
6
B
C5
DG
6
1
Y
1
B
C6
DG
6
B
C6
DG
6
1
Y
1
B
O6
DG
6
B
O6
DG
6
1
Y
1
B
N1
DG
6
B
N1
DG
6
1
Y
1
B
C2
DG
6
B
C2
DG
6
1
Y
1
B
N2
DG
6
B
N2
DG
6
1
Y
1
B
N3
DG
6
B
N3
DG
6
1
Y
1
B
C4
DG
6
B
C4
DG
6
1
Y
1
2.52
0.30
108.30
110.82
A
A
A
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
-5.24
0.70
108.00
102.76
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
-5.25
0.80
102.40
97.15
A
A
A
C3'
C2'
C1'
DC
DC
DC
5
5
5
N
1
2.61
0.30
108.30
110.91
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
-2.80
0.40
104.50
101.70
B
B
B
O4'
C4'
C3'
DC
DC
DC
1
1
1
N
1
4.23
0.30
108.30
112.53
B
B
B
O4'
C1'
N1
DC
DC
DC
5
5
5
N
-0.0000
-0.0000
-0.0000
0.0000
0.0000
-0.0000
0.2065
0.1773
0.1786
2.951
38.205
104
2419
2396
4.34
95.34
0.29
RANDOM
1
1.36
SAD
19.82
0.72
1.00
ML
FLAT BULK SOLVENT MODEL
19.848
0.272
2.951
38.205
16
341
102
223
0
0.007
383
1.390
579
34.982
123
0.085
51
0.007
17
0.2065
0.1773
104
2292
95.00
73.4
2.95
50
4GQJ
2419
2419
0.0
-3.0
0.118
1
10.3
4.4
97
0.62
2.95
3.11
2.1
343
1
4.6
99
data collection
MxCuBE
phasing
SHELXS
refinement
PHENIX
(phenix.refine: 1.7.1_743)
data reduction
MOSFLM
data scaling
SCALA
Complex of a binuclear Ruthenium compound D,D-([mu-(11,11')-bi(dppz)-(1,10-phenanthroline)4-Ru2]4+) bound to d(CGTACG)
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
5
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
5
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
5
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DT
3
A
N3
DT
3
1_555
B
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
3
A
O4
DT
3
1_555
B
DA
4
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
2
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
2
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
2
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
1
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
1
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
1
B
N4
DC
1
1_555
DNA
DNA recognition, DNA binsinf, DNA
4GQJ
PDB
1
4GQJ
CGTACG
1
6
4GQJ
1
6
4GQJ
A
1
1
6
1
6
4GQJ
1
6
4GQJ
B
1
1
6
BINDING SITE FOR RESIDUE RR2 A 101
A
RR2
101
Software
15
A
DC
1
A
DC
1
15
8_544
A
DG
2
A
DG
2
15
8_544
A
DT
3
A
DT
3
15
8_544
A
DT
3
A
DT
3
15
1_555
A
DA
4
A
DA
4
15
8_544
A
DA
4
A
DA
4
15
1_555
A
DC
5
A
DC
5
15
1_555
A
DG
6
A
DG
6
15
1_555
A
DG
6
A
DG
6
15
13_545
B
DC
1
B
DC
1
15
13_545
B
DG
2
B
DG
2
15
1_555
B
DT
3
B
DT
3
15
13_545
B
DA
4
B
DA
4
15
1_555
B
DC
5
B
DC
5
15
1_555
B
DC
5
B
DC
5
15
8_544
213
P 41 3 2