0.026938 0.000000 0.000000 0.000000 0.010852 0.000000 0.000000 0.000000 0.010870 0.00000 0.00000 0.00000 Kim, Y. Chhor, G. Endres, M. Joachimiak, A. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 37.122 92.152 91.999 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Crystal Structure of Transcriptional Antiterminator from Listeria monocytogenes EGD-e 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2012-08-18 ADSC QUANTUM 315r double crystal monochromator SINGLE WAVELENGTH M x-ray 1 0.97935 1.0 19-ID APS 0.97935 SYNCHROTRON APS BEAMLINE 19-ID 15056.078 Lmo2241 protein 1 man polymer 96.063 SULFATE ION 2 syn non-polymer 92.094 GLYCEROL 4 syn non-polymer 18.015 water 95 nat water Transcriptional antiterminator BglG no yes SNA(MSE)FTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGT FIANQTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG SNAMFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIAN QTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG A MCSG-APC106881 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n EGD-e sample lmo2241 169963 Listeria monocytogenes 511693 Escherichia coli BL21 magic plasmid pMCSG7 1 2.61 52.92 VAPOR DIFFUSION, SITTING DROP 7.5 2.0 M ammonium sulfate, 0.1 M HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K 289 Midwest Center for Structural Genomics MCSG PSI:Biology repository Initial release 1 0 2012-10-17 Y RCSB Y RCSB 2012-09-27 REL REL SO4 SULFATE ION GOL GLYCEROL HOH water SO4 151 2 SO4 SO4 201 A SO4 152 2 SO4 SO4 202 A GOL 153 3 GOL GOL 203 A GOL 154 3 GOL GOL 204 A GOL 155 3 GOL GOL 205 A GOL 156 3 GOL GOL 206 A HOH 1 4 HOH HOH 301 A HOH 2 4 HOH HOH 302 A HOH 3 4 HOH HOH 303 A HOH 4 4 HOH HOH 304 A HOH 5 4 HOH HOH 305 A HOH 6 4 HOH HOH 306 A HOH 7 4 HOH HOH 307 A HOH 8 4 HOH HOH 308 A HOH 9 4 HOH HOH 309 A HOH 10 4 HOH HOH 310 A HOH 11 4 HOH HOH 311 A HOH 12 4 HOH HOH 312 A HOH 13 4 HOH HOH 313 A HOH 14 4 HOH HOH 314 A HOH 15 4 HOH HOH 315 A HOH 16 4 HOH HOH 316 A HOH 17 4 HOH HOH 317 A HOH 18 4 HOH HOH 318 A HOH 19 4 HOH HOH 319 A HOH 20 4 HOH HOH 320 A HOH 21 4 HOH HOH 321 A HOH 22 4 HOH HOH 322 A HOH 23 4 HOH HOH 323 A HOH 24 4 HOH HOH 324 A HOH 25 4 HOH HOH 325 A HOH 26 4 HOH HOH 326 A HOH 27 4 HOH HOH 327 A HOH 28 4 HOH HOH 328 A HOH 29 4 HOH HOH 329 A HOH 30 4 HOH HOH 330 A HOH 31 4 HOH HOH 331 A HOH 32 4 HOH HOH 332 A HOH 33 4 HOH HOH 333 A HOH 34 4 HOH HOH 334 A HOH 35 4 HOH HOH 335 A HOH 36 4 HOH HOH 336 A HOH 37 4 HOH HOH 337 A HOH 38 4 HOH HOH 338 A HOH 39 4 HOH HOH 339 A HOH 40 4 HOH HOH 340 A HOH 41 4 HOH HOH 341 A HOH 42 4 HOH HOH 342 A HOH 43 4 HOH HOH 343 A HOH 44 4 HOH HOH 344 A HOH 45 4 HOH HOH 345 A HOH 46 4 HOH HOH 346 A HOH 47 4 HOH HOH 347 A HOH 48 4 HOH HOH 348 A HOH 49 4 HOH HOH 349 A HOH 50 4 HOH HOH 350 A HOH 51 4 HOH HOH 351 A HOH 52 4 HOH HOH 352 A HOH 53 4 HOH HOH 353 A HOH 54 4 HOH HOH 354 A HOH 55 4 HOH HOH 355 A HOH 56 4 HOH HOH 356 A HOH 57 4 HOH HOH 357 A HOH 58 4 HOH HOH 358 A HOH 59 4 HOH HOH 359 A HOH 60 4 HOH HOH 360 A HOH 61 4 HOH HOH 361 A HOH 62 4 HOH HOH 362 A HOH 63 4 HOH HOH 363 A HOH 64 4 HOH HOH 364 A HOH 65 4 HOH HOH 365 A HOH 66 4 HOH HOH 366 A HOH 67 4 HOH HOH 367 A HOH 68 4 HOH HOH 368 A HOH 69 4 HOH HOH 369 A HOH 70 4 HOH HOH 370 A HOH 71 4 HOH HOH 371 A HOH 72 4 HOH HOH 372 A HOH 73 4 HOH HOH 373 A HOH 74 4 HOH HOH 374 A HOH 75 4 HOH HOH 375 A HOH 76 4 HOH HOH 376 A HOH 77 4 HOH HOH 377 A HOH 78 4 HOH HOH 378 A HOH 79 4 HOH HOH 379 A HOH 80 4 HOH HOH 380 A HOH 81 4 HOH HOH 381 A HOH 82 4 HOH HOH 382 A HOH 83 4 HOH HOH 383 A HOH 84 4 HOH HOH 384 A HOH 85 4 HOH HOH 385 A HOH 86 4 HOH HOH 386 A HOH 87 4 HOH HOH 387 A HOH 88 4 HOH HOH 388 A HOH 89 4 HOH HOH 389 A HOH 90 4 HOH HOH 390 A HOH 91 4 HOH HOH 391 A HOH 92 4 HOH HOH 392 A HOH 93 4 HOH HOH 393 A HOH 94 4 HOH HOH 394 A HOH 95 4 HOH HOH 395 A SER -2 n 1 SER -2 A ASN -1 n 2 ASN -1 A ALA 0 n 3 ALA 0 A MSE 1 n 4 MSE 1 A PHE 2 n 5 PHE 2 A THR 3 n 6 THR 3 A ILE 4 n 7 ILE 4 A ASN 5 n 8 ASN 5 A THR 6 n 9 THR 6 A LYS 7 n 10 LYS 7 A SER 8 n 11 SER 8 A GLN 9 n 12 GLN 9 A LEU 10 n 13 LEU 10 A PRO 11 n 14 PRO 11 A ILE 12 n 15 ILE 12 A TYR 13 n 16 TYR 13 A GLU 14 n 17 GLU 14 A GLN 15 n 18 GLN 15 A ILE 16 n 19 ILE 16 A VAL 17 n 20 VAL 17 A GLN 18 n 21 GLN 18 A LYS 19 n 22 LYS 19 A ILE 20 n 23 ILE 20 A LYS 21 n 24 LYS 21 A GLU 22 n 25 GLU 22 A GLN 23 n 26 GLN 23 A VAL 24 n 27 VAL 24 A VAL 25 n 28 VAL 25 A LYS 26 n 29 LYS 26 A GLY 27 n 30 GLY 27 A VAL 28 n 31 VAL 28 A LEU 29 n 32 LEU 29 A GLN 30 n 33 GLN 30 A GLU 31 n 34 GLU 31 A GLY 32 n 35 GLY 32 A GLU 33 n 36 GLU 33 A LYS 34 n 37 LYS 34 A ILE 35 n 38 ILE 35 A LEU 36 n 39 LEU 36 A SER 37 n 40 SER 37 A ILE 38 n 41 ILE 38 A ARG 39 n 42 ARG 39 A GLU 40 n 43 GLU 40 A PHE 41 n 44 PHE 41 A ALA 42 n 45 ALA 42 A SER 43 n 46 SER 43 A ARG 44 n 47 ARG 44 A ILE 45 n 48 ILE 45 A GLY 46 n 49 GLY 46 A VAL 47 n 50 VAL 47 A ASN 48 n 51 ASN 48 A PRO 49 n 52 PRO 49 A ASN 50 n 53 ASN 50 A THR 51 n 54 THR 51 A VAL 52 n 55 VAL 52 A SER 53 n 56 SER 53 A LYS 54 n 57 LYS 54 A ALA 55 n 58 ALA 55 A TYR 56 n 59 TYR 56 A GLN 57 n 60 GLN 57 A GLU 58 n 61 GLU 58 A LEU 59 n 62 LEU 59 A GLU 60 n 63 GLU 60 A ARG 61 n 64 ARG 61 A GLN 62 n 65 GLN 62 A GLU 63 n 66 GLU 63 A VAL 64 n 67 VAL 64 A ILE 65 n 68 ILE 65 A ILE 66 n 69 ILE 66 A THR 67 n 70 THR 67 A VAL 68 n 71 VAL 68 A LYS 69 n 72 LYS 69 A GLY 70 n 73 GLY 70 A LYS 71 n 74 LYS 71 A GLY 72 n 75 GLY 72 A THR 73 n 76 THR 73 A PHE 74 n 77 PHE 74 A ILE 75 n 78 ILE 75 A ALA 76 n 79 ALA 76 A ASN 77 n 80 ASN 77 A GLN 78 n 81 GLN 78 A THR 79 n 82 THR 79 A ASP 80 n 83 ASP 80 A LYS 81 n 84 LYS 81 A LEU 82 n 85 LEU 82 A SER 83 n 86 SER 83 A SER 84 n 87 SER 84 A PRO 85 n 88 PRO 85 A LYS 86 n 89 LYS 86 A LYS 87 n 90 LYS 87 A LEU 88 n 91 LEU 88 A ALA 89 n 92 ALA 89 A GLU 90 n 93 GLU 90 A THR 91 n 94 THR 91 A ARG 92 n 95 ARG 92 A THR 93 n 96 THR 93 A LYS 94 n 97 LYS 94 A LEU 95 n 98 LEU 95 A LYS 96 n 99 LYS 96 A GLU 97 n 100 GLU 97 A THR 98 n 101 THR 98 A ILE 99 n 102 ILE 99 A LEU 100 n 103 LEU 100 A ASP 101 n 104 ASP 101 A LEU 102 n 105 LEU 102 A VAL 103 n 106 VAL 103 A TYR 104 n 107 TYR 104 A LEU 105 n 108 LEU 105 A GLY 106 n 109 GLY 106 A VAL 107 n 110 VAL 107 A ASN 108 n 111 ASN 108 A ILE 109 n 112 ILE 109 A GLU 110 n 113 GLU 110 A GLU 111 n 114 GLU 111 A ILE 112 n 115 ILE 112 A HIS 113 n 116 HIS 113 A LYS 114 n 117 LYS 114 A LEU 115 n 118 LEU 115 A ALA 116 n 119 ALA 116 A ASP 117 n 120 ASP 117 A GLU 118 n 121 GLU 118 A TYR 119 n 122 TYR 119 A SER 120 n 123 SER 120 A GLN 121 n 124 GLN 121 A ASP 122 n 125 ASP 122 A ILE 123 n 126 ILE 123 A ILE 124 n 127 ILE 124 A GLY 125 n 128 GLY 125 A GLY 126 n 129 GLY 126 A ASP 127 n 130 ASP 127 A VAL 128 n 131 VAL 128 A VAL 129 n 132 VAL 129 A GLU 130 n 133 GLU 130 A GLY 131 n 134 GLY 131 A 3.6167 0.1284 0.4682 2.0471 2.1276 2.1916 0.2654 -0.1750 0.0432 -0.3380 -0.5005 0.1522 0.0221 0.5765 -0.0226 0.3477 -0.0019 0.0396 0.2913 0.0520 0.3187 refined 36.5178 28.9087 44.1480 X-RAY DIFFRACTION 3.1312 0.0180 -0.8239 0.5548 0.3131 0.6157 0.0437 0.1775 0.6054 -0.1333 0.0383 0.0520 -0.1556 -0.1145 -0.0743 0.2086 -0.0201 0.0072 0.1961 0.0199 0.2069 refined 33.4578 32.3691 50.3781 X-RAY DIFFRACTION 2.1025 -0.1058 -0.0004 1.7504 -0.4675 0.1225 -0.0661 -0.0892 -0.0095 0.2138 0.1060 0.1817 -0.0476 0.0296 -0.0412 0.2519 -0.0174 0.0023 0.2782 -0.0082 0.1891 refined 31.1897 23.3205 59.9162 X-RAY DIFFRACTION 2.8279 2.1133 -1.3414 4.0724 0.2881 1.4695 -0.1394 -0.3350 -0.4655 -0.1142 -0.1006 -0.0263 0.2948 0.3208 0.0566 0.1732 -0.0018 0.0079 0.2228 0.0301 0.1936 refined 43.6251 21.3911 50.1312 X-RAY DIFFRACTION 1.2436 -2.1648 -1.2496 3.7461 2.2689 1.6970 0.1415 -0.3304 0.6398 0.0575 0.1245 -0.5355 -0.5497 0.4953 -0.0973 0.2126 -0.0267 -0.0306 0.2601 -0.0223 0.2759 refined 43.2727 32.4524 55.4082 X-RAY DIFFRACTION 1.5994 -0.8580 0.8040 3.2649 -2.0556 1.9690 -0.1652 -0.1532 0.3979 0.2409 -0.0325 -0.7592 -0.0554 0.1461 0.0825 0.2147 0.0112 0.0063 0.2780 -0.0101 0.1649 refined 38.5750 27.6788 64.2830 X-RAY DIFFRACTION 0.3282 -0.6067 0.5742 6.5356 -1.1531 0.9870 -0.2897 0.1589 0.3394 1.8750 -0.4427 1.7920 -0.9068 -1.3771 -0.5914 0.6957 0.1707 0.2409 0.7219 0.0320 0.5938 refined 27.1850 35.8900 65.7999 X-RAY DIFFRACTION 0.6831 0.4394 0.2590 1.7484 -2.5655 4.8315 -0.0849 -0.0977 0.2240 0.4385 -0.1588 -0.3516 -0.3451 0.3368 0.0515 0.2586 0.0001 -0.0157 0.1587 -0.0111 0.2707 refined 28.8638 50.4468 48.6727 X-RAY DIFFRACTION 0.4653 0.4731 -0.6086 3.0094 -1.5652 1.1261 -0.0975 0.3786 -0.1527 -0.5504 0.2998 0.5579 0.5298 -0.5003 -0.1269 0.2700 -0.0410 -0.0514 0.2345 0.0166 0.3295 refined 18.8174 41.9495 41.3354 X-RAY DIFFRACTION 0.0285 -0.0026 0.0541 0.1120 -0.0818 0.1104 -0.2305 -0.2654 -0.4542 1.1258 -0.0182 -0.3364 1.0396 0.0440 0.1339 0.7512 0.0520 0.0684 0.3685 0.0018 0.5212 refined 18.6744 20.5562 54.7818 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' and (resid -2 through 11 ) X-RAY DIFFRACTION 2 chain 'A' and (resid 12 through 26 ) X-RAY DIFFRACTION 3 chain 'A' and (resid 27 through 37 ) X-RAY DIFFRACTION 4 chain 'A' and (resid 38 through 48 ) X-RAY DIFFRACTION 5 chain 'A' and (resid 49 through 61 ) X-RAY DIFFRACTION 6 chain 'A' and (resid 62 through 75 ) X-RAY DIFFRACTION 7 chain 'A' and (resid 76 through 84 ) X-RAY DIFFRACTION 8 chain 'A' and (resid 85 through 104 ) X-RAY DIFFRACTION 9 chain 'A' and (resid 105 through 124 ) X-RAY DIFFRACTION 10 chain 'A' and (resid 125 through 131 ) author_and_software_defined_assembly PISA 2 dimeric 6400 -91 15790 A MSE 1 SELENOMETHIONINE A MSE 4 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_566 x,-y+1,-z+1 crystal symmetry operation 0.0000000000 92.1520000000 91.9990000000 A N ILE 35 A N ILE 38 A O THR 73 A O THR 76 A O GLY 72 A O GLY 75 A N VAL 68 A N VAL 71 1 A HOH 367 H HOH 1 A A OD2 O ASP HOH 122 348 2.16 B 33.9 0.216 0.173 0.177 0.177 1.905 32.248 1221 12249 12249 9.97 96.26 0.19 random 1 mixed THROUGHOUT 0.00 SAD 20.93 0.90 1.11 MLHL FLAT BULK SOLVENT MODEL 1.905 32.248 95 1183 34 0 1054 0.006 1180 0.854 1596 15.344 465 0.061 182 0.003 207 0.2541 0.2218 1.9814 124 1145 1269 92.00 0.2311 0.1862 2.0715 134 1211 1345 96.00 0.2522 0.1691 2.1807 134 1209 1343 97.00 0.2270 0.1658 2.3173 135 1222 1357 97.00 0.2524 0.1724 2.4962 135 1224 1359 97.00 0.2205 0.1801 2.7473 138 1233 1371 98.00 0.2292 0.1768 3.1445 139 1248 1387 97.00 0.2009 0.1644 3.9606 139 1252 1391 97.00 0.1929 0.1701 32.2530 143 1284 1427 95.00 28.4 1.9 50 4HAM 12529 12529 0.0 0.0 0.087 1 9.2 4.6 98.3 1.90 1.93 2.2 607 0.561 1 4.6 99.5 data collection SBC-Collect data collection HKL-3000 phasing HKL-3000 model building PHENIX refinement PHENIX (phenix.refine: 1.8.1_1161) data reduction HKL-3000 data scaling HKL-3000 phasing PHENIX Lmo2241 protein Crystal Structure of Transcriptional Antiterminator from Listeria monocytogenes EGD-e 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N dimer is formed by: x,y,z and x,-y+1,-z+1 A PRO 11 A PRO 14 HELX_P A LYS 26 A LYS 29 1 1 16 A SER 37 A SER 40 HELX_P A GLY 46 A GLY 49 1 2 10 A ASN 48 A ASN 51 HELX_P A GLN 62 A GLN 65 1 3 15 A SER 84 A SER 87 HELX_P A LEU 105 A LEU 108 1 4 22 A ASN 108 A ASN 111 HELX_P A GLY 125 A GLY 128 1 5 18 covale 1.330 A ALA 0 A C ALA 3 1_555 A MSE 1 A N MSE 4 1_555 covale 1.325 A MSE 1 A C MSE 4 1_555 A PHE 2 A N PHE 5 1_555 TRANSCRIPTION Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, winged helix-turn-helix, four helix bundle, transcriptional regulator, TRANSCRIPTION Q8Y535_LISMO UNP 1 1 Q8Y535 MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTD KLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG 1 131 4HAM 1 131 Q8Y535 A 1 4 134 1 EXPRESSION TAG SER -2 4HAM A Q8Y535 UNP 1 1 EXPRESSION TAG ASN -1 4HAM A Q8Y535 UNP 2 1 EXPRESSION TAG ALA 0 4HAM A Q8Y535 UNP 3 3 anti-parallel anti-parallel A LYS 34 A LYS 37 A ILE 35 A ILE 38 A GLY 72 A GLY 75 A ILE 75 A ILE 78 A ILE 65 A ILE 68 A VAL 68 A VAL 71 BINDING SITE FOR RESIDUE SO4 A 201 Software 3 BINDING SITE FOR RESIDUE SO4 A 202 Software 5 BINDING SITE FOR RESIDUE GOL A 203 Software 3 BINDING SITE FOR RESIDUE GOL A 204 Software 4 BINDING SITE FOR RESIDUE GOL A 205 Software 4 BINDING SITE FOR RESIDUE GOL A 206 Software 5 A SER 8 A SER 11 3 1_555 A GLN 9 A GLN 12 3 1_555 A THR 93 A THR 96 3 4_566 A ALA 0 A ALA 3 5 8_556 A MSE 1 A MSE 4 5 8_556 A ARG 44 A ARG 47 5 8_556 A ASN 48 A ASN 51 5 1_555 A HOH 366 H HOH 5 1_555 A SER 37 A SER 40 3 1_555 A ILE 38 A ILE 41 3 1_555 A ARG 39 A ARG 42 3 1_555 A GLN 78 A GLN 81 4 1_555 A LYS 81 A LYS 84 4 1_555 A VAL 103 A VAL 106 4 4_566 A TYR 104 A TYR 107 4 4_566 A GLU 33 A GLU 36 4 1_555 A LYS 34 A LYS 37 4 1_555 A LYS 71 A LYS 74 4 3_756 A HOH 376 H HOH 4 1_555 A PRO 11 A PRO 14 5 1_555 A ILE 12 A ILE 15 5 1_555 A HOH 305 H HOH 5 1_555 A HOH 314 H HOH 5 1_555 A HOH 377 H HOH 5 1_555 20 C 2 2 21