0.010218
0.005899
0.000000
0.000000
0.011799
0.000000
0.000000
0.000000
0.005863
0.00000
0.00000
0.00000
Nishizawa, A.
Harada, A.
Senda, M.
Tachihara, Y.
Muramatsu, D.
Kishigami, S.
Mori, S.
Sugiyama, K.
Senda, T.
Kimura, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
97.868
97.868
170.568
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C27 H33 N9 O15 P2
785.550
FLAVIN-ADENINE DINUCLEOTIDE
non-polymer
C H2 O2
46.025
FORMIC ACID
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
R
P
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
C
N
93
R
C
N
94
N
O
N
95
S
C
N
96
N
O
N
97
R
C
N
98
N
O
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
N
N
111
N
C
N
112
N
O
N
113
N
N
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
N
Y
118
N
C
Y
119
N
C
Y
120
N
C
N
121
N
C
Y
122
N
C
N
123
N
C
Y
124
N
C
Y
125
N
C
N
126
N
N
N
127
N
C
N
128
N
C
N
129
S
C
N
130
N
O
N
131
S
C
N
132
N
O
N
133
R
C
N
134
N
O
N
135
N
C
N
136
N
O
N
137
R
P
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
C
N
175
N
O
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
O
N
187
N
N
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
O
N
207
N
O
N
208
N
O
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
Y
233
N
C
Y
234
N
N
Y
235
N
C
Y
236
N
C
Y
237
N
N
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
O
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
S
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
C
N
304
N
N
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
C
N
327
N
S
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
N
369
N
C
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
R
C
N
400
N
O
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
N
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
Y
132
N
doub
Y
133
N
sing
Y
134
N
sing
N
135
N
sing
N
136
N
sing
Y
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
Y
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
Y
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
sing
Y
236
N
doub
Y
237
N
doub
N
238
N
sing
Y
239
N
sing
N
240
N
sing
Y
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
Y
412
N
doub
Y
413
N
sing
Y
414
N
sing
N
415
N
sing
Y
416
N
doub
Y
417
N
sing
Y
418
N
sing
N
419
N
sing
Y
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
doub
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
Y
440
N
doub
Y
441
N
sing
Y
442
N
sing
N
443
N
sing
Y
444
N
doub
N
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
To be Published
0353
Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4
10.2210/pdb4h4q/pdb
pdb_00004h4q
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
95
1
CCD
2007-10-13
ADSC QUANTUM 270
Si 111
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BL-17A
Photon Factory
1.0000
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-17A
43221.250
Biphenyl dioxygenase ferredoxin reductase subunit
1.18.1.3
E175Q, Q177K
1
man
polymer
46.025
FORMIC ACID
5
syn
non-polymer
785.550
FLAVIN-ADENINE DINUCLEOTIDE
1
syn
non-polymer
18.015
water
101
nat
water
no
no
MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGV
TAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLEL
AATARTAGVHVSLVQTKPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLAN
DALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYW
SDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLR
KLAAAVAA
MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGV
TAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLEL
AATARTAGVHVSLVQTKPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLAN
DALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYW
SDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLR
KLAAAVAA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
KKS102
sample
bphA4
358220
Acidovorax
562
Escherichia coli
1
2.73
54.91
VAPOR DIFFUSION, SITTING DROP
5.2
2.5M Sodium formate, 0.1M acetate buffer, pH 5.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-10-09
1
1
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2012-09-18
REL
REL
FMT
FORMIC ACID
FAD
FLAVIN-ADENINE DINUCLEOTIDE
HOH
water
2YVF
PDB
experimental model
FMT
1
2
FMT
FMT
501
A
FMT
2
2
FMT
FMT
502
A
FMT
3
2
FMT
FMT
503
A
FMT
4
2
FMT
FMT
504
A
FMT
5
2
FMT
FMT
505
A
FAD
449
3
FAD
FAD
506
A
HOH
1
4
HOH
HOH
601
A
HOH
2
4
HOH
HOH
602
A
HOH
3
4
HOH
HOH
603
A
HOH
4
4
HOH
HOH
604
A
HOH
5
4
HOH
HOH
605
A
HOH
6
4
HOH
HOH
606
A
HOH
7
4
HOH
HOH
607
A
HOH
8
4
HOH
HOH
608
A
HOH
9
4
HOH
HOH
609
A
HOH
10
4
HOH
HOH
610
A
HOH
11
4
HOH
HOH
611
A
HOH
12
4
HOH
HOH
612
A
HOH
13
4
HOH
HOH
613
A
HOH
14
4
HOH
HOH
614
A
HOH
15
4
HOH
HOH
615
A
HOH
16
4
HOH
HOH
616
A
HOH
17
4
HOH
HOH
617
A
HOH
18
4
HOH
HOH
618
A
HOH
19
4
HOH
HOH
619
A
HOH
20
4
HOH
HOH
620
A
HOH
21
4
HOH
HOH
621
A
HOH
22
4
HOH
HOH
622
A
HOH
23
4
HOH
HOH
623
A
HOH
24
4
HOH
HOH
624
A
HOH
25
4
HOH
HOH
625
A
HOH
26
4
HOH
HOH
626
A
HOH
27
4
HOH
HOH
627
A
HOH
28
4
HOH
HOH
628
A
HOH
29
4
HOH
HOH
629
A
HOH
30
4
HOH
HOH
630
A
HOH
31
4
HOH
HOH
631
A
HOH
32
4
HOH
HOH
632
A
HOH
33
4
HOH
HOH
633
A
HOH
34
4
HOH
HOH
634
A
HOH
35
4
HOH
HOH
635
A
HOH
36
4
HOH
HOH
636
A
HOH
37
4
HOH
HOH
637
A
HOH
38
4
HOH
HOH
638
A
HOH
39
4
HOH
HOH
639
A
HOH
40
4
HOH
HOH
640
A
HOH
41
4
HOH
HOH
641
A
HOH
42
4
HOH
HOH
642
A
HOH
43
4
HOH
HOH
643
A
HOH
44
4
HOH
HOH
644
A
HOH
45
4
HOH
HOH
645
A
HOH
46
4
HOH
HOH
646
A
HOH
47
4
HOH
HOH
647
A
HOH
48
4
HOH
HOH
648
A
HOH
49
4
HOH
HOH
649
A
HOH
50
4
HOH
HOH
650
A
HOH
51
4
HOH
HOH
651
A
HOH
52
4
HOH
HOH
652
A
HOH
53
4
HOH
HOH
653
A
HOH
54
4
HOH
HOH
654
A
HOH
55
4
HOH
HOH
655
A
HOH
56
4
HOH
HOH
656
A
HOH
57
4
HOH
HOH
657
A
HOH
58
4
HOH
HOH
658
A
HOH
59
4
HOH
HOH
659
A
HOH
60
4
HOH
HOH
660
A
HOH
61
4
HOH
HOH
661
A
HOH
62
4
HOH
HOH
662
A
HOH
63
4
HOH
HOH
663
A
HOH
64
4
HOH
HOH
664
A
HOH
65
4
HOH
HOH
665
A
HOH
66
4
HOH
HOH
666
A
HOH
67
4
HOH
HOH
667
A
HOH
68
4
HOH
HOH
668
A
HOH
69
4
HOH
HOH
669
A
HOH
70
4
HOH
HOH
670
A
HOH
71
4
HOH
HOH
671
A
HOH
72
4
HOH
HOH
672
A
HOH
73
4
HOH
HOH
673
A
HOH
74
4
HOH
HOH
674
A
HOH
75
4
HOH
HOH
675
A
HOH
76
4
HOH
HOH
676
A
HOH
77
4
HOH
HOH
677
A
HOH
78
4
HOH
HOH
678
A
HOH
79
4
HOH
HOH
679
A
HOH
80
4
HOH
HOH
680
A
HOH
81
4
HOH
HOH
681
A
HOH
82
4
HOH
HOH
682
A
HOH
83
4
HOH
HOH
683
A
HOH
84
4
HOH
HOH
684
A
HOH
85
4
HOH
HOH
685
A
HOH
86
4
HOH
HOH
686
A
HOH
87
4
HOH
HOH
687
A
HOH
88
4
HOH
HOH
688
A
HOH
89
4
HOH
HOH
689
A
HOH
90
4
HOH
HOH
690
A
HOH
91
4
HOH
HOH
691
A
HOH
92
4
HOH
HOH
692
A
HOH
93
4
HOH
HOH
693
A
HOH
94
4
HOH
HOH
694
A
HOH
95
4
HOH
HOH
695
A
HOH
96
4
HOH
HOH
696
A
HOH
97
4
HOH
HOH
697
A
HOH
98
4
HOH
HOH
698
A
HOH
99
4
HOH
HOH
699
A
HOH
100
4
HOH
HOH
700
A
HOH
101
4
HOH
HOH
701
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
LEU
6
n
6
LEU
6
A
LYS
7
n
7
LYS
7
A
ALA
8
n
8
ALA
8
A
PRO
9
n
9
PRO
9
A
VAL
10
n
10
VAL
10
A
VAL
11
n
11
VAL
11
A
VAL
12
n
12
VAL
12
A
LEU
13
n
13
LEU
13
A
GLY
14
n
14
GLY
14
A
ALA
15
n
15
ALA
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ALA
18
n
18
ALA
18
A
SER
19
n
19
SER
19
A
VAL
20
n
20
VAL
20
A
SER
21
n
21
SER
21
A
PHE
22
n
22
PHE
22
A
VAL
23
n
23
VAL
23
A
ALA
24
n
24
ALA
24
A
GLU
25
n
25
GLU
25
A
LEU
26
n
26
LEU
26
A
ARG
27
n
27
ARG
27
A
GLN
28
n
28
GLN
28
A
ALA
29
n
29
ALA
29
A
GLY
30
n
30
GLY
30
A
TYR
31
n
31
TYR
31
A
GLN
32
n
32
GLN
32
A
GLY
33
n
33
GLY
33
A
LEU
34
n
34
LEU
34
A
ILE
35
n
35
ILE
35
A
THR
36
n
36
THR
36
A
VAL
37
n
37
VAL
37
A
VAL
38
n
38
VAL
38
A
GLY
39
n
39
GLY
39
A
ASP
40
n
40
ASP
40
A
GLU
41
n
41
GLU
41
A
ALA
42
n
42
ALA
42
A
GLU
43
n
43
GLU
43
A
ARG
44
n
44
ARG
44
A
PRO
45
n
45
PRO
45
A
TYR
46
n
46
TYR
46
A
ASP
47
n
47
ASP
47
A
ARG
48
n
48
ARG
48
A
PRO
49
n
49
PRO
49
A
PRO
50
n
50
PRO
50
A
LEU
51
n
51
LEU
51
A
SER
52
n
52
SER
52
A
LYS
53
n
53
LYS
53
A
ASP
54
n
54
ASP
54
A
PHE
55
n
55
PHE
55
A
MET
56
n
56
MET
56
A
ALA
57
n
57
ALA
57
A
HIS
58
n
58
HIS
58
A
GLY
59
n
59
GLY
59
A
ASP
60
n
60
ASP
60
A
ALA
61
n
61
ALA
61
A
GLU
62
n
62
GLU
62
A
LYS
63
n
63
LYS
63
A
ILE
64
n
64
ILE
64
A
ARG
65
n
65
ARG
65
A
LEU
66
n
66
LEU
66
A
ASP
67
n
67
ASP
67
A
CYS
68
n
68
CYS
68
A
LYS
69
n
69
LYS
69
A
ARG
70
n
70
ARG
70
A
ALA
71
n
71
ALA
71
A
PRO
72
n
72
PRO
72
A
GLU
73
n
73
GLU
73
A
VAL
74
n
74
VAL
74
A
GLU
75
n
75
GLU
75
A
TRP
76
n
76
TRP
76
A
LEU
77
n
77
LEU
77
A
LEU
78
n
78
LEU
78
A
GLY
79
n
79
GLY
79
A
VAL
80
n
80
VAL
80
A
THR
81
n
81
THR
81
A
ALA
82
n
82
ALA
82
A
GLN
83
n
83
GLN
83
A
SER
84
n
84
SER
84
A
PHE
85
n
85
PHE
85
A
ASP
86
n
86
ASP
86
A
PRO
87
n
87
PRO
87
A
GLN
88
n
88
GLN
88
A
ALA
89
n
89
ALA
89
A
HIS
90
n
90
HIS
90
A
THR
91
n
91
THR
91
A
VAL
92
n
92
VAL
92
A
ALA
93
n
93
ALA
93
A
LEU
94
n
94
LEU
94
A
SER
95
n
95
SER
95
A
ASP
96
n
96
ASP
96
A
GLY
97
n
97
GLY
97
A
ARG
98
n
98
ARG
98
A
THR
99
n
99
THR
99
A
LEU
100
n
100
LEU
100
A
PRO
101
n
101
PRO
101
A
TYR
102
n
102
TYR
102
A
GLY
103
n
103
GLY
103
A
THR
104
n
104
THR
104
A
LEU
105
n
105
LEU
105
A
VAL
106
n
106
VAL
106
A
LEU
107
n
107
LEU
107
A
ALA
108
n
108
ALA
108
A
THR
109
n
109
THR
109
A
GLY
110
n
110
GLY
110
A
ALA
111
n
111
ALA
111
A
ALA
112
n
112
ALA
112
A
PRO
113
n
113
PRO
113
A
ARG
114
n
114
ARG
114
A
ALA
115
n
115
ALA
115
A
LEU
116
n
116
LEU
116
A
PRO
117
n
117
PRO
117
A
THR
118
n
118
THR
118
A
LEU
119
n
119
LEU
119
A
GLN
120
n
120
GLN
120
A
GLY
121
n
121
GLY
121
A
ALA
122
n
122
ALA
122
A
THR
123
n
123
THR
123
A
MET
124
n
124
MET
124
A
PRO
125
n
125
PRO
125
A
VAL
126
n
126
VAL
126
A
HIS
127
n
127
HIS
127
A
THR
128
n
128
THR
128
A
LEU
129
n
129
LEU
129
A
ARG
130
n
130
ARG
130
A
THR
131
n
131
THR
131
A
LEU
132
n
132
LEU
132
A
GLU
133
n
133
GLU
133
A
ASP
134
n
134
ASP
134
A
ALA
135
n
135
ALA
135
A
ARG
136
n
136
ARG
136
A
ARG
137
n
137
ARG
137
A
ILE
138
n
138
ILE
138
A
GLN
139
n
139
GLN
139
A
ALA
140
n
140
ALA
140
A
GLY
141
n
141
GLY
141
A
LEU
142
n
142
LEU
142
A
ARG
143
n
143
ARG
143
A
PRO
144
n
144
PRO
144
A
GLN
145
n
145
GLN
145
A
SER
146
n
146
SER
146
A
ARG
147
n
147
ARG
147
A
LEU
148
n
148
LEU
148
A
LEU
149
n
149
LEU
149
A
ILE
150
n
150
ILE
150
A
VAL
151
n
151
VAL
151
A
GLY
152
n
152
GLY
152
A
GLY
153
n
153
GLY
153
A
GLY
154
n
154
GLY
154
A
VAL
155
n
155
VAL
155
A
ILE
156
n
156
ILE
156
A
GLY
157
n
157
GLY
157
A
LEU
158
n
158
LEU
158
A
GLU
159
n
159
GLU
159
A
LEU
160
n
160
LEU
160
A
ALA
161
n
161
ALA
161
A
ALA
162
n
162
ALA
162
A
THR
163
n
163
THR
163
A
ALA
164
n
164
ALA
164
A
ARG
165
n
165
ARG
165
A
THR
166
n
166
THR
166
A
ALA
167
n
167
ALA
167
A
GLY
168
n
168
GLY
168
A
VAL
169
n
169
VAL
169
A
HIS
170
n
170
HIS
170
A
VAL
171
n
171
VAL
171
A
SER
172
n
172
SER
172
A
LEU
173
n
173
LEU
173
A
VAL
174
n
174
VAL
174
A
GLN
175
n
175
GLN
175
A
THR
176
n
176
THR
176
A
LYS
177
n
177
LYS
177
A
PRO
178
n
178
PRO
178
A
ARG
179
n
179
ARG
179
A
LEU
180
n
180
LEU
180
A
MET
181
n
181
MET
181
A
SER
182
n
182
SER
182
A
ARG
183
n
183
ARG
183
A
ALA
184
n
184
ALA
184
A
ALA
185
n
185
ALA
185
A
PRO
186
n
186
PRO
186
A
ALA
187
n
187
ALA
187
A
THR
188
n
188
THR
188
A
LEU
189
n
189
LEU
189
A
ALA
190
n
190
ALA
190
A
ASP
191
n
191
ASP
191
A
PHE
192
n
192
PHE
192
A
VAL
193
n
193
VAL
193
A
ALA
194
n
194
ALA
194
A
ARG
195
n
195
ARG
195
A
TYR
196
n
196
TYR
196
A
HIS
197
n
197
HIS
197
A
ALA
198
n
198
ALA
198
A
ALA
199
n
199
ALA
199
A
GLN
200
n
200
GLN
200
A
GLY
201
n
201
GLY
201
A
VAL
202
n
202
VAL
202
A
ASP
203
n
203
ASP
203
A
LEU
204
n
204
LEU
204
A
ARG
205
n
205
ARG
205
A
PHE
206
n
206
PHE
206
A
GLU
207
n
207
GLU
207
A
ARG
208
n
208
ARG
208
A
SER
209
n
209
SER
209
A
VAL
210
n
210
VAL
210
A
THR
211
n
211
THR
211
A
GLY
212
n
212
GLY
212
A
SER
213
n
213
SER
213
A
VAL
214
n
214
VAL
214
A
ASP
215
n
215
ASP
215
A
GLY
216
n
216
GLY
216
A
VAL
217
n
217
VAL
217
A
VAL
218
n
218
VAL
218
A
LEU
219
n
219
LEU
219
A
LEU
220
n
220
LEU
220
A
ASP
221
n
221
ASP
221
A
ASP
222
n
222
ASP
222
A
GLY
223
n
223
GLY
223
A
THR
224
n
224
THR
224
A
ARG
225
n
225
ARG
225
A
ILE
226
n
226
ILE
226
A
ALA
227
n
227
ALA
227
A
ALA
228
n
228
ALA
228
A
ASP
229
n
229
ASP
229
A
MET
230
n
230
MET
230
A
VAL
231
n
231
VAL
231
A
VAL
232
n
232
VAL
232
A
VAL
233
n
233
VAL
233
A
GLY
234
n
234
GLY
234
A
ILE
235
n
235
ILE
235
A
GLY
236
n
236
GLY
236
A
VAL
237
n
237
VAL
237
A
LEU
238
n
238
LEU
238
A
ALA
239
n
239
ALA
239
A
ASN
240
n
240
ASN
240
A
ASP
241
n
241
ASP
241
A
ALA
242
n
242
ALA
242
A
LEU
243
n
243
LEU
243
A
ALA
244
n
244
ALA
244
A
ARG
245
n
245
ARG
245
A
ALA
246
n
246
ALA
246
A
ALA
247
n
247
ALA
247
A
GLY
248
n
248
GLY
248
A
LEU
249
n
249
LEU
249
A
ALA
250
n
250
ALA
250
A
CYS
251
n
251
CYS
251
A
ASP
252
n
252
ASP
252
A
ASP
253
n
253
ASP
253
A
GLY
254
n
254
GLY
254
A
ILE
255
n
255
ILE
255
A
PHE
256
n
256
PHE
256
A
VAL
257
n
257
VAL
257
A
ASP
258
n
258
ASP
258
A
ALA
259
n
259
ALA
259
A
TYR
260
n
260
TYR
260
A
GLY
261
n
261
GLY
261
A
ARG
262
n
262
ARG
262
A
THR
263
n
263
THR
263
A
THR
264
n
264
THR
264
A
CYS
265
n
265
CYS
265
A
PRO
266
n
266
PRO
266
A
ASP
267
n
267
ASP
267
A
VAL
268
n
268
VAL
268
A
TYR
269
n
269
TYR
269
A
ALA
270
n
270
ALA
270
A
LEU
271
n
271
LEU
271
A
GLY
272
n
272
GLY
272
A
ASP
273
n
273
ASP
273
A
VAL
274
n
274
VAL
274
A
THR
275
n
275
THR
275
A
ARG
276
n
276
ARG
276
A
GLN
277
n
277
GLN
277
A
ARG
278
n
278
ARG
278
A
ASN
279
n
279
ASN
279
A
PRO
280
n
280
PRO
280
A
LEU
281
n
281
LEU
281
A
SER
282
n
282
SER
282
A
GLY
283
n
283
GLY
283
A
ARG
284
n
284
ARG
284
A
PHE
285
n
285
PHE
285
A
GLU
286
n
286
GLU
286
A
ARG
287
n
287
ARG
287
A
ILE
288
n
288
ILE
288
A
GLU
289
n
289
GLU
289
A
THR
290
n
290
THR
290
A
TRP
291
n
291
TRP
291
A
SER
292
n
292
SER
292
A
ASN
293
n
293
ASN
293
A
ALA
294
n
294
ALA
294
A
GLN
295
n
295
GLN
295
A
ASN
296
n
296
ASN
296
A
GLN
297
n
297
GLN
297
A
GLY
298
n
298
GLY
298
A
ILE
299
n
299
ILE
299
A
ALA
300
n
300
ALA
300
A
VAL
301
n
301
VAL
301
A
ALA
302
n
302
ALA
302
A
ARG
303
n
303
ARG
303
A
HIS
304
n
304
HIS
304
A
LEU
305
n
305
LEU
305
A
VAL
306
n
306
VAL
306
A
ASP
307
n
307
ASP
307
A
PRO
308
n
308
PRO
308
A
THR
309
n
309
THR
309
A
ALA
310
n
310
ALA
310
A
PRO
311
n
311
PRO
311
A
GLY
312
n
312
GLY
312
A
TYR
313
n
313
TYR
313
A
ALA
314
n
314
ALA
314
A
GLU
315
n
315
GLU
315
A
LEU
316
n
316
LEU
316
A
PRO
317
n
317
PRO
317
A
TRP
318
n
318
TRP
318
A
TYR
319
n
319
TYR
319
A
TRP
320
n
320
TRP
320
A
SER
321
n
321
SER
321
A
ASP
322
n
322
ASP
322
A
GLN
323
n
323
GLN
323
A
GLY
324
n
324
GLY
324
A
ALA
325
n
325
ALA
325
A
LEU
326
n
326
LEU
326
A
ARG
327
n
327
ARG
327
A
ILE
328
n
328
ILE
328
A
GLN
329
n
329
GLN
329
A
VAL
330
n
330
VAL
330
A
ALA
331
n
331
ALA
331
A
GLY
332
n
332
GLY
332
A
LEU
333
n
333
LEU
333
A
ALA
334
n
334
ALA
334
A
SER
335
n
335
SER
335
A
GLY
336
n
336
GLY
336
A
ASP
337
n
337
ASP
337
A
GLU
338
n
338
GLU
338
A
GLU
339
n
339
GLU
339
A
ILE
340
n
340
ILE
340
A
VAL
341
n
341
VAL
341
A
ARG
342
n
342
ARG
342
A
GLY
343
n
343
GLY
343
A
GLU
344
n
344
GLU
344
A
VAL
345
n
345
VAL
345
A
SER
346
n
346
SER
346
A
LEU
347
n
347
LEU
347
A
ASP
348
n
348
ASP
348
A
ALA
349
n
349
ALA
349
A
PRO
350
n
350
PRO
350
A
LYS
351
n
351
LYS
351
A
PHE
352
n
352
PHE
352
A
THR
353
n
353
THR
353
A
LEU
354
n
354
LEU
354
A
ILE
355
n
355
ILE
355
A
GLU
356
n
356
GLU
356
A
LEU
357
n
357
LEU
357
A
GLN
358
n
358
GLN
358
A
LYS
359
n
359
LYS
359
A
GLY
360
n
360
GLY
360
A
ARG
361
n
361
ARG
361
A
ILE
362
n
362
ILE
362
A
VAL
363
n
363
VAL
363
A
GLY
364
n
364
GLY
364
A
ALA
365
n
365
ALA
365
A
THR
366
n
366
THR
366
A
CYS
367
n
367
CYS
367
A
VAL
368
n
368
VAL
368
A
ASN
369
n
369
ASN
369
A
ASN
370
n
370
ASN
370
A
ALA
371
n
371
ALA
371
A
ARG
372
n
372
ARG
372
A
ASP
373
n
373
ASP
373
A
PHE
374
n
374
PHE
374
A
ALA
375
n
375
ALA
375
A
PRO
376
n
376
PRO
376
A
LEU
377
n
377
LEU
377
A
ARG
378
n
378
ARG
378
A
ARG
379
n
379
ARG
379
A
LEU
380
n
380
LEU
380
A
LEU
381
n
381
LEU
381
A
ALA
382
n
382
ALA
382
A
VAL
383
n
383
VAL
383
A
GLY
384
n
384
GLY
384
A
ALA
385
n
385
ALA
385
A
LYS
386
n
386
LYS
386
A
PRO
387
n
387
PRO
387
A
ASP
388
n
388
ASP
388
A
ARG
389
n
389
ARG
389
A
ALA
390
n
390
ALA
390
A
ALA
391
n
391
ALA
391
A
LEU
392
n
392
LEU
392
A
ALA
393
n
393
ALA
393
A
ASP
394
n
394
ASP
394
A
PRO
395
n
395
PRO
395
A
ALA
396
n
396
ALA
396
A
THR
397
n
397
THR
397
A
ASP
398
n
398
ASP
398
A
LEU
399
n
399
LEU
399
A
ARG
400
n
400
ARG
400
A
LYS
401
n
401
LYS
401
A
LEU
402
n
402
LEU
402
A
ALA
403
n
403
ALA
403
A
ALA
404
n
404
ALA
404
A
n
405
405
A
n
406
406
A
n
407
407
A
n
408
408
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_444
-y-1,-x-1,-z-1/6
crystal symmetry operation
-48.9340000000
-84.7561742176
-28.4280000000
A
O
LEU
77
A
O
LEU
77
A
N
VAL
37
A
N
VAL
37
A
O
VAL
38
A
O
VAL
38
A
N
VAL
12
A
N
VAL
12
A
N
LEU
13
A
N
LEU
13
A
O
VAL
106
A
O
VAL
106
A
N
LEU
107
A
N
LEU
107
A
O
TYR
269
A
O
TYR
269
A
N
GLN
83
A
N
GLN
83
A
O
ALA
93
A
O
ALA
93
A
N
VAL
92
A
N
VAL
92
A
O
LEU
100
A
O
LEU
100
A
N
ALA
112
A
N
ALA
112
A
O
LEU
238
A
O
LEU
238
A
N
HIS
127
A
N
HIS
127
A
O
VAL
233
A
O
VAL
233
A
O
MET
230
A
O
MET
230
A
N
LEU
149
A
N
LEU
149
A
N
LEU
148
A
N
LEU
148
A
O
HIS
170
A
O
HIS
170
A
N
LEU
173
A
N
LEU
173
A
O
ARG
205
A
O
ARG
205
A
N
GLY
212
A
N
GLY
212
A
O
LEU
219
A
O
LEU
219
A
N
VAL
218
A
N
VAL
218
A
O
ILE
226
A
O
ILE
226
A
N
ILE
255
A
N
ILE
255
A
O
ARG
276
A
O
ARG
276
A
N
GLN
277
A
N
GLN
277
A
O
GLU
286
A
O
GLU
286
A
N
TYR
319
A
N
TYR
319
A
O
VAL
330
A
O
VAL
330
A
N
ALA
331
A
N
ALA
331
A
O
ALA
365
A
O
ALA
365
A
O
GLY
364
A
O
GLY
364
A
N
GLU
356
A
N
GLU
356
A
O
ILE
355
A
O
ILE
355
A
N
ILE
340
A
N
ILE
340
1
A
CD
LYS
53
A
CD
LYS
53
1
Y
1
A
CE
LYS
53
A
CE
LYS
53
1
Y
1
A
NZ
LYS
53
A
NZ
LYS
53
1
Y
1
A
CG
HIS
58
A
CG
HIS
58
1
Y
1
A
ND1
HIS
58
A
ND1
HIS
58
1
Y
1
A
CD2
HIS
58
A
CD2
HIS
58
1
Y
1
A
CE1
HIS
58
A
CE1
HIS
58
1
Y
1
A
NE2
HIS
58
A
NE2
HIS
58
1
Y
1
A
CE
LYS
63
A
CE
LYS
63
1
Y
1
A
NZ
LYS
63
A
NZ
LYS
63
1
Y
1
A
CG
LYS
69
A
CG
LYS
69
1
Y
1
A
CD
LYS
69
A
CD
LYS
69
1
Y
1
A
CE
LYS
69
A
CE
LYS
69
1
Y
1
A
NZ
LYS
69
A
NZ
LYS
69
1
Y
1
A
CD
GLN
88
A
CD
GLN
88
1
Y
1
A
OE1
GLN
88
A
OE1
GLN
88
1
Y
1
A
NE2
GLN
88
A
NE2
GLN
88
1
Y
1
A
CG
GLN
120
A
CG
GLN
120
1
Y
1
A
CD
GLN
120
A
CD
GLN
120
1
Y
1
A
OE1
GLN
120
A
OE1
GLN
120
1
Y
1
A
NE2
GLN
120
A
NE2
GLN
120
1
Y
1
A
CG
ARG
143
A
CG
ARG
143
1
Y
1
A
CD
ARG
143
A
CD
ARG
143
1
Y
1
A
NE
ARG
143
A
NE
ARG
143
1
Y
1
A
CZ
ARG
143
A
CZ
ARG
143
1
Y
1
A
NH1
ARG
143
A
NH1
ARG
143
1
Y
1
A
NH2
ARG
143
A
NH2
ARG
143
1
Y
1
A
CZ
ARG
327
A
CZ
ARG
327
1
Y
1
A
NH1
ARG
327
A
NH1
ARG
327
1
Y
1
A
NH2
ARG
327
A
NH2
ARG
327
1
Y
1
A
CG
GLU
344
A
CG
GLU
344
1
Y
1
A
CD
GLU
344
A
CD
GLU
344
1
Y
1
A
OE1
GLU
344
A
OE1
GLU
344
1
Y
1
A
OE2
GLU
344
A
OE2
GLU
344
1
Y
1
A
CG
ASP
348
A
CG
ASP
348
1
Y
1
A
OD1
ASP
348
A
OD1
ASP
348
1
Y
1
A
OD2
ASP
348
A
OD2
ASP
348
1
Y
1
A
CD
LYS
359
A
CD
LYS
359
1
Y
1
A
CE
LYS
359
A
CE
LYS
359
1
Y
1
A
NZ
LYS
359
A
NZ
LYS
359
1
Y
1
A
CG
ARG
361
A
CG
ARG
361
1
Y
1
A
CD
ARG
361
A
CD
ARG
361
1
Y
1
A
NE
ARG
361
A
NE
ARG
361
1
Y
1
A
CZ
ARG
361
A
CZ
ARG
361
1
Y
1
A
NH1
ARG
361
A
NH1
ARG
361
1
Y
1
A
NH2
ARG
361
A
NH2
ARG
361
1
Y
1
A
CD
ARG
372
A
CD
ARG
372
1
Y
1
A
NE
ARG
372
A
NE
ARG
372
1
Y
1
A
CZ
ARG
372
A
CZ
ARG
372
1
Y
1
A
NH1
ARG
372
A
NH1
ARG
372
1
Y
1
A
NH2
ARG
372
A
NH2
ARG
372
1
Y
1
A
CG
ARG
379
A
CG
ARG
379
1
Y
1
A
CD
ARG
379
A
CD
ARG
379
1
Y
1
A
NE
ARG
379
A
NE
ARG
379
1
Y
1
A
CZ
ARG
379
A
CZ
ARG
379
1
Y
1
A
NH1
ARG
379
A
NH1
ARG
379
1
Y
1
A
NH2
ARG
379
A
NH2
ARG
379
1
Y
1
A
CG
ARG
400
A
CG
ARG
400
1
Y
1
A
CD
ARG
400
A
CD
ARG
400
1
Y
1
A
NE
ARG
400
A
NE
ARG
400
1
Y
1
A
CZ
ARG
400
A
CZ
ARG
400
1
Y
1
A
NH1
ARG
400
A
NH1
ARG
400
1
Y
1
A
NH2
ARG
400
A
NH2
ARG
400
1
Y
1
A
CG
LYS
401
A
CG
LYS
401
1
Y
1
A
CD
LYS
401
A
CD
LYS
401
1
Y
1
A
CE
LYS
401
A
CE
LYS
401
1
Y
1
A
NZ
LYS
401
A
NZ
LYS
401
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
GLN
3
A
GLN
3
1
Y
1
A
GLU
4
A
GLU
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
ALA
405
A
ALA
405
1
Y
1
A
VAL
406
A
VAL
406
1
Y
1
A
ALA
407
A
ALA
407
1
Y
1
A
ALA
408
A
ALA
408
1
Y
1
A
LYS
53
-132.25
-106.45
1
A
ALA
71
-118.29
68.21
1
A
ARG
130
-138.07
-34.11
1
A
LEU
142
-98.51
57.03
1
A
ASP
252
-155.87
87.47
1
A
PRO
308
-59.85
-9.49
1
A
ALA
349
45.74
74.29
1
A
LYS
351
-164.27
111.51
1
A
ASN
370
-154.07
52.88
53.640
20.2479
4.430
0.2310
0.2056
0.2069
1.9500
19.8550
1743
33109
34852
5.0000
97.2000
1.000
0.090
0.8546
0.2200
Random
1
2.050
MOLECULAR REPLACEMENT
21.4100
0.9000
1.1100
2YVF
ML
FLAT BULK SOLVENT MODEL
1.9500
19.8550
101
3081
68
0
2912
0.007
3031
1.176
4143
0.076
490
0.005
540
14.822
1070
0.2984
0.2409
2.0074
144
2739
2883
12
99.0000
0.3160
0.2289
2.0721
144
2744
2888
12
99.0000
0.2614
0.2205
2.1461
144
2731
2875
12
98.0000
0.2286
0.2240
2.2319
146
2764
2910
12
98.0000
0.2406
0.2147
2.3334
144
2738
2882
12
98.0000
0.2979
0.2252
2.4562
144
2743
2887
12
98.0000
0.2708
0.2302
2.6098
144
2736
2880
12
98.0000
0.2643
0.2411
2.8107
145
2755
2900
12
97.0000
0.2550
0.2378
3.0926
145
2754
2899
12
97.0000
0.2145
0.2010
3.5380
146
2766
2912
12
96.0000
0.1871
0.1730
4.4492
147
2794
2941
12
96.0000
0.1936
0.1737
19.8560
150
2845
2995
12
93.0000
25.880
1.95
19.86
4H4Q
34855
34855
0
0
1
97.10
1.95
2.06
1
98.8
data collection
ADSC
Quantum
phasing
MOLREP
refinement
PHENIX
(phenix.refine: 1.8_1069)
data reduction
XDS
data scaling
XSCALE
Crystal Structure of Ferredoxin reductase, BphA4 E175Q/Q177K (reduced form)
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
GLY
16
A
GLY
16
HELX_P
A
GLY
30
A
GLY
30
1
1
15
A
ARG
48
A
ARG
48
HELX_P
A
SER
52
A
SER
52
5
2
5
A
LYS
53
A
LYS
53
HELX_P
A
GLY
59
A
GLY
59
1
3
7
A
ASP
60
A
ASP
60
HELX_P
A
ILE
64
A
ILE
64
5
4
5
A
LEU
116
A
LEU
116
HELX_P
A
GLN
120
A
GLN
120
5
5
5
A
THR
131
A
THR
131
HELX_P
A
ALA
140
A
ALA
140
1
6
10
A
GLY
154
A
GLY
154
HELX_P
A
ALA
167
A
ALA
167
1
7
14
A
PRO
186
A
PRO
186
HELX_P
A
GLN
200
A
GLN
200
1
8
15
A
ASP
241
A
ASP
241
HELX_P
A
GLY
248
A
GLY
248
1
9
8
A
THR
290
A
THR
290
HELX_P
A
ASP
307
A
ASP
307
1
10
18
A
ASN
370
A
ASN
370
HELX_P
A
VAL
383
A
VAL
383
1
11
14
A
ASP
388
A
ASP
388
HELX_P
A
ASP
394
A
ASP
394
1
12
7
A
ASP
398
A
ASP
398
HELX_P
A
ALA
403
A
ALA
403
1
13
6
OXIDOREDUCTASE
Flavoprotein, OXIDOREDUCTASE
A
ALA
8
A
ALA
8
1
A
PRO
9
A
PRO
9
-4.42
E7FJB9_9BURK
UNP
1
1
E7FJB9
MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGV
TAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLEL
AATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLAN
DALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYW
SDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLR
KLAAAVAA
1
408
4H4Q
1
408
E7FJB9
A
1
1
408
1
GLU
engineered mutation
GLN
175
4H4Q
A
E7FJB9
UNP
175
175
1
GLN
engineered mutation
LYS
177
4H4Q
A
E7FJB9
UNP
177
177
5
3
2
5
3
3
5
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
75
A
GLU
75
A
LEU
78
A
LEU
78
A
ILE
35
A
ILE
35
A
GLY
39
A
GLY
39
A
VAL
10
A
VAL
10
A
LEU
13
A
LEU
13
A
THR
104
A
THR
104
A
LEU
107
A
LEU
107
A
VAL
268
A
VAL
268
A
ALA
270
A
ALA
270
A
ALA
82
A
ALA
82
A
ASP
86
A
ASP
86
A
THR
91
A
THR
91
A
LEU
94
A
LEU
94
A
THR
99
A
THR
99
A
PRO
101
A
PRO
101
A
ALA
111
A
ALA
111
A
PRO
113
A
PRO
113
A
VAL
237
A
VAL
237
A
ALA
239
A
ALA
239
A
VAL
126
A
VAL
126
A
THR
128
A
THR
128
A
MET
230
A
MET
230
A
VAL
233
A
VAL
233
A
ARG
147
A
ARG
147
A
VAL
151
A
VAL
151
A
HIS
170
A
HIS
170
A
GLN
175
A
GLN
175
A
ASP
203
A
ASP
203
A
PHE
206
A
PHE
206
A
VAL
210
A
VAL
210
A
VAL
214
A
VAL
214
A
VAL
217
A
VAL
217
A
LEU
220
A
LEU
220
A
ARG
225
A
ARG
225
A
ALA
227
A
ALA
227
A
ILE
255
A
ILE
255
A
PHE
256
A
PHE
256
A
THR
275
A
THR
275
A
ASN
279
A
ASN
279
A
ARG
284
A
ARG
284
A
GLU
286
A
GLU
286
A
TRP
318
A
TRP
318
A
GLN
323
A
GLN
323
A
LEU
326
A
LEU
326
A
GLY
332
A
GLY
332
A
ARG
361
A
ARG
361
A
VAL
368
A
VAL
368
A
PHE
352
A
PHE
352
A
GLN
358
A
GLN
358
A
GLU
338
A
GLU
338
A
ARG
342
A
ARG
342
BINDING SITE FOR RESIDUE FMT A 501
A
FMT
501
Software
5
BINDING SITE FOR RESIDUE FMT A 502
A
FMT
502
Software
5
BINDING SITE FOR RESIDUE FMT A 503
A
FMT
503
Software
4
BINDING SITE FOR RESIDUE FMT A 504
A
FMT
504
Software
3
BINDING SITE FOR RESIDUE FMT A 505
A
FMT
505
Software
4
BINDING SITE FOR RESIDUE FAD A 506
A
FAD
506
Software
32
A
ASP
54
A
ASP
54
5
1_555
A
HIS
58
A
HIS
58
5
1_555
A
GLY
59
A
GLY
59
5
1_555
A
ASP
60
A
ASP
60
5
1_555
A
ASP
215
A
ASP
215
5
5_554
A
THR
123
A
THR
123
5
1_555
A
MET
124
A
MET
124
5
1_555
A
SER
213
A
SER
213
5
1_555
A
ASP
215
A
ASP
215
5
1_555
A
GLY
216
A
GLY
216
5
1_555
A
ARG
327
A
ARG
327
4
1_555
A
ASN
369
A
ASN
369
4
1_555
A
ASN
370
A
ASN
370
4
1_555
A
ALA
371
A
ALA
371
4
1_555
A
ARG
225
A
ARG
225
3
5_554
A
TRP
320
A
TRP
320
3
1_555
A
ASP
322
A
ASP
322
3
1_555
A
ALA
115
A
ALA
115
4
1_555
A
LEU
116
A
LEU
116
4
1_555
A
VAL
126
A
VAL
126
4
1_555
A
HOH
698
H
HOH
4
1_555
A
GLY
14
A
GLY
14
32
1_555
A
GLY
16
A
GLY
16
32
1_555
A
LEU
17
A
LEU
17
32
1_555
A
ALA
18
A
ALA
18
32
1_555
A
VAL
38
A
VAL
38
32
1_555
A
ASP
40
A
ASP
40
32
1_555
A
GLU
41
A
GLU
41
32
1_555
A
ARG
48
A
ARG
48
32
1_555
A
PRO
49
A
PRO
49
32
1_555
A
ALA
82
A
ALA
82
32
1_555
A
ALA
108
A
ALA
108
32
1_555
A
THR
109
A
THR
109
32
1_555
A
GLY
110
A
GLY
110
32
1_555
A
ARG
130
A
ARG
130
32
1_555
A
ILE
156
A
ILE
156
32
1_555
A
GLU
159
A
GLU
159
32
1_555
A
GLY
272
A
GLY
272
32
1_555
A
ASP
273
A
ASP
273
32
1_555
A
GLU
289
A
GLU
289
32
1_555
A
THR
290
A
THR
290
32
1_555
A
TRP
291
A
TRP
291
32
1_555
A
ALA
294
A
ALA
294
32
1_555
A
TYR
319
A
TYR
319
32
1_555
A
TRP
320
A
TRP
320
32
1_555
A
HOH
603
H
HOH
32
1_555
A
HOH
604
H
HOH
32
1_555
A
HOH
610
H
HOH
32
1_555
A
HOH
613
H
HOH
32
1_555
A
HOH
619
H
HOH
32
1_555
A
HOH
627
H
HOH
32
1_555
A
HOH
654
H
HOH
32
1_555
A
HOH
683
H
HOH
32
1_555
178
P 61 2 2