0.008501 0.004908 0.000000 0.000000 0.009816 0.000000 0.000000 0.000000 0.006661 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.000 90.000 120.000 117.638 117.638 150.125 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of a putative periplasmic proteins (BACEGG_01429) from Bacteroides eggerthii DSM 20697 at 2.40 A resolution 10.2210/pdb4hbr/pdb pdb_00004hbr 100 1 Vertical focusing mirror; double crystal Si(111) monochromator CCD 2012-08-09 MARMOSAIC 325 mm CCD double crystal Si(111) SINGLE WAVELENGTH M x-ray 1 0.97923 1.0 BL14-1 SSRL 0.97923 SYNCHROTRON SSRL BEAMLINE BL14-1 16014.239 Putative periplasmic protein UNP residues 22-160 4 man polymer 18.015 water 284 nat water no yes GGYAPDSVQIALKK(MSE)YPTAAGIAWSQDKAYYVADFV(MSE)NGFDTRVWFTPDAEWV(MSE)KQTDWETLDEVPAA VFNAFAASEFSDGVVQNVTWVQFPEWQPIVAIQVGKPN(MSE)Q(MSE)KYQILFTPKGEVLRQQNITNAYNTLGASTFL GGYAPDSVQIALKKMYPTAAGIAWSQDKAYYVADFVMNGFDTRVWFTPDAEWVMKQTDWETLDEVPAAVFNAFAASEFSD GVVQNVTWVQFPEWQPIVAIQVGKPNMQMKYQILFTPKGEVLRQQNITNAYNTLGASTFL A,B,C,D JCSG-417680 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n DSM 20697 sample BACEGG_01429, ZP_03458652.1 483216 Bacteroides eggerthii 562 Escherichia coli PB1 Plasmid SpeedET 1 4.68 73.72 VAPOR DIFFUSION, SITTING DROP 6.5 0.20M magnesium chloride, 10.00% polyethylene glycol 3000, 0.1M sodium cacodylate pH 6.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 Joint Center for Structural Genomics JCSG PSI:Biology software database_2 struct_conn struct_ref_seq_dif repository Initial release Refinement description Database references Derived calculations 1 0 2013-02-27 1 1 2017-11-15 1 2 2023-02-01 _software.classification _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details Y RCSB Y RCSB 2012-09-28 REL REL HOH water THE CONSTRUCT (22-160) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. HOH 162 2 HOH HOH 201 A HOH 165 2 HOH HOH 202 A HOH 166 2 HOH HOH 203 A HOH 174 2 HOH HOH 204 A HOH 183 2 HOH HOH 205 A HOH 184 2 HOH HOH 206 A HOH 185 2 HOH HOH 207 A HOH 189 2 HOH HOH 208 A HOH 192 2 HOH HOH 209 A HOH 194 2 HOH HOH 210 A HOH 195 2 HOH HOH 211 A HOH 196 2 HOH HOH 212 A HOH 197 2 HOH HOH 213 A HOH 200 2 HOH HOH 214 A HOH 205 2 HOH HOH 215 A HOH 208 2 HOH HOH 216 A HOH 211 2 HOH HOH 217 A HOH 214 2 HOH HOH 218 A HOH 217 2 HOH HOH 219 A HOH 220 2 HOH HOH 220 A HOH 222 2 HOH HOH 221 A HOH 227 2 HOH HOH 222 A HOH 228 2 HOH HOH 223 A HOH 240 2 HOH HOH 224 A HOH 242 2 HOH HOH 225 A HOH 243 2 HOH HOH 226 A HOH 247 2 HOH HOH 227 A HOH 248 2 HOH HOH 228 A HOH 251 2 HOH HOH 229 A HOH 253 2 HOH HOH 230 A HOH 254 2 HOH HOH 231 A HOH 256 2 HOH HOH 232 A HOH 261 2 HOH HOH 233 A HOH 263 2 HOH HOH 234 A HOH 265 2 HOH HOH 235 A HOH 269 2 HOH HOH 236 A HOH 274 2 HOH HOH 237 A HOH 277 2 HOH HOH 238 A HOH 281 2 HOH HOH 239 A HOH 284 2 HOH HOH 240 A HOH 286 2 HOH HOH 241 A HOH 287 2 HOH HOH 242 A HOH 289 2 HOH HOH 243 A HOH 294 2 HOH HOH 244 A HOH 297 2 HOH HOH 245 A HOH 303 2 HOH HOH 246 A HOH 304 2 HOH HOH 247 A HOH 306 2 HOH HOH 248 A HOH 307 2 HOH HOH 249 A HOH 309 2 HOH HOH 250 A HOH 316 2 HOH HOH 251 A HOH 317 2 HOH HOH 252 A HOH 325 2 HOH HOH 253 A HOH 329 2 HOH HOH 254 A HOH 331 2 HOH HOH 255 A HOH 338 2 HOH HOH 256 A HOH 341 2 HOH HOH 257 A HOH 346 2 HOH HOH 258 A HOH 353 2 HOH HOH 259 A HOH 355 2 HOH HOH 260 A HOH 357 2 HOH HOH 261 A HOH 360 2 HOH HOH 262 A HOH 363 2 HOH HOH 263 A HOH 365 2 HOH HOH 264 A HOH 370 2 HOH HOH 265 A HOH 376 2 HOH HOH 266 A HOH 377 2 HOH HOH 267 A HOH 379 2 HOH HOH 268 A HOH 381 2 HOH HOH 269 A HOH 382 2 HOH HOH 270 A HOH 385 2 HOH HOH 271 A HOH 387 2 HOH HOH 272 A HOH 390 2 HOH HOH 273 A HOH 391 2 HOH HOH 274 A HOH 392 2 HOH HOH 275 A HOH 393 2 HOH HOH 276 A HOH 395 2 HOH HOH 277 A HOH 399 2 HOH HOH 278 A HOH 402 2 HOH HOH 279 A HOH 408 2 HOH HOH 280 A HOH 409 2 HOH HOH 281 A HOH 413 2 HOH HOH 282 A HOH 414 2 HOH HOH 283 A HOH 417 2 HOH HOH 284 A HOH 418 2 HOH HOH 285 A HOH 428 2 HOH HOH 286 A HOH 431 2 HOH HOH 287 A HOH 432 2 HOH HOH 288 A HOH 434 2 HOH HOH 289 A HOH 435 2 HOH HOH 290 A HOH 436 2 HOH HOH 291 A HOH 437 2 HOH HOH 292 A HOH 439 2 HOH HOH 293 A HOH 440 2 HOH HOH 294 A HOH 164 2 HOH HOH 201 B HOH 175 2 HOH HOH 202 B HOH 176 2 HOH HOH 203 B HOH 177 2 HOH HOH 204 B HOH 179 2 HOH HOH 205 B HOH 180 2 HOH HOH 206 B HOH 181 2 HOH HOH 207 B HOH 188 2 HOH HOH 208 B HOH 190 2 HOH HOH 209 B HOH 210 2 HOH HOH 210 B HOH 212 2 HOH HOH 211 B HOH 213 2 HOH HOH 212 B HOH 216 2 HOH HOH 213 B HOH 218 2 HOH HOH 214 B HOH 219 2 HOH HOH 215 B HOH 221 2 HOH HOH 216 B HOH 223 2 HOH HOH 217 B HOH 230 2 HOH HOH 218 B HOH 234 2 HOH HOH 219 B HOH 237 2 HOH HOH 220 B HOH 257 2 HOH HOH 221 B HOH 262 2 HOH HOH 222 B HOH 266 2 HOH HOH 223 B HOH 267 2 HOH HOH 224 B HOH 273 2 HOH HOH 225 B HOH 278 2 HOH HOH 226 B HOH 280 2 HOH HOH 227 B HOH 282 2 HOH HOH 228 B HOH 288 2 HOH HOH 229 B HOH 291 2 HOH HOH 230 B HOH 301 2 HOH HOH 231 B HOH 308 2 HOH HOH 232 B HOH 310 2 HOH HOH 233 B HOH 311 2 HOH HOH 234 B HOH 315 2 HOH HOH 235 B HOH 321 2 HOH HOH 236 B HOH 322 2 HOH HOH 237 B HOH 324 2 HOH HOH 238 B HOH 327 2 HOH HOH 239 B HOH 328 2 HOH HOH 240 B HOH 333 2 HOH HOH 241 B HOH 334 2 HOH HOH 242 B HOH 335 2 HOH HOH 243 B HOH 337 2 HOH HOH 244 B HOH 344 2 HOH HOH 245 B HOH 347 2 HOH HOH 246 B HOH 350 2 HOH HOH 247 B HOH 354 2 HOH HOH 248 B HOH 356 2 HOH HOH 249 B HOH 359 2 HOH HOH 250 B HOH 367 2 HOH HOH 251 B HOH 369 2 HOH HOH 252 B HOH 373 2 HOH HOH 253 B HOH 398 2 HOH HOH 254 B HOH 401 2 HOH HOH 255 B HOH 406 2 HOH HOH 256 B HOH 410 2 HOH HOH 257 B HOH 412 2 HOH HOH 258 B HOH 420 2 HOH HOH 259 B HOH 422 2 HOH HOH 260 B HOH 424 2 HOH HOH 261 B HOH 442 2 HOH HOH 262 B HOH 167 2 HOH HOH 201 C HOH 172 2 HOH HOH 202 C HOH 173 2 HOH HOH 203 C HOH 186 2 HOH HOH 204 C HOH 187 2 HOH HOH 205 C HOH 193 2 HOH HOH 206 C HOH 198 2 HOH HOH 207 C HOH 203 2 HOH HOH 208 C HOH 226 2 HOH HOH 209 C HOH 233 2 HOH HOH 210 C HOH 238 2 HOH HOH 211 C HOH 239 2 HOH HOH 212 C HOH 241 2 HOH HOH 213 C HOH 245 2 HOH HOH 214 C HOH 249 2 HOH HOH 215 C HOH 264 2 HOH HOH 216 C HOH 268 2 HOH HOH 217 C HOH 275 2 HOH HOH 218 C HOH 279 2 HOH HOH 219 C HOH 283 2 HOH HOH 220 C HOH 285 2 HOH HOH 221 C HOH 290 2 HOH HOH 222 C HOH 292 2 HOH HOH 223 C HOH 298 2 HOH HOH 224 C HOH 313 2 HOH HOH 225 C HOH 314 2 HOH HOH 226 C HOH 318 2 HOH HOH 227 C HOH 326 2 HOH HOH 228 C HOH 342 2 HOH HOH 229 C HOH 345 2 HOH HOH 230 C HOH 348 2 HOH HOH 231 C HOH 351 2 HOH HOH 232 C HOH 361 2 HOH HOH 233 C HOH 366 2 HOH HOH 234 C HOH 374 2 HOH HOH 235 C HOH 383 2 HOH HOH 236 C HOH 389 2 HOH HOH 237 C HOH 396 2 HOH HOH 238 C HOH 403 2 HOH HOH 239 C HOH 404 2 HOH HOH 240 C HOH 411 2 HOH HOH 241 C HOH 415 2 HOH HOH 242 C HOH 416 2 HOH HOH 243 C HOH 421 2 HOH HOH 244 C HOH 423 2 HOH HOH 245 C HOH 430 2 HOH HOH 246 C HOH 433 2 HOH HOH 247 C HOH 438 2 HOH HOH 248 C HOH 441 2 HOH HOH 249 C HOH 444 2 HOH HOH 250 C HOH 161 2 HOH HOH 201 D HOH 163 2 HOH HOH 202 D HOH 168 2 HOH HOH 203 D HOH 169 2 HOH HOH 204 D HOH 170 2 HOH HOH 205 D HOH 171 2 HOH HOH 206 D HOH 178 2 HOH HOH 207 D HOH 182 2 HOH HOH 208 D HOH 191 2 HOH HOH 209 D HOH 199 2 HOH HOH 210 D HOH 201 2 HOH HOH 211 D HOH 202 2 HOH HOH 212 D HOH 204 2 HOH HOH 213 D HOH 206 2 HOH HOH 214 D HOH 207 2 HOH HOH 215 D HOH 209 2 HOH HOH 216 D HOH 215 2 HOH HOH 217 D HOH 224 2 HOH HOH 218 D HOH 225 2 HOH HOH 219 D HOH 229 2 HOH HOH 220 D HOH 231 2 HOH HOH 221 D HOH 232 2 HOH HOH 222 D HOH 235 2 HOH HOH 223 D HOH 236 2 HOH HOH 224 D HOH 244 2 HOH HOH 225 D HOH 246 2 HOH HOH 226 D HOH 250 2 HOH HOH 227 D HOH 252 2 HOH HOH 228 D HOH 255 2 HOH HOH 229 D HOH 258 2 HOH HOH 230 D HOH 259 2 HOH HOH 231 D HOH 260 2 HOH HOH 232 D HOH 270 2 HOH HOH 233 D HOH 271 2 HOH HOH 234 D HOH 272 2 HOH HOH 235 D HOH 276 2 HOH HOH 236 D HOH 293 2 HOH HOH 237 D HOH 295 2 HOH HOH 238 D HOH 296 2 HOH HOH 239 D HOH 299 2 HOH HOH 240 D HOH 300 2 HOH HOH 241 D HOH 302 2 HOH HOH 242 D HOH 305 2 HOH HOH 243 D HOH 312 2 HOH HOH 244 D HOH 319 2 HOH HOH 245 D HOH 320 2 HOH HOH 246 D HOH 323 2 HOH HOH 247 D HOH 330 2 HOH HOH 248 D HOH 332 2 HOH HOH 249 D HOH 336 2 HOH HOH 250 D HOH 339 2 HOH HOH 251 D HOH 340 2 HOH HOH 252 D HOH 343 2 HOH HOH 253 D HOH 349 2 HOH HOH 254 D HOH 352 2 HOH HOH 255 D HOH 358 2 HOH HOH 256 D HOH 362 2 HOH HOH 257 D HOH 364 2 HOH HOH 258 D HOH 368 2 HOH HOH 259 D HOH 371 2 HOH HOH 260 D HOH 372 2 HOH HOH 261 D HOH 375 2 HOH HOH 262 D HOH 378 2 HOH HOH 263 D HOH 380 2 HOH HOH 264 D HOH 384 2 HOH HOH 265 D HOH 386 2 HOH HOH 266 D HOH 388 2 HOH HOH 267 D HOH 394 2 HOH HOH 268 D HOH 397 2 HOH HOH 269 D HOH 400 2 HOH HOH 270 D HOH 405 2 HOH HOH 271 D HOH 407 2 HOH HOH 272 D HOH 419 2 HOH HOH 273 D HOH 425 2 HOH HOH 274 D HOH 426 2 HOH HOH 275 D HOH 427 2 HOH HOH 276 D HOH 429 2 HOH HOH 277 D HOH 443 2 HOH HOH 278 D GLY 0 n 1 GLY 0 A GLY 22 n 2 GLY 22 A TYR 23 n 3 TYR 23 A ALA 24 n 4 ALA 24 A PRO 25 n 5 PRO 25 A ASP 26 n 6 ASP 26 A SER 27 n 7 SER 27 A VAL 28 n 8 VAL 28 A GLN 29 n 9 GLN 29 A ILE 30 n 10 ILE 30 A ALA 31 n 11 ALA 31 A LEU 32 n 12 LEU 32 A LYS 33 n 13 LYS 33 A LYS 34 n 14 LYS 34 A MSE 35 n 15 MSE 35 A TYR 36 n 16 TYR 36 A PRO 37 n 17 PRO 37 A THR 38 n 18 THR 38 A ALA 39 n 19 ALA 39 A ALA 40 n 20 ALA 40 A GLY 41 n 21 GLY 41 A ILE 42 n 22 ILE 42 A ALA 43 n 23 ALA 43 A TRP 44 n 24 TRP 44 A SER 45 n 25 SER 45 A GLN 46 n 26 GLN 46 A ASP 47 n 27 ASP 47 A LYS 48 n 28 LYS 48 A ALA 49 n 29 ALA 49 A TYR 50 n 30 TYR 50 A TYR 51 n 31 TYR 51 A VAL 52 n 32 VAL 52 A ALA 53 n 33 ALA 53 A ASP 54 n 34 ASP 54 A PHE 55 n 35 PHE 55 A VAL 56 n 36 VAL 56 A MSE 57 n 37 MSE 57 A ASN 58 n 38 ASN 58 A GLY 59 n 39 GLY 59 A PHE 60 n 40 PHE 60 A ASP 61 n 41 ASP 61 A THR 62 n 42 THR 62 A ARG 63 n 43 ARG 63 A VAL 64 n 44 VAL 64 A TRP 65 n 45 TRP 65 A PHE 66 n 46 PHE 66 A THR 67 n 47 THR 67 A PRO 68 n 48 PRO 68 A ASP 69 n 49 ASP 69 A ALA 70 n 50 ALA 70 A GLU 71 n 51 GLU 71 A TRP 72 n 52 TRP 72 A VAL 73 n 53 VAL 73 A MSE 74 n 54 MSE 74 A LYS 75 n 55 LYS 75 A GLN 76 n 56 GLN 76 A THR 77 n 57 THR 77 A ASP 78 n 58 ASP 78 A TRP 79 n 59 TRP 79 A GLU 80 n 60 GLU 80 A THR 81 n 61 THR 81 A LEU 82 n 62 LEU 82 A ASP 83 n 63 ASP 83 A GLU 84 n 64 GLU 84 A VAL 85 n 65 VAL 85 A PRO 86 n 66 PRO 86 A ALA 87 n 67 ALA 87 A ALA 88 n 68 ALA 88 A VAL 89 n 69 VAL 89 A PHE 90 n 70 PHE 90 A ASN 91 n 71 ASN 91 A ALA 92 n 72 ALA 92 A PHE 93 n 73 PHE 93 A ALA 94 n 74 ALA 94 A ALA 95 n 75 ALA 95 A SER 96 n 76 SER 96 A GLU 97 n 77 GLU 97 A PHE 98 n 78 PHE 98 A SER 99 n 79 SER 99 A ASP 100 n 80 ASP 100 A GLY 101 n 81 GLY 101 A VAL 102 n 82 VAL 102 A VAL 103 n 83 VAL 103 A GLN 104 n 84 GLN 104 A ASN 105 n 85 ASN 105 A VAL 106 n 86 VAL 106 A THR 107 n 87 THR 107 A TRP 108 n 88 TRP 108 A VAL 109 n 89 VAL 109 A GLN 110 n 90 GLN 110 A PHE 111 n 91 PHE 111 A PRO 112 n 92 PRO 112 A GLU 113 n 93 GLU 113 A TRP 114 n 94 TRP 114 A GLN 115 n 95 GLN 115 A PRO 116 n 96 PRO 116 A ILE 117 n 97 ILE 117 A VAL 118 n 98 VAL 118 A ALA 119 n 99 ALA 119 A ILE 120 n 100 ILE 120 A GLN 121 n 101 GLN 121 A VAL 122 n 102 VAL 122 A GLY 123 n 103 GLY 123 A LYS 124 n 104 LYS 124 A PRO 125 n 105 PRO 125 A ASN 126 n 106 ASN 126 A MSE 127 n 107 MSE 127 A GLN 128 n 108 GLN 128 A MSE 129 n 109 MSE 129 A LYS 130 n 110 LYS 130 A TYR 131 n 111 TYR 131 A GLN 132 n 112 GLN 132 A ILE 133 n 113 ILE 133 A LEU 134 n 114 LEU 134 A PHE 135 n 115 PHE 135 A THR 136 n 116 THR 136 A PRO 137 n 117 PRO 137 A LYS 138 n 118 LYS 138 A GLY 139 n 119 GLY 139 A GLU 140 n 120 GLU 140 A VAL 141 n 121 VAL 141 A LEU 142 n 122 LEU 142 A ARG 143 n 123 ARG 143 A GLN 144 n 124 GLN 144 A GLN 145 n 125 GLN 145 A ASN 146 n 126 ASN 146 A ILE 147 n 127 ILE 147 A THR 148 n 128 THR 148 A ASN 149 n 129 ASN 149 A ALA 150 n 130 ALA 150 A TYR 151 n 131 TYR 151 A ASN 152 n 132 ASN 152 A THR 153 n 133 THR 153 A LEU 154 n 134 LEU 154 A GLY 155 n 135 GLY 155 A ALA 156 n 136 ALA 156 A SER 157 n 137 SER 157 A THR 158 n 138 THR 158 A PHE 159 n 139 PHE 159 A LEU 160 n 140 LEU 160 A GLY 0 n 1 GLY 0 B GLY 22 n 2 GLY 22 B TYR 23 n 3 TYR 23 B ALA 24 n 4 ALA 24 B PRO 25 n 5 PRO 25 B ASP 26 n 6 ASP 26 B SER 27 n 7 SER 27 B VAL 28 n 8 VAL 28 B GLN 29 n 9 GLN 29 B ILE 30 n 10 ILE 30 B ALA 31 n 11 ALA 31 B LEU 32 n 12 LEU 32 B LYS 33 n 13 LYS 33 B LYS 34 n 14 LYS 34 B MSE 35 n 15 MSE 35 B TYR 36 n 16 TYR 36 B PRO 37 n 17 PRO 37 B THR 38 n 18 THR 38 B ALA 39 n 19 ALA 39 B ALA 40 n 20 ALA 40 B GLY 41 n 21 GLY 41 B ILE 42 n 22 ILE 42 B ALA 43 n 23 ALA 43 B TRP 44 n 24 TRP 44 B SER 45 n 25 SER 45 B GLN 46 n 26 GLN 46 B ASP 47 n 27 ASP 47 B LYS 48 n 28 LYS 48 B ALA 49 n 29 ALA 49 B TYR 50 n 30 TYR 50 B TYR 51 n 31 TYR 51 B VAL 52 n 32 VAL 52 B ALA 53 n 33 ALA 53 B ASP 54 n 34 ASP 54 B PHE 55 n 35 PHE 55 B VAL 56 n 36 VAL 56 B MSE 57 n 37 MSE 57 B ASN 58 n 38 ASN 58 B GLY 59 n 39 GLY 59 B PHE 60 n 40 PHE 60 B ASP 61 n 41 ASP 61 B THR 62 n 42 THR 62 B ARG 63 n 43 ARG 63 B VAL 64 n 44 VAL 64 B TRP 65 n 45 TRP 65 B PHE 66 n 46 PHE 66 B THR 67 n 47 THR 67 B PRO 68 n 48 PRO 68 B ASP 69 n 49 ASP 69 B ALA 70 n 50 ALA 70 B GLU 71 n 51 GLU 71 B TRP 72 n 52 TRP 72 B VAL 73 n 53 VAL 73 B MSE 74 n 54 MSE 74 B LYS 75 n 55 LYS 75 B GLN 76 n 56 GLN 76 B THR 77 n 57 THR 77 B ASP 78 n 58 ASP 78 B TRP 79 n 59 TRP 79 B GLU 80 n 60 GLU 80 B THR 81 n 61 THR 81 B LEU 82 n 62 LEU 82 B ASP 83 n 63 ASP 83 B GLU 84 n 64 GLU 84 B VAL 85 n 65 VAL 85 B PRO 86 n 66 PRO 86 B ALA 87 n 67 ALA 87 B ALA 88 n 68 ALA 88 B VAL 89 n 69 VAL 89 B PHE 90 n 70 PHE 90 B ASN 91 n 71 ASN 91 B ALA 92 n 72 ALA 92 B PHE 93 n 73 PHE 93 B ALA 94 n 74 ALA 94 B ALA 95 n 75 ALA 95 B SER 96 n 76 SER 96 B GLU 97 n 77 GLU 97 B PHE 98 n 78 PHE 98 B SER 99 n 79 SER 99 B ASP 100 n 80 ASP 100 B GLY 101 n 81 GLY 101 B VAL 102 n 82 VAL 102 B VAL 103 n 83 VAL 103 B GLN 104 n 84 GLN 104 B ASN 105 n 85 ASN 105 B VAL 106 n 86 VAL 106 B THR 107 n 87 THR 107 B TRP 108 n 88 TRP 108 B VAL 109 n 89 VAL 109 B GLN 110 n 90 GLN 110 B PHE 111 n 91 PHE 111 B PRO 112 n 92 PRO 112 B GLU 113 n 93 GLU 113 B TRP 114 n 94 TRP 114 B GLN 115 n 95 GLN 115 B PRO 116 n 96 PRO 116 B ILE 117 n 97 ILE 117 B VAL 118 n 98 VAL 118 B ALA 119 n 99 ALA 119 B ILE 120 n 100 ILE 120 B GLN 121 n 101 GLN 121 B VAL 122 n 102 VAL 122 B GLY 123 n 103 GLY 123 B LYS 124 n 104 LYS 124 B PRO 125 n 105 PRO 125 B ASN 126 n 106 ASN 126 B MSE 127 n 107 MSE 127 B GLN 128 n 108 GLN 128 B MSE 129 n 109 MSE 129 B LYS 130 n 110 LYS 130 B TYR 131 n 111 TYR 131 B GLN 132 n 112 GLN 132 B ILE 133 n 113 ILE 133 B LEU 134 n 114 LEU 134 B PHE 135 n 115 PHE 135 B THR 136 n 116 THR 136 B PRO 137 n 117 PRO 137 B LYS 138 n 118 LYS 138 B GLY 139 n 119 GLY 139 B GLU 140 n 120 GLU 140 B VAL 141 n 121 VAL 141 B LEU 142 n 122 LEU 142 B ARG 143 n 123 ARG 143 B GLN 144 n 124 GLN 144 B GLN 145 n 125 GLN 145 B ASN 146 n 126 ASN 146 B ILE 147 n 127 ILE 147 B THR 148 n 128 THR 148 B ASN 149 n 129 ASN 149 B ALA 150 n 130 ALA 150 B TYR 151 n 131 TYR 151 B ASN 152 n 132 ASN 152 B THR 153 n 133 THR 153 B LEU 154 n 134 LEU 154 B GLY 155 n 135 GLY 155 B ALA 156 n 136 ALA 156 B SER 157 n 137 SER 157 B THR 158 n 138 THR 158 B PHE 159 n 139 PHE 159 B LEU 160 n 140 LEU 160 B GLY 0 n 1 GLY 0 C GLY 22 n 2 GLY 22 C TYR 23 n 3 TYR 23 C ALA 24 n 4 ALA 24 C PRO 25 n 5 PRO 25 C ASP 26 n 6 ASP 26 C SER 27 n 7 SER 27 C VAL 28 n 8 VAL 28 C GLN 29 n 9 GLN 29 C ILE 30 n 10 ILE 30 C ALA 31 n 11 ALA 31 C LEU 32 n 12 LEU 32 C LYS 33 n 13 LYS 33 C LYS 34 n 14 LYS 34 C MSE 35 n 15 MSE 35 C TYR 36 n 16 TYR 36 C PRO 37 n 17 PRO 37 C THR 38 n 18 THR 38 C ALA 39 n 19 ALA 39 C ALA 40 n 20 ALA 40 C GLY 41 n 21 GLY 41 C ILE 42 n 22 ILE 42 C ALA 43 n 23 ALA 43 C TRP 44 n 24 TRP 44 C SER 45 n 25 SER 45 C GLN 46 n 26 GLN 46 C ASP 47 n 27 ASP 47 C LYS 48 n 28 LYS 48 C ALA 49 n 29 ALA 49 C TYR 50 n 30 TYR 50 C TYR 51 n 31 TYR 51 C VAL 52 n 32 VAL 52 C ALA 53 n 33 ALA 53 C ASP 54 n 34 ASP 54 C PHE 55 n 35 PHE 55 C VAL 56 n 36 VAL 56 C MSE 57 n 37 MSE 57 C ASN 58 n 38 ASN 58 C GLY 59 n 39 GLY 59 C PHE 60 n 40 PHE 60 C ASP 61 n 41 ASP 61 C THR 62 n 42 THR 62 C ARG 63 n 43 ARG 63 C VAL 64 n 44 VAL 64 C TRP 65 n 45 TRP 65 C PHE 66 n 46 PHE 66 C THR 67 n 47 THR 67 C PRO 68 n 48 PRO 68 C ASP 69 n 49 ASP 69 C ALA 70 n 50 ALA 70 C GLU 71 n 51 GLU 71 C TRP 72 n 52 TRP 72 C VAL 73 n 53 VAL 73 C MSE 74 n 54 MSE 74 C LYS 75 n 55 LYS 75 C GLN 76 n 56 GLN 76 C THR 77 n 57 THR 77 C ASP 78 n 58 ASP 78 C TRP 79 n 59 TRP 79 C GLU 80 n 60 GLU 80 C THR 81 n 61 THR 81 C LEU 82 n 62 LEU 82 C ASP 83 n 63 ASP 83 C GLU 84 n 64 GLU 84 C VAL 85 n 65 VAL 85 C PRO 86 n 66 PRO 86 C ALA 87 n 67 ALA 87 C ALA 88 n 68 ALA 88 C VAL 89 n 69 VAL 89 C PHE 90 n 70 PHE 90 C ASN 91 n 71 ASN 91 C ALA 92 n 72 ALA 92 C PHE 93 n 73 PHE 93 C ALA 94 n 74 ALA 94 C ALA 95 n 75 ALA 95 C SER 96 n 76 SER 96 C GLU 97 n 77 GLU 97 C PHE 98 n 78 PHE 98 C SER 99 n 79 SER 99 C ASP 100 n 80 ASP 100 C GLY 101 n 81 GLY 101 C VAL 102 n 82 VAL 102 C VAL 103 n 83 VAL 103 C GLN 104 n 84 GLN 104 C ASN 105 n 85 ASN 105 C VAL 106 n 86 VAL 106 C THR 107 n 87 THR 107 C TRP 108 n 88 TRP 108 C VAL 109 n 89 VAL 109 C GLN 110 n 90 GLN 110 C PHE 111 n 91 PHE 111 C PRO 112 n 92 PRO 112 C GLU 113 n 93 GLU 113 C TRP 114 n 94 TRP 114 C GLN 115 n 95 GLN 115 C PRO 116 n 96 PRO 116 C ILE 117 n 97 ILE 117 C VAL 118 n 98 VAL 118 C ALA 119 n 99 ALA 119 C ILE 120 n 100 ILE 120 C GLN 121 n 101 GLN 121 C VAL 122 n 102 VAL 122 C GLY 123 n 103 GLY 123 C LYS 124 n 104 LYS 124 C PRO 125 n 105 PRO 125 C ASN 126 n 106 ASN 126 C MSE 127 n 107 MSE 127 C GLN 128 n 108 GLN 128 C MSE 129 n 109 MSE 129 C LYS 130 n 110 LYS 130 C TYR 131 n 111 TYR 131 C GLN 132 n 112 GLN 132 C ILE 133 n 113 ILE 133 C LEU 134 n 114 LEU 134 C PHE 135 n 115 PHE 135 C THR 136 n 116 THR 136 C PRO 137 n 117 PRO 137 C LYS 138 n 118 LYS 138 C GLY 139 n 119 GLY 139 C GLU 140 n 120 GLU 140 C VAL 141 n 121 VAL 141 C LEU 142 n 122 LEU 142 C ARG 143 n 123 ARG 143 C GLN 144 n 124 GLN 144 C GLN 145 n 125 GLN 145 C ASN 146 n 126 ASN 146 C ILE 147 n 127 ILE 147 C THR 148 n 128 THR 148 C ASN 149 n 129 ASN 149 C ALA 150 n 130 ALA 150 C TYR 151 n 131 TYR 151 C ASN 152 n 132 ASN 152 C THR 153 n 133 THR 153 C LEU 154 n 134 LEU 154 C GLY 155 n 135 GLY 155 C ALA 156 n 136 ALA 156 C SER 157 n 137 SER 157 C THR 158 n 138 THR 158 C PHE 159 n 139 PHE 159 C LEU 160 n 140 LEU 160 C n 1 0 D GLY 22 n 2 GLY 22 D TYR 23 n 3 TYR 23 D ALA 24 n 4 ALA 24 D PRO 25 n 5 PRO 25 D ASP 26 n 6 ASP 26 D SER 27 n 7 SER 27 D VAL 28 n 8 VAL 28 D GLN 29 n 9 GLN 29 D ILE 30 n 10 ILE 30 D ALA 31 n 11 ALA 31 D LEU 32 n 12 LEU 32 D LYS 33 n 13 LYS 33 D LYS 34 n 14 LYS 34 D MSE 35 n 15 MSE 35 D TYR 36 n 16 TYR 36 D PRO 37 n 17 PRO 37 D THR 38 n 18 THR 38 D ALA 39 n 19 ALA 39 D ALA 40 n 20 ALA 40 D GLY 41 n 21 GLY 41 D ILE 42 n 22 ILE 42 D ALA 43 n 23 ALA 43 D TRP 44 n 24 TRP 44 D SER 45 n 25 SER 45 D GLN 46 n 26 GLN 46 D ASP 47 n 27 ASP 47 D LYS 48 n 28 LYS 48 D ALA 49 n 29 ALA 49 D TYR 50 n 30 TYR 50 D TYR 51 n 31 TYR 51 D VAL 52 n 32 VAL 52 D ALA 53 n 33 ALA 53 D ASP 54 n 34 ASP 54 D PHE 55 n 35 PHE 55 D VAL 56 n 36 VAL 56 D MSE 57 n 37 MSE 57 D ASN 58 n 38 ASN 58 D GLY 59 n 39 GLY 59 D PHE 60 n 40 PHE 60 D ASP 61 n 41 ASP 61 D THR 62 n 42 THR 62 D ARG 63 n 43 ARG 63 D VAL 64 n 44 VAL 64 D TRP 65 n 45 TRP 65 D PHE 66 n 46 PHE 66 D THR 67 n 47 THR 67 D PRO 68 n 48 PRO 68 D ASP 69 n 49 ASP 69 D ALA 70 n 50 ALA 70 D GLU 71 n 51 GLU 71 D TRP 72 n 52 TRP 72 D VAL 73 n 53 VAL 73 D MSE 74 n 54 MSE 74 D LYS 75 n 55 LYS 75 D GLN 76 n 56 GLN 76 D THR 77 n 57 THR 77 D ASP 78 n 58 ASP 78 D TRP 79 n 59 TRP 79 D GLU 80 n 60 GLU 80 D THR 81 n 61 THR 81 D LEU 82 n 62 LEU 82 D ASP 83 n 63 ASP 83 D GLU 84 n 64 GLU 84 D VAL 85 n 65 VAL 85 D PRO 86 n 66 PRO 86 D ALA 87 n 67 ALA 87 D ALA 88 n 68 ALA 88 D VAL 89 n 69 VAL 89 D PHE 90 n 70 PHE 90 D ASN 91 n 71 ASN 91 D ALA 92 n 72 ALA 92 D PHE 93 n 73 PHE 93 D ALA 94 n 74 ALA 94 D ALA 95 n 75 ALA 95 D SER 96 n 76 SER 96 D GLU 97 n 77 GLU 97 D PHE 98 n 78 PHE 98 D SER 99 n 79 SER 99 D ASP 100 n 80 ASP 100 D GLY 101 n 81 GLY 101 D VAL 102 n 82 VAL 102 D VAL 103 n 83 VAL 103 D GLN 104 n 84 GLN 104 D ASN 105 n 85 ASN 105 D VAL 106 n 86 VAL 106 D THR 107 n 87 THR 107 D TRP 108 n 88 TRP 108 D VAL 109 n 89 VAL 109 D GLN 110 n 90 GLN 110 D PHE 111 n 91 PHE 111 D PRO 112 n 92 PRO 112 D GLU 113 n 93 GLU 113 D TRP 114 n 94 TRP 114 D GLN 115 n 95 GLN 115 D PRO 116 n 96 PRO 116 D ILE 117 n 97 ILE 117 D VAL 118 n 98 VAL 118 D ALA 119 n 99 ALA 119 D ILE 120 n 100 ILE 120 D GLN 121 n 101 GLN 121 D VAL 122 n 102 VAL 122 D GLY 123 n 103 GLY 123 D LYS 124 n 104 LYS 124 D PRO 125 n 105 PRO 125 D ASN 126 n 106 ASN 126 D MSE 127 n 107 MSE 127 D GLN 128 n 108 GLN 128 D MSE 129 n 109 MSE 129 D LYS 130 n 110 LYS 130 D TYR 131 n 111 TYR 131 D GLN 132 n 112 GLN 132 D ILE 133 n 113 ILE 133 D LEU 134 n 114 LEU 134 D PHE 135 n 115 PHE 135 D THR 136 n 116 THR 136 D PRO 137 n 117 PRO 137 D LYS 138 n 118 LYS 138 D GLY 139 n 119 GLY 139 D GLU 140 n 120 GLU 140 D VAL 141 n 121 VAL 141 D LEU 142 n 122 LEU 142 D ARG 143 n 123 ARG 143 D GLN 144 n 124 GLN 144 D GLN 145 n 125 GLN 145 D ASN 146 n 126 ASN 146 D ILE 147 n 127 ILE 147 D THR 148 n 128 THR 148 D ASN 149 n 129 ASN 149 D ALA 150 n 130 ALA 150 D TYR 151 n 131 TYR 151 D ASN 152 n 132 ASN 152 D THR 153 n 133 THR 153 D LEU 154 n 134 LEU 154 D GLY 155 n 135 GLY 155 D ALA 156 n 136 ALA 156 D SER 157 n 137 SER 157 D THR 158 n 138 THR 158 D PHE 159 n 139 PHE 159 D LEU 160 n 140 LEU 160 D 2.0747 0.5483 -0.0507 2.9756 -0.6693 2.1374 -0.2726 0.4286 -0.0720 -0.2110 0.1202 -0.0280 0.0938 -0.0900 0.1524 -0.0338 -0.2113 0.0594 -0.0652 0.0110 -0.0977 refined 71.0530 34.8170 -16.3287 X-RAY DIFFRACTION 2.6291 0.9510 -1.3977 4.9545 -0.1208 3.0793 -0.1177 -0.0208 -0.3474 0.3768 -0.0270 -0.4867 0.1198 0.1551 0.1447 -0.0358 -0.0860 0.0053 -0.2874 -0.0302 0.0138 refined 66.0862 2.3004 3.1929 X-RAY DIFFRACTION 1.9199 0.7139 -0.6782 6.9000 0.8956 2.3775 -0.1530 0.3854 0.1950 -0.7031 0.0305 0.4958 0.1367 -0.4305 0.1226 -0.0478 -0.2298 -0.0411 -0.1334 -0.0245 -0.1330 refined 52.2439 2.7945 -16.4682 X-RAY DIFFRACTION 2.3156 0.5312 -0.1388 3.8303 -0.1906 1.7554 0.1511 -0.1830 -0.0543 0.4092 -0.0315 -0.2571 -0.0564 0.0087 -0.1195 0.0381 -0.1025 0.0728 -0.1946 -0.0030 -0.0710 refined 72.0723 26.4844 6.3325 X-RAY DIFFRACTION A 0 A 160 X-RAY DIFFRACTION 1 {A|0 - 160} B 0 B 160 X-RAY DIFFRACTION 2 {B|0 - 160} C 0 C 160 X-RAY DIFFRACTION 3 {C|0 - 160} D 22 D 160 X-RAY DIFFRACTION 4 {D|22 - 160} author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric A MSE 35 SELENOMETHIONINE A MSE 15 MET A MSE 57 SELENOMETHIONINE A MSE 37 MET A MSE 74 SELENOMETHIONINE A MSE 54 MET A MSE 127 SELENOMETHIONINE A MSE 107 MET A MSE 129 SELENOMETHIONINE A MSE 109 MET B MSE 35 SELENOMETHIONINE B MSE 15 MET B MSE 57 SELENOMETHIONINE B MSE 37 MET B MSE 74 SELENOMETHIONINE B MSE 54 MET B MSE 127 SELENOMETHIONINE B MSE 107 MET B MSE 129 SELENOMETHIONINE B MSE 109 MET C MSE 35 SELENOMETHIONINE C MSE 15 MET C MSE 57 SELENOMETHIONINE C MSE 37 MET C MSE 74 SELENOMETHIONINE C MSE 54 MET C MSE 127 SELENOMETHIONINE C MSE 107 MET C MSE 129 SELENOMETHIONINE C MSE 109 MET D MSE 35 SELENOMETHIONINE D MSE 15 MET D MSE 57 SELENOMETHIONINE D MSE 37 MET D MSE 74 SELENOMETHIONINE D MSE 54 MET D MSE 127 SELENOMETHIONINE D MSE 107 MET D MSE 129 SELENOMETHIONINE D MSE 109 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 45 A N SER 25 A O VAL 52 A O VAL 32 A N PHE 55 A N PHE 35 A O THR 62 A O THR 42 A N ASP 61 A N ASP 41 A O ASP 78 A O ASP 58 A N LYS 75 A N LYS 55 A O GLN 110 A O GLN 90 A N GLN 104 A N GLN 84 A O GLN 121 A O GLN 101 A N LYS 124 A N LYS 104 A O MSE 129 A O MSE 109 A N GLN 132 A N GLN 112 A O GLN 145 A O GLN 125 B N SER 45 B N SER 25 B O VAL 52 B O VAL 32 B N PHE 55 B N PHE 35 B O THR 62 B O THR 42 B N TRP 65 B N TRP 45 B O MSE 74 B O MSE 54 B N LYS 75 B N LYS 55 B O GLN 110 B O GLN 90 B N VAL 109 B N VAL 89 B O ILE 117 B O ILE 97 B N LYS 124 B N LYS 104 B O MSE 129 B O MSE 109 B N LEU 134 B N LEU 114 B O LEU 142 B O LEU 122 C N SER 45 C N SER 25 C O VAL 52 C O VAL 32 C N PHE 55 C N PHE 35 C O THR 62 C O THR 42 C N ASP 61 C N ASP 41 C O ASP 78 C O ASP 58 C N LYS 75 C N LYS 55 C O GLN 110 C O GLN 90 C N GLN 104 C N GLN 84 C O GLN 121 C O GLN 101 C N LYS 124 C N LYS 104 C O MSE 129 C O MSE 109 C N LEU 134 C N LEU 114 C O LEU 142 C O LEU 122 D N SER 45 D N SER 25 D O VAL 52 D O VAL 32 D N PHE 55 D N PHE 35 D O THR 62 D O THR 42 D N TRP 65 D N TRP 45 D O MSE 74 D O MSE 54 D N THR 77 D N THR 57 D O TRP 108 D O TRP 88 D N GLN 104 D N GLN 84 D O GLN 121 D O GLN 101 D N LYS 124 D N LYS 104 D O MSE 129 D O MSE 109 D N LEU 134 D N LEU 114 D O LEU 142 D O LEU 122 1 B CG MSE 127 B CG MSE 107 1 Y 1 B SE MSE 127 B SE MSE 107 1 Y 1 B CE MSE 127 B CE MSE 107 1 Y 1 D GLY 0 D GLY 1 1 Y 1 A LYS 48 61.98 -123.32 1 A GLU 80 71.69 -39.42 1 A ASN 152 37.39 55.30 1 B LYS 48 59.59 -120.53 1 B GLU 80 67.70 -37.74 1 B TYR 151 -129.01 -52.77 1 C LYS 48 61.92 -123.96 1 C GLU 80 69.16 -37.51 1 D LYS 48 56.83 -122.76 1 D GLU 80 69.60 -37.47 193.970 58.5116 26.630 5.2001 0.0000 0.0000 5.2001 0.0000 -10.4003 0.9331 0.9235 1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR RESTRAINT REPRESENTATION (-AUTONCS). 0.2135 0.1964 0.1972 2.4000 29.410 2400 47455 5.0600 99.9900 1.000 0.370 RANDOM 1 THROUGHOUT 0.000 SAD 0.368 2.4000 29.410 284 4741 0 0 4457 2061 SINUSOIDAL 2.000 137 HARMONIC 2.000 670 HARMONIC 5.000 4665 HARMONIC 20.000 604 SEMIHARMONIC 5.000 5120 SEMIHARMONIC 4.000 0.010 4665 HARMONIC 2.000 1.040 6396 HARMONIC 2.000 3.360 2.890 0.2336 0.2105 0.2117 2.4600 181 3280 3461 20 5.2300 99.9900 52.511 2.40 29.410 4HBR 47503 47503 0.102 1 11.600 7.400 99.900 0.722 2.40 2.46 2.6 25878 3468 0.722 1 7.5 100.0 0.651 2.46 2.53 2.9 25188 3364 0.651 1 7.5 100.0 0.562 2.53 2.60 3.2 24832 3316 0.562 1 7.5 100.0 0.397 2.60 2.68 4.3 23986 3210 0.397 1 7.5 100.0 0.320 2.68 2.77 5.2 23065 3078 0.320 1 7.5 100.0 0.268 2.77 2.87 6.1 22613 3014 0.268 1 7.5 100.0 0.227 2.87 2.98 7.0 21728 2912 0.227 1 7.5 100.0 0.164 2.98 3.10 9.0 20922 2790 0.164 1 7.5 100.0 0.127 3.10 3.24 10.8 20207 2698 0.127 1 7.5 100.0 0.101 3.24 3.39 13.5 19061 2561 0.101 1 7.4 100.0 0.089 3.39 3.58 16.0 18433 2474 0.089 1 7.5 100.0 0.084 3.58 3.79 18.0 17356 2335 0.084 1 7.4 100.0 0.080 3.79 4.06 19.5 16242 2184 0.080 1 7.4 100.0 0.067 4.06 4.38 21.9 15030 2024 0.067 1 7.4 100.0 0.059 4.38 4.80 24.1 13997 1895 0.059 1 7.4 100.0 0.063 4.80 5.37 23.7 12815 1740 0.063 1 7.4 100.0 0.090 5.37 6.20 22.1 11112 1526 0.090 1 7.3 100.0 0.092 6.20 7.59 21.9 9264 1303 0.092 1 7.1 100.0 0.067 7.59 10.73 27.1 7225 1040 0.067 1 6.9 99.9 0.063 10.73 29.41 27.7 3576 571 0.063 1 6.3 95.0 model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing Eric de La Fortelle sharp-develop@globalphasing.com http://www.globalphasing.com/sharp/ SHARP package data scaling Phil Evans pre@mrc-lmb.cam.ac.uk SCALA package 3.3.20 refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER-TNT program 2.10.0 data reduction MOSFLM phasing SHELXD refinement BUSTER 2.10.0 Crystal structure of a putative periplasmic proteins (BACEGG_01429) from Bacteroides eggerthii DSM 20697 at 2.40 A resolution 1 N N 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N A PRO 25 A PRO 5 HELX_P A TYR 36 A TYR 16 1 1 12 A THR 81 A THR 61 HELX_P A VAL 85 A VAL 65 5 2 5 A PRO 86 A PRO 66 HELX_P A SER 96 A SER 76 1 3 11 A GLY 155 A GLY 135 HELX_P A LEU 160 A LEU 140 1 4 6 B PRO 25 B PRO 5 HELX_P B TYR 36 B TYR 16 1 5 12 B THR 81 B THR 61 HELX_P B VAL 85 B VAL 65 5 6 5 B PRO 86 B PRO 66 HELX_P B SER 96 B SER 76 1 7 11 B GLY 155 B GLY 135 HELX_P B LEU 160 B LEU 140 1 8 6 C PRO 25 C PRO 5 HELX_P C TYR 36 C TYR 16 1 9 12 C THR 81 C THR 61 HELX_P C VAL 85 C VAL 65 5 10 5 C PRO 86 C PRO 66 HELX_P C SER 96 C SER 76 1 11 11 C GLY 155 C GLY 135 HELX_P C LEU 160 C LEU 140 1 12 6 D PRO 25 D PRO 5 HELX_P D TYR 36 D TYR 16 1 13 12 D THR 81 D THR 61 HELX_P D VAL 85 D VAL 65 5 14 5 D PRO 86 D PRO 66 HELX_P D SER 96 D SER 76 1 15 11 D GLY 155 D GLY 135 HELX_P D LEU 160 D LEU 140 1 16 6 covale 1.346 both A LYS 34 A C LYS 14 1_555 A MSE 35 A N MSE 15 1_555 covale 1.359 both A MSE 35 A C MSE 15 1_555 A TYR 36 A N TYR 16 1_555 covale 1.329 both A VAL 56 A C VAL 36 1_555 A MSE 57 A N MSE 37 1_555 covale 1.332 both A MSE 57 A C MSE 37 1_555 A ASN 58 A N ASN 38 1_555 covale 1.330 both A VAL 73 A C VAL 53 1_555 A MSE 74 A N MSE 54 1_555 covale 1.332 both A MSE 74 A C MSE 54 1_555 A LYS 75 A N LYS 55 1_555 covale 1.346 both A ASN 126 A C ASN 106 1_555 A MSE 127 A N MSE 107 1_555 covale 1.355 both A MSE 127 A C MSE 107 1_555 A GLN 128 A N GLN 108 1_555 covale 1.347 both A GLN 128 A C GLN 108 1_555 A MSE 129 A N MSE 109 1_555 covale 1.345 both A MSE 129 A C MSE 109 1_555 A LYS 130 A N LYS 110 1_555 covale 1.348 both B LYS 34 B C LYS 14 1_555 B MSE 35 B N MSE 15 1_555 covale 1.363 both B MSE 35 B C MSE 15 1_555 B TYR 36 B N TYR 16 1_555 covale 1.330 both B VAL 56 B C VAL 36 1_555 B MSE 57 B N MSE 37 1_555 covale 1.360 both B MSE 57 B C MSE 37 1_555 B ASN 58 B N ASN 38 1_555 covale 1.332 both B VAL 73 B C VAL 53 1_555 B MSE 74 B N MSE 54 1_555 covale 1.333 both B MSE 74 B C MSE 54 1_555 B LYS 75 B N LYS 55 1_555 covale 1.348 both B ASN 126 B C ASN 106 1_555 B MSE 127 B N MSE 107 1_555 covale 1.364 both B MSE 127 B C MSE 107 1_555 B GLN 128 B N GLN 108 1_555 covale 1.352 both B GLN 128 B C GLN 108 1_555 B MSE 129 B N MSE 109 1_555 covale 1.342 both B MSE 129 B C MSE 109 1_555 B LYS 130 B N LYS 110 1_555 covale 1.341 both C LYS 34 C C LYS 14 1_555 C MSE 35 C N MSE 15 1_555 covale 1.336 both C MSE 35 C C MSE 15 1_555 C TYR 36 C N TYR 16 1_555 covale 1.330 both C VAL 56 C C VAL 36 1_555 C MSE 57 C N MSE 37 1_555 covale 1.333 both C MSE 57 C C MSE 37 1_555 C ASN 58 C N ASN 38 1_555 covale 1.341 both C VAL 73 C C VAL 53 1_555 C MSE 74 C N MSE 54 1_555 covale 1.328 both C MSE 74 C C MSE 54 1_555 C LYS 75 C N LYS 55 1_555 covale 1.351 both C ASN 126 C C ASN 106 1_555 C MSE 127 C N MSE 107 1_555 covale 1.368 both C MSE 127 C C MSE 107 1_555 C GLN 128 C N GLN 108 1_555 covale 1.352 both C GLN 128 C C GLN 108 1_555 C MSE 129 C N MSE 109 1_555 covale 1.350 both C MSE 129 C C MSE 109 1_555 C LYS 130 C N LYS 110 1_555 covale 1.353 both D LYS 34 D C LYS 14 1_555 D MSE 35 D N MSE 15 1_555 covale 1.354 both D MSE 35 D C MSE 15 1_555 D TYR 36 D N TYR 16 1_555 covale 1.341 both D VAL 56 D C VAL 36 1_555 D MSE 57 D N MSE 37 1_555 covale 1.349 both D MSE 57 D C MSE 37 1_555 D ASN 58 D N ASN 38 1_555 covale 1.324 both D VAL 73 D C VAL 53 1_555 D MSE 74 D N MSE 54 1_555 covale 1.347 both D MSE 74 D C MSE 54 1_555 D LYS 75 D N LYS 55 1_555 covale 1.348 both D ASN 126 D C ASN 106 1_555 D MSE 127 D N MSE 107 1_555 covale 1.375 both D MSE 127 D C MSE 107 1_555 D GLN 128 D N GLN 108 1_555 covale 1.349 both D GLN 128 D C GLN 108 1_555 D MSE 129 D N MSE 109 1_555 covale 1.336 both D MSE 129 D C MSE 109 1_555 D LYS 130 D N LYS 110 1_555 Structural Genomics, Unknown Function beta lactamase like fold, DUF2874, PF11396 family protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION B7AGA3_9BACE UNP 1 22 B7AGA3 GYAPDSVQIALKKMYPTAAGIAWSQDKAYYVADFVMNGFDTRVWFTPDAEWVMKQTDWETLDEVPAAVFNAFAASEFSDG VVQNVTWVQFPEWQPIVAIQVGKPNMQMKYQILFTPKGEVLRQQNITNAYNTLGASTFL 22 160 4HBR 22 160 B7AGA3 A 1 2 140 22 160 4HBR 22 160 B7AGA3 B 1 2 140 22 160 4HBR 22 160 B7AGA3 C 1 2 140 22 160 4HBR 22 160 B7AGA3 D 1 2 140 1 expression tag GLY 0 4HBR A B7AGA3 UNP 1 2 expression tag GLY 0 4HBR B B7AGA3 UNP 1 3 expression tag GLY 0 4HBR C B7AGA3 UNP 1 4 expression tag GLY 0 4HBR D B7AGA3 UNP 1 8 8 8 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ALA 43 A ALA 23 A ASP 47 A ASP 27 A TYR 50 A TYR 30 A MSE 57 A MSE 37 A PHE 60 A PHE 40 A PHE 66 A PHE 46 A TRP 72 A TRP 52 A ASP 78 A ASP 58 A VAL 102 A VAL 82 A GLN 110 A GLN 90 A ILE 117 A ILE 97 A LYS 124 A LYS 104 A MSE 129 A MSE 109 A PHE 135 A PHE 115 A VAL 141 A VAL 121 A ASN 146 A ASN 126 B ALA 43 B ALA 23 B ASP 47 B ASP 27 B TYR 50 B TYR 30 B MSE 57 B MSE 37 B PHE 60 B PHE 40 B PHE 66 B PHE 46 B TRP 72 B TRP 52 B ASP 78 B ASP 58 B VAL 102 B VAL 82 B GLN 110 B GLN 90 B ILE 117 B ILE 97 B LYS 124 B LYS 104 B MSE 129 B MSE 109 B PHE 135 B PHE 115 B VAL 141 B VAL 121 B ASN 146 B ASN 126 C ALA 43 C ALA 23 C ASP 47 C ASP 27 C TYR 50 C TYR 30 C MSE 57 C MSE 37 C PHE 60 C PHE 40 C PHE 66 C PHE 46 C TRP 72 C TRP 52 C ASP 78 C ASP 58 C VAL 102 C VAL 82 C GLN 110 C GLN 90 C ILE 117 C ILE 97 C LYS 124 C LYS 104 C MSE 129 C MSE 109 C PHE 135 C PHE 115 C VAL 141 C VAL 121 C ASN 146 C ASN 126 D ALA 43 D ALA 23 D ASP 47 D ASP 27 D TYR 50 D TYR 30 D MSE 57 D MSE 37 D PHE 60 D PHE 40 D PHE 66 D PHE 46 D TRP 72 D TRP 52 D ASP 78 D ASP 58 D VAL 102 D VAL 82 D GLN 110 D GLN 90 D ILE 117 D ILE 97 D LYS 124 D LYS 104 D MSE 129 D MSE 109 D PHE 135 D PHE 115 D VAL 141 D VAL 121 D ASN 146 D ASN 126 154 P 32 2 1