0.018125
0.000000
0.000000
0.000000
0.018125
0.000000
0.000000
0.000000
0.011348
0.000000
0.000000
0.000000
Kemege, K.
Hickey, J.
Lovell, S.
Battaile, K.P.
Hefty, P.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
55.171
55.171
88.120
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
C
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
To be Published
0353
Crystal structure of a helix-turn-helix containing hypothetical protein (CT009) from Chlamydia trachomatis in a sub-domain swap conformation
10.2210/pdb4gqm/pdb
pdb_00004gqm
100
1
PIXEL
2011-12-03
DECTRIS PILATUS 6M
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
17-ID
APS
1.0000
SYNCHROTRON
APS BEAMLINE 17-ID
13391.338
CT009
UNP residues 1-116
1
man
polymer
18.015
water
111
nat
water
no
no
GHMSEHVHKELLHLGEVFRSQREERALSLKDVEAATSIRLSALEAIEAGHLGKLISPVYAQGFMKKYAAFLDMDGDRLLK
EHPYVLKIFQEFSDQNMDMLLDLESMGGRNSPEKAIRS
GHMSEHVHKELLHLGEVFRSQREERALSLKDVEAATSIRLSALEAIEAGHLGKLISPVYAQGFMKKYAAFLDMDGDRLLK
EHPYVLKIFQEFSDQNMDMLLDLESMGGRNSPEKAIRS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
L2/434/Bu
sample
CTL0264
471472
Chlamydia trachomatis
469008
Escherichia coli
BL21(DE3)
plasmid
pET21b
1
2.50
50.87
VAPOR DIFFUSION
8.5
30% w/v PEG4000, 0.1 M Tris, pH 8.5, 0.2 M magnesium chloride, VAPOR DIFFUSION, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
pdbx_initial_refinement_model
repository
Initial release
Refinement description
Data collection
Database references
Refinement description
1
0
2013-08-28
1
1
2017-11-15
1
2
2024-02-28
1
3
2024-04-03
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2012-08-23
REL
REL
HOH
water
COMPUTATIONAL MODEL GENERATED FROM THE PROGRAM MODELLER
Modeller
in silico model
HOH
1
2
HOH
HOH
201
A
HOH
2
2
HOH
HOH
202
A
HOH
3
2
HOH
HOH
203
A
HOH
4
2
HOH
HOH
204
A
HOH
5
2
HOH
HOH
205
A
HOH
6
2
HOH
HOH
206
A
HOH
7
2
HOH
HOH
207
A
HOH
8
2
HOH
HOH
208
A
HOH
9
2
HOH
HOH
209
A
HOH
10
2
HOH
HOH
210
A
HOH
11
2
HOH
HOH
211
A
HOH
12
2
HOH
HOH
212
A
HOH
13
2
HOH
HOH
213
A
HOH
14
2
HOH
HOH
214
A
HOH
15
2
HOH
HOH
215
A
HOH
16
2
HOH
HOH
216
A
HOH
17
2
HOH
HOH
217
A
HOH
18
2
HOH
HOH
218
A
HOH
19
2
HOH
HOH
219
A
HOH
20
2
HOH
HOH
220
A
HOH
21
2
HOH
HOH
221
A
HOH
22
2
HOH
HOH
222
A
HOH
23
2
HOH
HOH
223
A
HOH
24
2
HOH
HOH
224
A
HOH
25
2
HOH
HOH
225
A
HOH
26
2
HOH
HOH
226
A
HOH
27
2
HOH
HOH
227
A
HOH
28
2
HOH
HOH
228
A
HOH
29
2
HOH
HOH
229
A
HOH
30
2
HOH
HOH
230
A
HOH
31
2
HOH
HOH
231
A
HOH
32
2
HOH
HOH
232
A
HOH
33
2
HOH
HOH
233
A
HOH
34
2
HOH
HOH
234
A
HOH
35
2
HOH
HOH
235
A
HOH
36
2
HOH
HOH
236
A
HOH
37
2
HOH
HOH
237
A
HOH
38
2
HOH
HOH
238
A
HOH
39
2
HOH
HOH
239
A
HOH
40
2
HOH
HOH
240
A
HOH
41
2
HOH
HOH
241
A
HOH
42
2
HOH
HOH
242
A
HOH
43
2
HOH
HOH
243
A
HOH
44
2
HOH
HOH
244
A
HOH
45
2
HOH
HOH
245
A
HOH
46
2
HOH
HOH
246
A
HOH
47
2
HOH
HOH
247
A
HOH
48
2
HOH
HOH
248
A
HOH
49
2
HOH
HOH
249
A
HOH
50
2
HOH
HOH
250
A
HOH
51
2
HOH
HOH
251
A
HOH
52
2
HOH
HOH
252
A
HOH
53
2
HOH
HOH
253
A
HOH
54
2
HOH
HOH
254
A
HOH
55
2
HOH
HOH
255
A
HOH
56
2
HOH
HOH
256
A
HOH
57
2
HOH
HOH
257
A
HOH
58
2
HOH
HOH
258
A
HOH
59
2
HOH
HOH
259
A
HOH
60
2
HOH
HOH
260
A
HOH
61
2
HOH
HOH
261
A
HOH
62
2
HOH
HOH
262
A
HOH
63
2
HOH
HOH
263
A
HOH
64
2
HOH
HOH
264
A
HOH
65
2
HOH
HOH
265
A
HOH
66
2
HOH
HOH
266
A
HOH
67
2
HOH
HOH
267
A
HOH
68
2
HOH
HOH
268
A
HOH
69
2
HOH
HOH
269
A
HOH
70
2
HOH
HOH
270
A
HOH
71
2
HOH
HOH
271
A
HOH
72
2
HOH
HOH
272
A
HOH
73
2
HOH
HOH
273
A
HOH
74
2
HOH
HOH
274
A
HOH
75
2
HOH
HOH
275
A
HOH
76
2
HOH
HOH
276
A
HOH
77
2
HOH
HOH
277
A
HOH
78
2
HOH
HOH
278
A
HOH
79
2
HOH
HOH
279
A
HOH
80
2
HOH
HOH
280
A
HOH
81
2
HOH
HOH
281
A
HOH
82
2
HOH
HOH
282
A
HOH
83
2
HOH
HOH
283
A
HOH
84
2
HOH
HOH
284
A
HOH
85
2
HOH
HOH
285
A
HOH
86
2
HOH
HOH
286
A
HOH
87
2
HOH
HOH
287
A
HOH
88
2
HOH
HOH
288
A
HOH
89
2
HOH
HOH
289
A
HOH
90
2
HOH
HOH
290
A
HOH
91
2
HOH
HOH
291
A
HOH
92
2
HOH
HOH
292
A
HOH
93
2
HOH
HOH
293
A
HOH
94
2
HOH
HOH
294
A
HOH
95
2
HOH
HOH
295
A
HOH
96
2
HOH
HOH
296
A
HOH
97
2
HOH
HOH
297
A
HOH
98
2
HOH
HOH
298
A
HOH
99
2
HOH
HOH
299
A
HOH
100
2
HOH
HOH
300
A
HOH
101
2
HOH
HOH
301
A
HOH
102
2
HOH
HOH
302
A
HOH
103
2
HOH
HOH
303
A
HOH
104
2
HOH
HOH
304
A
HOH
105
2
HOH
HOH
305
A
HOH
106
2
HOH
HOH
306
A
HOH
107
2
HOH
HOH
307
A
HOH
108
2
HOH
HOH
308
A
HOH
109
2
HOH
HOH
309
A
HOH
110
2
HOH
HOH
310
A
HOH
111
2
HOH
HOH
311
A
GLY
-1
n
1
GLY
-1
A
HIS
0
n
2
HIS
0
A
MET
1
n
3
MET
1
A
SER
2
n
4
SER
2
A
GLU
3
n
5
GLU
3
A
HIS
4
n
6
HIS
4
A
VAL
5
n
7
VAL
5
A
HIS
6
n
8
HIS
6
A
LYS
7
n
9
LYS
7
A
GLU
8
n
10
GLU
8
A
LEU
9
n
11
LEU
9
A
LEU
10
n
12
LEU
10
A
HIS
11
n
13
HIS
11
A
LEU
12
n
14
LEU
12
A
GLY
13
n
15
GLY
13
A
GLU
14
n
16
GLU
14
A
VAL
15
n
17
VAL
15
A
PHE
16
n
18
PHE
16
A
ARG
17
n
19
ARG
17
A
SER
18
n
20
SER
18
A
GLN
19
n
21
GLN
19
A
ARG
20
n
22
ARG
20
A
GLU
21
n
23
GLU
21
A
GLU
22
n
24
GLU
22
A
ARG
23
n
25
ARG
23
A
ALA
24
n
26
ALA
24
A
LEU
25
n
27
LEU
25
A
SER
26
n
28
SER
26
A
LEU
27
n
29
LEU
27
A
LYS
28
n
30
LYS
28
A
ASP
29
n
31
ASP
29
A
VAL
30
n
32
VAL
30
A
GLU
31
n
33
GLU
31
A
ALA
32
n
34
ALA
32
A
ALA
33
n
35
ALA
33
A
THR
34
n
36
THR
34
A
SER
35
n
37
SER
35
A
ILE
36
n
38
ILE
36
A
ARG
37
n
39
ARG
37
A
LEU
38
n
40
LEU
38
A
SER
39
n
41
SER
39
A
ALA
40
n
42
ALA
40
A
LEU
41
n
43
LEU
41
A
GLU
42
n
44
GLU
42
A
ALA
43
n
45
ALA
43
A
ILE
44
n
46
ILE
44
A
GLU
45
n
47
GLU
45
A
ALA
46
n
48
ALA
46
A
GLY
47
n
49
GLY
47
A
HIS
48
n
50
HIS
48
A
LEU
49
n
51
LEU
49
A
GLY
50
n
52
GLY
50
A
LYS
51
n
53
LYS
51
A
LEU
52
n
54
LEU
52
A
ILE
53
n
55
ILE
53
A
SER
54
n
56
SER
54
A
PRO
55
n
57
PRO
55
A
VAL
56
n
58
VAL
56
A
TYR
57
n
59
TYR
57
A
ALA
58
n
60
ALA
58
A
GLN
59
n
61
GLN
59
A
GLY
60
n
62
GLY
60
A
PHE
61
n
63
PHE
61
A
MET
62
n
64
MET
62
A
LYS
63
n
65
LYS
63
A
LYS
64
n
66
LYS
64
A
TYR
65
n
67
TYR
65
A
ALA
66
n
68
ALA
66
A
ALA
67
n
69
ALA
67
A
PHE
68
n
70
PHE
68
A
LEU
69
n
71
LEU
69
A
ASP
70
n
72
ASP
70
A
MET
71
n
73
MET
71
A
ASP
72
n
74
ASP
72
A
GLY
73
n
75
GLY
73
A
ASP
74
n
76
ASP
74
A
ARG
75
n
77
ARG
75
A
LEU
76
n
78
LEU
76
A
LEU
77
n
79
LEU
77
A
LYS
78
n
80
LYS
78
A
GLU
79
n
81
GLU
79
A
HIS
80
n
82
HIS
80
A
PRO
81
n
83
PRO
81
A
TYR
82
n
84
TYR
82
A
VAL
83
n
85
VAL
83
A
LEU
84
n
86
LEU
84
A
LYS
85
n
87
LYS
85
A
ILE
86
n
88
ILE
86
A
PHE
87
n
89
PHE
87
A
GLN
88
n
90
GLN
88
A
GLU
89
n
91
GLU
89
A
PHE
90
n
92
PHE
90
A
SER
91
n
93
SER
91
A
ASP
92
n
94
ASP
92
A
GLN
93
n
95
GLN
93
A
ASN
94
n
96
ASN
94
A
MET
95
n
97
MET
95
A
ASP
96
n
98
ASP
96
A
MET
97
n
99
MET
97
A
LEU
98
n
100
LEU
98
A
LEU
99
n
101
LEU
99
A
ASP
100
n
102
ASP
100
A
LEU
101
n
103
LEU
101
A
GLU
102
n
104
GLU
102
A
SER
103
n
105
SER
103
A
n
106
104
A
n
107
105
A
n
108
106
A
n
109
107
A
n
110
108
A
n
111
109
A
n
112
110
A
n
113
111
A
n
114
112
A
n
115
113
A
n
116
114
A
n
117
115
A
n
118
116
A
author_and_software_defined_assembly
PISA
2
dimeric
4940
-57
10930
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
CE
LYS
64
A
CE
LYS
66
1
Y
1
A
NZ
LYS
64
A
NZ
LYS
66
1
Y
1
A
CE
LYS
85
A
CE
LYS
87
1
Y
1
A
NZ
LYS
85
A
NZ
LYS
87
1
Y
1
A
MET
104
A
MET
106
1
Y
1
A
GLY
105
A
GLY
107
1
Y
1
A
GLY
106
A
GLY
108
1
Y
1
A
ARG
107
A
ARG
109
1
Y
1
A
ASN
108
A
ASN
110
1
Y
1
A
SER
109
A
SER
111
1
Y
1
A
PRO
110
A
PRO
112
1
Y
1
A
GLU
111
A
GLU
113
1
Y
1
A
LYS
112
A
LYS
114
1
Y
1
A
ALA
113
A
ALA
115
1
Y
1
A
ILE
114
A
ILE
116
1
Y
1
A
ARG
115
A
ARG
117
1
Y
1
A
SER
116
A
SER
118
1
Y
1
A
A
OE1
O
GLU
HOH
14
258
2.13
1
3.55
0.50
120.30
123.85
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
17
17
17
N
1
-3.04
0.50
120.30
117.26
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
17
17
17
N
49.780
20.2380
9.180
0.1731
0.1585
0.1592
1.250
29.208
1921
38338
5.01
99.92
1.000
0.160
0.1300
RANDOM
1
THROUGHOUT
1.910
MOLECULAR REPLACEMENT
14.7600
1.2000
1.3000
COMPUTATIONAL MODEL GENERATED FROM THE PROGRAM MODELLER
ML
FLAT BULK SOLVENT MODEL
1.250
29.208
111
948
0
0
837
0.012
1036
1.437
1408
0.083
155
0.007
185
13.102
410
0.2838
0.2369
1.2815
142
2536
2678
14
99.0
0.2154
0.1942
1.3162
153
2531
2684
14
100.0
0.1918
0.1663
1.3549
122
2566
2688
14
100.0
0.1846
0.1489
1.3986
133
2570
2703
14
100.0
0.1683
0.1428
1.4486
143
2538
2681
14
100.0
0.1733
0.1382
1.5066
124
2585
2709
14
100.0
0.1500
0.1188
1.5752
132
2577
2709
14
100.0
0.1425
0.1195
1.6582
153
2561
2714
14
100.0
0.1660
0.1302
1.7621
130
2602
2732
14
100.0
0.1709
0.1368
1.8981
148
2596
2744
14
100.0
0.1556
0.1448
2.0891
137
2590
2727
14
100.0
0.1725
0.1383
2.3912
152
2633
2785
14
100.0
0.1654
0.1722
3.0122
117
2693
2810
14
100.0
0.1829
0.1779
29.2159
135
2839
2974
14
100.0
1.250
46.762
4GQM
38420
0
-3
0.036
1
25.1
8.3
99.9
0.824
1.25
1.27
2.5
1
7.5
98.5
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
dev_1096
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
JDirector
data reduction
XDS
Crystal structure of a helix-turn-helix containing hypothetical protein (CT009) from Chlamydia trachomatis in a sub-domain swap conformation
1
N
N
2
N
N
A
GLY
-1
A
GLY
1
HELX_P
A
ARG
23
A
ARG
25
1
1
25
A
SER
26
A
SER
28
HELX_P
A
SER
35
A
SER
37
1
2
10
A
ARG
37
A
ARG
39
HELX_P
A
GLY
47
A
GLY
49
1
3
11
A
HIS
48
A
HIS
50
HELX_P
A
SER
54
A
SER
56
1
4
7
A
VAL
56
A
VAL
58
HELX_P
A
LEU
69
A
LEU
71
1
5
14
A
ASP
72
A
ASP
74
HELX_P
A
GLU
79
A
GLU
81
1
6
8
A
HIS
80
A
HIS
82
HELX_P
A
SER
103
A
SER
105
1
7
24
UNKNOWN FUNCTION
helix-turn-helix, UNKNOWN FUNCTION
B0B9B6_CHLT2
UNP
1
1
B0B9B6
MSEHVHKELLHLGEVFRSQREERALSLKDVEAATSIRLSALEAIEAGHLGKLISPVYAQGFMKKYAAFLDMDGDRLLKEH
PYVLKIFQEFSDQNMDMLLDLESMGGRNSPEKAIRS
1
116
4GQM
1
116
B0B9B6
A
1
3
118
1
expression tag
GLY
-1
4GQM
A
B0B9B6
UNP
1
1
expression tag
HIS
0
4GQM
A
B0B9B6
UNP
2
92
P 41 21 2