0.010897
0.000000
0.001255
0.000000
0.015798
0.000000
0.000000
0.000000
0.017561
0.00000
0.00000
0.00000
Grudnik, P.
Golik, P.
Kolesinski, P.
Dubin, G.
Szczepaniak, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
96.57
90.00
91.770
63.300
57.320
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
N
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
sing
Y
335
N
doub
N
336
N
sing
Y
337
N
doub
N
338
N
sing
Y
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
NE
Biochim.Biophys.Acta
BBACAQ
0113
0006-3002
1830
2899
2906
10.1016/j.bbagen.2012.12.025
23295968
Insights into eukaryotic Rubisco assembly - Crystal structures of RbcX chaperones from Arabidopsis thaliana.
2013
10.2210/pdb4gr6/pdb
pdb_00004gr6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2012-05-21
RIGAKU RAXIS IV++
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU MICROMAX-007 HF
15039.025
AtRbcX2
UNP residues 79-203
C91A
2
man
polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
18.015
water
91
nat
water
Chaperonin-like RbcX protein, Putative uncharacterized protein At5g19855
no
no
MEDVAGNYDDTFGDVQKQIVNYFTYKAVRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITR
LHLYGKWIKKADHGKIYQEISDENLALMRERLMETVIWPSDDTNSR
MEDVAGNYDDTFGDVQKQIVNYFTYKAVRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITR
LHLYGKWIKKADHGKIYQEISDENLALMRERLMETVIWPSDDTNSR
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse-ear cress,thale-cress
sample
At5g19855
3702
Arabidopsis thaliana
562
Escherichia coli
1
2.75
55.26
VAPOR DIFFUSION, SITTING DROP
5.6
15% PEG 400, 100 mM sodium citrate , pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 292K
292
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-01-30
1
1
2013-03-06
1
2
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-08-24
REL
REL
EDO
1,2-ETHANEDIOL
HOH
water
2Z44
PDB
experimental model
EDO
1
2
EDO
EDO
201
B
HOH
1
3
HOH
HOH
201
A
HOH
2
3
HOH
HOH
202
A
HOH
5
3
HOH
HOH
203
A
HOH
6
3
HOH
HOH
204
A
HOH
7
3
HOH
HOH
205
A
HOH
10
3
HOH
HOH
206
A
HOH
11
3
HOH
HOH
207
A
HOH
13
3
HOH
HOH
208
A
HOH
14
3
HOH
HOH
209
A
HOH
19
3
HOH
HOH
210
A
HOH
21
3
HOH
HOH
211
A
HOH
28
3
HOH
HOH
212
A
HOH
31
3
HOH
HOH
213
A
HOH
33
3
HOH
HOH
214
A
HOH
35
3
HOH
HOH
215
A
HOH
36
3
HOH
HOH
216
A
HOH
38
3
HOH
HOH
217
A
HOH
39
3
HOH
HOH
218
A
HOH
40
3
HOH
HOH
219
A
HOH
41
3
HOH
HOH
220
A
HOH
43
3
HOH
HOH
221
A
HOH
44
3
HOH
HOH
222
A
HOH
45
3
HOH
HOH
223
A
HOH
47
3
HOH
HOH
224
A
HOH
52
3
HOH
HOH
225
A
HOH
55
3
HOH
HOH
226
A
HOH
56
3
HOH
HOH
227
A
HOH
57
3
HOH
HOH
228
A
HOH
60
3
HOH
HOH
229
A
HOH
63
3
HOH
HOH
230
A
HOH
66
3
HOH
HOH
231
A
HOH
69
3
HOH
HOH
232
A
HOH
73
3
HOH
HOH
233
A
HOH
74
3
HOH
HOH
234
A
HOH
75
3
HOH
HOH
235
A
HOH
76
3
HOH
HOH
236
A
HOH
77
3
HOH
HOH
237
A
HOH
79
3
HOH
HOH
238
A
HOH
81
3
HOH
HOH
239
A
HOH
83
3
HOH
HOH
240
A
HOH
84
3
HOH
HOH
241
A
HOH
87
3
HOH
HOH
242
A
HOH
88
3
HOH
HOH
243
A
HOH
90
3
HOH
HOH
244
A
HOH
93
3
HOH
HOH
245
A
HOH
95
3
HOH
HOH
246
A
HOH
101
3
HOH
HOH
247
A
HOH
3
3
HOH
HOH
301
B
HOH
4
3
HOH
HOH
302
B
HOH
8
3
HOH
HOH
303
B
HOH
9
3
HOH
HOH
304
B
HOH
12
3
HOH
HOH
305
B
HOH
15
3
HOH
HOH
306
B
HOH
16
3
HOH
HOH
307
B
HOH
17
3
HOH
HOH
308
B
HOH
18
3
HOH
HOH
309
B
HOH
20
3
HOH
HOH
310
B
HOH
22
3
HOH
HOH
311
B
HOH
23
3
HOH
HOH
312
B
HOH
24
3
HOH
HOH
313
B
HOH
25
3
HOH
HOH
314
B
HOH
27
3
HOH
HOH
315
B
HOH
29
3
HOH
HOH
316
B
HOH
30
3
HOH
HOH
317
B
HOH
32
3
HOH
HOH
318
B
HOH
34
3
HOH
HOH
319
B
HOH
37
3
HOH
HOH
320
B
HOH
42
3
HOH
HOH
321
B
HOH
46
3
HOH
HOH
322
B
HOH
48
3
HOH
HOH
323
B
HOH
49
3
HOH
HOH
324
B
HOH
50
3
HOH
HOH
325
B
HOH
51
3
HOH
HOH
326
B
HOH
53
3
HOH
HOH
327
B
HOH
58
3
HOH
HOH
328
B
HOH
59
3
HOH
HOH
329
B
HOH
61
3
HOH
HOH
330
B
HOH
62
3
HOH
HOH
331
B
HOH
64
3
HOH
HOH
332
B
HOH
65
3
HOH
HOH
333
B
HOH
67
3
HOH
HOH
334
B
HOH
68
3
HOH
HOH
335
B
HOH
70
3
HOH
HOH
336
B
HOH
71
3
HOH
HOH
337
B
HOH
72
3
HOH
HOH
338
B
HOH
78
3
HOH
HOH
339
B
HOH
80
3
HOH
HOH
340
B
HOH
85
3
HOH
HOH
341
B
HOH
89
3
HOH
HOH
342
B
HOH
100
3
HOH
HOH
343
B
HOH
102
3
HOH
HOH
344
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
THR
11
n
11
THR
11
A
PHE
12
n
12
PHE
12
A
GLY
13
n
13
GLY
13
A
ASP
14
n
14
ASP
14
A
VAL
15
n
15
VAL
15
A
GLN
16
n
16
GLN
16
A
LYS
17
n
17
LYS
17
A
GLN
18
n
18
GLN
18
A
ILE
19
n
19
ILE
19
A
VAL
20
n
20
VAL
20
A
ASN
21
n
21
ASN
21
A
TYR
22
n
22
TYR
22
A
PHE
23
n
23
PHE
23
A
THR
24
n
24
THR
24
A
TYR
25
n
25
TYR
25
A
LYS
26
n
26
LYS
26
A
ALA
27
n
27
ALA
27
A
VAL
28
n
28
VAL
28
A
ARG
29
n
29
ARG
29
A
THR
30
n
30
THR
30
A
VAL
31
n
31
VAL
31
A
LEU
32
n
32
LEU
32
A
HIS
33
n
33
HIS
33
A
GLN
34
n
34
GLN
34
A
LEU
35
n
35
LEU
35
A
TYR
36
n
36
TYR
36
A
GLU
37
n
37
GLU
37
A
MET
38
n
38
MET
38
A
ASN
39
n
39
ASN
39
A
PRO
40
n
40
PRO
40
A
PRO
41
n
41
PRO
41
A
GLN
42
n
42
GLN
42
A
TYR
43
n
43
TYR
43
A
THR
44
n
44
THR
44
A
TRP
45
n
45
TRP
45
A
PHE
46
n
46
PHE
46
A
TYR
47
n
47
TYR
47
A
ASN
48
n
48
ASN
48
A
HIS
49
n
49
HIS
49
A
ILE
50
n
50
ILE
50
A
ILE
51
n
51
ILE
51
A
THR
52
n
52
THR
52
A
ASN
53
n
53
ASN
53
A
ARG
54
n
54
ARG
54
A
PRO
55
n
55
PRO
55
A
THR
56
n
56
THR
56
A
ASP
57
n
57
ASP
57
A
GLY
58
n
58
GLY
58
A
LYS
59
n
59
LYS
59
A
ARG
60
n
60
ARG
60
A
PHE
61
n
61
PHE
61
A
LEU
62
n
62
LEU
62
A
ARG
63
n
63
ARG
63
A
ALA
64
n
64
ALA
64
A
LEU
65
n
65
LEU
65
A
GLY
66
n
66
GLY
66
A
LYS
67
n
67
LYS
67
A
GLU
68
n
68
GLU
68
A
SER
69
n
69
SER
69
A
GLN
70
n
70
GLN
70
A
GLU
71
n
71
GLU
71
A
LEU
72
n
72
LEU
72
A
ALA
73
n
73
ALA
73
A
GLU
74
n
74
GLU
74
A
ARG
75
n
75
ARG
75
A
VAL
76
n
76
VAL
76
A
MET
77
n
77
MET
77
A
ILE
78
n
78
ILE
78
A
THR
79
n
79
THR
79
A
ARG
80
n
80
ARG
80
A
LEU
81
n
81
LEU
81
A
HIS
82
n
82
HIS
82
A
LEU
83
n
83
LEU
83
A
TYR
84
n
84
TYR
84
A
GLY
85
n
85
GLY
85
A
LYS
86
n
86
LYS
86
A
TRP
87
n
87
TRP
87
A
ILE
88
n
88
ILE
88
A
LYS
89
n
89
LYS
89
A
LYS
90
n
90
LYS
90
A
ALA
91
n
91
ALA
91
A
ASP
92
n
92
ASP
92
A
HIS
93
n
93
HIS
93
A
GLY
94
n
94
GLY
94
A
LYS
95
n
95
LYS
95
A
ILE
96
n
96
ILE
96
A
TYR
97
n
97
TYR
97
A
GLN
98
n
98
GLN
98
A
GLU
99
n
99
GLU
99
A
ILE
100
n
100
ILE
100
A
SER
101
n
101
SER
101
A
ASP
102
n
102
ASP
102
A
GLU
103
n
103
GLU
103
A
ASN
104
n
104
ASN
104
A
LEU
105
n
105
LEU
105
A
ALA
106
n
106
ALA
106
A
LEU
107
n
107
LEU
107
A
MET
108
n
108
MET
108
A
ARG
109
n
109
ARG
109
A
GLU
110
n
110
GLU
110
A
ARG
111
n
111
ARG
111
A
LEU
112
n
112
LEU
112
A
MET
113
n
113
MET
113
A
GLU
114
n
114
GLU
114
A
n
115
115
A
n
116
116
A
n
117
117
A
n
118
118
A
n
119
119
A
n
120
120
A
n
121
121
A
n
122
122
A
n
123
123
A
n
124
124
A
n
125
125
A
n
126
126
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
n
10
10
B
THR
11
n
11
THR
11
B
PHE
12
n
12
PHE
12
B
GLY
13
n
13
GLY
13
B
ASP
14
n
14
ASP
14
B
VAL
15
n
15
VAL
15
B
GLN
16
n
16
GLN
16
B
LYS
17
n
17
LYS
17
B
GLN
18
n
18
GLN
18
B
ILE
19
n
19
ILE
19
B
VAL
20
n
20
VAL
20
B
ASN
21
n
21
ASN
21
B
TYR
22
n
22
TYR
22
B
PHE
23
n
23
PHE
23
B
THR
24
n
24
THR
24
B
TYR
25
n
25
TYR
25
B
LYS
26
n
26
LYS
26
B
ALA
27
n
27
ALA
27
B
VAL
28
n
28
VAL
28
B
ARG
29
n
29
ARG
29
B
THR
30
n
30
THR
30
B
VAL
31
n
31
VAL
31
B
LEU
32
n
32
LEU
32
B
HIS
33
n
33
HIS
33
B
GLN
34
n
34
GLN
34
B
LEU
35
n
35
LEU
35
B
TYR
36
n
36
TYR
36
B
GLU
37
n
37
GLU
37
B
MET
38
n
38
MET
38
B
ASN
39
n
39
ASN
39
B
PRO
40
n
40
PRO
40
B
PRO
41
n
41
PRO
41
B
GLN
42
n
42
GLN
42
B
TYR
43
n
43
TYR
43
B
THR
44
n
44
THR
44
B
TRP
45
n
45
TRP
45
B
PHE
46
n
46
PHE
46
B
TYR
47
n
47
TYR
47
B
ASN
48
n
48
ASN
48
B
HIS
49
n
49
HIS
49
B
ILE
50
n
50
ILE
50
B
ILE
51
n
51
ILE
51
B
THR
52
n
52
THR
52
B
ASN
53
n
53
ASN
53
B
ARG
54
n
54
ARG
54
B
PRO
55
n
55
PRO
55
B
THR
56
n
56
THR
56
B
ASP
57
n
57
ASP
57
B
GLY
58
n
58
GLY
58
B
LYS
59
n
59
LYS
59
B
ARG
60
n
60
ARG
60
B
PHE
61
n
61
PHE
61
B
LEU
62
n
62
LEU
62
B
ARG
63
n
63
ARG
63
B
ALA
64
n
64
ALA
64
B
LEU
65
n
65
LEU
65
B
GLY
66
n
66
GLY
66
B
LYS
67
n
67
LYS
67
B
GLU
68
n
68
GLU
68
B
SER
69
n
69
SER
69
B
GLN
70
n
70
GLN
70
B
GLU
71
n
71
GLU
71
B
LEU
72
n
72
LEU
72
B
ALA
73
n
73
ALA
73
B
GLU
74
n
74
GLU
74
B
ARG
75
n
75
ARG
75
B
VAL
76
n
76
VAL
76
B
MET
77
n
77
MET
77
B
ILE
78
n
78
ILE
78
B
THR
79
n
79
THR
79
B
ARG
80
n
80
ARG
80
B
LEU
81
n
81
LEU
81
B
HIS
82
n
82
HIS
82
B
LEU
83
n
83
LEU
83
B
TYR
84
n
84
TYR
84
B
GLY
85
n
85
GLY
85
B
LYS
86
n
86
LYS
86
B
TRP
87
n
87
TRP
87
B
ILE
88
n
88
ILE
88
B
LYS
89
n
89
LYS
89
B
LYS
90
n
90
LYS
90
B
ALA
91
n
91
ALA
91
B
ASP
92
n
92
ASP
92
B
HIS
93
n
93
HIS
93
B
GLY
94
n
94
GLY
94
B
LYS
95
n
95
LYS
95
B
ILE
96
n
96
ILE
96
B
TYR
97
n
97
TYR
97
B
GLN
98
n
98
GLN
98
B
GLU
99
n
99
GLU
99
B
ILE
100
n
100
ILE
100
B
SER
101
n
101
SER
101
B
ASP
102
n
102
ASP
102
B
GLU
103
n
103
GLU
103
B
ASN
104
n
104
ASN
104
B
LEU
105
n
105
LEU
105
B
ALA
106
n
106
ALA
106
B
LEU
107
n
107
LEU
107
B
MET
108
n
108
MET
108
B
ARG
109
n
109
ARG
109
B
GLU
110
n
110
GLU
110
B
ARG
111
n
111
ARG
111
B
LEU
112
n
112
LEU
112
B
MET
113
n
113
MET
113
B
GLU
114
n
114
GLU
114
B
THR
115
n
115
THR
115
B
n
116
116
B
n
117
117
B
n
118
118
B
n
119
119
B
n
120
120
B
n
121
121
B
n
122
122
B
n
123
123
B
n
124
124
B
n
125
125
B
n
126
126
B
1.8990
1.4364
0.0103
1.0191
0.0042
-0.0588
-0.0012
-0.0564
-0.1154
-0.0111
-0.0414
-0.0353
0.0737
-0.0628
0.0523
0.2837
-0.0224
0.0261
0.3016
-0.0064
0.2259
refined
-12.1395
19.2645
-14.6886
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
all
author_and_software_defined_assembly
PISA
2
dimeric
4300
-28
11830
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
HOH
332
E
HOH
1
A
CG
GLU
37
A
CG
GLU
37
1
Y
1
A
CD
GLU
37
A
CD
GLU
37
1
Y
1
A
OE1
GLU
37
A
OE1
GLU
37
1
Y
1
A
OE2
GLU
37
A
OE2
GLU
37
1
Y
1
A
CD
GLU
74
A
CD
GLU
74
1
Y
1
A
OE1
GLU
74
A
OE1
GLU
74
1
Y
1
A
OE2
GLU
74
A
OE2
GLU
74
1
Y
1
A
CE
LYS
89
A
CE
LYS
89
1
Y
1
A
NZ
LYS
89
A
NZ
LYS
89
1
Y
1
A
CG
LYS
95
A
CG
LYS
95
1
Y
1
A
CD
LYS
95
A
CD
LYS
95
1
Y
1
A
CE
LYS
95
A
CE
LYS
95
1
Y
1
A
NZ
LYS
95
A
NZ
LYS
95
1
Y
1
A
CD
ARG
109
A
CD
ARG
109
1
Y
1
A
NE
ARG
109
A
NE
ARG
109
1
Y
1
A
CZ
ARG
109
A
CZ
ARG
109
1
Y
1
A
NH1
ARG
109
A
NH1
ARG
109
1
Y
1
A
NH2
ARG
109
A
NH2
ARG
109
1
Y
1
A
CD
ARG
111
A
CD
ARG
111
1
Y
1
A
NE
ARG
111
A
NE
ARG
111
1
Y
1
A
CZ
ARG
111
A
CZ
ARG
111
1
Y
1
A
NH1
ARG
111
A
NH1
ARG
111
1
Y
1
A
NH2
ARG
111
A
NH2
ARG
111
1
Y
1
A
CD1
LEU
112
A
CD1
LEU
112
1
Y
1
A
CD2
LEU
112
A
CD2
LEU
112
1
Y
1
A
CG
MET
113
A
CG
MET
113
1
Y
1
A
SD
MET
113
A
SD
MET
113
1
Y
1
A
CE
MET
113
A
CE
MET
113
1
Y
1
A
C
GLU
114
A
C
GLU
114
1
Y
1
A
O
GLU
114
A
O
GLU
114
1
Y
1
A
CB
GLU
114
A
CB
GLU
114
1
Y
1
A
CG
GLU
114
A
CG
GLU
114
1
Y
1
A
CD
GLU
114
A
CD
GLU
114
1
Y
1
A
OE1
GLU
114
A
OE1
GLU
114
1
Y
1
A
OE2
GLU
114
A
OE2
GLU
114
1
Y
1
B
CG2
THR
11
B
CG2
THR
11
1
Y
1
B
CG
LYS
17
B
CG
LYS
17
1
Y
1
B
CD
LYS
17
B
CD
LYS
17
1
Y
1
B
CE
LYS
17
B
CE
LYS
17
1
Y
1
B
NZ
LYS
17
B
NZ
LYS
17
1
Y
1
B
CD
GLN
18
B
CD
GLN
18
1
Y
1
B
OE1
GLN
18
B
OE1
GLN
18
1
Y
1
B
NE2
GLN
18
B
NE2
GLN
18
1
Y
1
B
CG
LYS
26
B
CG
LYS
26
1
Y
1
B
CD
LYS
26
B
CD
LYS
26
1
Y
1
B
CE
LYS
26
B
CE
LYS
26
1
Y
1
B
NZ
LYS
26
B
NZ
LYS
26
1
Y
1
B
NE
ARG
29
B
NE
ARG
29
1
Y
1
B
CZ
ARG
29
B
CZ
ARG
29
1
Y
1
B
NH1
ARG
29
B
NH1
ARG
29
1
Y
1
B
NH2
ARG
29
B
NH2
ARG
29
1
Y
1
B
CD
GLU
37
B
CD
GLU
37
1
Y
1
B
OE1
GLU
37
B
OE1
GLU
37
1
Y
1
B
OE2
GLU
37
B
OE2
GLU
37
1
Y
1
B
OG1
THR
56
B
OG1
THR
56
1
Y
1
B
CG2
THR
56
B
CG2
THR
56
1
Y
1
B
CD
ARG
60
B
CD
ARG
60
1
Y
1
B
NE
ARG
60
B
NE
ARG
60
1
Y
1
B
CZ
ARG
60
B
CZ
ARG
60
1
Y
1
B
NH1
ARG
60
B
NH1
ARG
60
1
Y
1
B
NH2
ARG
60
B
NH2
ARG
60
1
Y
1
B
CD
GLU
74
B
CD
GLU
74
1
Y
1
B
OE1
GLU
74
B
OE1
GLU
74
1
Y
1
B
OE2
GLU
74
B
OE2
GLU
74
1
Y
1
B
CD
LYS
89
B
CD
LYS
89
1
Y
1
B
CE
LYS
89
B
CE
LYS
89
1
Y
1
B
NZ
LYS
89
B
NZ
LYS
89
1
Y
1
B
CD
LYS
95
B
CD
LYS
95
1
Y
1
B
CE
LYS
95
B
CE
LYS
95
1
Y
1
B
NZ
LYS
95
B
NZ
LYS
95
1
Y
1
B
CD
GLU
114
B
CD
GLU
114
1
Y
1
B
OE1
GLU
114
B
OE1
GLU
114
1
Y
1
B
OE2
GLU
114
B
OE2
GLU
114
1
Y
1
B
OG1
THR
115
B
OG1
THR
115
1
Y
1
B
CG2
THR
115
B
CG2
THR
115
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
GLU
2
A
GLU
2
1
Y
1
A
ASP
3
A
ASP
3
1
Y
1
A
VAL
4
A
VAL
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
GLY
6
A
GLY
6
1
Y
1
A
ASN
7
A
ASN
7
1
Y
1
A
TYR
8
A
TYR
8
1
Y
1
A
ASP
9
A
ASP
9
1
Y
1
A
ASP
10
A
ASP
10
1
Y
1
A
THR
115
A
THR
115
1
Y
1
A
VAL
116
A
VAL
116
1
Y
1
A
ILE
117
A
ILE
117
1
Y
1
A
TRP
118
A
TRP
118
1
Y
1
A
PRO
119
A
PRO
119
1
Y
1
A
SER
120
A
SER
120
1
Y
1
A
ASP
121
A
ASP
121
1
Y
1
A
ASP
122
A
ASP
122
1
Y
1
A
THR
123
A
THR
123
1
Y
1
A
ASN
124
A
ASN
124
1
Y
1
A
SER
125
A
SER
125
1
Y
1
A
ARG
126
A
ARG
126
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
GLU
2
B
GLU
2
1
Y
1
B
ASP
3
B
ASP
3
1
Y
1
B
VAL
4
B
VAL
4
1
Y
1
B
ALA
5
B
ALA
5
1
Y
1
B
GLY
6
B
GLY
6
1
Y
1
B
ASN
7
B
ASN
7
1
Y
1
B
TYR
8
B
TYR
8
1
Y
1
B
ASP
9
B
ASP
9
1
Y
1
B
ASP
10
B
ASP
10
1
Y
1
B
VAL
116
B
VAL
116
1
Y
1
B
ILE
117
B
ILE
117
1
Y
1
B
TRP
118
B
TRP
118
1
Y
1
B
PRO
119
B
PRO
119
1
Y
1
B
SER
120
B
SER
120
1
Y
1
B
ASP
121
B
ASP
121
1
Y
1
B
ASP
122
B
ASP
122
1
Y
1
B
THR
123
B
THR
123
1
Y
1
B
ASN
124
B
ASN
124
1
Y
1
B
SER
125
B
SER
125
1
Y
1
B
ARG
126
B
ARG
126
1
Y
1
A
A
NZ
OD1
LYS
ASP
17
57
2.12
1
A
A
O
O
HOH
HOH
228
235
2.16
1
B
B
O
O
HOH
HOH
340
341
2.18
1
A
A
O
O
HOH
HOH
227
234
1.90
1_555
2_555
1
A
ASN
39
-157.70
70.06
1
A
THR
56
-107.44
-64.70
1
B
ASN
39
-153.63
71.20
1
B
PRO
55
-64.04
46.29
1
B
THR
56
-78.28
-83.69
0.1964
0.1737
0.1750
0.1750
2.000
21.167
1112
21785
5.10
98.40
0.16
RANDOM
1
1.35
MOLECULAR REPLACEMENT
21.03
0.90
1.11
2Z44
ML
FLAT BULK SOLVENT MODEL
2.000
21.167
91
1795
4
0
1700
0.012
1780
1.206
2413
14.301
653
0.077
258
0.006
308
0.2251
0.1964
2.0910
124
2523
97.00
0.1958
0.1787
2.2011
116
2581
97.00
0.1932
0.1669
2.3389
128
2535
98.00
0.2149
0.1622
2.5192
161
2565
98.00
0.1960
0.1615
2.7722
141
2595
99.00
0.1892
0.1755
3.1722
144
2596
99.00
0.1775
0.1693
3.9923
144
2618
100.00
0.2050
0.1810
21.1685
154
2660
99.00
2.0
33.75
4GR6
21808
21808
1
100
data collection
CrystalClear
model building
PHENIX
refinement
PHENIX
(phenix.refine: 1.8_1062)
data reduction
MOSFLM
data scaling
SCALA
phasing
PHENIX
Crystal structure of AtRbcX2 from Arabidopsis thaliana
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
A
PHE
12
A
PHE
12
HELX_P
A
ASN
39
A
ASN
39
1
1
28
A
ASN
39
A
ASN
39
HELX_P
A
ASN
53
A
ASN
53
1
2
15
A
ASP
57
A
ASP
57
HELX_P
A
SER
69
A
SER
69
1
3
13
A
SER
69
A
SER
69
HELX_P
A
ALA
91
A
ALA
91
1
4
23
A
ASP
92
A
ASP
92
HELX_P
A
MET
113
A
MET
113
1
5
22
B
PHE
12
B
PHE
12
HELX_P
B
ASN
39
B
ASN
39
1
6
28
B
ASN
39
B
ASN
39
HELX_P
B
ASN
53
B
ASN
53
1
7
15
B
ASP
57
B
ASP
57
HELX_P
B
SER
69
B
SER
69
1
8
13
B
SER
69
B
SER
69
HELX_P
B
ALA
91
B
ALA
91
1
9
23
B
ASP
92
B
ASP
92
HELX_P
B
GLU
114
B
GLU
114
1
10
23
CHAPERONE
chaperone, Rubisco, RbcX
Q8L9X2_ARATH
UNP
1
79
Q8L9X2
EDVAGNYDDTFGDVQKQIVNYFTYKAVRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRL
HLYGKWIKKCDHGKIYQEISDENLALMRERLMETVIWPSDDTNSR
79
203
4GR6
2
126
Q8L9X2
A
1
2
126
79
203
4GR6
2
126
Q8L9X2
B
1
2
126
1
initiating methionine
MET
1
4GR6
A
Q8L9X2
UNP
1
1
CYS
engineered mutation
ALA
91
4GR6
A
Q8L9X2
UNP
168
91
2
initiating methionine
MET
1
4GR6
B
Q8L9X2
UNP
1
2
CYS
engineered mutation
ALA
91
4GR6
B
Q8L9X2
UNP
168
91
BINDING SITE FOR RESIDUE EDO B 201
B
EDO
201
Software
3
B
GLY
94
B
GLY
94
3
1_555
B
LYS
95
B
LYS
95
3
1_555
B
HOH
321
E
HOH
3
1_555
5
C 1 2 1